Miyakogusa Predicted Gene

Lj1g3v4316380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4316380.1 Non Chatacterized Hit- tr|K4D212|K4D212_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.36,8e-19,Rhodanese/Cell cycle control
phosphatase,Rhodanese-like domain; Rhodanese Homology
Domain,Rhodanese-,CUFF.32236.1
         (237 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42220.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...   319   1e-87
AT3G08920.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...   119   1e-27
AT4G24750.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...    87   1e-17
AT4G27700.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...    57   8e-09
AT5G66170.3 | Symbols: STR18 | sulfurtransferase 18 | chr5:26447...    49   4e-06

>AT2G42220.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr2:17592105-17593305 FORWARD
           LENGTH=234
          Length = 234

 Score =  319 bits (817), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 148/200 (74%), Positives = 180/200 (90%)

Query: 32  RALPGKLPGRRSLTLKAEVKFVNAEQAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPL 91
           +++ G +  RRSL + AE+KFVNAE+AK+LIA +GYSV+DVRD TQFERAHIKSC H+PL
Sbjct: 31  KSVSGNVIRRRSLRIAAELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCSHIPL 90

Query: 92  FVENKDNDPGTIIKRTLHNNFSGLFYGLPFTKPNPEFVQSVKSQIPPESKVLVVCQEGLR 151
           F+ N+DND GTIIKRT+HNNFSGLF+GLPFTK NPEF++SV+++   +SK+L+VCQEGLR
Sbjct: 91  FIYNEDNDIGTIIKRTVHNNFSGLFFGLPFTKVNPEFLKSVRNEFSQDSKLLLVCQEGLR 150

Query: 152 STAAADRLEKAGFEDVACITSGLQSVKPGTFDTVGSKELQDAGKAGLVTIQGKISTVLGT 211
           S AAA RLE+AG+E++AC+TSGLQSVKPGTF++VGS ELQ+AGKAGL+TIQGKIS VLGT
Sbjct: 151 SAAAASRLEEAGYENIACVTSGLQSVKPGTFESVGSTELQNAGKAGLITIQGKISAVLGT 210

Query: 212 VLVCAYLFITFFPDQAEKLF 231
           VLVCAYLFI FFPDQAEKLF
Sbjct: 211 VLVCAYLFIQFFPDQAEKLF 230


>AT3G08920.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr3:2712274-2713117 FORWARD
           LENGTH=214
          Length = 214

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 2/159 (1%)

Query: 42  RSLTLKAEVKFVNAEQAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPLFVENKDNDPG 101
           + L L  +V+ V  ++A  ++A +GY +LDVR   + E+A +K   HVPLFVE+ DN P 
Sbjct: 37  KELILSGKVRAVEPKEANAVVASEGYILLDVRPAWEREKARVKGSLHVPLFVEDPDNGPI 96

Query: 102 TIIKRTLHNNFSGLFYGLPFTKPNPEFVQSVKSQIP-PESKVLVVCQEGLRSTAAADRLE 160
           T++K+ +H  + GL+ G  FT  N EF   V   +P  ESKVLVVC EGLRS AA  +L 
Sbjct: 97  TLLKKWIHLGYIGLWTGQRFTMINDEFALRVVEAVPDKESKVLVVCGEGLRSLAAVSKLH 156

Query: 161 KAGFEDVACITSGLQSVKPGTFDTV-GSKELQDAGKAGL 198
             G++ +  +T G   V  G F  + G++EL+ A   G+
Sbjct: 157 GEGYKSLGWLTGGFNRVSEGDFPEIEGTEELRFATIGGV 195


>AT4G24750.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr4:12758422-12760749 REVERSE
           LENGTH=292
          Length = 292

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 2/161 (1%)

Query: 44  LTLKAEVKFVNAEQAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPLFVENKDN-DPGT 102
           L  + +VK +   +A   I++    +LDVR  ++  +A IK    VP+F +N DN D GT
Sbjct: 82  LLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIF-DNDDNLDAGT 140

Query: 103 IIKRTLHNNFSGLFYGLPFTKPNPEFVQSVKSQIPPESKVLVVCQEGLRSTAAADRLEKA 162
           + K+       G + G P    N  F+  V+ + P +S+++V CQ+GLRS AA + L  A
Sbjct: 141 LSKKVTSFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIVACQKGLRSLAACELLYNA 200

Query: 163 GFEDVACITSGLQSVKPGTFDTVGSKELQDAGKAGLVTIQG 203
           G+E++  +  GL+S +     T G + L+ AG  G     G
Sbjct: 201 GYENLFWVQGGLESAQDEDLVTEGVQPLKLAGIGGFSEFLG 241


>AT4G27700.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr4:13826541-13827673 REVERSE
           LENGTH=224
          Length = 224

 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 41  RRSLTLKAEVKFVNAEQAKELIAVDGYSVLDVRDITQFERAHIKSCYHVPLFVENKDNDP 100
           +R L L+  V+ V+ ++A+ L   + + +LDVR   +++  H     +V ++   ++   
Sbjct: 65  KRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIREWTA 124

Query: 101 GTIIKRTLHNNFSGLFYGLPFTKPNPEFVQSVKSQIPPESKVLVVC 146
             I +R L   F G+F G   T+ NPEF+QSV++++  E+K++V C
Sbjct: 125 WDIARR-LGFAFFGIFSG---TEENPEFIQSVEAKLDKEAKIIVAC 166


>AT5G66170.3 | Symbols: STR18 | sulfurtransferase 18 |
           chr5:26447828-26448586 FORWARD LENGTH=136
          Length = 136

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 26/133 (19%)

Query: 43  SLTLKAEVKFVNAEQAKELIAVDGYSVLDVRDITQFERAHIKSC--YHVPLFVENKDNDP 100
           S T   EV  V+  QAK L+   G+  LDVR   +F R H ++    ++P  +    N P
Sbjct: 7   SSTKAEEVVSVDVSQAKTLLQ-SGHQYLDVRTQDEFRRGHCEAAKIVNIPYML----NTP 61

Query: 101 GTIIKRTLHNNFSGLFYGLPFTKPNPEFVQSVKSQIPPESKVLVVCQEGLRSTAAADRLE 160
              +K                   N EF++ V S + P   +LV CQ G RS  A   L 
Sbjct: 62  QGRVK-------------------NQEFLEQVSSLLNPADDILVGCQSGARSLKATTELV 102

Query: 161 KAGFEDVACITSG 173
            AG++ V  +  G
Sbjct: 103 AAGYKKVRNVGGG 115