Miyakogusa Predicted Gene
- Lj2g3v0660300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0660300.1 Non Chatacterized Hit- tr|K4BCH1|K4BCH1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.69,6e-18,zf-4CXXC_R1,Zinc-finger domain of monoamine-oxidase
A repressor R1; seg,NULL,CUFF.35177.1
(849 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74651 similar to UniRef100_A4IR42 Cluster: DNA intern... 876 0.0
gnl|LJGI|BW610688 similar to UniRef100_A9S1H9 Cluster: Predicted... 686 0.0
gnl|LJGI|AV426846 similar to UniRef100_A7PHB1 Cluster: Chromosom... 579 e-164
>gnl|LJGI|TC74651 similar to UniRef100_A4IR42 Cluster: DNA internalization-related
competence protein ComEC; n=1; Geobacillus
thermodenitrificans NG80-2|Rep: DNA
internalization-related competence protein ComEC -
Geobacillus thermodenitrificans (strain NG80-2), partial
(3%)
Length = 528
Score = 876 bits (442), Expect = 0.0
Identities = 442/442 (100%)
Strand = Plus / Minus
Query: 1 atggggagggtgattgagagacccaaatctgagtacgaatctctcagaaatgctcgcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atggggagggtgattgagagacccaaatctgagtacgaatctctcagaaatgctcgcatg 383
Query: 61 ttagagaaccaggctcggttggaatctctgggaattttgaataaagtttcacagcttcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttagagaaccaggctcggttggaatctctgggaattttgaataaagtttcacagcttcga 323
Query: 121 caacaagcctctgctgctcaaaccaagaaacctcctcgcccctatcgcaaaagggtctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 caacaagcctctgctgctcaaaccaagaaacctcctcgcccctatcgcaaaagggtctac 263
Query: 181 ggtctcacccctttgcgccgctcccagcgaatcaacgccacaactactgccgccaccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggtctcacccctttgcgccgctcccagcgaatcaacgccacaactactgccgccaccagc 203
Query: 241 ccagctgctgctaaagccgttttacagcgacgctctcagcgtttgacgaggagttcaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ccagctgctgctaaagccgttttacagcgacgctctcagcgtttgacgaggagttcaatc 143
Query: 301 cccacttcgctccctaaacaagagacggtaactttacgtgaagggggagaagaggagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 cccacttcgctccctaaacaagagacggtaactttacgtgaagggggagaagaggagaag 83
Query: 361 cggcctgccaatgcacctctcgttgaactgaagaatgtagagctttacattttagcagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 cggcctgccaatgcacctctcgttgaactgaagaatgtagagctttacattttagcagag 23
Query: 421 aattctgctcggcgctgccata 442
||||||||||||||||||||||
Sbjct: 22 aattctgctcggcgctgccata 1
>gnl|LJGI|BW610688 similar to UniRef100_A9S1H9 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(5%)
Length = 469
Score = 686 bits (346), Expect = 0.0
Identities = 346/346 (100%)
Strand = Plus / Plus
Query: 1 atggggagggtgattgagagacccaaatctgagtacgaatctctcagaaatgctcgcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atggggagggtgattgagagacccaaatctgagtacgaatctctcagaaatgctcgcatg 183
Query: 61 ttagagaaccaggctcggttggaatctctgggaattttgaataaagtttcacagcttcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttagagaaccaggctcggttggaatctctgggaattttgaataaagtttcacagcttcga 243
Query: 121 caacaagcctctgctgctcaaaccaagaaacctcctcgcccctatcgcaaaagggtctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 caacaagcctctgctgctcaaaccaagaaacctcctcgcccctatcgcaaaagggtctac 303
Query: 181 ggtctcacccctttgcgccgctcccagcgaatcaacgccacaactactgccgccaccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggtctcacccctttgcgccgctcccagcgaatcaacgccacaactactgccgccaccagc 363
Query: 241 ccagctgctgctaaagccgttttacagcgacgctctcagcgtttgacgaggagttcaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ccagctgctgctaaagccgttttacagcgacgctctcagcgtttgacgaggagttcaatc 423
Query: 301 cccacttcgctccctaaacaagagacggtaactttacgtgaagggg 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cccacttcgctccctaaacaagagacggtaactttacgtgaagggg 469
>gnl|LJGI|AV426846 similar to UniRef100_A7PHB1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 427
Score = 579 bits (292), Expect = e-164
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 558 tgagccctgcctaggaaagactgattgttcggtctgtcactccagcacaggtgttttctg 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagccctgcctaggaaagactgattgttcggtctgtcactccagcacaggtgttttctg 60
Query: 618 cagagcctgtctcaaggttcggtatggtgaagaaatagaggaggtaagagagaacaaggg 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagagcctgtctcaaggttcggtatggtgaagaaatagaggaggtaagagagaacaaggg 120
Query: 678 atggatgtgcccacattgcattgaagagaaaggaataaacccctactggatatgcaacag 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggatgtgcccacattgcattgaagagaaaggaataaacccctactggatatgcaacag 180
Query: 738 ttcagtatgtctgaggaaacggaagatgcctccaactgggctagcaatataccaagctag 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcagtatgtctgaggaaacggaagatgcctccaactgggctagcaatataccaagctag 240
Query: 798 ggaaatgggatacaaatcagtggcacatctactaatggaagagcttaaacgt 849
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaatgggatacaaatcagtggcacatctactaatggaagagcttaaacgt 292