Miyakogusa Predicted Gene

Lj1g3v3645350.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3645350.2 Non Characterized Hit- tr|K4BBG6|K4BBG6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.91,0.0000000000002,seg,NULL,CUFF.31017.2
         (336 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helic...   351   7e-97
Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helic...   150   2e-36

>Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helicase |
            HC | chr7:28265418-28275446 | 20130731
          Length = 1252

 Score =  351 bits (900), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 194/348 (55%), Positives = 230/348 (66%), Gaps = 13/348 (3%)

Query: 1    IPSFXXXXXXXXXGGRAFEAEEDKCKIITEKTVFDHIREKAKNFSLLSALDNIRCPPMEV 60
            IP+F            A E +EDK KIITEKTVFDHIREKAKNFSLLS+ +NIRCPP+EV
Sbjct: 906  IPTFDLLNEMFEEDECATEVQEDKFKIITEKTVFDHIREKAKNFSLLSSFENIRCPPVEV 965

Query: 61   L-ARNHVREK-------RPDYH-HEVVILDEEDKLEVPRKTDVNLLPQLRKAEHDDINLY 111
            L  RNH  EK       +  YH HEVV+LD++D  +VP +TDVN    LRKAE +DINL 
Sbjct: 966  LLGRNHACEKWSNHGHEKTSYHGHEVVVLDDDDN-KVPGQTDVNFQADLRKAEQEDINLS 1024

Query: 112  LTLNDHNTAESSNNMSSAVDSGIFIPEPEARNYEKSTEETIFDHIRRKSKDFPLPSELDY 171
            LTLNDHN A +S+N+SS VD+GIF PEP+AR+YE +TEET+FDHI+RKS+DFP  S+LD 
Sbjct: 1025 LTLNDHNIAVNSDNISSVVDTGIFFPEPKARSYENATEETVFDHIKRKSEDFPQISKLDC 1084

Query: 172  MNSMVHKTESFTNNHSSSLKATLGMATEINSLDMVTDDMLPSYKGTADVKKYSSSIQAGT 231
            + + + KTE F+ NH +SLKA LGM  E N  DMVT  ML S   TADV+ YSS  Q GT
Sbjct: 1085 LETAIKKTEFFSKNHPNSLKAALGMVAETNFSDMVTGSMLTSDMKTADVENYSSGFQVGT 1144

Query: 232  EVKHKNSEGFGCVDGVLN--KSAFSNNSIQSSIYNPIVSFSMVKEKKRSLDAGCFAESGK 289
             V HK SE   C DGV+N  K   S NS+QSS + P + F M KEK  S D+G F +  K
Sbjct: 1145 SVNHKKSEDSCCTDGVVNISKGVSSTNSVQSSNFVPFIGFPMSKEKNWSSDSGSFEQRSK 1204

Query: 290  KQHCXXXXXXXXXXXX-XXXXQCCYLETTGQMKEAESYLGFKSVFSFL 336
            KQ C                 QCC LETTGQM + E  LGFKSVFSFL
Sbjct: 1205 KQRCSPIESKEEKLNSCEIRRQCCSLETTGQMNQMEPSLGFKSVFSFL 1252


>Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helicase |
            HC | chr7:28265418-28275446 | 20130731
          Length = 1050

 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 100/142 (70%), Gaps = 10/142 (7%)

Query: 1    IPSFXXXXXXXXXGGRAFEAEEDKCKIITEKTVFDHIREKAKNFSLLSALDNIRCPPMEV 60
            IP+F            A E +EDK KIITEKTVFDHIREKAKNFSLLS+ +NIRCPP+EV
Sbjct: 906  IPTFDLLNEMFEEDECATEVQEDKFKIITEKTVFDHIREKAKNFSLLSSFENIRCPPVEV 965

Query: 61   -LARNHVREK-------RPDYH-HEVVILDEEDKLEVPRKTDVNLLPQLRKAEHDDINLY 111
             L RNH  EK       +  YH HEVV+LD++D  +VP +TDVN    LRKAE +DINL 
Sbjct: 966  LLGRNHACEKWSNHGHEKTSYHGHEVVVLDDDDN-KVPGQTDVNFQADLRKAEQEDINLS 1024

Query: 112  LTLNDHNTAESSNNMSSAVDSG 133
            LTLNDHN A +S+N+SS VD+G
Sbjct: 1025 LTLNDHNIAVNSDNISSVVDTG 1046