Miyakogusa Predicted Gene

Lj2g3v0027990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0027990.1 Non Characterized Hit- tr|E1Z7D2|E1Z7D2_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,42.17,0.0000000002, ,CUFF.34087.1
         (145 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g068660.1 | hypothetical protein | HC | chr5:29080068-2908...   243   4e-65
Medtr3g093320.1 | hypothetical protein | HC | chr3:42648775-4264...   180   5e-46

>Medtr5g068660.1 | hypothetical protein | HC |
           chr5:29080068-29083036 | 20130731
          Length = 147

 Score =  243 bits (620), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 117/145 (80%), Positives = 127/145 (87%), Gaps = 2/145 (1%)

Query: 1   MEVLGKSMVAGPANVIFLSSILGRDGPDPVHKCDWKCQNEHVCGNMYRCKLTGLTHICDK 60
           MEV GKSMVA P+NVI+LSSILG DGP PVHKCDWKCQNE V GNM+RCKLTGLTHICDK
Sbjct: 1   MEVYGKSMVAAPSNVIYLSSILGHDGPSPVHKCDWKCQNESVWGNMFRCKLTGLTHICDK 60

Query: 61  NCNQRILYDNHSSLCRASGQVFPLTPTEEQAVRGVRRKLDADNSP--TDSCGFKRRREAQ 118
           NCNQRILYDNHSSLC AS Q+FPLTPTEEQAVRGVRRKLDA  S    ++ G KRRR+AQ
Sbjct: 61  NCNQRILYDNHSSLCLASRQIFPLTPTEEQAVRGVRRKLDAAESSHVDNNGGCKRRRDAQ 120

Query: 119 LHPSPFEKSFSAVNPICSQVADGMD 143
            HPSPFE+SF+AV+PICSQV DGMD
Sbjct: 121 FHPSPFERSFTAVSPICSQVGDGMD 145


>Medtr3g093320.1 | hypothetical protein | HC |
           chr3:42648775-42649216 | 20130731
          Length = 119

 Score =  180 bits (456), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/145 (66%), Positives = 102/145 (70%), Gaps = 26/145 (17%)

Query: 1   MEVLGKSMVAGPANVIFLSSILGRDGPDPVHKCDWKCQNEHVCGNMYRCKLTGLTHICDK 60
           MEV GKS+ A PAN I+LSSIL      P   C        V GNMYRCKLTGLTHICDK
Sbjct: 1   MEVYGKSVAAAPANAIYLSSIL-----VPKRTC-------FVFGNMYRCKLTGLTHICDK 48

Query: 61  NCNQRILYDNHSSLCRASGQVFPLTPTEEQAVRGVRRKLDADNSPTDSCGFKRRREAQLH 120
           NCNQRILYDNHSSLCRASGQ+FPLTPTEEQAVRGV   L               R+ Q H
Sbjct: 49  NCNQRILYDNHSSLCRASGQIFPLTPTEEQAVRGVLGSLI--------------RDTQRH 94

Query: 121 PSPFEKSFSAVNPICSQVADGMDMS 145
           PSPFEKSFSAV+PICSQV DGMDMS
Sbjct: 95  PSPFEKSFSAVSPICSQVGDGMDMS 119