Miyakogusa Predicted Gene

Lj2g3v0914960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0914960.1 Non Chatacterized Hit- tr|I1KZF6|I1KZF6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.67,0,seg,NULL;
coiled-coil,NULL,CUFF.35731.1
         (944 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58100.1 | Symbols:  | unknown protein; INVOLVED IN: pollen e...  1288   0.0  
AT3G28720.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    77   8e-14

>AT5G58100.1 | Symbols:  | unknown protein; INVOLVED IN: pollen
           exine formation; EXPRESSED IN: 19 plant structures;
           EXPRESSED DURING: 8 growth stages; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131
           proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr5:23507828-23514863 FORWARD LENGTH=945
          Length = 945

 Score = 1288 bits (3334), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/945 (64%), Positives = 739/945 (78%), Gaps = 3/945 (0%)

Query: 3   LRNFSL-NRRQWQLHLAVAT-LLFLAVSSLGSPVETHKRARSSVFSLFNLKEKSRFWSEN 60
           +R F   NR   +L L +   +LF+   S G+     K A+SSVFSLFNL++KSRFWSE+
Sbjct: 1   MRRFGAGNRSVSKLVLTICVAILFIPSLSYGASQGNRKTAKSSVFSLFNLRDKSRFWSES 60

Query: 61  VIHNDFDDLNFSSRGKASAFNYTNAGSIANYLKLQEVDSIYVPVPMNFIFIGFEGKGNQE 120
           V   DFDDL  S    +   NYT +G+IA+YL+L EVDS+Y+PVP+NFIFIGFEGKGNQ+
Sbjct: 61  VFRTDFDDLESSVHSNSGVLNYTKSGNIASYLELMEVDSVYLPVPVNFIFIGFEGKGNQD 120

Query: 121 FKLLPEEIERWFTKIDHIFEHTRIRQ-EDVISAFYKTSAGKMQRHHLPVASHINYNFSVH 179
           FKL PEE+ERWF K+DH+FEHTR+ Q ++V++ FYK +  K  +HHLP+ S +NYNFSVH
Sbjct: 121 FKLRPEELERWFNKLDHMFEHTRVPQIKEVLNPFYKINIEKEVQHHLPIISRVNYNFSVH 180

Query: 180 AIEMGEKVTSIFERALNVFGRKNNPLGSGDNDVGDWQVDVDMIDGVLTSLVEYLQLEKAY 239
           AI+MGEKVTS+ E A+ V  RK++   + D +    QVD +M++ + TSLVEY  LE AY
Sbjct: 181 AIQMGEKVTSVIEHAIKVLARKDDVATNKDEESALLQVDAEMMEFIFTSLVEYFHLEDAY 240

Query: 240 NIFILNPKRDERMPKYGYRRGLSEPEMNLLKENKTLQMKLLQSEGVPESILALPKIQRPL 299
           N+FILNPK D +  KYGYRRG SE E++ LKENK +   LLQS    E+ILA   +++PL
Sbjct: 241 NLFILNPKHDNKKAKYGYRRGFSESEISYLKENKEILKNLLQSGKPSENILAFDMVRKPL 300

Query: 300 YAKHPMMKFAWTRAEETEIVEWYNIWLDALDNYGRLYQGSDPAKILEXXXXXXXXXXXXX 359
           Y +HPM+KF+WT AEET+  EW+N   DAL+   +L  G D A++++             
Sbjct: 301 YDRHPMLKFSWTNAEETDTAEWFNACQDALNKLEQLSLGKDAAELIQSKVLQLLRGKNED 360

Query: 360 XXXXXERVLKSGDYSGFQAECLTDTWIGKDRWAFIDLSAGPFSWGPAVGGEGVRTEASLP 419
                E+ L++GD+S   AECLTD WIGK RWAFIDL+AGPFSWGP+VGGEGVRTE SLP
Sbjct: 361 MKVFLEKDLRAGDFSNLNAECLTDIWIGKGRWAFIDLTAGPFSWGPSVGGEGVRTELSLP 420

Query: 420 NVEKTVGSTLEISAEEAEDRLQDAIQEKFSVFGDKDHQAIDILLAEIDIYELFAFKHCKG 479
           NV  T+G+  EIS +EAED+LQ AIQ+KFSVFG+ DHQA+DILLAEID+YELFAFKHCKG
Sbjct: 421 NVGTTIGAVAEISEDEAEDKLQTAIQDKFSVFGENDHQAVDILLAEIDVYELFAFKHCKG 480

Query: 480 RKVKLALCEELDERMRDLRNELQSFEGEEYDESHKTKAIEALKRMESWNLFSDTNEESQN 539
           RKVKLALCEELDERMRDL+ ELQSF+GEEYDE+HK KA++AL+RMESWNLFSD  EE QN
Sbjct: 481 RKVKLALCEELDERMRDLKTELQSFDGEEYDETHKRKAMDALRRMESWNLFSDEREEFQN 540

Query: 540 YTVARDTFLAHLGATLWGSMRHIVSPSVADGVFHYYEKISFQLFFITQEKVRHIKQLPVD 599
           YTVARDTFLAHLGATLWGSMRHI+SPSVADG FH+YEKISFQL FITQEKVR IKQLPVD
Sbjct: 541 YTVARDTFLAHLGATLWGSMRHIISPSVADGAFHHYEKISFQLVFITQEKVRQIKQLPVD 600

