Miyakogusa Predicted Gene
- Lj1g3v3381300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3381300.1 tr|E6NUE8|E6NUE8_9ROSI JMS10C05.1 protein
OS=Jatropha curcas GN=JMS10C05.1 PE=4
SV=1,26.83,2e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; PGR3 (P,CUFF.30566.1
(576 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 477 e-134
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 450 e-126
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 433 e-121
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 422 e-118
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 422 e-118
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 421 e-118
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 403 e-112
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 399 e-111
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 386 e-107
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 385 e-107
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 384 e-106
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 370 e-102
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 368 e-102
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 362 e-100
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 362 e-100
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 361 e-100
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 1e-99
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 360 1e-99
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 360 2e-99
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 3e-99
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 3e-98
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 355 6e-98
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 355 6e-98
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 1e-97
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 2e-97
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 353 2e-97
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 1e-96
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 3e-96
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 5e-96
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 346 2e-95
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 346 2e-95
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 3e-95
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 3e-95
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 1e-94
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 3e-94
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 3e-94
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 5e-94
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 341 7e-94
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 4e-93
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 338 6e-93
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 2e-92
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 1e-91
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 3e-91
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 5e-91
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 1e-90
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 327 2e-89
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 2e-89
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 325 7e-89
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 9e-89
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 3e-88
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 320 1e-87
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 1e-86
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 4e-84
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 2e-83
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 304 1e-82
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 3e-82
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 2e-81
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 296 2e-80
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 2e-80
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 5e-79
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 287 2e-77
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 279 3e-75
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 277 1e-74
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 1e-74
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 8e-69
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 3e-67
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 251 7e-67
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 1e-64
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 2e-64
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 240 2e-63
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 2e-62
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 9e-62
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 234 1e-61
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 234 2e-61
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 232 6e-61
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 9e-61
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 224 9e-59
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 224 1e-58
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 9e-58
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 6e-57
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 1e-56
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 1e-56
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 9e-56
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 8e-55
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 203 3e-52
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 198 7e-51
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 2e-49
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 4e-48
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 5e-47
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 4e-46
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 4e-46
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 6e-44
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 8e-44
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 1e-43
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 8e-43
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 7e-41
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 164 1e-40
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 7e-40
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 9e-40
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 1e-37
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 92 9e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 9e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 76 6e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 72 1e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 68 2e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 66 8e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 66 9e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 63 7e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 62 1e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 61 2e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 60 4e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 5e-09
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 8e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 55 1e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 54 4e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 4e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 54 4e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/576 (40%), Positives = 368/576 (63%), Gaps = 9/576 (1%)
Query: 3 VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTS-NPALNSY 61
V+++++ Q+HA ++ G S +DA +F +L ++YA + + +N +
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVF 86
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+NT++R Y+ + ++S F G+ PD T+PF++K + R G
Sbjct: 87 IWNTLIRGYAEIGN------SISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
+ +H + + GFGS Y+ N+L+H+Y+ GD+ A ++FD+MP++D+V+W S+I+G ++
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
+P EA+ L+ M G++ + T+VS+L ACA GAL++G++VH + K + +
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH-VYMIKVGLTRNLHS 259
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCN 300
S L+D+YA+ G +E A WT++I GLA +G KEAI+LF ME T
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
+ P E T +L AC + +V+E + F M++ Y IEP I+HFGC+VDLLARAG +K+A
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
+++ +MPM+P+ V+WRTL+ AC VH D++ AE Q L++ + SG Y+L SN+YAS
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 439
Query: 421 GKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKL 480
+WS+ ++R+ M + G+ K PG S +EV +HEF+MGD +HP++D I+ KL EM +L
Sbjct: 440 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 499
Query: 481 KKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCH 540
+ EGY P++S V +++++EEK +++HSEK+A+A+ LI T + S I +VKNLR C DCH
Sbjct: 500 RSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCH 559
Query: 541 EFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+KL+SK+Y R+I+VRDR RFHHFKNG CSC+DYW
Sbjct: 560 LAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/607 (39%), Positives = 354/607 (58%), Gaps = 45/607 (7%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGD-LNYARLLLTSNPALNSYY 62
+ E Q+HA++LK G + +K +F S S D L YA+++ +++
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYA--ITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN-FTFPFVLKCCARLKLARQG 121
+N M+R +S S +P +L L+ ML AP N +TFP +LK C+ L +
Sbjct: 83 WNLMIRGFSCSDEPER---SLLLYQRML-----CSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD-------------- 167
Q+H ITK+G+ +D Y +N+LI+ Y+V G+ +A LFDR+P+ D
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 168 -----------------VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
+SWT++I G V D EA++LF M + VE ++ ++ + L
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
ACA GAL G+ +H + K RI + LIDMYAK G +E A
Sbjct: 255 SACAQLGALEQGKWIHSYLN-KTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
WTA+ISG A HG +EAI F+EM+ +KP+ T TAVL+AC LV E ++F
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
M++ Y ++PTI+H+GC+VDLL RAG L EA+ F+ MP+KP+AV+W L+ AC++H++ E
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIE 433
Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
E + + + + G Y+ +N++A KW AE R LM ++G+ K PG S I ++
Sbjct: 434 LGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493
Query: 451 GALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLE-IDDEEKATQLLHHS 509
G HEF+ GD +HPE + I K M KL++ GY P+L E+LL+ +DD+E+ + HS
Sbjct: 494 GTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHS 553
Query: 510 EKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGD 569
