Miyakogusa Predicted Gene

Lj2g3v0621310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0621310.1 Non Characterized Hit- tr|I1L3W8|I1L3W8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,96.34,0,seg,NULL;
eRF1_2,eRF1 domain 2; eRF1_3,eRF1 domain 3; eRF1_1,eRF1 domain
1/Pelota-like; no descripti,CUFF.34869.1
         (437 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g478120.1 | eukaryotic peptide chain release factor subuni...   838   0.0  
Medtr7g084860.1 | eukaryotic peptide chain release factor subuni...   799   0.0  
Medtr4g103720.1 | eukaryotic peptide chain release factor subuni...   771   0.0  
Medtr6g478090.1 | eukaryotic peptide chain release factor subuni...   329   4e-90
Medtr4g103730.1 | eukaryotic peptide chain release factor subuni...   254   9e-68
Medtr6g081000.1 | eukaryotic peptide chain release factor subuni...   187   1e-47
Medtr7g109660.1 | eukaryotic peptide chain release factor subuni...    98   2e-20

>Medtr6g478120.1 | eukaryotic peptide chain release factor subunit
           1-3 | HC | chr6:28918839-28923534 | 20130731
          Length = 436

 Score =  838 bits (2166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/435 (91%), Positives = 417/435 (95%)

Query: 1   MVDAHETDKNIEVWXXXXXXXXXXXXRGNGTSMISLIMPPRDQVARVTKMLGDEFGTASN 60
           M DAH+TDKNIEVW            RGNGTSMISLIMPPRDQ+ARVTKMLGDEFGTASN
Sbjct: 1   MADAHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 60

Query: 61  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120
           IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFRPIN
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 120

Query: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180
           ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 240
           RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 241 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG 300
           DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EIL+NVKFIQEKRLIGKYFEEISQDTG
Sbjct: 241 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 301 KYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKHYNKAEDADQSNFRD 360
           KYVFGVDDTL+AL+ GAVETLIVWENLDMNRYVLKN+ TGE+VIKH+NK ++A QSNFRD
Sbjct: 301 KYVFGVDDTLQALDAGAVETLIVWENLDMNRYVLKNSTTGEVVIKHFNKEQEAKQSNFRD 360

Query: 361 PESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420
           PE++ADYEVQEK SLL+WFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361 PETAADYEVQEKTSLLDWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 421 RSFDEFSDDGGVYED 435
           R+FD+FSDDGGVYED
Sbjct: 421 RTFDDFSDDGGVYED 435


>Medtr7g084860.1 | eukaryotic peptide chain release factor subunit
           1-3 | HC | chr7:32766605-32762956 | 20130731
          Length = 435

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/437 (88%), Positives = 407/437 (93%), Gaps = 2/437 (0%)

Query: 1   MVDAHETDKNIEVWXXXXXXXXXXXXRGNGTSMISLIMPPRDQVARVTKMLGDEFGTASN 60
           M D  E+DKNIE+W            RGNGTSMISLIMPPRDQ++RVTKMLGDEFGTASN
Sbjct: 1   MADG-ESDKNIEIWKIKKLIKGLEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 59

Query: 61  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120
           IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTI+TEDGKEKKVT DFEPF+PIN
Sbjct: 60  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTEDGKEKKVTFDFEPFKPIN 119

Query: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180
           ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKF+VDLPKKHG
Sbjct: 120 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 179

Query: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 240
           RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 180 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQS 239

Query: 241 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG 300
           DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEIL+NVKFIQEKRLIGKYFEEISQ+TG
Sbjct: 240 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQETG 299

Query: 301 KYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKHYNKAEDADQSNFRD 360
           KYV+GVDDTLKALEMGAVETLIVWENLD+ RYVLKN  TGEIVIKH  K ++ DQSNFRD
Sbjct: 300 KYVYGVDDTLKALEMGAVETLIVWENLDITRYVLKNATTGEIVIKHLKKGQENDQSNFRD 359