Query: 600 VDAIKEGLSSLMVPSQKPMFSPHMLPLSEDPXXXXXXXXXXXXXXXXXXXXNGTYRKTTR 659
           + A+ +GLSSL++PSQKP+FS HML LSEDP                    NGTYRKT R
Sbjct: 601 LKALMDGLSSLLLPSQKPLFSQHMLTLSEDPALAMAFSVARRAAAVPLLLVNGTYRKTVR 660

Query: 660 TYLDSAILQYQLQRLNKHGSLKGGHAHSRSTLEVPVFWFIYNEPLLLDKHFQAKALSDMI 719
           +YLDS+ILQYQLQR+N H SLKGGHAHSRSTLE+P+FW I  +PLL+DKH+QAKALS+M+
Sbjct: 661 SYLDSSILQYQLQRVNDHTSLKGGHAHSRSTLEIPIFWLISGDPLLIDKHYQAKALSNMV 720

Query: 720 IVVQSDPSSWESHLHCNGNSLLMNLRQPIKAAVAATAEHLAGLLPLHLVYGQAHETAIED 779
           +VVQS+ SSWESHL CNG SLL +LR P+KAA+A+ AEHLAGLLPLHLVY  AHE+AIED
Sbjct: 721 VVVQSEASSWESHLQCNGRSLLWDLRSPVKAAMASVAEHLAGLLPLHLVYSVAHESAIED 780

Query: 780 WIWSVGCNPFSITSQGWHISQFQSDSIARSYVITTLEESIQLVNSAIHLLLMERTTEKTF 839
           W WSVGCNPFS+TSQGW +SQFQSD+IARSY+IT LEESIQ VNS IHLL +ERT +KTF
Sbjct: 781 WTWSVGCNPFSVTSQGWLLSQFQSDTIARSYMITALEESIQAVNSGIHLLRLERTNKKTF 840

Query: 840 KIFQSQEHELVNKYNYVVSLWRRVSTVTGELRYVDALRLLNTLEDASKRFTEQVNTTVSL 899
           K+FQS+E EL+NKY YVVSLWRR+S V GE RY DA+R L+TLE+A+  F  +VN TV +
Sbjct: 841 KLFQSRERELMNKYKYVVSLWRRLSNVAGETRYGDAMRFLHTLEEATSSFVREVNATVGV 900

Query: 900 LHPINCTRDRKIHVVFDMTTIPAFFVVLGCLYMVLRPRRPKPKIN 944
           LHPI+CT++RK+ V  DMTTIPAF +VL  LY VLRPR PKPKIN
Sbjct: 901 LHPIHCTKERKVKVEVDMTTIPAFIIVLILLYAVLRPRAPKPKIN 945


>AT3G28720.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 25 plant
           structures; EXPRESSED DURING: 13 growth stages; BEST
           Arabidopsis thaliana protein match is: unknown protein
           (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins
           in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95;
           Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes
           - 732 (source: NCBI BLink). | chr3:10782276-10784339
           FORWARD LENGTH=687
          Length = 687

 Score = 76.6 bits (187), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 691 LEVPVFWFIYNEPLLLDKHFQAKALSDMIIVVQSDPSSWESHLHCNGNSLLMNLRQPIKA 750
           L V VF    N PLLLD++ Q+ A  DM+I V++  +   S   CNG  + ++ R   + 
Sbjct: 435 LPVYVFDLDINTPLLLDRYHQSVAFRDMVIAVRTRGTQTVSDYTCNGRHVFVHTRDLERP 494

Query: 751 AVAATAEHLAGLLPLHLVYGQAHETAIEDWIWSVGCNPFSITSQGWHISQFQSDSIARSY 810
            V +  + + G+   HL +   H T + D+ WS+G  PF   S    +S  Q D+  R+ 
Sbjct: 495 LVGSILQSMWGVSSTHLTWSPRHNTTLVDYTWSIGQTPFGPFSDISSLSFVQKDAAKRNV 554

Query: 811 VI----TTLEESIQLVNSAI 826
           ++    TT+  +I +++SA+
Sbjct: 555 ILTSLNTTITSAIDVIDSAV 574



 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 14/137 (10%)

Query: 371 GDYSGFQAECLTDTWIGKDRWAFIDLSAGPFSWGPAVGGEGVRTEASLPNVEKTVGSTLE 430
           GD S    +CL   W GKDR+ +IDLSAGP  +GPA+ G+GV     LP      G    
Sbjct: 222 GDSSAGFTKCLGSIWTGKDRYLWIDLSAGPVDYGPALSGDGV-----LPR-----GEFHP 271

Query: 431 ISAEEAEDRLQDAIQEKFSVFGDKDHQAIDILLAEIDIY----ELFAFKHCKGRKVKLAL 486
           ++A     + + A+    +      +Q + +    I +Y     +  F H  G +VK + 
Sbjct: 272 LAALHGRPKSEKALLADLASLVYNAYQVLIVPSLRIPVYFEDTLVVQFIHVYGSEVKDSS 331

Query: 487 CEELDERMRDLRNELQS 503
             +L+   R   +E +S
Sbjct: 332 GLDLEFVKRTFMDEAES 348