Miyakogusa Predicted Gene

Lj2g3v0484940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0484940.1 tr|A8HND3|A8HND3_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_190138 PE=4
SV=1,54.55,3e-19,zf-CDGSH,Iron sulphur-containing domain, CDGSH-type;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.34630.1
         (118 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g32810.1                                                       181   2e-46
Glyma09g27920.1                                                       171   1e-43

>Glyma16g32810.1 
          Length = 113

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/118 (79%), Positives = 101/118 (85%), Gaps = 5/118 (4%)

Query: 1   MESVLSHVGAGFCHGITPLKRGITATHFNPSSFSGGVDCRKPRRVVLVKAEAEGVGINPD 60
           MESVLSHVGAGF +G+ P  RG+  THF  SSF G VD  +PRRVVLVKAEA  V INPD
Sbjct: 1   MESVLSHVGAGFFNGMIP--RGVLGTHFKASSFVG-VDGGRPRRVVLVKAEA--VSINPD 55

Query: 61  IRKTEAKVVDSVVITELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 118
           IRK+E KVVDSVV+TEL+KPLT YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 56  IRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 113


>Glyma09g27920.1 
          Length = 113

 Score =  171 bits (434), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 90/118 (76%), Positives = 98/118 (83%), Gaps = 5/118 (4%)

Query: 1   MESVLSHVGAGFCHGITPLKRGITATHFNPSSFSGGVDCRKPRRVVLVKAEAEGVGINPD 60
           ME VLS+VGAGFC+G+T    G+  THF  SSF G V   + RRVVLVKAEA  V INPD
Sbjct: 1   MEYVLSNVGAGFCNGMT--STGVLGTHFKASSFVG-VGGVRTRRVVLVKAEA--VSINPD 55

Query: 61  IRKTEAKVVDSVVITELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 118
           IRK+E KVVDSVV+TEL+KPLT YCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 56  IRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 113