EKLA+ YGLI+T G+ IRI+KNLR C+DCH+ KLISKIY+RDI++RDR RFHHF++G
Sbjct: 554 EKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGK 613
Query: 570 CSCKDYW 576
CSC DYW
Sbjct: 614 CSCGDYW 620
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 134/333 (40%), Gaps = 41/333 (12%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIH--MYSVFGD-LGVARELFDRMP 164
+ C R + KQ+H + K G D Y + + + S D L A+ +FD
Sbjct: 17 TMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76
Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
D W +I G D P ++ L+ RML + N T S+L+AC++ A +
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 225 VHGIVKEK-----------------------------KRIECKCNVS-TALIDMYAKSGC 254
+H + + RI +VS ++I Y K+G
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 255 IESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
++ A WT MISG + KEA+ LF EM+ +V+PD ++ LSA
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 315 CRNADLVREAYMVFSDMKK-RYGIEPTIQHFGCV-VDLLARAGCLKEA-EDFMNAMPMKP 371
C + + + S + K R ++ + GCV +D+ A+ G ++EA E F N K
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVL---GCVLIDMYAKCGEMEEALEVFKNI--KKK 311
Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
W LI H A + +MG+
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGI 344
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/460 (44%), Positives = 313/460 (68%), Gaps = 2/460 (0%)
Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
R G+ +H + + GFGS Y+ N+L+H+Y+ GD+ A ++FD+MP++D+V+W S+I+G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
++ +P EA+ L+ M G++ + T+VS+L ACA GAL++G++VH + K +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH-VYMIKVGLTR 122
Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
+ S L+D+YA+ G +E A WT++I GLA +G KEAI+LF ME
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 298 -TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
T + P E T +L AC + +V+E + F M++ Y IEP I+HFGC+VDLLARAG
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNV 416
+K+A +++ +MPM+P+ V+WRTL+ AC VH D++ AE Q L++ + SG Y+L SN+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 417 YASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEM 476
YAS +WS+ ++R+ M + G+ K PG S +EV +HEF+MGD +HP++D I+ KL EM
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Query: 477 VDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSC 536
+L+ EGY P++S V +++++EEK +++HSEK+A+A+ LI T + S I +VKNLR C
Sbjct: 363 TGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 422
Query: 537 EDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
DCH +KL+SK+Y R+I+VRDR RFHHFKNG CSC+DYW
Sbjct: 423 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 114/217 (52%), Gaps = 8/217 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD+ A + P + +N+++ ++ + P AL+L+ M + G+ PD
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE---ALALYTEM---NSKGIK-PDG 89
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
FT +L CA++ GK++H ++ K+G + + N L+ +Y+ G + A+ LFD
Sbjct: 90 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE 149
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALSM 221
M D++ VSWTSLI GL + EAIELF M G+ + T V +L AC+ G +
Sbjct: 150 MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 209
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
G + ++E+ +IE + ++D+ A++G ++ A
Sbjct: 210 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/619 (39%), Positives = 345/619 (55%), Gaps = 54/619 (8%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSP--SGDLNYARLLLTSNPALNSYY 62
T+ + Q+HA +K G + +++ F A S DL+YA + P N +
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAA--AEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+NT++R +S SD A++LF M+ + P+ FTFP VLK CA+ ++GK
Sbjct: 93 WNTIIRGFS-ESDEDKALIAITLFYEMM---SDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSV--------------------------------- 149
Q+HG K GFG D ++M+ L+ MY +
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 150 ------------FGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
GD AR LFD+M R VVSW ++I G + +A+E+F M +
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
+ N T+VSVL A + G+L +G +H + E I + +ALIDMY+K G IE
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLH-LYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
A W+AMI+G A HG +AID F +M V+P + +L+AC +
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
LV E FS M G+EP I+H+GC+VDLL R+G L EAE+F+ MP+KPD V+W+
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
L+ AC++ + E +R+ ++M DSG+Y+ SN+YAS G WS +E+R M +K
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 438 LIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEID 497
+ K PG S I++DG LHEFV+ D +HP+A I L E+ DKL+ GY P ++VLL ++
Sbjct: 508 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLE 567
Query: 498 DEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVR 557
+E+K L +HSEK+A A+GLI TS G IRIVKNLR CEDCH +KLISK+Y+R I VR
Sbjct: 568 EEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVR 627
Query: 558 DRIRFHHFKNGDCSCKDYW 576
DR RFHHF++G CSC DYW
Sbjct: 628 DRKRFHHFQDGSCSCMDYW 646
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 65/337 (19%)
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSV----FGDLGVARELF 160
FP + C + R Q+H K G D ++ + DL A ++F
Sbjct: 27 FPQINNC----RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 161 DRMPDRDVVSWTSLIDGLV--DHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSG 217
++MP R+ SW ++I G D D+ + AI LF M+ + VE N T SVL+ACA +G
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 218 ALSMGRKVHG--------------------------------------------IVKEKK 233
+ G+++HG ++ +++
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 234 RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
+ + + + +ID Y + G ++A W MISG + +G K+A+++F
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 294 LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ----HFGCVVD 349
EM+ +++P+ T+ +VL A + R + + Y + I+ ++D
Sbjct: 263 REMKKGDIRPNYVTLVSVLPA-----ISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 350 LLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+ ++ G +++A +P + + + W +I +H
Sbjct: 318 MYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIH 353
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/597 (39%), Positives = 345/597 (57%), Gaps = 35/597 (5%)
Query: 8 EALQLHAQILKLGTSNN------------------DAPRNFSK-----LFTFAAL----S 40
E Q+H +LKLG + DA + F K + ++ AL +
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 41 PSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP 100
G + A+ L P + +N M+ Y+ + + + AL LF M++ P
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN---YKEALELFKDMMKTNVR----P 264
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D T V+ CA+ G+Q+H +I GFGS+ I+NALI +YS G+L A LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
+R+P +DV+SW +LI G + EA+ LF ML +G ND T++S+L ACA GA+
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 221 MGRKVHGIV-KEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
+GR +H + K K + ++ T+LIDMYAK G IE+A W AMI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
A HG + DLF M ++PD+ T +LSAC ++ ++ +F M + Y + P
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 504
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
++H+GC++DLL +G KEAE+ +N M M+PD V+W +L+ ACK+H + E E +
Sbjct: 505 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 564
Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
+++ ++ GSY+L SN+YAS G+W+ A+ R L+N KG+ K PG S IE+D +HEF++G
Sbjct: 565 IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624
Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
D HP I+ L+EM L+K G+ P SEVL E+++E K L HHSEKLA+A+GLI
Sbjct: 625 DKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 684
Query: 520 RTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
T G+K+ IVKNLR C +CHE KLISKIY+R+II RDR RFHHF++G CSC DYW
Sbjct: 685 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 215/434 (49%), Gaps = 44/434 (10%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGD-LNYARLLLTSNPALNSYYY 63
T+ +HAQ++K+G N + SKL F LSP + L YA + + N +
Sbjct: 45 TLQSLRIIHAQMIKIGLHNTNYA--LSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIW 102
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
NTM R ++LSSDP AL L++ M+ + G+ P+++TFPFVLK CA+ K ++G+Q
Sbjct: 103 NTMFRGHALSSDPVS---ALKLYVCMI---SLGL-LPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH-- 181
+HG + K+G D Y+ +LI MY G L A ++FD+ P RDVVS+T+LI G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 182 ---------DRPV--------------------EAIELFGRMLEAGVEVNDATVVSVLRA 212
+ PV EA+ELF M++ V +++T+V+V+ A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 213 CADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
CA SG++ +GR+VH + + + ALID+Y+K G +E+A
Sbjct: 276 CAQSGSIELGRQVHLWIDDHG-FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
W +I G L KEA+ LF EM P++ TM ++L AC + + + +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 333 KRY-GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
KR G+ ++D+ A+ G ++ A N++ K + W +I+ +H +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAMIFGFAMHGRADA 453
Query: 392 AERLMKQHLEMGVD 405
+ L + ++G+
Sbjct: 454 SFDLFSRMRKIGIQ 467
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/591 (40%), Positives = 339/591 (57%), Gaps = 29/591 (4%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALN 59
+ MS+ QLHA L+ P + LF + + S D+NYA + S +
Sbjct: 59 SDMSQLKQLHAFTLR-----TTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHS 113
Query: 60 SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
S+ +NT++RA + D + A L+ ML R G +PD TFPFVLK CA +
Sbjct: 114 SFMWNTLIRA--CAHDVSRKEEAFMLYRKMLER---GESSPDKHTFPFVLKACAYIFGFS 168
Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
+GKQ+H I K GFG D Y+ N LIH+Y G L +AR++FD MP+R +VSW S+ID LV
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
A++LF R ++ E + T+ SVL ACA G+LS+G H + K ++
Sbjct: 229 RFGEYDSALQLF-REMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 240 NV--STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM- 296
+V +LI+MY K G + A W AMI G A+HG +EA++ F M
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 297 -ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
+ NV+P+ T +L AC + V + F M + Y IEP ++H+GC+VDL+ARAG
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 356 CLKEAEDFMNAMPMKPDAVLWRTLIWAC-KVHEDTERAERLMKQHLEMGVDD-------S 407
+ EA D + +MPMKPDAV+WR+L+ AC K E +E + + + D+ S
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCS 467
Query: 408 GSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEAD 467
G+Y+L S VYAS +W++ VR+LM++ G+ K PG S IE++G HEF GD +HP+
Sbjct: 468 GAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTK 527
Query: 468 NIFVKLDEMVDKLKKEGYNPKLSEVLL--EIDDEEKATQLLHHSEKLALAYGLIRTSQGS 525
