Miyakogusa Predicted Gene
- Lj1g3v4591010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4591010.1 Non Chatacterized Hit- tr|I3SER7|I3SER7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,NULL; no description,Winged helix-turn-helix transcription
repressor DNA-binding;
SIG,NODE_31328_length_2005_cov_71.025932.path1.1
(939 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68761 similar to UniRef100_A7PT61 Cluster: Chromosome... 1796 0.0
gnl|LJGI|CN825552 weakly similar to UniRef100_A7PT61 Cluster: Ch... 274 9e-73
gnl|LJGI|TC61598 weakly similar to UniRef100_Q9LD95 Cluster: Sig... 161 1e-38
>gnl|LJGI|TC68761 similar to UniRef100_A7PT61 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 961
Score = 1796 bits (906), Expect = 0.0
Identities = 913/914 (99%), Gaps = 1/914 (0%)
Strand = Plus / Plus
Query: 27 gaaacttttgacctttgaagaagagtctcaattgatttctcagatacagaatttgttcag 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaacttttgacctttgaagaagagtctcaattgatttctcagatacagaatttgttcag 60
Query: 87 attggaagaagtgaagatcaggcttcaatctcagtttgggcgtgaaccaactatggctga 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attggaagaagtgaagatcaggcttcaatctcagtttgggcgtgaaccaactatggctga 120
Query: 147 atgggcagatggtgtgggtcttagctgttatgccctgcagacacagcttcgtagt-ggta 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 atgggcagatggtgtgggtcttagctgttatgccctgcagacacagcttcgtagttggta 180
Query: 206 caagaagcaaggaaaagctgattcatgccaatttacgcatggtagttcatgttgctaaaa 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caagaagcaaggaaaagctgattcatgccaatttacgcatggtagttcatgttgctaaaa 240
Query: 266 attatctggggcgtggtctcagctttcaggacttattgcaggagggaagtatgggtctca 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attatctggggcgtggtctcagctttcaggacttattgcaggagggaagtatgggtctca 300
Query: 326 tgaagagcgttgaaaagtttaaaccccaagctggttgccggttcgcttcttacgcttact 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaagagcgttgaaaagtttaaaccccaagctggttgccggttcgcttcttacgcttact 360
Query: 386 ggtggataaggcaaacaataaggagggccttatttctacattctaggacgatccgtcttc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtggataaggcaaacaataaggagggccttatttctacattctaggacgatccgtcttc 420
Query: 446 cggagaatgtttacacccttttgggcaagctcatcgaagcaaagaaattctacaatagag 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggagaatgtttacacccttttgggcaagctcatcgaagcaaagaaattctacaatagag 480
Query: 506 aaggaaatgttcaccccacaaaagaagaattagcaagaaaaataggagttacagtagaca 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaggaaatgttcaccccacaaaagaagaattagcaagaaaaataggagttacagtagaca 540
Query: 566 agttggaaatattgctatctgctgccagaattccactttcgatgcagcaaacggtgtgga 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agttggaaatattgctatctgctgccagaattccactttcgatgcagcaaacggtgtgga 600
Query: 626 cagaccaggatacaacttaccaggagattactgcagacaccgcaattgagaccccagatg 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagaccaggatacaacttaccaggagattactgcagacaccgcaattgagaccccagatg 660
Query: 686 tgtatgttgcaaaacagctaatgaggcgtcacgcgcgcaaccttctacataccttaaacc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgtatgttgcaaaacagctaatgaggcgtcacgcgcgcaaccttctacataccttaaacc 720
Query: 746 caagagaaaggaggataatcaggctaagatttggcattgaagatggctacgagaaatctt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caagagaaaggaggataatcaggctaagatttggcattgaagatggctacgagaaatctt 780
Query: 806 tgtcagaaattggcactgtatttggtttgtctaaggagagggtccgacagttggagagcc 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgtcagaaattggcactgtatttggtttgtctaaggagagggtccgacagttggagagcc 840
Query: 866 gagcattggataagctcaagcagtgccttgctagtcatggacttgatgcatatgcaaact 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gagcattggataagctcaagcagtgccttgctagtcatggacttgatgcatatgcaaact 900
Query: 926 tgcttgtatagttg 939
||||||||||||||
Sbjct: 901 tgcttgtatagttg 914
>gnl|LJGI|CN825552 weakly similar to UniRef100_A7PT61 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (80%)
