Miyakogusa Predicted Gene
- Lj1g3v3645350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3645350.1 Non Characterized Hit- tr|K4BBG6|K4BBG6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.91,0.0000000000002,seg,NULL,CUFF.31017.1
(336 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helic... 351 7e-97
Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helic... 150 2e-36
>Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helicase |
HC | chr7:28265418-28275446 | 20130731
Length = 1252
Score = 351 bits (900), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 230/348 (66%), Gaps = 13/348 (3%)
Query: 1 IPSFXXXXXXXXXGGRAFEAEEDKCKIITEKTVFDHIREKAKNFSLLSALDNIRCPPMEV 60
IP+F A E +EDK KIITEKTVFDHIREKAKNFSLLS+ +NIRCPP+EV
Sbjct: 906 IPTFDLLNEMFEEDECATEVQEDKFKIITEKTVFDHIREKAKNFSLLSSFENIRCPPVEV 965
Query: 61 L-ARNHVREK-------RPDYH-HEVVILDEEDKLEVPRKTDVNLLPQLRKAEHDDINLY 111
L RNH EK + YH HEVV+LD++D +VP +TDVN LRKAE +DINL
Sbjct: 966 LLGRNHACEKWSNHGHEKTSYHGHEVVVLDDDDN-KVPGQTDVNFQADLRKAEQEDINLS 1024
Query: 112 LTLNDHNTAESSNNMSSAVDSGIFIPEPEARNYEKSTEETIFDHIRRKSKDFPLPSELDY 171
LTLNDHN A +S+N+SS VD+GIF PEP+AR+YE +TEET+FDHI+RKS+DFP S+LD
Sbjct: 1025 LTLNDHNIAVNSDNISSVVDTGIFFPEPKARSYENATEETVFDHIKRKSEDFPQISKLDC 1084
Query: 172 MNSMVHKTESFTNNHSSSLKATLGMATEINSLDMVTDDMLPSYKGTADVKKYSSSIQAGT 231
+ + + KTE F+ NH +SLKA LGM E N DMVT ML S TADV+ YSS Q GT
Sbjct: 1085 LETAIKKTEFFSKNHPNSLKAALGMVAETNFSDMVTGSMLTSDMKTADVENYSSGFQVGT 1144
Query: 232 EVKHKNSEGFGCVDGVLN--KSAFSNNSIQSSIYNPIVSFSMVKEKKRSLDAGCFAESGK 289
V HK SE C DGV+N K S NS+QSS + P + F M KEK S D+G F + K
Sbjct: 1145 SVNHKKSEDSCCTDGVVNISKGVSSTNSVQSSNFVPFIGFPMSKEKNWSSDSGSFEQRSK 1204
Query: 290 KQHCXXXXXXXXXXXX-XXXXQCCYLETTGQMKEAESYLGFKSVFSFL 336
KQ C QCC LETTGQM + E LGFKSVFSFL
Sbjct: 1205 KQRCSPIESKEEKLNSCEIRRQCCSLETTGQMNQMEPSLGFKSVFSFL 1252
>Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helicase |
HC | chr7:28265418-28275446 | 20130731
Length = 1050
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 100/142 (70%), Gaps = 10/142 (7%)
Query: 1 IPSFXXXXXXXXXGGRAFEAEEDKCKIITEKTVFDHIREKAKNFSLLSALDNIRCPPMEV 60
IP+F A E +EDK KIITEKTVFDHIREKAKNFSLLS+ +NIRCPP+EV
Sbjct: 906 IPTFDLLNEMFEEDECATEVQEDKFKIITEKTVFDHIREKAKNFSLLSSFENIRCPPVEV 965
Query: 61 -LARNHVREK-------RPDYH-HEVVILDEEDKLEVPRKTDVNLLPQLRKAEHDDINLY 111
L RNH EK + YH HEVV+LD++D +VP +TDVN LRKAE +DINL
Sbjct: 966 LLGRNHACEKWSNHGHEKTSYHGHEVVVLDDDDN-KVPGQTDVNFQADLRKAEQEDINLS 1024
Query: 112 LTLNDHNTAESSNNMSSAVDSG 133
LTLNDHN A +S+N+SS VD+G
Sbjct: 1025 LTLNDHNIAVNSDNISSVVDTG 1046