Miyakogusa Predicted Gene

Lj1g3v3943760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3943760.1 Non Characterized Hit- tr|A5BBW8|A5BBW8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,64.06,0.000000000000004,UNCHARACTERIZED,NULL; TRANSPORTIN 3 AND
IMPORTIN 13,NULL,CUFF.31532.1
         (311 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g084880.1 | transportin-like protein | HC | chr7:32792485-...   433   e-122

>Medtr7g084880.1 | transportin-like protein | HC |
           chr7:32792485-32774045 | 20130731
          Length = 987

 Score =  433 bits (1114), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/301 (74%), Positives = 246/301 (81%), Gaps = 22/301 (7%)

Query: 1   MNLVELLVDICHMLGSSIFMQKLFIGRWASQNPSIPWKEVESKLFALNAAADVIIQDGQS 60
           MNLVELLVDICH+LGS IF QK+FIG  AS N S+PWKE+ESKLFALN+AADVIIQDGQ 
Sbjct: 413 MNLVELLVDICHLLGSMIFTQKIFIGGSASSNLSLPWKEMESKLFALNSAADVIIQDGQH 472

Query: 61  YGFSVIMQLVTMLSTKPSDGLKGFICIVYRSLADAIGSYSKWVSAFKENFRPLLLFLAIG 120
           + FS +MQLVTMLS+KPSDGLKGFICIVYRSLAD IGSYSKW+SAFK+NFRPLLLFLAIG
Sbjct: 473 FDFSAVMQLVTMLSSKPSDGLKGFICIVYRSLADTIGSYSKWISAFKDNFRPLLLFLAIG 532

Query: 121 ISEPLSSNACASALRKICEDASVVIYEPSNLEILMWIGEGLEKWHLSLEDEEEVMQAISL 180
           ISEPLSSNACASALRK+                  W+ E               M  ISL
Sbjct: 533 ISEPLSSNACASALRKV------------------WVREVA----FIFGRRGRSMHTISL 570

Query: 181 VLGSVPNQELKSNLLARLLSSSYEAIGKLVDPDKSLSLKQNPASYTQILSAASRGLHRMG 240
           VLGSVPN ELKSNLLA+LLSSSY+AIGKLVDP+ + SLKQNPA YTQIL+AASRGLHR+G
Sbjct: 571 VLGSVPNLELKSNLLAKLLSSSYDAIGKLVDPENNGSLKQNPACYTQILNAASRGLHRIG 630

Query: 241 TIFSHLPISVATEPEADELILSLLRVFWPILEKIFSSEHMESGNLSIAACRALSLAIQSS 300
           T+FSHL ISVA EP AD+LIL LLRVFWP+LEKIF+SE+MESGNLSIAACRALS AIQSS
Sbjct: 631 TVFSHLSISVANEPVADDLILLLLRVFWPVLEKIFTSEYMESGNLSIAACRALSSAIQSS 690

Query: 301 G 301
           G
Sbjct: 691 G 691