I+ +L + D+L+ GY P S+ L +D K L HSE+LA+A+GLI +
Sbjct: 528 QIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQT 587
Query: 526 KIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
IRI KNLR C DCHE KLISK++ +IIVRDR+RFHHFK+G CSC DYW
Sbjct: 588 PIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/568 (38%), Positives = 334/568 (58%), Gaps = 40/568 (7%)
Query: 41 PSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP 100
P+ L YA + + N + +N ++R +S ++P+ A + ML+ P
Sbjct: 63 PTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSK---AFGFYTQMLKSRI----WP 115
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS----------VF 150
DN TFPF++K + ++ G+Q H I + GF +D Y+ N+L+HMY+ +F
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175
Query: 151 GDLGV---------------------ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
G +G ARE+FD MP R++ +W+ +I+G ++ +AI+
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
LF M GV N+ +VSV+ +CA GAL G + + V K + + TAL+DM+
Sbjct: 236 LFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVV-KSHMTVNLILGTALVDMF 294
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
+ G IE A W+++I GLA HG +A+ F +M + P + T T
Sbjct: 295 WRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFT 354
Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
AVLSAC + LV + ++ +MKK +GIEP ++H+GC+VD+L RAG L EAE+F+ M +
Sbjct: 355 AVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHV 414
Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEV 429
KP+A + L+ ACK++++TE AER+ +++ + SG Y+L SN+YA G+W +
Sbjct: 415 KPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESL 474
Query: 430 RELMNKKGLIKPPGSSRIEVDGALHEFVMG-DYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
R++M +K + KPPG S IE+DG +++F MG D HPE I K +E++ K++ GY
Sbjct: 475 RDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGN 534
Query: 489 LSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISK 548
+ ++D+EEK + + HSEKLA+AYG+++T G+ IRIVKNLR CEDCH KLIS+
Sbjct: 535 TGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISE 594
Query: 549 IYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+Y R++IVRDR RFHHF+NG CSC+DYW
Sbjct: 595 VYGRELIVRDRNRFHHFRNGVCSCRDYW 622
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/574 (38%), Positives = 334/574 (58%), Gaps = 19/574 (3%)
Query: 11 QLHAQILKLG-TSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTS--NPALNSYYYNTML 67
Q+HA +L+ N+D +F + L P D+NY+ + + NP L+ + NTM+
Sbjct: 29 QIHALLLRTSLIRNSDVFHHFLSRLALS-LIPR-DINYSCRVFSQRLNPTLS--HCNTMI 84
Query: 68 RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
RA+SLS P F +F R +PA + + F LKCC + G Q+HG
Sbjct: 85 RAFSLSQTPCEGFR-----LFRSLRRNSSLPA-NPLSSSFALKCCIKSGDLLGGLQIHGK 138
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
I GF SD +M L+ +YS + A ++FD +P RD VSW L + + R +
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 188 IELFGRM---LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
+ LF +M ++ V+ + T + L+ACA+ GAL G++VH + E + N+S
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG-LSGALNLSNT 257
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
L+ MY++ G ++ A WTA+ISGLA +G KEAI+ F EM + P+
Sbjct: 258 LVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPE 317
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKK-RYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
E+T+T +LSAC ++ LV E M F M+ + I+P + H+GCVVDLL RA L +A
Sbjct: 318 EQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSL 377
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
+ +M MKPD+ +WRTL+ AC+VH D E ER++ +E+ +++G Y+L N Y++VGKW
Sbjct: 378 IKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKW 437
Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
E+R LM +K + PG S IE+ G +HEF++ D +HP + I+ L E+ +LK
Sbjct: 438 EKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIA 497
Query: 484 GYNPKLSEVLLEID-DEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEF 542
GY +++ L ++ +EEK L +HSEKLA+A+G++ T G+ IR+ KNLR+C DCH F
Sbjct: 498 GYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNF 557
Query: 543 MKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
K +S +Y R +IVRDR RFHHFK G CSC D+W
Sbjct: 558 AKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/573 (37%), Positives = 338/573 (58%), Gaps = 9/573 (1%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
+ E Q+HA+ +KL + + S L A +NYA + ++ +N
Sbjct: 42 NIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFN 101
Query: 65 TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
TM+R Y + AL + M++R PDNFT+P +LK C RLK R+GKQ+
Sbjct: 102 TMIRGYV---NVMSFEEALCFYNEMMQRGNE----PDNFTYPCLLKACTRLKSIREGKQI 154
Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
HG + K+G +D ++ N+LI+MY G++ ++ +F+++ + SW+S++
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW 214
Query: 185 VEAIELF-GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
E + LF G E ++ ++ +VS L ACA++GAL++G +HG + + E V T
Sbjct: 215 SECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL-RNISELNIIVQT 273
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
+L+DMY K GC++ A ++AMISGLA HG + A+ +F +M ++P
Sbjct: 274 SLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEP 333
Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
D +VL+AC ++ LV+E VF++M K +EPT +H+GC+VDLL RAG L+EA +
Sbjct: 334 DHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALET 393
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
+ ++P++ + V+WRT + C+V ++ E + ++ L++ + G Y+L SN+Y+ W
Sbjct: 394 IQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMW 453
Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
+ A R + KGL + PG S +E+ G H FV D +HP+ I+ L +M +LK E
Sbjct: 454 DDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFE 513
Query: 484 GYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFM 543
GY+P L+++LL +D+EEK +L HS+K+A+A+GL+ T GS I+I +NLR C DCH +
Sbjct: 514 GYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYT 573
Query: 544 KLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
K IS IY+R+I+VRDR RFH FK G CSCKDYW
Sbjct: 574 KKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/608 (37%), Positives = 338/608 (55%), Gaps = 45/608 (7%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
EV+++S LH +K ++ N F+ GDL+ A + T+ +
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC----GDLDSACKVFTTIKEKDVV 198
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+N+M+ + P AL LF M + V A + T VL CA+++ G
Sbjct: 199 SWNSMINGFVQKGSPDK---ALELFKKM---ESEDVKA-SHVTMVGVLSACAKIRNLEFG 251
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFG------------------------------ 151
+Q+ +I + + + NA++ MY+ G
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 152 -DLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSV 209
D ARE+ + MP +D+V+W +LI + +P EA+ +F + L+ +++N T+VS
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX 269
L ACA GAL +GR +H +K K I +V++ALI MY+K G +E +
Sbjct: 372 LSACAQVGALELGRWIHSYIK-KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 430
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFS 329
W+AMI GLA HG EA+D+F +M+ NVKP+ T T V AC + LV EA +F
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490
Query: 330 DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDT 389
M+ YGI P +H+ C+VD+L R+G L++A F+ AMP+ P +W L+ ACK+H +
Sbjct: 491 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 550
Query: 390 ERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
AE + LE+ + G+++L SN+YA +GKW N +E+R+ M GL K PG S IE+
Sbjct: 551 NLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610
Query: 450 DGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLH-H 508
DG +HEF+ GD HP ++ ++ KL E+++KLK GY P++S+VL I++EE Q L+ H
Sbjct: 611 DGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLH 670
Query: 509 SEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNG 568
SEKLA+ YGLI T IR++KNLR C DCH KLIS++Y R+IIVRDR RFHHF+NG
Sbjct: 671 SEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNG 730
Query: 569 DCSCKDYW 576
CSC D+W
Sbjct: 731 QCSCNDFW 738
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 214/448 (47%), Gaps = 45/448 (10%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
++ + Q H +++ GT ++ P + SKLF AALS L YAR + P NS+ +
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSD--PYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
NT++RAY+ DP LS++ F L + P+ +TFPF++K A + G+
Sbjct: 99 NTLIRAYASGPDPV-----LSIWAF-LDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
LHG K GSD ++ N+LIH Y GDL A ++F + ++DVVSW S+I+G V
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
P +A+ELF +M V+ + T+V VL ACA L GR+V + E+ R+ ++
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLAN 271
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA---------------------- 281
A++DMY K G IE A WT M+ G A
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 282 ---------SHGLCKEAIDLFLEME-TCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
+G EA+ +F E++ N+K ++ T+ + LSAC + + S +
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
KK +GI ++ + ++ G L+++ + N++ K D +W +I +H
Sbjct: 392 KK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNE 449
Query: 392 AERLMKQHLEMGVDDSGSYILASNVYAS 419
A + + E V +G + +NV+ +
Sbjct: 450 AVDMFYKMQEANVKPNG--VTFTNVFCA 475
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/580 (39%), Positives = 336/580 (57%), Gaps = 19/580 (3%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
+ S+ QL + L G + R S+L A+SP GDL++A + P + +
Sbjct: 14 VSFSQIKQLQSHFLTAGHFQSSFLR--SRLLERCAISPFGDLSFAVQIFRYIPKPLTNDW 71
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH--GVPAPDNFTFPFVLKCCARLKLARQG 121
N ++R ++ SS P+ A S + ML++ + + D T F LK CAR +
Sbjct: 72 NAIIRGFAGSSHPSL---AFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
QLH I + G +D + L+ YS GDL A +LFD MP RDV SW +LI GLV
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSG 188
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV-HGIVKEKKRIECKCN 240
+R EA+EL+ RM G+ ++ TVV+ L AC+ G + G + HG +
Sbjct: 189 NRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN------VI 242
Query: 241 VSTALIDMYAKSGCIESAXXXXXX-XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
VS A IDMY+K G ++ A W MI+G A HG A+++F ++E
Sbjct: 243 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 302
Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
+KPD+ + A L+ACR+A LV VF++M + G+E ++H+GCVVDLL+RAG L+E
Sbjct: 303 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 361
Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYAS 419
A D + +M M PD VLW++L+ A +++ D E AE ++ EMGV++ G ++L SNVYA+
Sbjct: 362 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 421
Query: 420 VGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDK 479
