Miyakogusa Predicted Gene

Lj2g3v0660300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0660300.1 Non Characterized Hit- tr|K4BCH1|K4BCH1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.69,6e-18,zf-4CXXC_R1,Zinc-finger domain of monoamine-oxidase
A repressor R1; seg,NULL,CUFF.35177.1
         (283 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g070950.1 | zinc-finger of monoamine-oxidase A repressor R...   342   3e-94
Medtr5g018400.1 | zinc-finger of monoamine-oxidase A repressor R...    80   2e-15
Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor ...    73   3e-13
Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R...    72   6e-13
Medtr5g018470.1 | zinc-finger of monoamine-oxidase A repressor R...    72   6e-13
Medtr4g087240.1 | zinc-finger of monoamine-oxidase A repressor R...    72   6e-13

>Medtr6g070950.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr6:26179564-26176501 | 20130731
          Length = 278

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 179/277 (64%), Positives = 200/277 (72%), Gaps = 18/277 (6%)

Query: 3   RVIERPKSEYESLRNARMLENQARLESLGILNKVSQLRQQASAAQTKKPPRPYRKRVYGL 62
           ++ E  KS+YESLRNARM EN+ARLESLGILNKVS LR+  ++  TKK  R   KRVYGL
Sbjct: 2   KMKETSKSDYESLRNARMSENKARLESLGILNKVSNLRE--ASTPTKKQQRTPVKRVYGL 59

Query: 63  TPLRRSQRINXXXXXXXXXXXXXXVXXXXXXXXXXXXIPTSL-PKQETVTLREGGEE--- 118
           TP+RRSQRI                               ++ PKQE VT   G EE   
Sbjct: 60  TPVRRSQRIKDVSTGTVTVAATLDGLLPRRSNRLKSSFSYAVTPKQEKVTAENGEEEEKG 119

Query: 119 ----------EKRPANAPLVEL--KNVELYILAENSARRCHSKGRGSVYNGVLGICCHFC 166
                     EKRPANAPL+EL  K+VE ++ AE SARRC SKGRGS+YN VLGICCHFC
Sbjct: 120 CIVTTDKWEDEKRPANAPLIELNPKDVEHFLSAETSARRCDSKGRGSIYNPVLGICCHFC 179

Query: 167 RQKKLCGEEDCKRCGKCDVDEPCLGKTDCSVCHSSTGVFCRACLKVRYGEEIEEVRENKG 226
           RQKKLCGEEDCKRCG CDV+EPCLGKTDCS CHSS GVFCRACLKVRYGEE+EEVRENK 
Sbjct: 180 RQKKLCGEEDCKRCGNCDVNEPCLGKTDCSACHSSNGVFCRACLKVRYGEEMEEVRENKE 239

Query: 227 WMCPHCIEEKGINPYWICNSSVCLRKRKMPPTGLAIY 263
           WMCPHCIEEKGI PYWICNSS+C+RKRKM PTG+AI+
Sbjct: 240 WMCPHCIEEKGIKPYWICNSSICMRKRKMSPTGIAIH 276


>Medtr5g018400.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr5:6858343-6862565 | 20130731
          Length = 385

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 108/272 (39%), Gaps = 47/272 (17%)

Query: 10  SEYESLRNARMLENQARLESLGILNKVSQLRQQASAAQTKKPPRPYRKRVYGLTPLRRSQ 69
           SEYE  R  R+ EN  R+  LGIL+    L+ + +   +++ P    K    L P   S+
Sbjct: 29  SEYELSREERIRENHERMGKLGILDISLSLKLKPNPP-SRRTPSNNPKSPISLNPSGPSR 87

Query: 70  RINXXXXXXXXXXXXXXVXXXXXXXXXXXXIPTSLPKQETVTLREGGEEEKRPANAPLVE 129
           R +              V            I    P+ E  T     E EK   N     
Sbjct: 88  RSSRLQNVAPISYSEAQVKGEKREKSTRIVIREG-PQPEIYT----KEHEKLLGNTE--- 139

Query: 130 LKNVELYI--LAENSARRCHSKGRGSVYNGVLGICCHFCRQKKLCGEEDCKRCGKCDVDE 187
            K  EL++  + ++  R         +Y+ V G  CH CRQK L                
Sbjct: 140 -KTWELFVDGVGKDGKR---------IYDSVQGKSCHQCRQKTLGY-------------- 175

Query: 188 PCLGKTDCSVCHSSTGVFCRACLKVRYGEEIEEVRENKGWMCPHCIEEKGINPYWICNSS 247
               +T C  CH   G FC  CL +RYGE + E   +  W CP C          ICN S
Sbjct: 176 ----RTRCCECHMGQGQFCGDCLYMRYGEHVIEALADPTWKCPRC--------RGICNCS 223

Query: 248 VCLRKRKMPPTGLAIYQAREMGYKSVAHLLME 279
           +C + +   PTG    +  ++GYKSVAH L++
Sbjct: 224 LCRKAKGWEPTGNLYRKVLQLGYKSVAHYLIQ 255


>Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor R1
           | LC | scaffold0024:150614-158393 | 20130731
          Length = 735

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 59/126 (46%), Gaps = 27/126 (21%)

