Miyakogusa Predicted Gene

Lj2g3v0660300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0660300.1 Non Chatacterized Hit- tr|K4BCH1|K4BCH1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.69,6e-18,zf-4CXXC_R1,Zinc-finger domain of monoamine-oxidase
A repressor R1; seg,NULL,CUFF.35177.1
         (283 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37110.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    88   8e-18
AT2G23530.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    82   5e-16
AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    72   4e-13
AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    67   1e-11
AT5G38690.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    65   4e-11

>AT4G37110.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 | chr4:17484343-17486197 REVERSE LENGTH=417
          Length = 417

 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 65/134 (48%), Gaps = 26/134 (19%)

Query: 146 CHSKGRGSVYNGVLGICCHFCRQKKLCGEEDCKRCGKCDVDEPCLGKTDCSVCHSSTGVF 205
           C   G+  +Y+ V G CCH CRQK L     C +C                  HS  G F
Sbjct: 167 CDKNGK-RIYDPVRGKCCHQCRQKTLGYHTQCSQCN-----------------HSVRGQF 208

Query: 206 CRACLKVRYGEEIEEVRENKGWMCPHCIEEKGINPYWICNSSVCLRKRKMPPTGLAIYQA 265
           C  CL +RYGE + E  EN  W+CP C +        ICN S C  K+   PTG A  + 
Sbjct: 209 CGDCLYMRYGEHVLEALENPDWICPVCRD--------ICNCSFCRTKKGWLPTGAAYRKI 260

Query: 266 REMGYKSVAHLLME 279
            ++GYKSVAH L++
Sbjct: 261 HKLGYKSVAHYLIQ 274


>AT2G23530.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 | chr2:10020652-10022804 REVERSE LENGTH=552
          Length = 552

 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 118/299 (39%), Gaps = 88/299 (29%)

Query: 4   VIERPK-SEYESLRNARMLENQARLESLGILNKVSQLRQQASAAQTKKPPRPYRKRVYG- 61
           + E PK S YE  R  R+ EN  R+ +LG+LN   +L+ +          RP  KR YG 
Sbjct: 22  IKETPKVSLYEQCREERIKENLQRMNNLGLLNLSRKLKPKT---------RPV-KRSYGN 71

Query: 62  ----------LTPLRRSQRINXXXXXXXXXXXXXXVXXXXXXXXXXXXIPTSLPKQETVT 111
                     L P RRS R+                               + P   T  
Sbjct: 72  RNSVQNPTPPLQPSRRSSRLE-----------------------------NTTPVIYTDG 102

Query: 112 LREGGEEEKRPANAPLVELKNVELYI-----LAENSARRC------HSKGRGSVYNGVLG 160
           + E G++  +  +  + E    E+Y      L  N+ R        + K    +Y+   G
Sbjct: 103 INEKGKKASKRESVVIGEGIRAEIYTEEHEKLLGNTERSWTCFVDGYDKNGKRIYDPFNG 162

Query: 161 ICCHFCRQKKLCGEEDCKRCGKCDVDEPCLGKTDCSVCHSSTGVFCRACLKVRYGEEIEE 220
             CH CRQK +                    +T CS C+   G FC  CL +RYGE + E
Sbjct: 163 KTCHQCRQKTMGH------------------RTQCSECNLVQGQFCGDCLFMRYGEHVLE 204

Query: 221 VRENKGWMCPHCIEEKGINPYWICNSSVCLRKRKMPPTGLAIYQAREMGYKSVAHLLME 279
             EN  W+CP C   +G     ICN S+C   +   PTG    +   +GYKSVAH L++
Sbjct: 205 ALENPDWICPAC---RG-----ICNCSLCRNNKGWVPTGPIYRRIAALGYKSVAHYLIQ 255


>AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr1:25412816-25415530 FORWARD
           LENGTH=512
          Length = 512

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 61/126 (48%), Gaps = 23/126 (18%)

Query: 152 GSVYNGVLGICCHFCRQKKLCGEEDCKRCGKCDVDEPCLGKTDCSVCHSSTGVFCRACLK 211
           G +Y+   G  CH CRQK +     CK   K   D+ C            T  FC  CL 
Sbjct: 24  GRIYDSSNGKTCHQCRQKTMDFVASCKAMKK---DKQC------------TINFCHKCLI 68

Query: 212 VRYGEEIEEVRENKGWMCPHCIEEKGINPYWICNSSVCLRKRKMPPTGLAIYQAREMGYK 271
            RYGE  EEV +   W+CP C   +G     ICN S C +KR + PTG+  ++A+  G  
Sbjct: 69  NRYGENAEEVAKLDDWICPQC---RG-----ICNCSFCRKKRGLNPTGILAHKAKASGLA 120

Query: 272 SVAHLL 277
           SV+ LL
Sbjct: 121 SVSMLL 126


>AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr1:25183177-25185793 REVERSE
           LENGTH=541
          Length = 541

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 59/127 (46%), Gaps = 23/127 (18%)

Query: 154 VYNGVLGICCHFCRQKKLCGEEDCKRCGKCDVDEPCLGKTDCSVCHSSTGVFCRACLKVR 213
           +Y+   G  CH CRQK L            D   PC       +C      FC  CL +R
Sbjct: 18  IYDSQNGKSCHQCRQKTL------------DFAAPCKAMRRKKLCPIK---FCYKCLSIR 62

Query: 214 YGEEIEEVRENKGWMCPHCIEEKGINPYWICNSSVCLRKRKMPPTGLAIYQAREMGYKSV 273
           YGE  EEV +   W+CP C   +G     IC  SVC + + + PTG+  ++A+  GY SV
Sbjct: 63  YGENAEEVAKLDDWICPLC---RG-----ICICSVCRKAQGLEPTGILAHEAKARGYSSV 114

Query: 274 AHLLMEE 280
             LL  E
Sbjct: 115 YALLEAE 121


>AT5G38690.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr5:15479424-15482992 REVERSE
           LENGTH=572
          Length = 572

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 23/128 (17%)

Query: 150 GRGSVYNGVLGICCHFCRQKKLCGEEDCKRCGKCDVDEPCLGKTDCSVCHSSTGVFCRAC 209
           G   + +   G  CH CRQK+             D+   C+ K     C       C  C
Sbjct: 19  GVSRIEDSTNGKTCHQCRQKR------------TDLVGSCVTKKKDKTCPIK---LCTKC 63

Query: 210 LKVRYGEEIEEVRENKGWMCPHCIEEKGINPYWICNSSVCLRKRKMPPTGLAIYQAREMG 269
           +  RYGE  +EV   K W+CP C   +G      CN S C++KR   PTG+ ++ A++ G
Sbjct: 64  ILNRYGENAQEVALKKDWICPKC---RGN-----CNCSYCMKKRGQKPTGILVHTAKKTG 115

Query: 270 YKSVAHLL 277
           + SV+ LL
Sbjct: 116 FSSVSELL 123