G+W + VR+ M K + K PG S IE G +HEF D +H + I+ K+DE+ K
Sbjct: 422 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFK 481
Query: 480 LKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIR---TSQGSKIRIVKNLRSC 536
++++GY + VL +I +EEK L +HSEKLA+AYGL+ + S +R++ NLR C
Sbjct: 482 IREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRIC 541
Query: 537 EDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
DCH K ISKIY+R+IIVRDR+RFH FK+G CSC+D+W
Sbjct: 542 GDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/576 (38%), Positives = 336/576 (58%), Gaps = 15/576 (2%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPS-GDLNYARLLLTSNPALNSYY 62
++ E +Q+ A +K S+ + +KL F SP+ ++YAR L + +
Sbjct: 40 NSLRELMQIQAYAIK---SHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVI 96
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N+M R YS ++P F SLF+ +L G+ PDN+TFP +LK CA K +G+
Sbjct: 97 FNSMARGYSRFTNPLEVF---SLFVEILE---DGI-LPDNYTFPSLLKACAVAKALEEGR 149
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
QLH K+G + Y+ LI+MY+ D+ AR +FDR+ + VV + ++I G +
Sbjct: 150 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN 209
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK-CNV 241
RP EA+ LF M ++ N+ T++SVL +CA G+L +G+ +H K K CK V
Sbjct: 210 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK--KHSFCKYVKV 267
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
+TALIDM+AK G ++ A W+AMI A+HG ++++ +F M + NV
Sbjct: 268 NTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV 327
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
+PDE T +L+AC + V E FS M ++GI P+I+H+G +VDLL+RAG L++A
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
+F++ +P+ P +LWR L+ AC H + + AE++ ++ E+ G Y++ SN+YA
Sbjct: 388 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 447
Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
KW +R++M + +K PG S IEV+ +HEF GD + LDEMV +LK
Sbjct: 448 KWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELK 507
Query: 482 KEGYNPKLSEVL-LEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCH 540
GY P S V+ ++D+EK L +HSEKLA+ +GL+ T G+ IR+VKNLR C DCH
Sbjct: 508 LSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCH 567
Query: 541 EFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
KLIS I+ R +++RD RFHHF++G CSC D+W
Sbjct: 568 NAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/510 (39%), Positives = 293/510 (57%), Gaps = 38/510 (7%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+ FTF +LK C+ + GK +H + K G G D Y+ L+ +Y+ GD+ A+++
Sbjct: 128 PNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKV 183
Query: 160 FDRMPDR-------------------------------DVVSWTSLIDGLVDHDRPVEAI 188
FDRMP+R D+VSW +IDG H P +A+
Sbjct: 184 FDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDAL 243
Query: 189 ELFGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
LF ++L G + ++ TVV+ L AC+ GAL GR +H VK RI V T LID
Sbjct: 244 MLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS-RIRLNVKVCTGLID 302
Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKPDER 306
MY+K G +E A W AMI+G A HG ++A+ LF EM+ ++P +
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
T L AC +A LV E +F M + YGI+P I+H+GC+V LL RAG LK A + +
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNK 426
M M D+VLW +++ +CK+H D + + + + + + +SG Y+L SN+YASVG +
Sbjct: 423 MNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGV 482
Query: 427 AEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYN 486
A+VR LM +KG++K PG S IE++ +HEF GD H ++ I+ L ++ +++K GY
Sbjct: 483 AKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 542
Query: 487 PKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLI 546
P + VL ++++ EK L HSE+LA+AYGLI T GS ++I KNLR C DCH KLI
Sbjct: 543 PNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLI 602
Query: 547 SKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
SKI R I++RDR RFHHF +G CSC D+W
Sbjct: 603 SKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 11/263 (4%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G++ AR L S + +N M+ Y+ P AL LF +L G P PD
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND---ALMLFQKLL---AEGKPKPDE 259
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T L C+++ G+ +H F+ + + LI MYS G L A +F+
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND 319
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE-AGVEVNDATVVSVLRACADSGALSM 221
P +D+V+W ++I G H +A+ LF M G++ D T + L+ACA +G ++
Sbjct: 320 TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX-XXXXXWTAMISGL 280
G ++ + ++ I+ K L+ + ++G ++ A W++++
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 281 ASHG---LCKEAIDLFLEMETCN 300
HG L KE + + + N
Sbjct: 440 KLHGDFVLGKEIAEYLIGLNIKN 462
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 327/575 (56%), Gaps = 21/575 (3%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALNSYYYNTM 66
Q H Q G S +F +AL S G L AR + P N + +M
Sbjct: 97 QTHQQAFVFGYQ--------SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 67 LRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP--DNFTFPFVLKCCARLKLARQGKQL 124
+R Y L+ + A+SLF +L A D+ V+ C+R+ + +
Sbjct: 149 IRGYDLNGNA---LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVA--RELFDRMPDRDVVSWTSLIDGLVDHD 182
H F+ K GF + N L+ Y+ G+ GVA R++FD++ D+D VS+ S++
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 183 RPVEAIELFGRMLEAGV-EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
EA E+F R+++ V N T+ +VL A + SGAL +G+ +H V + +E V
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI-RMGLEDDVIV 324
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
T++IDMY K G +E+A WTAMI+G HG +A++LF M V
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
+P+ T +VL+AC +A L E + F+ MK R+G+EP ++H+GC+VDLL RAG L++A
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
D + M MKPD+++W +L+ AC++H++ E AE + + E+ + G Y+L S++YA G
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
+W + VR +M +GL+KPPG S +E++G +H F++GD HP+ + I+ L E+ KL
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 482 KEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHE 541
+ GY S V ++D+EEK L HSEKLA+A+G++ T GS + +VKNLR C DCH
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624
Query: 542 FMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+KLISKI R+ +VRD RFHHFK+G CSC DYW
Sbjct: 625 VIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 145/314 (46%), Gaps = 12/314 (3%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P +FP +K C+ L GKQ H G+ SD ++ +ALI MYS G L AR++
Sbjct: 74 PTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKV 133
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDAT------VVSVLRAC 213
FD +P R++VSWTS+I G + ++A+ LF +L + +DA +VSV+ AC
Sbjct: 134 FDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISAC 193
Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKS--GCIESAXXXXXXXXXXXXX 271
+ A + +H V K+ + +V L+D YAK G + A
Sbjct: 194 SRVPAKGLTESIHSFVI-KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 252
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKP-DERTMTAVLSACRNADLVREAYMVFSD 330
+ +++S A G+ EA ++F + V + T++ VL A ++ +R + D
Sbjct: 253 SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI-HD 311
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
R G+E + ++D+ + G ++ A + M K + W +I +H
Sbjct: 312 QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAA 370
Query: 391 RAERLMKQHLEMGV 404
+A L ++ GV
Sbjct: 371 KALELFPAMIDSGV 384
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 14/167 (8%)
Query: 159 LFDRMPDR-DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
LF+R D+ DV SW S+I L EA+ F M + + ++ ++AC+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 218 ALSMGRKVHGIVKEKKRI---ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
+ G++ H ++ + + VS+ALI MY+ G +E A WT
Sbjct: 91 DIFSGKQTH----QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERT------MTAVLSAC 315
+MI G +G +A+ LF ++ D+ + +V+SAC
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISAC 193
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/604 (35%), Positives = 324/604 (53%), Gaps = 41/604 (6%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
T E Q+HA++ GT +D ALS L+YA +L + + N
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDD--HLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALN 75
Query: 65 TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVP-APDNFTFPFVLKCCARLKLARQGKQ 123
+M+RA+ S P F F R + G PDN+T F+++ C L++ G Q
Sbjct: 76 SMIRAHCKSPVPEKSFD------FYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 124 LHGFITKMGFGSDCYIMNALIHMYS----------VF---------------------GD 152
+HG + GF +D ++ LI +Y+ VF GD
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 153 LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRA 212
+ AR+LF+ MP+RD ++W ++I G EA+ +F M GV+VN ++SVL A
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 213 CADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
C GAL GR H + E+ +I+ ++T L+D+YAK G +E A
Sbjct: 250 CTQLGALDQGRWAHSYI-ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
W++ ++GLA +G ++ ++LF M+ V P+ T +VL C V E F M+
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
+GIEP ++H+GC+VDL ARAG L++A + MPMKP A +W +L+ A +++++ E
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELG 428
Query: 393 ERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGA 452
K+ LE+ + G+Y+L SN+YA W N + VR+ M KG+ K PG S +EV+G
Sbjct: 429 VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGE 488
Query: 453 LHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKL 512
+HEF +GD +HP+ I ++ +L+ GY + V+ +ID+EEK L HSEK
Sbjct: 489 VHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKA 548
Query: 513 ALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSC 572
A+A+G++ + IRIVKNLR C DCH+ +ISKI+ R+IIVRDR RFHHFK+G CSC
Sbjct: 549 AIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSC 608
Query: 573 KDYW 576
+W
Sbjct: 609 NGFW 612
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/571 (37%), Positives = 325/571 (56%), Gaps = 19/571 (3%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+HA ++ G + + +KL T A + + + Y LL S P + + +N+++++
Sbjct: 27 QVHAHLIVTGYGRSRSL--LTKLITLACSARA--IAYTHLLFLSVPLPDDFLFNSVIKST 82
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
S P H + RR +P N+TF V+K CA L R GK +H
Sbjct: 83 SKLRLPLH-------CVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVV 135
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
GFG D Y+ AL+ YS GD+ AR++FDRMP++ +V+W SL+ G + EAI++
Sbjct: 136 SGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQV 195
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCNVSTALIDMY 249
F +M E+G E + AT VS+L ACA +GA+S+G VH I+ E + K + TALI++Y
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVK--LGTALINLY 253
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKPDERTM 308
