Miyakogusa Predicted Gene
- Lj1g3v5062760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v5062760.1 Non Characterized Hit- tr|I1NCU5|I1NCU5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50672
PE,79.54,0,La,RNA-binding protein Lupus La; no description,Winged
helix-turn-helix transcription repressor DNA-,CUFF.34060.1
(445 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g117595.1 | LA-related protein 6 LA RNA-binding domain pro... 523 e-148
Medtr7g117595.3 | LA-related protein 6 LA RNA-binding domain pro... 481 e-136
Medtr7g117595.2 | LA-related protein 6 LA RNA-binding domain pro... 368 e-102
Medtr4g086860.1 | LA-related protein 6 LA RNA-binding domain pro... 241 9e-64
Medtr2g019620.1 | LA-related protein 6 LA RNA-binding domain pro... 202 5e-52
Medtr1g026890.1 | RNA recognition motif protein | HC | chr1:8835... 69 1e-11
Medtr8g071890.1 | hydrolase of sodium-potassium ATPase alpha sub... 63 5e-10
Medtr8g071890.2 | hydrolase of sodium-potassium ATPase alpha sub... 63 5e-10
Medtr5g057940.1 | hypothetical protein | HC | chr5:23916116-2391... 62 1e-09
Medtr1g025920.1 | LA-related protein 6 LA RNA-binding domain pro... 62 1e-09
Medtr8g075120.1 | LA-related protein 6 LA RNA-binding domain pro... 62 1e-09
Medtr5g057940.2 | hypothetical protein | HC | chr5:23916116-2392... 61 2e-09
Medtr5g088200.1 | LA-related protein 2 LA RNA-binding domain pro... 59 1e-08
Medtr5g022790.1 | ATP synthase, A subunit | HC | chr5:9032818-90... 57 5e-08
Medtr1g025920.2 | LA-related protein 6 LA RNA-binding domain pro... 57 5e-08
Medtr3g114450.1 | LA-related protein 6 LA RNA-binding domain pro... 57 5e-08
Medtr3g114340.1 | LA-related protein 6 LA RNA-binding domain pro... 56 6e-08
Medtr5g022790.2 | ATP synthase, A subunit | HC | chr5:9031583-90... 56 6e-08
Medtr5g022790.3 | ATP synthase, A subunit | HC | chr5:9031583-90... 56 7e-08
>Medtr7g117595.1 | LA-related protein 6 LA RNA-binding domain
protein, putative | HC | chr7:48763422-48774734 |
20130731
Length = 440
Score = 523 bits (1347), Expect = e-148, Method: Compositional matrix adjust.
Identities = 279/372 (75%), Positives = 299/372 (80%), Gaps = 21/372 (5%)
Query: 82 VHYRSHHHPQQYYVSSDSGLQQVQQSQVDPDHPPSSKTK-LSDEA-GQKILNQVEYYFSD 139
VHYRSHH QY Q+V+Q P+H SSKTK SDE KIL QVEYYFSD
Sbjct: 82 VHYRSHH---QY------PPQEVEQ----PEHTSSSKTKPHSDEQPHHKILKQVEYYFSD 128
Query: 140 LNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHITSHSQLATVLRNSSKLVVSEDGKK 199
LNLATTDHLMRFINKDPEGFVPISVVASFKKIKA ITSHSQLA VLRNSSKLVVSEDGKK
Sbjct: 129 LNLATTDHLMRFINKDPEGFVPISVVASFKKIKALITSHSQLANVLRNSSKLVVSEDGKK 188
Query: 200 IKRQCPLTESDIEELQSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTTNSGAS 259
IKRQ TESDIEELQSRIV+AENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQT+N+G S
Sbjct: 189 IKRQYSPTESDIEELQSRIVIAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTSNNGTS 248
Query: 260 SASRLGKVDGMPLSNKLHAFIEYESVELAERAVAELNDEGNWRSGLRVRLMLRRVSKPAQ 319
SASR GKVDG+PL NKLHAF+EYESVELAERAV ELNDEGNWRSGLRVRLMLRR SKP
Sbjct: 249 SASRSGKVDGIPLHNKLHAFVEYESVELAERAVTELNDEGNWRSGLRVRLMLRRTSKPTP 308
