Miyakogusa Predicted Gene

Lj1g3v4103640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4103640.1 tr|A9TMT4|A9TMT4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_223708,55.81,6e-18,MRP-L27,Ribosomal protein L27/L41,
mitochondrial; MITOCHONDRIAL RIBOSOMAL PROTEIN
L41,NULL,NODE_66711_length_612_cov_47.429737.path2.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g045910.1 | LRR receptor-like kinase family protein | HC |...   155   9e-39

>Medtr5g045910.1 | LRR receptor-like kinase family protein | HC |
            chr5:20129800-20139083 | 20130731
          Length = 1243

 Score =  155 bits (391), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 71/91 (78%), Positives = 78/91 (85%)

Query: 1    MPLGLILGIGRAFRRKRTSSLDILTSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPK 60
            MPLGLILGIGRA+R KR S+LDIL+ KRAPR +YKGKNCKPTGF TRKGGYVVV EKLP 
Sbjct: 1152 MPLGLILGIGRAYRLKRASTLDILSPKRAPRGFYKGKNCKPTGFFTRKGGYVVVKEKLPN 1211

Query: 61   YVVPDLTDFKLKPYVSQCPREVNTSEDSQTT 91
            YVVPDLT FKLKPYVSQCP E  TS+++  T
Sbjct: 1212 YVVPDLTGFKLKPYVSQCPIEAKTSDEASQT 1242