++ G + A WTAMIS +HG ++A++LF +ME C P+ T
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTF 313
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
AVLSAC +A LV E V+ M K Y + P ++H C+VD+L RAG L EA F++ +
Sbjct: 314 VAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLD 373
Query: 369 MKPDAV---LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
A LW ++ ACK+H + + + K+ + + D+ G +++ SN+YA GK
Sbjct: 374 ATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDE 433
Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
+ +R+ M + L K G S IEV+ + F MGD +H E I+ L+ ++ + K+ GY
Sbjct: 434 VSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGY 493
Query: 486 NPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKL 545
P EV+ ++++EEK L +HSEKLA+A+GL++T + I IVKNLR CEDCH K
Sbjct: 494 APVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVDVA-ITIVKNLRICEDCHSAFKY 552
Query: 546 ISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
IS + R I VRD++RFHHF+NG CSC DYW
Sbjct: 553 ISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 133/302 (44%), Gaps = 10/302 (3%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
A ++ + +++ R+K Q +Q+H + G+G ++ LI + +
Sbjct: 6 AANSAAYEAIVRAGPRVK---QLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHL 62
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
LF +P D + S+I P+ + + RML + V ++ T SV+++CAD A
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 219 LSMGRKV--HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
L +G+ V H +V V AL+ Y+K G +E A W ++
Sbjct: 123 LRIGKGVHCHAVVSG---FGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSL 179
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
+SG +GL EAI +F +M +PD T ++LSAC V V + G
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-G 238
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
++ ++ +++L +R G + +A + + M + + W +I A H ++A L
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQAVELF 297
Query: 397 KQ 398
+
Sbjct: 298 NK 299
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/533 (39%), Positives = 303/533 (56%), Gaps = 15/533 (2%)
Query: 45 LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
LN A L P N + TM+ AYS H AL L + MLR P+ +T
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYS---KCKIHQKALELLVLMLRDNVR----PNVYT 164
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
+ VL+ C + R LH I K G SD ++ +ALI +++ G+ A +FD M
Sbjct: 165 YSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
D + W S+I G + R A+ELF RM AG AT+ SVLRAC L +G +
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 225 VH-GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
H IVK + + ++ AL+DMY K G +E A W+ MISGLA +
Sbjct: 282 AHVHIVKYDQDLI----LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
G +EA+ LF M++ KP+ T+ VL AC +A L+ + + F MKK YGI+P +H
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH 397
Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
+GC++DLL +AG L +A +N M +PDAV WRTL+ AC+V + AE K+ + +
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD 457
Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
+D+G+Y L SN+YA+ KW + E+R M +G+ K PG S IEV+ +H F++GD +H
Sbjct: 458 PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSH 517
Query: 464 PEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQ 523
P+ + KL++++ +L GY P+ + VL +++ E+ L HHSEKLALA+GL+
Sbjct: 518 PQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPI 577
Query: 524 GSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
IRI KNLR C DCH F KL SK+ R I++RD IR+HHF++G CSC DYW
Sbjct: 578 EKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 149/306 (48%), Gaps = 11/306 (3%)
Query: 94 THGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDL 153
+HG+ A D+ T+ ++KCC + +G + + G +++N LI+MY F L
Sbjct: 54 SHGLWA-DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLL 112
Query: 154 GVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
A +LFD+MP R+V+SWT++I +A+EL ML V N T SVLR+C
Sbjct: 113 NDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC 172
Query: 214 ADSGALSMGRKVH-GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
+S R +H GI+KE +E V +ALID++AK G E A
Sbjct: 173 ---NGMSDVRMLHCGIIKEG--LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
W ++I G A + A++LF M+ ++ T+T+VL AC L+ +
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
K Y + + + +VD+ + G L++A N M + D + W T+I + ++ A
Sbjct: 288 K-YDQDLILNN--ALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMISGLAQNGYSQEA 343
Query: 393 ERLMKQ 398
+L ++
Sbjct: 344 LKLFER 349
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/575 (36%), Positives = 322/575 (56%), Gaps = 13/575 (2%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
+++ E L L Q+ N+ +F A S + + A +L + + +
Sbjct: 427 SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAW 485
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
N M+ Y+ S D L LF M ++ D+FT V K C L QGKQ
Sbjct: 486 NAMMAGYTQSHDG---HKTLKLFALMHKQGERS----DDFTLATVFKTCGFLFAINQGKQ 538
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+H + K G+ D ++ + ++ MY GD+ A+ FD +P D V+WT++I G +++
Sbjct: 539 VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE 598
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--V 241
A +F +M GV ++ T+ ++ +A + AL GR++H ++ C + V
Sbjct: 599 EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA---NALKLNCTNDPFV 655
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
T+L+DMYAK G I+ A W AM+ GLA HG KE + LF +M++ +
Sbjct: 656 GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGI 715
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
KPD+ T VLSAC ++ LV EAY M YGI+P I+H+ C+ D L RAG +K+AE
Sbjct: 716 KPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAE 775
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
+ + +M M+ A ++RTL+ AC+V DTE +R+ + LE+ DS +Y+L SN+YA+
Sbjct: 776 NLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAAS 835
Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
KW R +M + K PG S IEV +H FV+ D ++ + + I+ K+ +M+ +K
Sbjct: 836 KWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIK 895
Query: 482 KEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHE 541
+EGY P+ L+++++EEK L +HSEKLA+A+GL+ T + IR++KNLR C DCH
Sbjct: 896 QEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHN 955
Query: 542 FMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
MK I+K+Y R+I++RD RFH FK+G CSC DYW
Sbjct: 956 AMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 148/306 (48%), Gaps = 7/306 (2%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D TF +L ++ G+Q+H K+G + N+LI+MY G AR +F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD-SGAL 219
D M +RD++SW S+I G+ + VEA+ LF ++L G++ + T+ SVL+A + L
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
S+ ++VH + + VSTALID Y+++ C++ A W AM++G
Sbjct: 434 SLSKQVHVHAIKINNVS-DSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAG 491
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFS-DMKKRYGIE 338
+ + LF M + D+ T+ V C + + V + +K Y ++
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
+ ++D+ + G + A+ +++P+ PD V W T+I C + + ERA + Q
Sbjct: 552 LWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 399 HLEMGV 404
MGV
Sbjct: 609 MRLMGV 614
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 6/193 (3%)
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
GK H I + +++N LI MYS G L AR +FD+MPDRD+VSW S++
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 181 HDRPV-----EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
V +A LF + + V + T+ +L+ C SG + HG K +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC-KIGL 176
Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
+ V+ AL+++Y K G ++ W M+ G +EAIDL
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 296 METCNVKPDERTM 308
+ + P+E T+
Sbjct: 237 FHSSGLNPNEITL 249
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 6/203 (2%)
Query: 13 HAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSL 72
HA+IL + P F + S G L YAR + P + +N++L AY+
Sbjct: 62 HARILTF----EENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 73 SSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMG 132
SS+ + +F + R V T +LK C + HG+ K+G
Sbjct: 118 SSECVVENIQQAFLLFRILR--QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 133 FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFG 192
D ++ AL+++Y FG + + LF+ MP RDVV W ++ ++ EAI+L
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 193 RMLEAGVEVNDATVVSVLRACAD 215
+G+ N+ T+ + R D
Sbjct: 236 AFHSSGLNPNEITLRLLARISGD 258
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
++ F M+E+ VE + T + +L +L++G++VH + K ++ VS +LI+
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMAL-KLGLDLMLTVSNSLIN 358
Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
MY K A W ++I+G+A +GL EA+ LF+++ C +KPD+ T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 308 MTAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
MT+VL A + + + + V K + + ++D +R C+KEAE
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS-TALIDAYSRNRCMKEAEILFER 477
Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
D V W ++ D + +L + G + S + LA+ V+ + G
Sbjct: 478 HNF--DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG-ERSDDFTLAT-VFKTCG 528
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/557 (38%), Positives = 321/557 (57%), Gaps = 43/557 (7%)
Query: 58 LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKL 117
L S+ +N ++RA + +S++ LR H V +PD TFPF+L
Sbjct: 22 LESFLWNIIIRAIVHNVSSPQRHSPISVY---LRMRNHRV-SPDFHTFPFLLPSFHNPLH 77
Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDL------------------------ 153
G++ H I G D ++ +L++MYS GDL
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 154 ----GV---ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-----EAGVEV 201
G+ AR+LFD MP+R+V+SW+ LI+G V + EA++LF M EA V
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
N+ T+ +VL AC GAL G+ VH + +K +E + TALIDMYAK G +E A
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYI-DKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 262 XXXXXXXX-XXXWTAMISGLASHGLCKEAIDLFLEMETC-NVKPDERTMTAVLSACRNAD 319
++AMI LA +GL E LF EM T N+ P+ T +L AC +
Sbjct: 257 FNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRG 316
Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
L+ E F M + +GI P+IQH+GC+VDL R+G +KEAE F+ +MPM+PD ++W +L
Sbjct: 317 LINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSL 376
Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
+ ++ D + E +K+ +E+ +SG+Y+L SNVYA G+W +R M KG+
Sbjct: 377 LSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGIN 436
Query: 440 KPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDE 499
K PG S +EV+G +HEFV+GD + E++ I+ LDE++ +L++ GY EVLL+++++
Sbjct: 437 KVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEK 496