Query: 320 GRGKKGLDVEVGCEEDHTSVPELQADDKQLEDASIPEIQPHEHVGEEHGYDKEX-XXXXX 378
GRG+KGLDVEV CEED+TSVPE Q ++K+LEDAS P+ Q HEH GEEHGY+KE
Sbjct: 309 GRGRKGLDVEVSCEEDYTSVPEPQTNEKELEDASFPDAQLHEHAGEEHGYEKESGQRKGG 368
Query: 379 XXXXXXXXXXXVHCHQ-NNRVN-HLGTPSSHNSILTDQ--VVAKQ-PPGPRMPDGTRGFS 433
VHCHQ NNR N HLGT S++S TDQ V AKQ PPGPRMP+GTRGFS
Sbjct: 369 RGRGRTKGRGRVHCHQNNNRANHHLGTSPSNSSFFTDQQVVAAKQPPPGPRMPNGTRGFS 428
Query: 434 MGRGKPISVNIV 445
MGRGKP++VNI
Sbjct: 429 MGRGKPVAVNIA 440
>Medtr7g117595.3 | LA-related protein 6 LA RNA-binding domain
protein, putative | HC | chr7:48763422-48774734 |
20130731
Length = 424
Score = 481 bits (1237), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/372 (70%), Positives = 283/372 (76%), Gaps = 37/372 (9%)
Query: 82 VHYRSHHHPQQYYVSSDSGLQQVQQSQVDPDHPPSSKTK-LSDEA-GQKILNQVEYYFSD 139
VHYRSHH QY Q+V+Q P+H SSKTK SDE KIL QVEYYFSD
Sbjct: 82 VHYRSHH---QY------PPQEVEQ----PEHTSSSKTKPHSDEQPHHKILKQVEYYFSD 128
Query: 140 LNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHITSHSQLATVLRNSSKLVVSEDGKK 199
LNLATTDHLMRFINKDPEGFVPISVVASFKKIKA ITSHSQLA VLRNSSKLVVSEDGKK
Sbjct: 129 LNLATTDHLMRFINKDPEGFVPISVVASFKKIKALITSHSQLANVLRNSSKLVVSEDGKK 188
Query: 200 IKRQCPLTESDIEELQSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTTNSGAS 259
IKRQ TESDIEELQSRIV+AENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQT+N+G S
Sbjct: 189 IKRQYSPTESDIEELQSRIVIAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTSNNGTS 248
Query: 260 SASRLGKVDGMPLSNKLHAFIEYESVELAERAVAELNDEGNWRSGLRVRLMLRRVSKPAQ 319
SASR GKVDG+PL NK V ELNDEGNWRSGLRVRLMLRR SKP
Sbjct: 249 SASRSGKVDGIPLHNK----------------VTELNDEGNWRSGLRVRLMLRRTSKPTP 292
Query: 320 GRGKKGLDVEVGCEEDHTSVPELQADDKQLEDASIPEIQPHEHVGEEHGYDKEX-XXXXX 378
GRG+KGLDVEV CEED+TSVPE Q ++K+LEDAS P+ Q HEH GEEHGY+KE
Sbjct: 293 GRGRKGLDVEVSCEEDYTSVPEPQTNEKELEDASFPDAQLHEHAGEEHGYEKESGQRKGG 352
Query: 379 XXXXXXXXXXXVHCHQ-NNRVN-HLGTPSSHNSILTDQ--VVAKQ-PPGPRMPDGTRGFS 433
VHCHQ NNR N HLGT S++S TDQ V AKQ PPGPRMP+GTRGFS
Sbjct: 353 RGRGRTKGRGRVHCHQNNNRANHHLGTSPSNSSFFTDQQVVAAKQPPPGPRMPNGTRGFS 412
Query: 434 MGRGKPISVNIV 445
MGRGKP++VNI
Sbjct: 413 MGRGKPVAVNIA 424
>Medtr7g117595.2 | LA-related protein 6 LA RNA-binding domain
protein, putative | HC | chr7:48763422-48773797 |
20130731
Length = 363
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/238 (81%), Positives = 202/238 (84%), Gaps = 15/238 (6%)
Query: 82 VHYRSHHHPQQYYVSSDSGLQQVQQSQVDPDHPPSSKTK-LSDEA-GQKILNQVEYYFSD 139
VHYRSHH QY Q+V+Q P+H SSKTK SDE KIL QVEYYFSD
Sbjct: 82 VHYRSHH---QY------PPQEVEQ----PEHTSSSKTKPHSDEQPHHKILKQVEYYFSD 128
Query: 140 LNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHITSHSQLATVLRNSSKLVVSEDGKK 199
LNLATTDHLMRFINKDPEGFVPISVVASFKKIKA ITSHSQLA VLRNSSKLVVSEDGKK
Sbjct: 129 LNLATTDHLMRFINKDPEGFVPISVVASFKKIKALITSHSQLANVLRNSSKLVVSEDGKK 188
Query: 200 IKRQCPLTESDIEELQSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTTNSGAS 259
IKRQ TESDIEELQSRIV+AENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQT+N+G S
Sbjct: 189 IKRQYSPTESDIEELQSRIVIAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTSNNGTS 248
