Miyakogusa Predicted Gene
- Lj1g3v5062760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5062760.1 Non Chatacterized Hit- tr|I1NCU5|I1NCU5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50672
PE,79.54,0,La,RNA-binding protein Lupus La; no description,Winged
helix-turn-helix transcription repressor DNA-,CUFF.34060.1
(1338 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60367 similar to UniRef100_A7QB10 Cluster: Chromosome... 1697 0.0
gnl|LJGI|BW625250 similar to UniRef100_Q53M44 Cluster: At2g43970... 803 0.0
gnl|LJGI|TC69986 similar to UniRef100_A7QB10 Cluster: Chromosome... 789 0.0
gnl|LJGI|DC597512 similar to UniRef100_A7QB10 Cluster: Chromosom... 579 e-164
>gnl|LJGI|TC60367 similar to UniRef100_A7QB10 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1076
Score = 1697 bits (856), Expect = 0.0
Identities = 856/856 (100%)
Strand = Plus / Plus
Query: 1 atggctcaagagtcactgtcagaaaccccagatatcttgccagatccatctctttcgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atggctcaagagtcactgtcagaaaccccagatatcttgccagatccatctctttcgagg 280
Query: 61 agcctttcttttagccggctcaacgcacaggcaccggaatatgtgcccactcgacccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 agcctttcttttagccggctcaacgcacaggcaccggaatatgtgcccactcgacccacc 340
Query: 121 gcacgggccgatttgctacagcctaggcttatagtaccacccccgacgtcaccgttccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcacgggccgatttgctacagcctaggcttatagtaccacccccgacgtcaccgttccat 400
Query: 181 ttaccgattcaaggtcatgtgccagtcgtccaggtccaaaatcaccatcatcttacacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttaccgattcaaggtcatgtgccagtcgtccaggtccaaaatcaccatcatcttacacat 460
Query: 241 caggttcactaccggtctcatcatcacccgcaacaatattatgttagttctgattctggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 caggttcactaccggtctcatcatcacccgcaacaatattatgttagttctgattctggt 520
Query: 301 ctgcagcaagttcagcagtctcaagttgacccagatcaccctccttcttccaaaactaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ctgcagcaagttcagcagtctcaagttgacccagatcaccctccttcttccaaaactaag 580
Query: 361 ctgtccgatgaagctggtcagaaaattttgaatcaggtggagtattatttcagtgattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctgtccgatgaagctggtcagaaaattttgaatcaggtggagtattatttcagtgattta 640
Query: 421 aacttagctactactgatcatctgatgaggttcatcaacaaagatccagaaggttttgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aacttagctactactgatcatctgatgaggttcatcaacaaagatccagaaggttttgtg 700
Query: 481 ccgatatctgttgttgcatctttcaagaagattaaggcccatataaccagtcactcccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ccgatatctgttgttgcatctttcaagaagattaaggcccatataaccagtcactcccaa 760
Query: 541 cttgcaactgttttgaggaactcatcaaagcttgtagttagtgaagatggaaagaaaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 cttgcaactgttttgaggaactcatcaaagcttgtagttagtgaagatggaaagaaaatc 820
Query: 601 aaacgccaatgtcccctcactgagtctgatatagaagagctacaatctcgcattgttgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 aaacgccaatgtcccctcactgagtctgatatagaagagctacaatctcgcattgttgtc 880
Query: 661 gctgagaacttacctgaggatcattgccatcagaatcttatgaaagttttttcagctgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 gctgagaacttacctgaggatcattgccatcagaatcttatgaaagttttttcagctgtt 940
Query: 721 gggagtgtgaagactatccgtacctgtccacctcaaactacgaatagtggggcttcatct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 gggagtgtgaagactatccgtacctgtccacctcaaactacgaatagtggggcttcatct 1000
Query: 781 gcttcaagattgggaaaagttgatggcatgcctttatcaaacaagttgcatgcatttatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 gcttcaagattgggaaaagttgatggcatgcctttatcaaacaagttgcatgcatttatt 1060
Query: 841 gaatatgaatctgttg 856
||||||||||||||||
Sbjct: 1061 gaatatgaatctgttg 1076
>gnl|LJGI|BW625250 similar to UniRef100_Q53M44 Cluster: At2g43970/F6E13.10; n=1; Oryza
sativa Japonica Group|Rep: At2g43970/F6E13.10 - Oryza
sativa subsp. japonica (Rice), partial (11%)
Length = 469
Score = 803 bits (405), Expect = 0.0
Identities = 454/473 (95%), Gaps = 18/473 (3%)
Strand = Plus / Plus
Query: 65 tttcttttagccggctcaacgcacaggcaccggaatatgtgcccactcgacccaccgcac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tttcttttagccggctcaacgcacaggcaccggaatatgtgcccactcgacccaccgcac 73
Query: 125 gggcc-gatttgctacagcctaggcttatagtaccacccccgacgtcaccgttccattta 183