Query: 500 EKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDR 559
+K L +HSEKLA+A+ L++T G+ +RI+KNLR C DCH MK+ISK++ R+I+VRD
Sbjct: 497 DKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDC 556
Query: 560 IRFHHFKNGDCSCKDYW 576
RFHHF++G CSC+D+W
Sbjct: 557 NRFHHFRDGSCSCRDFW 573
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/536 (38%), Positives = 310/536 (57%), Gaps = 9/536 (1%)
Query: 41 PSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP 100
P G ++ R + P + YNT++ Y+ S + AL M+R P
Sbjct: 189 PFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSG---MYEDALR----MVREMGTTDLKP 240
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D+FT VL + +GK++HG++ + G SD YI ++L+ MY+ + + +F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
R+ RD +SW SL+ G V + R EA+ LF +M+ A V+ SV+ ACA L
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
+G+++HG V + +++AL+DMY+K G I++A WTA+I G
Sbjct: 361 LGKQLHGYVL-RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
A HG EA+ LF EM+ VKP++ AVL+AC + LV EA+ F+ M K YG+
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 479
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
++H+ V DLL RAG L+EA +F++ M ++P +W TL+ +C VH++ E AE++ ++
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
+ ++ G+Y+L N+YAS G+W A++R M KKGL K P S IE+ H FV GD
Sbjct: 540 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD 599
Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIR 520
+HP D I L ++++++KEGY S VL ++D+E K L HSE+LA+A+G+I
Sbjct: 600 RSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIIN 659
Query: 521 TSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
T G+ IR+ KN+R C DCH +K ISKI +R+IIVRD RFHHF G+CSC DYW
Sbjct: 660 TEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 192/438 (43%), Gaps = 51/438 (11%)
Query: 3 VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
+ + S+A QLHAQ ++ + ++ + ++T L L + L S P L
Sbjct: 18 IKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFK--TLKSPPVLA--- 72
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+ +++R ++ D + AL+ F+ M PD+ FP VLK C + R G+
Sbjct: 73 WKSVIRCFT---DQSLFSKALASFVEMRASGR----CPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYS-------------VF----------GDLGV---- 155
+HGFI ++G D Y NAL++MY+ VF GD V
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 156 ---------ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
R +F+ MP +DVVS+ ++I G +A+ + M ++ + T+
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
SVL ++ + G+++HG V +K I+ + ++L+DMYAKS IE +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVI-RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
W ++++G +G EA+ LF +M T VKP ++V+ AC + +
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+ + R G I +VD+ ++ G +K A + M + D V W +I +H
Sbjct: 365 LHGYV-LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALH 422
Query: 387 EDTERAERLMKQHLEMGV 404
A L ++ GV
Sbjct: 423 GHGHEAVSLFEEMKRQGV 440
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/577 (36%), Positives = 323/577 (55%), Gaps = 15/577 (2%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLT---SNPALNS 60
+M + ++H+ ++ G ++ P F+ L F A+S +G L++A+LL S+P+ +
Sbjct: 16 NSMKKLRKIHSHVIINGLQHH--PSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSD 73
Query: 61 YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+ Y ++R +S SS P L+ +F R V PD FTF F LK C R+K +
Sbjct: 74 WNY--LIRGFSNSSSP------LNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
++HG + + GF D + +L+ YS G + +A ++FD MP RD+VSW +I
Sbjct: 126 CLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH 185
Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
+A+ ++ RM GV + T+V++L +CA AL+MG +H I + R E
Sbjct: 186 VGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDI-RCESCVF 244
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
VS ALIDMYAK G +E+A W +MI G HG EAI F +M
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
V+P+ T +L C + LV+E F M ++ + P ++H+GC+VDL RAG L+ +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
+ + A D VLWRTL+ +CK+H + E E MK+ +++ ++G Y+L +++Y++
Sbjct: 365 LEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAA 424
Query: 421 GKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKL 480
A +R+L+ L PG S IE+ +H+FV+ D HPE+ I+ +L E++++
Sbjct: 425 NDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRA 484
Query: 481 KKEGYNPKLSE-VLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDC 539
GY P+ S + D + HSEKLA+AYGL+RT+ G+ +RI KNLR C DC
Sbjct: 485 ILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDC 544
Query: 540 HEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
H F K +SK + R+IIVRDR+RFHHF +G CSC DYW
Sbjct: 545 HSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/570 (36%), Positives = 315/570 (55%), Gaps = 18/570 (3%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFT--FAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
++HA +L+ G S ++ L T L GD+ YAR + + +NT+ +
Sbjct: 29 KIHAIVLRTGFSEKNS------LLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFK 82
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
Y + P F +L L+ M GV PD FT+PFV+K ++L G LH +
Sbjct: 83 GYVRNQLP---FESLLLYKKM---RDLGV-RPDEFTYPFVVKAISQLGDFSCGFALHAHV 135
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
K GFG + L+ MY FG+L A LF+ M +D+V+W + + V A+
Sbjct: 136 VKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIAL 195
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
E F +M V+ + TVVS+L AC G+L +G +++ + K+ I+C V A +DM
Sbjct: 196 EYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR-KEEIDCNIIVENARLDM 254
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
+ K G E+A W+ MI G A +G +EA+ LF M+ ++P+ T
Sbjct: 255 HLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTF 314
Query: 309 TAVLSACRNADLVREAYMVFSDMKKR--YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
VLSAC +A LV E FS M + +EP +H+ C+VDLL R+G L+EA +F+
Sbjct: 315 LGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKK 374
Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNK 426
MP++PD +W L+ AC VH D +++ +E D ++L SN+YA+ GKW
Sbjct: 375 MPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCV 434
Query: 427 AEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYN 486
+VR M K G K S +E +G +H F GD +HP++ I+ KLDE++ K++K GY
Sbjct: 435 DKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYV 494
Query: 487 PKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLI 546
P V +++ EEK L HHSEKLA+A+GLI+ G IR++KNLR+C+DCH F K +
Sbjct: 495 PDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFV 554
Query: 547 SKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
S + +II+RD+ RFHHF+NG CSCK++W
Sbjct: 555 SSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 3/274 (1%)
Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
+Q K++H + + GF ++ L+ V GD+ AR++FD M + W +L G
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
V + P E++ L+ +M + GV ++ T V++A + G S G +H V K C
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV-KYGFGCL 143
Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
V+T L+ MY K G + SA W A ++ G A++ F +M
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
V+ D T+ ++LSAC + ++ D ++ I+ I +D+ + G +
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIY-DRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
A M + + V W T+I ++ D+ A
Sbjct: 263 AARVLFEEMKQR-NVVSWSTMIVGYAMNGDSREA 295
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/568 (35%), Positives = 324/568 (57%), Gaps = 12/568 (2%)
Query: 9 ALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
+ LH+ ++K G N+D S L + S SG LN A L P + + +
Sbjct: 130 GIDLHSLVVKCGF-NHDVAAMTSLLSIY---SGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
Y+ S H A+ LF M+ GV PD++ VL C + G+ + ++
Sbjct: 186 GYTTSG---RHREAIDLFKKMVEM---GVK-PDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
+M + ++ L+++Y+ G + AR +FD M ++D+V+W+++I G + P E I
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
ELF +ML+ ++ + ++V L +CA GAL +G ++ ++ ++ ALIDM
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI-DRHEFLTNLFMANALIDM 357
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
YAK G + A ISGLA +G K + +F + E + PD T
Sbjct: 358 YAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF 417
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
+L C +A L+++ F+ + Y ++ T++H+GC+VDL RAG L +A + MP
Sbjct: 418 LGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP 477
Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
M+P+A++W L+ C++ +DT+ AE ++K+ + + ++G+Y+ SN+Y+ G+W AE
Sbjct: 478 MRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAE 537
Query: 429 VRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
VR++MNKKG+ K PG S IE++G +HEF+ D +HP +D I+ KL+++ ++++ G+ P
Sbjct: 538 VRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPT 597
Query: 489 LSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISK 548
V ++++EEK L +HSEKLA+A GLI T G IR+VKNLR C DCHE MKLISK
Sbjct: 598 TEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISK 657
Query: 549 IYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
I +R+I+VRD RFH F NG CSC DYW
Sbjct: 658 ITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 177/370 (47%), Gaps = 16/370 (4%)
Query: 47 YARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFH-ALSLFIFMLRRPTHGVPAPDNFTF 105
Y+ LL + N + YN+++ + H FH L LF+ + + HG+ FTF
Sbjct: 63 YSYLLFSHTQFPNIFLYNSLINGFV----NNHLFHETLDLFLSIRK---HGLYL-HGFTF 114
Query: 106 PFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD 165
P VLK C R + G LH + K GF D M +L+ +YS G L A +LFD +PD
Sbjct: 115 PLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD 174
Query: 166 RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
R VV+WT+L G R EAI+LF +M+E GV+ + +V VL AC G L G
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE-- 232
Query: 226 HGIVKEKKRIECKCN--VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
IVK + +E + N V T L+++YAK G +E A W+ MI G AS+
Sbjct: 233 -WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
KE I+LFL+M N+KPD+ ++ LS+C + + S + R+ +
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGIS-LIDRHEFLTNLFM 350
Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
++D+ A+ G + + M K D V+ I + + + + Q ++G
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 404 VDDSGSYILA 413
+ GS L
Sbjct: 410 ISPDGSTFLG 419
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 21/268 (7%)
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
KQ+H + D +++N L+ F + LF ++ + SLI+G V++
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN- 240
E ++LF + + G+ ++ T VL+AC + + +G +H +V ++C N
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV-----VKCGFNH 144
Query: 241 ---VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