Query: 260 SASRLGKVDGMPLSNKLHAFIEYESVELAERAVAELNDEGNWRSGLRVRLMLRRVSKP 317
SASR GKVDG+PL NKLHAF+EYESVELAERAV ELNDEGNWRSGLRVRLMLRR P
Sbjct: 249 SASRSGKVDGIPLHNKLHAFVEYESVELAERAVTELNDEGNWRSGLRVRLMLRRTVYP 306
>Medtr4g086860.1 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr4:34040137-34037050 | 20130731
Length = 404
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 190/329 (57%), Gaps = 20/329 (6%)
Query: 114 PPSSKTKLSDEAGQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKA 173
P SK L+ + QKI+ QVEY FSDL+L + + +NKDPEG+VPI+V+AS KKIK+
Sbjct: 88 PNCSKNVLNPDLQQKIVKQVEYQFSDLSLLANESFQKQMNKDPEGYVPITVIASTKKIKS 147
Query: 174 HITSHSQLATVLRNSSKLVVSEDGKKIKRQCPLTESDIEELQSRIVVAENLPEDHCHQNL 233
+ + L +R+SSKLV+S DGKK+KR+ P E + EEL SR VVAENLP+DH HQNL
Sbjct: 148 LVNNIHLLTQAIRHSSKLVLSADGKKVKRKHPFAEKEKEELMSRTVVAENLPDDHSHQNL 207
Query: 234 MKVFSAVGSVKTIRTCPPQTTNSGASSASRLGKVDGMPLSNKLHAFIEYESVELAERAVA 293
K+F VGS+KTIR C PQ NS L +SNKLHA +EYES ++A++AV
Sbjct: 208 QKIFGVVGSIKTIRICHPQEPNSSRPKGDFL-------ISNKLHALVEYESSDVADKAVE 260
Query: 294 ELNDEGNWRSGLRVRLMLRRVSKPAQGRGKKGLDVEVGCEEDHTSVPELQADDKQLEDAS 353
+LNDE NWR G+RVRL+LR K K D + +E+ S + ED+S
Sbjct: 261 KLNDERNWRKGMRVRLLLRCSPKSVLKNRKSEFDGYLDDDENLHS--------ETAEDSS 312
Query: 354 IPEIQPHEHVGEEHGYDKEXXXXXXXXXXXXXXXXXVHCHQNNRVNHLGTPSSHNSILTD 413
P E E +G + H + L PS +S++
Sbjct: 313 HP--NNTELCVESNGDETSVGSKKGWTRGRGKGRGRTQNHTGRGL--LAPPSPSSSVVLG 368
Query: 414 QVVAK-QPPGPRMPDGTRGFSMGRGKPIS 441
+V K GPRMPDGTRGF++GRGKPIS
Sbjct: 369 EVSTKPNAKGPRMPDGTRGFAIGRGKPIS 397
>Medtr2g019620.1 | LA-related protein 6 LA RNA-binding domain
protein, putative | HC | chr2:6438990-6443888 | 20130731
Length = 406
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 192/341 (56%), Gaps = 40/341 (11%)
Query: 110 DPDHPPSSKTKLSDEAGQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFK 169
+PDH + L D+ KI+ QVEYYFSD NL T +++ + ++ EGFVPI +ASF+
Sbjct: 89 EPDHVAETVVSL-DDLKLKIIKQVEYYFSDENLPTDKYMLSLVKRNKEGFVPIPAIASFR 147
Query: 170 KIKAHITSHSQLATVLRNSSKLVVSEDGKKIKRQCPLTESDIEELQSRIVVAENLPEDHC 229
K+K H +A L+ SS LVVS DGK++KR PL +++++ + V+AENLPEDH
Sbjct: 148 KMKRLTRDHLFIAAALKESSLLVVSGDGKRVKRLNPLRFNEVKDHKLYTVLAENLPEDHS 207
Query: 230 HQNLMKVFSAVGSVKTIRTCPPQTTNSGASSASRLGKVDGMPLSNKLHAFIEYESVELAE 289
+N+ ++F G++K + P++T A+SA + K D + +KLHA +EYE++E AE
Sbjct: 208 RENIRQIFQIAGNIKKLTINDPRST---AASAKHI-KQDKF-IGSKLHALVEYETIEGAE 262
Query: 290 RAVAELNDEGNWRSGLRVRLMLRRVSKPAQGR-----------GKKGLDVEVGCEEDHTS 338
+AVA LN+E +WR+G+RV+ + R K Q + G + + G EE+H S
Sbjct: 263 KAVAMLNNEEDWRNGMRVKFLSRMAVKYVQKKQPLKGSNSEKNGSSHVSEKTGDEENHGS 322
Query: 339 VPELQADDKQLEDASIPEIQPHEHVGEEHGYDKEXXXXXXXXXXXXXXXXXVHCHQNNRV 398
+ ED +P ++ EHV ++ G + N +
Sbjct: 323 -------HEHRED--MPVVEDGEHVSKDKGGQRNSKQGRSRKQK---------YRATNGM 364
Query: 399 NHLGTPSSHNSILTDQVVAKQPPGPRMPDGTRGFSMGRGKP 439
H GT +SI T + +K PPGP+MPDGTRGF++GRG+P
Sbjct: 365 GHGGT----SSIRTTE-PSKPPPGPKMPDGTRGFAIGRGRP 400
>Medtr1g026890.1 | RNA recognition motif protein | HC |
chr1:8835899-8830191 | 20130731
Length = 482
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 15/120 (12%)