Length = 717
Score = 274 bits (138), Expect = 9e-73
Identities = 483/598 (80%)
Strand = Plus / Plus
Query: 87 attggaagaagtgaagatcaggcttcaatctcagtttgggcgtgaaccaactatggctga 146
|||||||||| |||||| ||| ||||||||||| |||||| | |||||||||||||||||
Sbjct: 36 attggaagaattgaagaccagtcttcaatctcaatttgggagagaaccaactatggctga 95
Query: 147 atgggcagatggtgtgggtcttagctgttatgccctgcagacacagcttcgtagtggtac 206
|||||| || |||| || |||| ||| || ||||| | |||||||| |||| |
Sbjct: 96 atgggctgagggtgcaggacttaaatgtcgagcgctgcaaatgaagcttcgttgtggcaa 155
Query: 207 aagaagcaaggaaaagctgattcatgccaatttacgcatggtagttcatgttgctaaaaa 266
||||||| |||||||||||| | || ||||| ||||||||| | |||||||||||||
Sbjct: 156 cagaagcagagaaaagctgattaaagcaaatttgcgcatggtactccatgttgctaaaac 215
Query: 267 ttatctggggcgtggtctcagctttcaggacttattgcaggagggaagtatgggtctcat 326
||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||| |
Sbjct: 216 ttaccaggggcgtggtctcagccttcaggacttattacaggagggaagtatgggtctttt 275
Query: 327 gaagagcgttgaaaagtttaaaccccaagctggttgccggttcgcttcttacgcttactg 386
|||||| ||| |||||||||| ||||||| |||||||| || | | ||| || || ||
Sbjct: 276 gaagagtgttaaaaagtttaagccccaagtgggttgccgatttggtagttatgcatattg 335
Query: 387 gtggataaggcaaacaataaggagggccttatttctacattctaggacgatccgtcttcc 446
|||||||| |||| ||||||||| |||| |||||| ||||| ||||| |||||| | ||
Sbjct: 336 gtggataaagcaagcaataaggaaggccatatttcatcattcgaggacaatccgtttgcc 395
Query: 447 ggagaatgtttacacccttttgggcaagctcatcgaagcaaagaaattctacaatagaga 506
||| || || || |||| |||||||| | | || ||||||||||| |||| | |||
Sbjct: 396 ggaaaaggtatatacccagttgggcaaaatattggaggcaaagaaattatacattcaaga 455
Query: 507 aggaaatgttcaccccacaaaagaagaattagcaagaaaaataggagttacagtagacaa 566
|| ||| ||| ||| || |||||||| || ||||||| ||||| || ||| ||||||
Sbjct: 456 gggcaatcttcgcccaaccaaagaagatttggcaagaagggtaggaatttcagaagacaa 515
Query: 567 gttggaaatattgctatctgctgccagaattccactttcgatgcagcaaacggtgtggac 626
| | | ||||||| || ||||||||||||| | || ||||||||||| || |||||
Sbjct: 516 gatttccagtttgctatatgttgccagaattccaatgtctatgcagcaaactgtatggac 575
Query: 627 agaccaggatacaacttaccaggagattactgcagacaccgcaattgagaccccagat 684
||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||
Sbjct: 576 tgaccaaaatacaactttccaggagattactgcagacacttcaatcgagtccccagat 633
>gnl|LJGI|TC61598 weakly similar to UniRef100_Q9LD95 Cluster: Sigma factor-like
protein; n=2; Arabidopsis thaliana|Rep: Sigma
factor-like protein - Arabidopsis thaliana (Mouse-ear
cress), partial (24%)
Length = 737
Score = 161 bits (81), Expect = 1e-38
Identities = 293/361 (81%), Gaps = 2/361 (0%)
Strand = Plus / Plus
Query: 577 ttgctatctgctgccagaattccactttcgatgcagcaaacggtgtggacagaccaggat 636
||||||| || ||||||||||||| | || ||||||||||| || ||||| ||||| ||
Sbjct: 48 ttgctatatgttgccagaattccaatgtctatgcagcaaactgtatggactgaccaaaat 107
Query: 637 acaacttaccaggagattactgcagacaccgcaattgagaccccagatgtgtat-gttgc 695
||||||| ||||||||||||||||||||| |||| ||| |||||||| ||| ||| |
Sbjct: 108 acaactttccaggagattactgcagacacttcaatcgagtccccagata-gtagcgtttc 166
Query: 696 aaaacagctaatgaggcgtcacgcgcgcaaccttctacataccttaaacccaagagaaag 755
|||| |||| |||||||| || | || ||| || ||| || || ||| | ||||||
Sbjct: 167 aaaagagcttatgaggcggcatgtgctcaatctactaagcacgctacgcccgaaagaaag 226
Query: 756 gaggataatcaggctaagatttggcattgaagatggctacgagaaatctttgtcagaaat 815
|||||||||| ||||||||||||| |||| ||||| | | |||||||| |||||| |
Sbjct: 227 gaggataatccggctaagatttggttttgaggatggagaacaaaaatctttatcagaagt 286
Query: 816 tggcactgtatttggtttgtctaaggagagggtccgacagttggagagccgagcattgga 875
||| ||||||||||||| ||||| |||||||| |||||||||| ||| || || |
Sbjct: 287 tggagagatatttggtttgtccaaggaaagggtccgtcagttggagaaccgcgcgttcta 346
Query: 876 taagctcaagcagtgccttgctagtcatggacttgatgcatatgcaaacttgcttgtata 935
||||||||| |||||||||| || || ||||||||||| |||||| |||||||||||||
Sbjct: 347 caagctcaagaagtgccttgcaagccaaggacttgatgcttatgcagacttgcttgtata 406
Query: 936 g 936
|
Sbjct: 407 g 407