T+L+ +Y+ SG + A WTA+ SG + G +EAIDLF +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 298 TCNVKPDERTMTAVLSACRNADLVREA-----YMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
VKPD + VLSAC + + YM +M+K + T+ V+L A
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL------VNLYA 258
Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ G +++A ++M ++ D V W T+I
Sbjct: 259 KCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/436 (43%), Positives = 262/436 (60%), Gaps = 1/436 (0%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
N +I Y+ G + A+ LFD+MP RD VSW ++I G EA+ LF +M G
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
+N ++ S L CAD AL +G+++HG + K E C V AL+ MY K G IE A
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLV-KGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
W MI+G + HG + A+ F M+ +KPD+ TM AVLSAC + L
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
V + F M + YG+ P QH+ C+VDLL RAG L++A + M MP +PDA +W TL+
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
A +VH +TE AE + M ++SG Y+L SN+YAS G+W + ++R M KG+ K
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 441 PPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEE 500
PG S IE+ H F +GD HPE D IF L+E+ ++KK GY K S VL ++++EE
Sbjct: 646 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEE 705
Query: 501 KATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRI 560
K + +HSE+LA+AYG++R S G IR++KNLR CEDCH +K +++I R II+RD
Sbjct: 706 KERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNN 765
Query: 561 RFHHFKNGDCSCKDYW 576
RFHHFK+G CSC DYW
Sbjct: 766 RFHHFKDGSCSCGDYW 781
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 17/291 (5%)
Query: 28 RNFSKLFT-FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF 86
RN S T + G ++ A+ L P + + M+ YS S H F AL LF
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG---HSFEALRLF 397
Query: 87 IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
+ M R + +F L CA + GKQLHG + K G+ + C++ NAL+ M
Sbjct: 398 VQMEREGGR----LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 453
Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
Y G + A +LF M +D+VSW ++I G H A+ F M G++ +DAT+
Sbjct: 454 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX- 265
V+VL AC+ +G + GR+ + + + ++D+ ++G +E A
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Query: 266 XXXXXXXWTAMISGLASHG---LCKEAIDLFLEMETCNVKPDERTMTAVLS 313
W ++ HG L + A D ME P+ M +LS
Sbjct: 574 FEPDAAIWGTLLGASRVHGNTELAETAADKIFAME-----PENSGMYVLLS 619
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 163/388 (42%), Gaps = 46/388 (11%)
Query: 36 FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
+ + +G ++ AR + P N +N +L AY +S A LF R
Sbjct: 164 LSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE---ACMLF---KSRENW 217
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
+ + + FV K ++ ARQ F M D N +I Y+ G +
Sbjct: 218 ALVSWNCLLGGFVKK--KKIVEARQ------FFDSMNV-RDVVSWNTIITGYAQSGKIDE 268
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
AR+LFD P +DV +WT+++ G + + EA ELF +M E N+ + ++L
Sbjct: 269 ARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQ 324
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
+ M +++ + + C+ NVST +I YA+ G I A W
Sbjct: 325 GERMEMAKELFDV------MPCR-NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 377
Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
AMI+G + G EA+ LF++ME + + + ++ LS C AD+V A + +
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTC--ADVV--ALELGKQLHG 433
Query: 334 RY---GIEPTIQHFGCVVD-----LLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
R G E GC V + + G ++EA D M K D V W T+I
Sbjct: 434 RLVKGGYET-----GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSR 487
Query: 386 HEDTERAERLMKQHLEMGVDDSGSYILA 413
H E A R + G+ + ++A
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVA 515
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 118/271 (43%), Gaps = 40/271 (14%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
D N +I Y +LG ARELF+ MP+RDV SW +++ G + +A +F RM
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184
Query: 196 EAGVEVNDATVVSVLRACADSGAL----------------SMGRKVHGIVKEKKRIECK- 238
E ND + ++L A + + S + G VK+KK +E +
Sbjct: 185 EK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 239 ----CNVS-----TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEA 289
NV +I YA+SG I+ A WTAM+SG + + +EA
Sbjct: 241 FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEA 300
Query: 290 IDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVD 349
+LF +M N E + A+L+ + + A +F M R + + ++
Sbjct: 301 RELFDKMPERN----EVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMIT 351
Query: 350 LLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
A+ G + EA++ + MP K D V W +I
Sbjct: 352 GYAQCGKISEAKNLFDKMP-KRDPVSWAAMI 381
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/453 (40%), Positives = 270/453 (59%), Gaps = 1/453 (0%)
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+HG+ K F S + AL +YS ++ AR+LFD P++ + SW ++I G +
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
+AI LF M ++ N T+ +L ACA GALS+G+ VH +V+ E VST
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD-FESSIYVST 459
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
ALI MYAK G I A W MISG HG +EA+++F EM + P
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
T VL AC +A LV+E +F+ M RYG EP+++H+ C+VD+L RAG L+ A F
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
+ AM ++P + +W TL+ AC++H+DT A + ++ E+ D+ G ++L SN++++ +
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNY 639
Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
A VR+ K+ L K PG + IE+ H F GD +HP+ I+ KL+++ K+++
Sbjct: 640 PQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREA 699
Query: 484 GYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFM 543
GY P+ L ++++EE+ + HSE+LA+A+GLI T G++IRI+KNLR C DCH
Sbjct: 700 GYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVT 759
Query: 544 KLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
KLISKI +R I+VRD RFHHFK+G CSC DYW
Sbjct: 760 KLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 155/312 (49%), Gaps = 16/312 (5%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
T++S Q HAQI+ G N+ + +KL LS G + YAR + S + + +
Sbjct: 31 TSISHLAQTHAQIILHGFRNDISL--LTKLT--QRLSDLGAIYYARDIFLSVQRPDVFLF 86
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
N ++R +S++ P +LS+F LR+ T P++ T+ F + + + R G+
Sbjct: 87 NVLMRGFSVNESP---HSSLSVFAH-LRKSTD--LKPNSSTYAFAISAASGFRDDRAGRV 140
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+HG G S+ + + ++ MY F + AR++FDRMP++D + W ++I G ++
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 184 PVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN-- 240
VE+I++F ++ E+ ++ T++ +L A A+ L +G ++H + + C +
Sbjct: 201 YVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA---TKTGCYSHDY 257
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
V T I +Y+K G I+ + AMI G S+G + ++ LF E+
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 301 VKPDERTMTAVL 312
+ T+ +++
Sbjct: 318 ARLRSSTLVSLV 329
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 13/218 (5%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYS---LSSDPTHHFHALSLFIFMLRRPTHGVPAP 100
++ AR L +P + +N M+ Y+ L+ D A+SLF R +P
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTED------AISLF----REMQKSEFSP 418
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
+ T +L CA+L GK +H + F S Y+ ALI MY+ G + AR LF
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
D M ++ V+W ++I G H + EA+ +F ML +G+ T + VL AC+ +G +
Sbjct: 479 DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
G ++ + + E ++D+ ++G ++ A
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/538 (36%), Positives = 307/538 (57%), Gaps = 9/538 (1%)
Query: 40 SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
S GDL+ A+ + + Y +M+ Y+ A+ LF M G+ +
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE---AVKLFEEM---EEEGI-S 394
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD +T VL CCAR +L +GK++H +I + G D ++ NAL+ MY+ G + A +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-VEVNDATVVSVLRACADSGA 218
F M +D++SW ++I G + EA+ LF +LE ++ TV VL ACA A
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
GR++HG + + +V+ +L+DMYAK G + A WT MI+
Sbjct: 515 FDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
G HG KEAI LF +M ++ DE + ++L AC ++ LV E + F+ M+ IE
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
PT++H+ C+VD+LAR G L +A F+ MP+ PDA +W L+ C++H D + AE++ ++
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 399 HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVM 458
E+ +++G Y+L +N+YA KW +R+ + ++GL K PG S IE+ G ++ FV
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 753
Query: 459 GDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGL 518
GD ++PE +NI L ++ ++ +EGY+P L++ ++ EK L HSEKLA+A G+
Sbjct: 754 GDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGI 813
Query: 519 IRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
I + G IR+ KNLR C DCHE K +SK+ +R+I++RD RFH FK+G CSC+ +W
Sbjct: 814 ISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 184/341 (53%), Gaps = 16/341 (4%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GDL A + + ++N ++ + S D + ++ LF M+ + GV D+
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSG---SIGLFKKMM---SSGVEM-DS 195
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+TF V K + L+ G+QLHGFI K GFG + N+L+ Y + AR++FD
Sbjct: 196 YTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE 255
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
M +RDV+SW S+I+G V + + + +F +ML +G+E++ AT+VSV CADS +S+G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 223 RKVH--GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
R VH G+ R + CN L+DMY+K G ++SA +T+MI+G
Sbjct: 316 RAVHSIGVKACFSREDRFCNT---LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY 372
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR-YGIEP 339
A GL EA+ LF EME + PD T+TAVL+ C L+ E V +K+ G +
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI 432
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ + ++D+ A+ G ++EAE + M +K D + W T+I
Sbjct: 433 FVSN--ALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTII 470
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D T VL+ CA K + GK++ FI GF D + + L MY+ GDL A +F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
D + + W L++ L +I LF +M+ +GVE++ T V ++ + ++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
G ++HG + + E + +V +L+ Y K+ ++SA W ++I+G
Sbjct: 213 GGEQLHGFILKSGFGE-RNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
S+GL ++ + +F++M ++ D T+ +V + C ++ L+
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI 312
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/612 (33%), Positives = 326/612 (53%), Gaps = 49/612 (8%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