Query: 117 SKTKLSDEAGQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHIT 176
+K L +E +K++ QVE+YFSD NL D L + +N+ +G V ++++ SF +++ H+
Sbjct: 2 AKHSLDEETTKKVIRQVEFYFSDSNLPRDDFLSKTVNESEDGMVSLALLCSFNRMRKHLK 61
Query: 177 -------------SHSQLATVLRNSSKLVVSEDGKKIKR--QCPLTESDIEELQSRIVVA 221
+ +A VL+N++ L +SEDG K+ R + P E IE+++ R + A
Sbjct: 62 LADDTKPADVKEETVKAVAEVLKNAASLKLSEDGSKVGRITELPKPEEVIEQVEIRTIAA 121
>Medtr8g071890.1 | hydrolase of sodium-potassium ATPase alpha
subunit, putative | HC | chr8:30340315-30344546 |
20130731
Length = 179
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 33/43 (76%)
Query: 215 QSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTTNSG 257
QSR VVAENLP+DH HQNL K+F+ V SVKTIR C PQ NS
Sbjct: 91 QSRTVVAENLPDDHSHQNLQKIFAIVESVKTIRICHPQEPNSS 133
>Medtr8g071890.2 | hydrolase of sodium-potassium ATPase alpha
subunit, putative | HC | chr8:30340315-30344470 |
20130731
Length = 179
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 33/43 (76%)
Query: 215 QSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTTNSG 257
QSR VVAENLP+DH HQNL K+F+ V SVKTIR C PQ NS
Sbjct: 91 QSRTVVAENLPDDHSHQNLQKIFAIVESVKTIRICHPQEPNSS 133
>Medtr5g057940.1 | hypothetical protein | HC |
chr5:23916116-23918232 | 20130731
Length = 163
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 215 QSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTTNSGASSASRLGKVDGMPLSN 274
+SR VVAENLP+DH HQNL K+F+ V SVKTIR C PQ NS L +SN
Sbjct: 56 ESRTVVAENLPDDHSHQNLQKIFAIVESVKTIRICHPQEPNSSRPKGDFL-------ISN 108
Query: 275 KLHAF--IEYESVELAERA 291
K+ I Y V LA +
Sbjct: 109 KVQKICHIPYYYVVLAVKG 127
>Medtr1g025920.1 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr1:8346097-8339214 | 20130731
Length = 546
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 62/90 (68%), Gaps = 10/90 (11%)
Query: 115 PSSKTKLSDEAGQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAH 174
P++++ LS+ I+NQ++YYFSD+NLA + L N D EG+VPI+++A+F ++K +
Sbjct: 402 PAAESSLSN----VIVNQIDYYFSDINLANDEFLKS--NMDEEGWVPITLIANFPRVK-N 454
Query: 175 ITSHSQLA-TVLRNSSKLVVSEDGKKIKRQ 203
+TS+ QL +RNS+ VV G K++R+
Sbjct: 455 LTSNIQLILDSMRNSN--VVDVQGDKLRRR 482
>Medtr8g075120.1 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr8:31755422-31758254 | 20130731
Length = 455
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 124 EAGQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHITSHSQLAT 183
E KI+NQ++YYFSDLNL +L R N D +G+VP++++A F K+K + +
Sbjct: 334 ELQTKIVNQIDYYFSDLNLNNDTYLKR--NMDDQGWVPLNLIAGFNKVKLLTDNIQIVVD 391
Query: 184 VLRNSSKLVVSEDGKKIKRQCPLTES 209
+R SS + V +D KI+R+ +T S
Sbjct: 392 AVRTSSVVEVQDD--KIRRRNWITLS 415
>Medtr5g057940.2 | hypothetical protein | HC |
chr5:23916116-23920207 | 20130731
Length = 144
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 215 QSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTTNSG 257
+SR VVAENLP+DH HQNL K+F+ V SVKTIR C PQ NS
Sbjct: 56 ESRTVVAENLPDDHSHQNLQKIFAIVESVKTIRICHPQEPNSS 98
>Medtr5g088200.1 | LA-related protein 2 LA RNA-binding domain
protein | HC | chr5:38241687-38234903 | 20130731
Length = 911
