Miyakogusa Predicted Gene

Lj1g3v3964640.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3964640.1 Non Chatacterized Hit- tr|I3SKF4|I3SKF4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,81.58,0.000000000001, ,CUFF.31582.1
         (208 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58131 similar to UniRef100_A7PE95 Cluster: Chromosome...   147   3e-35
gnl|LJGI|TC73129 homologue to UniRef100_A7PE95 Cluster: Chromoso...   131   2e-30
gnl|LJGI|BW599062 homologue to UniRef100_A7PE95 Cluster: Chromos...    56   9e-08

>gnl|LJGI|TC58131 similar to UniRef100_A7PE95 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (70%)
          Length = 1142

 Score =  147 bits (74), Expect = 3e-35
 Identities = 98/106 (92%)
 Strand = Plus / Plus

                                                                       
Query: 79  agctttttaaaccggtgcttctggaaaaaatccatttctacatggacatcaactggggat 138
           ||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 735 agcttttcaaaccggtgcttctggacaaaagccatttctatatggacatcaactggggat 794

                                                         
Query: 139 gcggatcacgttatgattgttggttcatattttcattatgccggtg 184
           || ||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 795 gctgatcatgttatgattgttggttcatatttccattatgctggtg 840


>gnl|LJGI|TC73129 homologue to UniRef100_A7PE95 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (20%)
          Length = 639

 Score =  131 bits (66), Expect = 2e-30
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                       
Query: 79  agctttttaaaccggtgcttctggaaaaaatccatttctacatggacatcaactggggat 138
           ||||||| ||||||||||||||||| |||| ||||||||  |||||||||||||||||||
Sbjct: 235 agcttttcaaaccggtgcttctggacaaaagccatttctttatggacatcaactggggat 294

                                                         
Query: 139 gcggatcacgttatgattgttggttcatattttcattatgccggtg 184
           || || |||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 295 gctgaccacgttatgattgtgggttcatatttccattatgctggtg 340


>gnl|LJGI|BW599062 homologue to UniRef100_A7PE95 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (14%)
          Length = 315

 Score = 56.0 bits (28), Expect = 9e-08
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 145 cacgttatgattgttggttcatattttcattatgccggtg 184
           |||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 12  cacgttatgattgtgggttcatatttccattatgctggtg 51