Miyakogusa Predicted Gene

Lj1g3v4316380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4316380.1 Non Characterized Hit- tr|K4D212|K4D212_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.36,8e-19,Rhodanese/Cell cycle control
phosphatase,Rhodanese-like domain; Rhodanese Homology
Domain,Rhodanese-,CUFF.32236.1
         (237 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g092820.1 | rhodanese/cell cycle control phosphatase super...   369   e-102
Medtr4g015860.1 | rhodanese/cell cycle control phosphatase super...   102   4e-22
Medtr3g075540.1 | rhodanese/cell cycle control phosphatase super...    70   2e-12
Medtr3g092040.1 | rhodanese/cell cycle control phosphatase super...    55   6e-08
Medtr2g017630.1 | rhodanese/cell cycle control phosphatase super...    53   2e-07
Medtr2g059890.1 | rhodanese/cell cycle control phosphatase super...    51   9e-07

>Medtr7g092820.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr7:36835880-36832869 |
           20130731
          Length = 234

 Score =  369 bits (947), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/241 (72%), Positives = 205/241 (85%), Gaps = 11/241 (4%)

Query: 1   MAGTGFHTXXXXXXXXXXXGTCWLVLKTHNARALPGKLPG----RRSLTLKAEVKFVNAE 56
           MAGT F T           G CWLV+KTHNAR++PGKL      R+  T+KAE+KFV A+
Sbjct: 1   MAGTAFSTSCNL-------GRCWLVVKTHNARSMPGKLVSQCKMRKKFTIKAEIKFVTAD 53

Query: 57  QAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPLFVENKDNDPGTIIKRTLHNNFSGLF 116
            AKEL+ VDGY+VLDVRD +Q+ERAHIK+CYHVPLFVEN DNDPGT + RT+HNNFSGLF
Sbjct: 54  DAKELVKVDGYNVLDVRDKSQYERAHIKTCYHVPLFVENTDNDPGTFLLRTVHNNFSGLF 113

Query: 117 YGLPFTKPNPEFVQSVKSQIPPESKVLVVCQEGLRSTAAADRLEKAGFEDVACITSGLQS 176
           +G+PFT+PNP+FVQSVKSQI PE+K+L+VCQEGLRS AAA++LE AGF++VACITSGLQ+
Sbjct: 114 FGIPFTRPNPDFVQSVKSQIQPETKLLIVCQEGLRSAAAANKLEDAGFQNVACITSGLQT 173

Query: 177 VKPGTFDTVGSKELQDAGKAGLVTIQGKISTVLGTVLVCAYLFITFFPDQAEKLFQLVPA 236
           VKPGTF++VGS ELQ+AGKAGLV IQGKIS VLGTVL+CAYLFITFFPDQAEKL QLVPA
Sbjct: 174 VKPGTFESVGSTELQNAGKAGLVQIQGKISAVLGTVLICAYLFITFFPDQAEKLIQLVPA 233

Query: 237 G 237
           G
Sbjct: 234 G 234


>Medtr4g015860.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr4:4822257-4824344 |
           20130731
          Length = 224

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 1/149 (0%)

Query: 42  RSLTLKAEVKFVNAEQAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPLFVENKDNDPG 101
           R L     ++ +  + A  ++  +G+ +LDVR   + E+AH+K   HVP+FVE+KDN P 
Sbjct: 50  RQLIESGTIRTILPKDASTVMNSEGFVLLDVRPNWEREKAHVKGSLHVPMFVEDKDNGPL 109

Query: 102 TIIKRTLHNNFSGLFYGLPFTKPNPEFVQSVKSQIPPE-SKVLVVCQEGLRSTAAADRLE 160
           T++K+ +H  + G + G   T  N EF+  V++ +P + +KVLV C EGLRS  A  +L 
Sbjct: 110 TLLKKWVHFGYIGAWTGQYLTTFNSEFLSQVENVVPGKGTKVLVACGEGLRSMTATSKLY 169

Query: 161 KAGFEDVACITSGLQSVKPGTFDTVGSKE 189
             G+ ++  +  G    K   F  V  KE
Sbjct: 170 NGGYRNLGWLVGGFSRSKDDDFSDVEGKE 198


>Medtr3g075540.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr3:34400445-34404582 |
           20130731
          Length = 290

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 78/161 (48%)