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gggcctgatttgctacagcctaggcttatagtaccacccccgacgtcaccgttccattta 133
Query: 184 ccgattcaaggtcatgtgccagtcgtccaggtccaaaatcaccatcatcttacacatcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ccgattcaaggtcatgtgccagtcgtccaggtccaaaatcaccatcatcttacacatcag 193
Query: 244 gttcactaccggtctcatcatcacccgcaacaatattatgttagttctgattctggtctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gttcactaccggtctcatcatcacccgcaacaatattatgttagttctgattctggtctg 253
Query: 304 cagcaagttcagcagtctcaagttgacccagatcaccctccttcttccaaaactaagctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cagcaagttcagcagtctcaagttgacccagatcaccctccttcttccaaaactaagctg 313
Query: 364 tccgatgaagctggtcagaaaattttgaatcaggtggagtattatttcagtgatttaaac 423
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 314 tccgatgaagctggtcagaaaattttgaa-----------------tcagtgatttaaac 356
Query: 424 ttagctactactgatcatctgatgaggttcatcaacaaagatccagaaggttttgtgccg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttagctactactgatcatctgatgaggttcatcaacaaagatccagaaggttttgtgccg 416
Query: 484 atatctgttgttgcatctttcaagaagattaaggcccatataaccagtcactc 536
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 417 atatctgttgttgcatctttcaagaagattaaggcccttataaccagtcactc 469
>gnl|LJGI|TC69986 similar to UniRef100_A7QB10 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 689
Score = 789 bits (398), Expect = 0.0
Identities = 404/406 (99%)
Strand = Plus / Plus
Query: 933 tagacgcgtgtcaaaacctgctcaaggtcgggggaaaaaggggcttgatgttgaagttgg 992
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 tagacgcgtgtcaaaacctgctcaaggtcgggggcaaaaggggcttgatgttgaagttgg 60
Query: 993 ctgtgaggaggatcacacttctgtgcctgagctgcaggcagatgataaacaattagaaga 1052
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 ctgtgaggaggatcacacttctgtgcctgagctgcaggcagatgataaaccattagaaga 120
Query: 1053 tgcttccattcctgagattcagccgcatgagcatgtgggagaagagcatggttatgacaa 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcttccattcctgagattcagccgcatgagcatgtgggagaagagcatggttatgacaa 180
Query: 1113 agagagtgggcggaggaaagggcgtagcaggggccgggctaagggacgtggtcgagttca 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagagtgggcggaggaaagggcgtagcaggggccgggctaagggacgtggtcgagttca 240
Query: 1173 ttgtcatcaaaataatcgtgtgaatcacttgggaacaccctcttcacataattcaatttt 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtcatcaaaataatcgtgtgaatcacttgggaacaccctcttcacataattcaatttt 300
Query: 1233 aactgatcaagtcgttgccaagcaacctcctgggccacgcatgccagatggtacaagagg 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactgatcaagtcgttgccaagcaacctcctgggccacgcatgccagatggtacaagagg 360
Query: 1293 attttcgatgggtcgggggaagccgataagtgttaatattgtttaa 1338
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attttcgatgggtcgggggaagccgataagtgttaatattgtttaa 406
>gnl|LJGI|DC597512 similar to UniRef100_A7QB10 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 548
Score = 579 bits (292), Expect = e-164
Identities = 297/299 (99%)
Strand = Plus / Plus
Query: 646 tctcgcattgttgtcgctgagaacttacctgaggatcattgccatcagaatcttatgaaa 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tctcgcattgttgtcgctgagaacttacctgaggatcattgccatcagaatcttatgaaa 309
Query: 706 gttttttcagctgttgggagtgtgaagactatccgtacctgtccacctcaaactacgaat 765
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 310 gttttttcagctgttgggagtgtgaagactatccgtacctgttcacctcanactacgaat 369
Query: 766 agtggggcttcatctgcttcaagattgggaaaagttgatggcatgcctttatcaaacaag 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agtggggcttcatctgcttcaagattgggaaaagttgatggcatgcctttatcaaacaag 429
Query: 826 ttgcatgcatttattgaatatgaatctgttgagctggctgagagagctgttgctgagctg 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttgcatgcatttattgaatatgaatctgttgagctggctgagagagctgttgctgagctg 489
Query: 886 aatgatgagggaaactggcggagtggcctccgggttcgtctaatgcttagacgcgtgtc 944
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aatgatgagggaaactggcggagtggcctccgggttcgtctaatgcttagacgcgtgtc 548
Score = 52.0 bits (26), Expect = 9e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 620 ctgagtctgatatagaagagctacaa 645
||||||||||||||||||||||||||
Sbjct: 1 ctgagtctgatatagaagagctacaa 26