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 115 PSSKTKLSDEAGQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAH 174
P S T + IL Q+EYYFSD NL +L+ + D +G+VPIS VA FK++K
Sbjct: 304 PQSPTPETQSLRASILKQIEYYFSDENLHNDRYLIGLM--DDQGWVPISTVADFKRVKRM 361
Query: 175 ITSHSQLATVLRNSSKLVVSEDGKKIKRQ 203
T + VL+NS + V +D KI+++
Sbjct: 362 STDIPFIVDVLQNSDNVEVQDD--KIRKR 388
>Medtr5g022790.1 | ATP synthase, A subunit | HC |
chr5:9032818-9026232 | 20130731
Length = 670
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 128 KILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHITSHSQLATVLRN 187
KI+NQ++YYFS+ NL L + N D +G+VPI+++A FKK+ + + +R
Sbjct: 359 KIVNQIDYYFSNENLVKDIFLRK--NMDAQGWVPITLIAGFKKVMDLTDNIQLIIDAIRT 416
Query: 188 SSKLVVSEDGKKIKRQ 203
SS VV G KI+RQ
Sbjct: 417 SS--VVEVQGDKIRRQ 430
>Medtr1g025920.2 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr1:8346097-8339222 | 20130731
Length = 518
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 115 PSSKTKLSDEAGQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAH 174
P++++ LS+ I+NQ++YYFSD+NLA + L N D EG+VPI+++A+F ++K +
Sbjct: 402 PAAESSLSN----VIVNQIDYYFSDINLANDEFLKS--NMDEEGWVPITLIANFPRVK-N 454
Query: 175 ITSHSQLAT-VLRNSSKLVV 193
+TS+ QL +RNS+ + V
Sbjct: 455 LTSNIQLILDSMRNSNVVDV 474
>Medtr3g114450.1 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr3:53444494-53441023 | 20130731
Length = 471
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 129 ILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHITSHSQLATVLRNS 188
IL Q++YYFSD+NL T D ++ N D G+VP+S++A+F ++K + + LRNS
Sbjct: 370 ILKQIDYYFSDVNL-TNDEFLK-SNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNS 427
Query: 189 SKLVVSEDGKKIKRQ 203
S VV +G K++++
Sbjct: 428 S--VVEVNGDKLRKR 440
>Medtr3g114340.1 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr3:53401536-53399026 | 20130731
Length = 432
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 129 ILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHITSHSQLATVLRNS 188
IL Q++YYFSD+NL T D ++ N D G+VP+S++A+F ++K + + LRNS
Sbjct: 300 ILKQIDYYFSDVNL-TNDEFLK-SNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNS 357
Query: 189 SKLVVSEDGKKIKRQ 203
S VV +G K++++
Sbjct: 358 S--VVEVNGDKLRKR 370
>Medtr5g022790.2 | ATP synthase, A subunit | HC |
chr5:9031583-9026232 | 20130731
Length = 535
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 128 KILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHITSHSQLATVLRN 187
KI+NQ++YYFS+ NL L + N D +G+VPI+++A FKK+ + + +R
Sbjct: 224 KIVNQIDYYFSNENLVKDIFLRK--NMDAQGWVPITLIAGFKKVMDLTDNIQLIIDAIRT 281
Query: 188 SSKLVVSEDGKKIKRQ 203
SS VV G KI+RQ
Sbjct: 282 SS--VVEVQGDKIRRQ 295
>Medtr5g022790.3 | ATP synthase, A subunit | HC |
chr5:9031583-9028239 | 20130731
Length = 387
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 128 KILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKAHITSHSQLATVLRN 187
KI+NQ++YYFS+ NL L + N D +G+VPI+++A FKK+ + + +R
Sbjct: 224 KIVNQIDYYFSNENLVKDIFLRK--NMDAQGWVPITLIAGFKKVMDLTDNIQLIIDAIRT 281
Query: 188 SSKLVVSEDGKKIKRQ 203
SS VV G KI+RQ
Sbjct: 282 SS--VVEVQGDKIRRQ 295