Query: 361 PESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420
             +SAD EVQEK+ LLEWFANEY+RFGC+LEFVTNKSQEGSQFCRGFGGIGG+LRYQLD+
Sbjct: 360 VATSADLEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI 419

Query: 421 RSFDEFSDDGGVYEDSE 437
           RSFDE SDD  VYEDS+
Sbjct: 420 RSFDELSDD-EVYEDSD 435


>Medtr4g103720.1 | eukaryotic peptide chain release factor subunit
           1-3 | HC | chr4:42891100-42893131 | 20130731
          Length = 549

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/434 (83%), Positives = 399/434 (91%)

Query: 1   MVDAHETDKNIEVWXXXXXXXXXXXXRGNGTSMISLIMPPRDQVARVTKMLGDEFGTASN 60
           M DAH+TDKNI VW            RGNGTSMISLI+PPRDQ++RVTKML +E+GTASN
Sbjct: 1   MADAHDTDKNIGVWKIKQLMKNLEAARGNGTSMISLIIPPRDQISRVTKMLANEYGTASN 60

Query: 61  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120
           IKSRVNRQSVLGAI+SAQQRLKLYNKVPPNGLVLY GTI+T+D KEKK T DFEPFRPIN
Sbjct: 61  IKSRVNRQSVLGAISSAQQRLKLYNKVPPNGLVLYCGTILTDDEKEKKETFDFEPFRPIN 120

Query: 121 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180
           ASLYLCDNKFHTE LNE+LESDDK+GFIVMDGNGTLFGTLSGNTREVLHK++VDLPKKHG
Sbjct: 121 ASLYLCDNKFHTEPLNEILESDDKYGFIVMDGNGTLFGTLSGNTREVLHKYTVDLPKKHG 180

Query: 181 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 240
           RGGQSALRFARLR EKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELS+S
Sbjct: 181 RGGQSALRFARLRTEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSKS 240

Query: 241 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG 300
           DMFDPRLQAK+LNVVDVSYGGE GFNQAI+ S+EIL+NVKFIQEKRLI KYFEEI QDTG
Sbjct: 241 DMFDPRLQAKLLNVVDVSYGGEMGFNQAIQQSSEILSNVKFIQEKRLIEKYFEEIGQDTG 300

Query: 301 KYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKHYNKAEDADQSNFRD 360
           K V+GVDDTL+AL+ GAVETLIVWENLDM RYVLKN+ TGEIVIKH+NK ++A+QSNFRD
Sbjct: 301 KSVYGVDDTLQALDAGAVETLIVWENLDMTRYVLKNSTTGEIVIKHFNKQQEANQSNFRD 360

Query: 361 PESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420
           PE+S+DYEVQE LSL+EWFANEY++FGCTLE VTNKSQEGSQFC+GFGGIGG+LRYQLDM
Sbjct: 361 PENSSDYEVQEMLSLVEWFANEYKQFGCTLEIVTNKSQEGSQFCKGFGGIGGMLRYQLDM 420

Query: 421 RSFDEFSDDGGVYE 434
           R+FD+FSDDG   E
Sbjct: 421 RTFDDFSDDGSERE 434


>Medtr6g478090.1 | eukaryotic peptide chain release factor subunit
           1-2 | HC | chr6:28907810-28908558 | 20130731
          Length = 227

 Score =  329 bits (843), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 170/245 (69%), Positives = 198/245 (80%), Gaps = 22/245 (8%)

Query: 191 RLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAK 250
           RLR EK HNYVRKTAELA QFYINPATSQPNVSGLILA                      
Sbjct: 4   RLRTEKHHNYVRKTAELAIQFYINPATSQPNVSGLILA---------------------- 41

Query: 251 ILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTL 310
           +L +  +S   ENGFN+AI+LS+EIL+NVKFIQE RLI KYF EI+Q+TGK+V GVDDTL
Sbjct: 42  VLLISKLSLARENGFNEAIKLSSEILSNVKFIQETRLIEKYFMEINQNTGKHVVGVDDTL 101

