Miyakogusa Predicted Gene

Lj1g3v3943760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3943760.1 Non Chatacterized Hit- tr|A5BBW8|A5BBW8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,64.06,0.000000000000004,UNCHARACTERIZED,NULL; TRANSPORTIN 3 AND
IMPORTIN 13,NULL,CUFF.31532.1
         (311 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12930.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   384   e-107

>AT1G12930.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:4398588-4405495 REVERSE LENGTH=1005
          Length = 1005

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/300 (62%), Positives = 243/300 (81%)

Query: 2   NLVELLVDICHMLGSSIFMQKLFIGRWASQNPSIPWKEVESKLFALNAAADVIIQDGQSY 61
           NL+ELLVDIC +L  + F+ KLF G   S + S+P +E+E+KLFAL A +++I+Q+G+++
Sbjct: 406 NLLELLVDICQLLHPTTFVSKLFFGGVPSSSVSMPLREIEAKLFALTAVSEIILQEGEAF 465

Query: 62  GFSVIMQLVTMLSTKPSDGLKGFICIVYRSLADAIGSYSKWVSAFKENFRPLLLFLAIGI 121
            F++IMQLV+  S +PS  LKGFI +VYRSLAD +GSYS+W+S F  N RPLLLFLA GI
Sbjct: 466 DFALIMQLVSAFSVRPSSELKGFISVVYRSLADVVGSYSRWISVFPSNARPLLLFLAGGI 525

Query: 122 SEPLSSNACASALRKICEDASVVIYEPSNLEILMWIGEGLEKWHLSLEDEEEVMQAISLV 181
           SEP+ S+ACASALRKICEDA  VI E SNL+ILMWIGE LE+W L+LEDEEEV+ AI+++
Sbjct: 526 SEPICSHACASALRKICEDAPAVIQETSNLDILMWIGECLEQWDLTLEDEEEVITAITVI 585

Query: 182 LGSVPNQELKSNLLARLLSSSYEAIGKLVDPDKSLSLKQNPASYTQILSAASRGLHRMGT 241
           LGSV N+EL++ LL +LLSSSY  + KLVD D   S +Q+PA+YT++LS+ +RGL+R+GT
Sbjct: 586 LGSVANKELQNKLLTQLLSSSYGVLSKLVDEDAESSGRQSPATYTRMLSSVTRGLYRIGT 645

Query: 242 IFSHLPISVATEPEADELILSLLRVFWPILEKIFSSEHMESGNLSIAACRALSLAIQSSG 301
           +FSHL  S+ + P AD  ILSLL VFWPILEK+F SEHMESG+L+ AACRALS+A+QSSG
Sbjct: 646 VFSHLATSLPSVPVADGPILSLLTVFWPILEKLFRSEHMESGSLAAAACRALSVAVQSSG 705