Miyakogusa Predicted Gene
- Lj2g3v0911630.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0911630.2 Non Chatacterized Hit- tr|I1KJU7|I1KJU7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9413 PE=,90.22,0,POLLEN
SPECIFIC PROTEIN SF21,Pollen specific protein SF21; N-MYC DOWNSTREAM
REGULATED,Ndr; alpha/bet,CUFF.35634.2
(552 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59830 similar to UniRef100_A7PEA8 Cluster: Chromosome... 515 e-146
gnl|LJGI|TC58490 similar to UniRef100_A7P4I7 Cluster: Chromosome... 98 7e-20
gnl|LJGI|TC66897 similar to UniRef100_A7P4I7 Cluster: Chromosome... 74 1e-12
>gnl|LJGI|TC59830 similar to UniRef100_A7PEA8 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1488
Score = 515 bits (260), Expect = e-146
Identities = 479/552 (86%)
Strand = Plus / Plus
Query: 1 atgtgtatgggagtaatggctggtgcttatatcctttctttatttgcaattaaatatagg 60
|||||||||||||||| |||||||||||| |||||| || | |||||||| |||||||||
Sbjct: 501 atgtgtatgggagtaacggctggtgcttacatccttactctttttgcaatgaaatatagg 560
Query: 61 gagcgtgttcttgggttaatacttgtatctcccttatgcaaagctccttcatggagtgaa 120
|| |||||| |||| |||||||| |||||||||||||||||||| ||||| |||| ||||
Sbjct: 561 gaacgtgttgttggtttaatactcgtatctcccttatgcaaagcaccttcttggactgaa 620
Query: 121 tggttttacaacaaggtcatgtcaaatttgttatattactatggtgtatgcggcttgctg 180
||||| || |||||||| ||||| ||||||||||||| ||| || | | ||||||||
Sbjct: 621 tggttatataacaaggtaatgtcgaatttgttatatttctacggcatgagtggcttgctc 680
Query: 181 aaggagtgtttgctccagagatacttcagcaaggacgttcgtggtaatgctgaagttccg 240
|||||||||||||||||| | |||||||||||||||||||| ||||| | |||||||||
Sbjct: 681 aaggagtgtttgctccagcggtacttcagcaaggacgttcgaggtaacgttgaagttcca 740
Query: 241 gaatcagagctagttcaagcttgtagaaaactgctggatgagagaaagagcatcaatgtc 300
||||||||| |||| ||||||||||||||| |||| || |||||||| || | ||||||
Sbjct: 741 gaatcagagatagtccaagcttgtagaaaattgctagacgagagaaaaagaacaaatgtc 800
Query: 301 tttcggtttcttcatgctattaatgagagacctgatataacagatggattgaagacgtta 360
|| |||||||||| || |||||| |||| |||||| | ||||| |||||||| | |||
Sbjct: 801 ttaaggtttcttcaagcaattaatcagaggcctgatctgacagaaggattgaaaagatta 860
Query: 361 aaatgtcgaacgcttatttttgtcggggacagttctcctttccattcggaggctattcac 420
|| || || |||||||||||||| || |||||||||||||||||||| |||||| | |||
Sbjct: 861 aagtgccgcacgcttatttttgtaggtgacagttctcctttccattccgaggctctccac 920
Query: 421 atgacttcaaaacttgataggagatatagtgccttggttgaggtccaggcttgtggatcc 480
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 921 atgacttcaaaacttgataggagatttagtgccttggttgaggtccaggcttgtggatca 980
Query: 481 atggttacagaggaacaaccacatgcaatgctgattcccatggagtatttcttaatgggt 540
||||||||||| ||||| ||||||||||||||||| || ||||||| || | |||||
Sbjct: 981 atggttacagaagaacagccacatgcaatgctgatacctttggagtactttctcatgggg 1040
Query: 541 tatggattgtac 552
||||| ||||||
Sbjct: 1041 tatgggttgtac 1052
>gnl|LJGI|TC58490 similar to UniRef100_A7P4I7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (82%)
Length = 1224
Score = 97.6 bits (49), Expect = 7e-20
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 1 atgtgtatgggagtaatggctggtgcttatatcctttctttatttgcaattaaatatagg 60
|||||||||||||||| |||||| ||||| || ||| | |||||||| || || |||||
Sbjct: 377 atgtgtatgggagtaacggctggagcttacattcttaccttatttgctatgaagtataga 436
Query: 61 gagcgtgttcttgggttaatacttgtatctcccttatgcaaagctccttcatggagtgaa 120
|| ||||||||||| || |||||||| ||||| | || ||||| || || |||| ||||
Sbjct: 437 gaacgtgttcttggtttgatacttgtttctcctctttgtaaagcaccatcttggactgaa 496
Query: 121 tggttttacaacaaggtcatgtcaaattt 149
||||| |||||||||||| |||| |||||
Sbjct: 497 tggttgtacaacaaggtcttgtcgaattt 525
Score = 73.8 bits (37), Expect = 1e-12
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 376 atttttgtcggggacagttctcctttccattcggaggctattcacatgacttcaaaactt 435
|||||||| ||||||| |||||||| || || |||||| | ||||||| ||| || |
Sbjct: 752 atttttgttggggacatgtctccttttcactctgaggctctccacatgaattctaagtta 811
Query: 436 gataggagatatagtgccttggttgaggtccaggcttgtggatccatggttacagaggaa 495
||||| ||| |||||||||||| ||||| || |||||||| || ||||| ||||||||
Sbjct: 812 gatagacgatttagtgccttggtcgaggttcaagcttgtgggtcgatggtaacagaggag 871
Query: 496 caaccacatgcaatgct 512
||||| ||||| |||||
Sbjct: 872 caaccccatgcgatgct 888
>gnl|LJGI|TC66897 similar to UniRef100_A7P4I7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 1035
Score = 73.8 bits (37), Expect = 1e-12
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 376 atttttgtcggggacagttctcctttccattcggaggctattcacatgacttcaaaactt 435
|||||||| ||||||| |||||||| || || |||||| | ||||||| ||| || |
Sbjct: 140 atttttgttggggacatgtctccttttcactctgaggctctccacatgaattctaagtta 199
Query: 436 gataggagatatagtgccttggttgaggtccaggcttgtggatccatggttacagaggaa 495
||||| ||| |||||||||||| ||||| || |||||||| || ||||| ||||||||
Sbjct: 200 gatagacgatttagtgccttggtcgaggttcaagcttgtgggtcgatggtaacagaggag 259
Query: 496 caaccacatgcaatgct 512
||||| ||||| |||||
Sbjct: 260 caaccccatgcgatgct 276