Query: 43  SLTLKAEVKFVNAEQAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPLFVENKDNDPGT 102
           +L    ++K +   +A   + +    +LDVR   +  +A +K    +P+F  +   D GT
Sbjct: 79  ALLRDEKIKVLTPREAGYAVQLSNKPLLDVRPSNEHNKAWVKGSTWIPIFNVDDGLDVGT 138

Query: 103 IIKRTLHNNFSGLFYGLPFTKPNPEFVQSVKSQIPPESKVLVVCQEGLRSTAAADRLEKA 162
           I ++  +    G + G+P    +  F+  V  + P +++++V CQ+GLRS AA + L  A
Sbjct: 139 IPRKITNFAMGGWWSGMPTLSFDNLFLPKVAEKFPKDAELIVACQKGLRSLAACELLYNA 198

Query: 163 GFEDVACITSGLQSVKPGTFDTVGSKELQDAGKAGLVTIQG 203
           G+ ++  +  G  + +       GS  L+ AG  G+    G
Sbjct: 199 GYTNLFWVQGGFDAAEEEDLVVEGSAPLKFAGIGGVSEFLG 239


>Medtr3g092040.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr3:42011518-42013354 |
           20130731
          Length = 232

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 10/130 (7%)

Query: 26  LKTHNARALPGKLPG------RRSLTLKAEVKFVNAEQAKELIAVDGYSVLDVRDITQFE 79
           +   +A   P K P       +R L L+  VK V  ++A  L   + + +LDVR   +F+
Sbjct: 54  ITVQSAATKPAKSPAEEEWKVKRELLLQKRVKSVEPKEALRLQKENNFVILDVRPEAEFK 113

Query: 80  RAHIKSCYHVPLFVENKDNDPGTIIKRTLHNNFSGLFYGLPFTKPNPEFVQSVKSQIPPE 139
             H     +V ++   K+     I +R     F G+F G   T+ NPEF++SV  Q+   
Sbjct: 114 EGHPPDAINVQVYRLIKEWTAWDIARRAAFA-FFGIFSG---TEENPEFIKSVGEQLDKN 169

Query: 140 SKVLVVCQEG 149
           +K++V C  G
Sbjct: 170 AKIIVACSAG 179


>Medtr2g017630.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr2:5409395-5410749 |
           20130731
          Length = 137

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 25/145 (17%)

Query: 53  VNAEQAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPLFVENKDNDPGTIIKRTLHNNF 112
           ++   AK+L+   GY+ LDVR + +F ++H+++  +VP   + ++   G +         
Sbjct: 13  LDVHAAKDLLHSSGYNYLDVRSVEEFNKSHVENAINVPYMFKTEE---GRV--------- 60

Query: 113 SGLFYGLPFTKPNPEFVQSVKSQIPPESKVLVVCQEGLRSTAAADRLEKAGFEDVACITS 172
                       NP+FV  V +    E  ++V C  G RS  A   L  +GF+ +  +  
Sbjct: 61  -----------KNPDFVNQVAAICKSEDHLIVACNSGGRSIRACVDLHNSGFQHIVNMGG 109

Query: 173 GLQSVKPGTF--DTVGSKELQDAGK 195
           G  +     F  D   + EL+ A K
Sbjct: 110 GYSAWVDAGFAGDDKPANELKTACK 134


>Medtr2g059890.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr2:24667015-24664055 |
           20130731
          Length = 137

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 23/128 (17%)

Query: 49  EVKFVNAEQAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPLFVENKDNDPGTIIKRTL 108
           +V  ++    K+L+   GY+ LDVR + +F ++H+++  +VP                  
Sbjct: 9   DVVTLDVHATKDLLDSSGYNYLDVRTVEEFNKSHVENAINVPY----------------- 51

Query: 109 HNNFSGLFYGLPFTKPNPEFVQSVKSQIPPESKVLVVCQEGLRSTAAADRLEKAGFEDVA 168
                 LF        NP+FV  V++    E  ++V C  G RS+ A   L  +GF+ + 
Sbjct: 52  ------LFSTEEGRVKNPDFVNQVEAIYKSEDHLIVACNAGGRSSRAWVDLHNSGFKHIV 105

Query: 169 CITSGLQS 176
            +  G  +
Sbjct: 106 NMGGGYSA 113