Query: 154 VYNGVLGICCHFCRQKKLCGEEDCK--RCGKCDVDEPCLGKTDCSVCHSSTGVFCRACLK 211
           +Y+   G  CH CRQK       CK  R GK     PC  +            FC  CL 
Sbjct: 37  IYDSANGKTCHQCRQKTRDFSAACKNPRTGK-----PCQIR------------FCHKCLL 79

Query: 212 VRYGEEIEEVRENKGWMCPHCIEEKGINPYWICNSSVCLRKRKMPPTGLAIYQAREMGYK 271
            RYGE+ EEV     WMCP C          ICN S C++KR   PTG+ ++ A+  G+ 
Sbjct: 80  NRYGEKAEEVELLNDWMCPKC--------RGICNCSFCMKKRGEQPTGILVHSAKASGFN 131

Query: 272 SVAHLL 277
           SV+ +L
Sbjct: 132 SVSAML 137


>Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr6:6917300-6911610 | 20130731
          Length = 634

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 68/141 (48%), Gaps = 31/141 (21%)

Query: 143 ARRCHSKG----RGSVYNGVLGICCHFCRQKKLCGEEDCK--RCGKCDVDEPCLGKTDCS 196
           +RR +S+G       +Y+   G  CH CRQK +     CK  R GK     PC+ +    
Sbjct: 31  SRRNNSRGVRVIGNRIYDSENGKSCHQCRQKTMDFSAACKNPRGGK-----PCVIR---- 81

Query: 197 VCHSSTGVFCRACLKVRYGEEIEEVRENKGWMCPHCIEEKGINPYWICNSSVCLRKRKMP 256
                   FC  CL  RYGE+ EEV     W CP C   KGI     CN S C++ R   
Sbjct: 82  --------FCHKCLLNRYGEKAEEVDLLNDWNCPKC---KGI-----CNCSRCMKNRGHQ 125

Query: 257 PTGLAIYQAREMGYKSVAHLL 277
           PTG+ ++ A+  GY SV+ +L
Sbjct: 126 PTGILVHSAKASGYNSVSAML 146


>Medtr5g018470.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr5:6887294-6892209 | 20130731
          Length = 416

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 59/126 (46%), Gaps = 26/126 (20%)

Query: 154 VYNGVLGICCHFCRQKKLCGEEDCKRCGKCDVDEPCLGKTDCSVCHSSTGVFCRACLKVR 213
           +Y+ V G  CH CRQK L                    +T C  C+   G FC  CL +R
Sbjct: 158 IYDSVQGKTCHQCRQKTLGY------------------RTRCCECNIVQGQFCGDCLYMR 199

Query: 214 YGEEIEEVRENKGWMCPHCIEEKGINPYWICNSSVCLRKRKMPPTGLAIYQAREMGYKSV 273
           YGE + E   +  W CP C   +G     ICN S+C   +   PTG    +  ++GYKSV
Sbjct: 200 YGEHVLEALADPTWKCPPC---RG-----ICNCSICRNAKGWEPTGNLYRKVLQLGYKSV 251

Query: 274 AHLLME 279
           AH L++
Sbjct: 252 AHYLIQ 257


>Medtr4g087240.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr4:34198862-34202754 | 20130731
          Length = 319

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 104/279 (37%), Gaps = 47/279 (16%)

Query: 2   GRVIERPKSEYESLRNARMLENQARLESLGILNKVSQLRQQASAAQTKKPPRPYRKR--V 59
           G V+    S YE +R  RM EN  R+  LG+L     L++          PRP  K+  +
Sbjct: 39  GVVVSGSSSHYERIREQRMEENAERMHKLGLLKLSGNLKKTPK-------PRPSVKKNSL 91

Query: 60  YGLTPLRRSQRINXXXXXXXXXXXXXXVXXXXXXXXXXXXIPTSLPKQETVTLREGGEEE 119
                 RRS R++                           +   +P+     +    E E
Sbjct: 92  PSNESERRSSRLSTLPPVNYCSKRPKAERQESSSSKKRKEVEIHIPEGTNPEVYTE-EHE 150

Query: 120 KRPANAPLVELKNVELYILAENSARRCHSKGRGSVYNGVLGICCHFCRQKKLCGEEDCKR 179
           K   +       + ELY+         + +    +Y+   G              E C +
Sbjct: 151 KLLGDCET----DWELYVDG-------YDEDGDHIYDPTKG--------------EKCHQ 185

Query: 180 CGKCDVDEPCLGKTDCSVCHSSTGVFCRACLKVRYGEEIEEVRENKGWMCPHCIEEKGIN 239
           CG+  V +     TDC+ C    G  C  CL  RYGE + E   N  W CP C E     
Sbjct: 186 CGRLTVAQ----LTDCNKCELPQGRLCGDCLYTRYGENVTEANINPKWTCPSCRE----- 236

Query: 240 PYWICNSSVCLRKRKMPPTGLAIYQAREMGYKSVAHLLM 278
              ICN + C RK    PTG    +  ++G+KSVAH L+
Sbjct: 237 ---ICNCNSCRRKNGWLPTGNIYNKVTKLGFKSVAHYLI 272