Query: 311 KALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKHYNKAEDADQSNFRDPESSADYEVQ 370
           + L+ GAVETLIVWENLDM RYVLKN+ TGE+VIKH+NK ++A++SNFRDPES+ADYEVQ
Sbjct: 102 QDLDAGAVETLIVWENLDMTRYVLKNSTTGEVVIKHFNKEQEANESNFRDPESAADYEVQ 161

Query: 371 EKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDG 430
           EK SLLEWFANEY++FGCTL  VT++SQEGS FC+G GGIGGILRYQLDM++FDEFSDDG
Sbjct: 162 EKQSLLEWFANEYKQFGCTLVIVTDESQEGSLFCKGLGGIGGILRYQLDMKTFDEFSDDG 221

Query: 431 GVYED 435
            V +D
Sbjct: 222 DVSDD 226


>Medtr4g103730.1 | eukaryotic peptide chain release factor subunit
           1-3 | HC | chr4:42895463-42896814 | 20130731
          Length = 161

 Score =  254 bits (650), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 125/157 (79%), Positives = 136/157 (86%), Gaps = 3/157 (1%)

Query: 131 HTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFA 190
           HT+ L E   S+ KFGFIVMD NG +FGTLSGNTREVLHKF V LPKK+GRGG   LRF+
Sbjct: 6   HTDKLQE---SEAKFGFIVMDYNGAVFGTLSGNTREVLHKFVVYLPKKYGRGGVPVLRFS 62

Query: 191 RLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAK 250
           R+RMEKRHNYV+KT +LATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAK
Sbjct: 63  RVRMEKRHNYVKKTVDLATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAK 122

Query: 251 ILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRL 287
           +L VVDVSYGGE GFNQAIELS+EIL+   F QEK L
Sbjct: 123 VLGVVDVSYGGEYGFNQAIELSSEILSKANFTQEKCL 159


>Medtr6g081000.1 | eukaryotic peptide chain release factor subunit
           1-3 | LC | chr6:28897851-28898318 | 20130731
          Length = 155

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 95/153 (62%), Positives = 115/153 (75%), Gaps = 1/153 (0%)

Query: 132 TEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFAR 191
           T   ++L+ESDD FGFIVMDG GTLFGTLSGNTR+VL+ + +  PKKHGRGG+ ALRF+R
Sbjct: 4   THHADKLMESDDMFGFIVMDGEGTLFGTLSGNTRQVLYMYRLFPPKKHGRGGEPALRFSR 63

Query: 192 LRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKI 251
               K  N+ RKT ELA+  YI+P T QPNV GLILAGS ++KT     D+ DP L+ KI
Sbjct: 64  AHFLKHINHGRKTDELASMLYIDPNTRQPNVCGLILAGSVEYKTR-QLVDIIDPLLKEKI 122

Query: 252 LNVVDVSYGGENGFNQAIELSAEILANVKFIQE 284
           +NVVDVSYG ENG NQAIELS+ IL+  KF +E
Sbjct: 123 VNVVDVSYGEENGLNQAIELSSGILSKPKFAKE 155


>Medtr7g109660.1 | eukaryotic peptide chain release factor subunit
           1-1, putative | HC | chr7:44878821-44878129 | 20130731
          Length = 121

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 5/84 (5%)

Query: 35  SLIMPPRDQVARVTKML--GDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGL 92
           SL +PPR +  +VT+ L  GDEFGTASNIKS+  RQS LGAI SAQ+RLKLYNKVPPNGL
Sbjct: 16  SLFVPPRSEF-KVTESLDVGDEFGTASNIKSKGYRQSKLGAIASAQKRLKLYNKVPPNGL 74

Query: 93  VLYTGTIVTEDGKE--KKVTIDFE 114
           VLYTGTIV    K+   K ++D +
Sbjct: 75  VLYTGTIVMAGEKDVPHKYSVDLQ 98