Miyakogusa Predicted Gene

Lj2g3v0777450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0777450.1 CUFF.35427.1
         (170 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g467540.3 | CAAX amino terminal protease family protein | ...   110   8e-25
Medtr8g467540.2 | CAAX amino terminal protease family protein | ...   110   9e-25
Medtr8g467540.1 | CAAX amino terminal protease family protein | ...   110   9e-25

>Medtr8g467540.3 | CAAX amino terminal protease family protein | HC
           | chr8:24295730-24289349 | 20130731
          Length = 293

 Score =  110 bits (274), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 55/117 (47%), Positives = 72/117 (61%), Gaps = 2/117 (1%)

Query: 56  RLRSSQTLH--LFISSRKSKTKLQAHQRDFGPDWPILRRWEVPWQWQTFSLTSIACALSL 113
           RL S + L    F +SR +K+  +   +D   +WPILRRWEVPW+WQT SLTS+AC L  
Sbjct: 46  RLNSKRILPSVCFFNSRDNKSDTKLQDQDSRSEWPILRRWEVPWEWQTVSLTSLACGLGF 105

Query: 114 VLTVWLEVNALQSLEAEGDELSSDEEAVIFLVNHGFATAIVLQVLYGITNMYQPLPQ 170
           VLT   E  AL  L    D LS DE+A +  ++ G  TA VL ++Y + N YQPLP+
Sbjct: 106 VLTGLAEATALPYLGIRPDMLSLDEKAELLFIDQGITTAAVLGIIYSVFNTYQPLPE 162


>Medtr8g467540.2 | CAAX amino terminal protease family protein | HC
           | chr8:24295728-24287936 | 20130731
          Length = 338

 Score =  110 bits (274), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 55/117 (47%), Positives = 72/117 (61%), Gaps = 2/117 (1%)

Query: 56  RLRSSQTLH--LFISSRKSKTKLQAHQRDFGPDWPILRRWEVPWQWQTFSLTSIACALSL 113
           RL S + L    F +SR +K+  +   +D   +WPILRRWEVPW+WQT SLTS+AC L  
Sbjct: 46  RLNSKRILPSVCFFNSRDNKSDTKLQDQDSRSEWPILRRWEVPWEWQTVSLTSLACGLGF 105

Query: 114 VLTVWLEVNALQSLEAEGDELSSDEEAVIFLVNHGFATAIVLQVLYGITNMYQPLPQ 170
           VLT   E  AL  L    D LS DE+A +  ++ G  TA VL ++Y + N YQPLP+
Sbjct: 106 VLTGLAEATALPYLGIRPDMLSLDEKAELLFIDQGITTAAVLGIIYSVFNTYQPLPE 162


>Medtr8g467540.1 | CAAX amino terminal protease family protein | HC
           | chr8:24295707-24281408 | 20130731
          Length = 338

 Score =  110 bits (274), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 55/117 (47%), Positives = 72/117 (61%), Gaps = 2/117 (1%)

Query: 56  RLRSSQTLH--LFISSRKSKTKLQAHQRDFGPDWPILRRWEVPWQWQTFSLTSIACALSL 113
           RL S + L    F +SR +K+  +   +D   +WPILRRWEVPW+WQT SLTS+AC L  
Sbjct: 46  RLNSKRILPSVCFFNSRDNKSDTKLQDQDSRSEWPILRRWEVPWEWQTVSLTSLACGLGF 105

Query: 114 VLTVWLEVNALQSLEAEGDELSSDEEAVIFLVNHGFATAIVLQVLYGITNMYQPLPQ 170
           VLT   E  AL  L    D LS DE+A +  ++ G  TA VL ++Y + N YQPLP+
Sbjct: 106 VLTGLAEATALPYLGIRPDMLSLDEKAELLFIDQGITTAAVLGIIYSVFNTYQPLPE 162