Miyakogusa Predicted Gene

Lj1g3v4103640.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4103640.1 tr|A9TMT4|A9TMT4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_223708,55.81,6e-18,MRP-L27,Ribosomal protein L27/L41,
mitochondrial; MITOCHONDRIAL RIBOSOMAL PROTEIN
L41,NULL,NODE_66711_length_612_cov_47.429737.path2.1
         (282 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70976 similar to UniRef100_Q42246 Cluster: YmL27; n=1...   551   e-157
gnl|LJGI|TC74785                                                      139   1e-32

>gnl|LJGI|TC70976 similar to UniRef100_Q42246 Cluster: YmL27; n=1; Arabidopsis
           thaliana|Rep: YmL27 - Arabidopsis thaliana (Mouse-ear
           cress), partial (94%)
          Length = 644

 Score =  551 bits (278), Expect = e-157
 Identities = 281/282 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcctctcgggctaattttaggaattggaagggcatttcgaaggaagcgaacatcttca 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 113 atgcctctcgggctaattttaggaattggaggggcatttcgaaggaagcgaacatcttca 172

                                                                       
Query: 61  cttgacattctaacatcaaaacgtgctcctcgagattactacaagggcaagaactgcaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 cttgacattctaacatcaaaacgtgctcctcgagattactacaagggcaagaactgcaag 232

                                                                       
Query: 121 ccaaccggttttcacactcgcaaaggtgggtatgtggtggtgccggaaaaattaccaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ccaaccggttttcacactcgcaaaggtgggtatgtggtggtgccggaaaaattaccaaag 292

                                                                       
Query: 181 tatgtagttcctgatttgactgatttcaagctcaaaccatatgtatctcagtgtcccaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tatgtagttcctgatttgactgatttcaagctcaaaccatatgtatctcagtgtcccaga 352

                                                     
Query: 241 gaagtcaatacctctgaggattctcagacgactacataattt 282
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaagtcaatacctctgaggattctcagacgactacataattt 394


>gnl|LJGI|TC74785 
          Length = 549

 Score =  139 bits (70), Expect = 1e-32
 Identities = 73/74 (98%)
 Strand = Plus / Plus

                                                                       
Query: 209 agctcaaaccatatgtatctcagtgtcccagagaagtcaatacctctgaggattctcaga 268
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agctccaaccatatgtatctcagtgtcccagagaagtcaatacctctgaggattctcaga 331

                         
Query: 269 cgactacataattt 282
           ||||||||||||||
Sbjct: 332 cgactacataattt 345