+V+ + E ++LH K+ T + F + + G +NYAR + +
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDP----FVETGFMDMYASCGRINYARNVFDEMSHRDVV 178
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+NTM+ Y F + + PD ++ C R R
Sbjct: 179 TWNTMIERYC-------RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE----------------------- 158
+ ++ F+ + D +++ AL+ MY+ G + +ARE
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 159 --------LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
+FD+ +D+V WT++I V+ D P EA+ +F M +G++ + ++ SV+
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
ACA+ G L + VH + +E + +++ ALI+MYAK G +++
Sbjct: 352 SACANLGILDKAKWVHSCIHVNG-LESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
W++MI+ L+ HG +A+ LF M+ NV+P+E T VL C ++ LV E +F+
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
M Y I P ++H+GC+VDL RA L+EA + + +MP+ + V+W +L+ AC++H + E
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
+ K+ LE+ D G+ +L SN+YA +W + +R +M +K + K G SRI+ +
Sbjct: 531 LGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQN 590
Query: 451 GALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSE 510
G HEF++GD H +++ I+ KLDE+V KLK GY P VL+++++EEK +L HSE
Sbjct: 591 GKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSE 650
Query: 511 KLALAYGLIRTSQGSK------IRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHH 564
KLAL +GL+ + + IRIVKNLR CEDCH F KL+SK+Y+R+IIVRDR RFH
Sbjct: 651 KLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHC 710
Query: 565 FKNGDCSCKDYW 576
+KNG CSC+DYW
Sbjct: 711 YKNGLCSCRDYW 722
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 197/428 (46%), Gaps = 59/428 (13%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPAL-NSYYYNTMLRA 69
QLHA IL+ T N +F LF + S S +L+YA + +S P+ S +N LR
Sbjct: 30 QLHAHILR--TVINHKLNSF--LFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRD 85
Query: 70 YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
S SS+P I +R H D F+F +LK +++ +G +LHG
Sbjct: 86 LSRSSEPRAT-------ILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID-----GLVDHDRP 184
K+ D ++ + MY+ G + AR +FD M RDVV+W ++I+ GLVD
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD---- 194
Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
EA +LF M ++ V ++ + +++ AC +G + R ++ + E + ++ TA
Sbjct: 195 -EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND-VRMDTHLLTA 252
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG-----------------LC- 286
L+ MYA +GC++ A TAM+SG + G +C
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 287 -------------KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
+EA+ +F EM +KPD +M +V+SAC N ++ +A V S +
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAE 393
G+E + ++++ A+ G L D MP + + V W ++I A +H + A
Sbjct: 373 N-GLESELSINNALINMYAKCGGLDATRDVFEKMPRR-NVVSWSSMINALSMHGEASDAL 430
Query: 394 RL---MKQ 398
L MKQ
Sbjct: 431 SLFARMKQ 438
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/534 (37%), Positives = 303/534 (56%), Gaps = 10/534 (1%)
Query: 45 LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
L AR +L P N + M+ YS + H AL++F M+R P+ FT
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTG---HSSEALTVFAEMMRSDG----KPNEFT 155
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
F VL C R GKQ+HG I K + S ++ ++L+ MY+ G + ARE+F+ +P
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
+RDVVS T++I G EA+E+F R+ G+ N T S+L A + L G++
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
H V ++ + + +LIDMY+K G + A W AM+ G + HG
Sbjct: 276 AHCHVL-RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 285 LCKEAIDLF-LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM-KKRYGIEPTIQ 342
L +E ++LF L + VKPD T+ AVLS C + + +F M YG +P +
Sbjct: 335 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE 394
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
H+GC+VD+L RAG + EA +F+ MP KP A + +L+ AC+VH + E + ++ +E+
Sbjct: 395 HYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEI 454
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
+++G+Y++ SN+YAS G+W++ VR +M +K + K PG S I+ + LH F D
Sbjct: 455 EPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRT 514
Query: 463 HPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTS 522
HP + + K+ E+ K+K+ GY P LS VL ++D+E+K LL HSEKLAL +GLI T
Sbjct: 515 HPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATG 574
Query: 523 QGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+G IR+ KNLR C DCH F K+ SK+++R++ +RD+ RFH +G CSC DYW
Sbjct: 575 EGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 158/346 (45%), Gaps = 18/346 (5%)
Query: 45 LNYARLL---LTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
N RL+ +S+P +Y T+L L S+ L + + HG A
Sbjct: 2 FNLMRLIHRSFSSSP--TNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDA-- 57
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
+L C + R G+++H + K + Y+ L+ Y L AR++ D
Sbjct: 58 ------LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLD 111
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
MP+++VVSWT++I EA+ +F M+ + + N+ T +VL +C + L +
Sbjct: 112 EMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL 171
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
G+++HG++ K + V ++L+DMYAK+G I+ A TA+I+G A
Sbjct: 172 GKQIHGLIV-KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD-MKKRYGIEPT 340
GL +EA+++F + + + P+ T ++L+A L+ +++
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+Q+ ++D+ ++ G L A + MP + A+ W ++ H
Sbjct: 291 LQN--SLIDMYSKCGNLSYARRLFDNMPERT-AISWNAMLVGYSKH 333
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 320/579 (55%), Gaps = 18/579 (3%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
+++S+AL++H IL G+ + P +KL S G ++YAR + Y +
Sbjct: 91 SSLSDALRVHRHILDNGSDQD--PFLATKLI--GMYSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA----R 119
N + RA +L+ H L L+ M R GV + D FT+ +VLK C +
Sbjct: 147 NALFRALTLAG---HGEEVLGLYWKMNRI---GVES-DRFTYTYVLKACVASECTVNHLM 199
Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
+GK++H +T+ G+ S YIM L+ MY+ FG + A +F MP R+VVSW+++I
Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 180 DHDRPVEAIELFGRMLEAGVEV--NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
+ + EA+ F M+ + N T+VSVL+ACA AL G+ +HG + ++ ++
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL-RRGLDS 318
Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
V +AL+ MY + G +E W ++IS HG K+AI +F EM
Sbjct: 319 ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
P T +VL AC + LV E +F M + +GI+P I+H+ C+VDLL RA L
Sbjct: 379 ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRL 438
Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVY 417
EA + M +P +W +L+ +C++H + E AER ++ + ++G+Y+L +++Y
Sbjct: 439 DEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIY 498
Query: 418 ASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMV 477
A W V++L+ +GL K PG +EV ++ FV D +P + I L ++
Sbjct: 499 AEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLA 558
Query: 478 DKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCE 537
+ +K++GY P+ VL E++ EEK +L HSEKLALA+GLI TS+G IRI KNLR CE
Sbjct: 559 EDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCE 618
Query: 538 DCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
DCH F K ISK +++I+VRD RFH FKNG CSC DYW
Sbjct: 619 DCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 9/315 (2%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
+P T+ ++ CC ++H I G D ++ LI MYS G + AR+
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS-- 216
+FD+ R + W +L L E + L+ +M GVE + T VL+AC S
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 217 --GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
L G+++H + ++ + T L+DMYA+ GC++ A W+
Sbjct: 194 TVNHLMKGKEIHAHLT-RRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252
Query: 275 AMISGLASHGLCKEAIDLFLEM--ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
AMI+ A +G EA+ F EM ET + P+ TM +VL AC + + + ++ +
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
+R G++ + +V + R G L+ + + M + D V W +LI + VH ++A
Sbjct: 313 RR-GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR-DVVSWNSLISSYGVHGYGKKA 370
Query: 393 ERLMKQHLEMGVDDS 407
++ ++ L G +
Sbjct: 371 IQIFEEMLANGASPT 385
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/517 (39%), Positives = 293/517 (56%), Gaps = 12/517 (2%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFM-LRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+N++++AY L+ P A+SLF M L R PD T + ++L R
Sbjct: 316 WNSIIKAYELNEQP---LRAISLFQEMRLSRIQ-----PDCLTLISLASILSQLGDIRAC 367
Query: 122 KQLHGFITKMG-FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
+ + GF + G F D I NA++ MY+ G + AR +F+ +P+ DV+SW ++I G
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 181 HDRPVEAIELFGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
+ EAIE++ M E G + N T VSVL AC+ +GAL G K+HG + K +
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL-KNGLYLDV 486
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
V T+L DMY K G +E A W +I+ HG ++A+ LF EM
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 546
Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
VKPD T +LSAC ++ LV E F M+ YGI P+++H+GC+VD+ RAG L+
Sbjct: 547 GVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLET 606
Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYAS 419
A F+ +M ++PDA +W L+ AC+VH + + + + E+ + G ++L SN+YAS
Sbjct: 607 ALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYAS 666
Query: 420 VGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDK 479
GKW E+R + + KGL K PG S +EVD + F G+ HP + ++ +L + K
Sbjct: 667 AGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAK 726
Query: 480 LKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDC 539
LK GY P VL +++D+EK L+ HSE+LA+A+ LI T + IRI KNLR C DC
Sbjct: 727 LKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDC 786
Query: 540 HEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
H K ISKI +R+IIVRD RFHHFKNG CSC DYW
Sbjct: 787 HSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 168/358 (46%), Gaps = 14/358 (3%)
Query: 48 ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
AR+L P + +N M+ Y S + AL+L ++G+ A D+ T
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKE---ALTL--------SNGLRAMDSVTVVS 252
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L C +G +H + K G S+ ++ N LI +Y+ FG L +++FDRM RD
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD 312
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
++SW S+I +++P+ AI LF M + ++ + T++S+ + G + R V G
Sbjct: 313 LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQG 372
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
K + A++ MYAK G ++SA W +ISG A +G
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 288 EAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
EAI+++ M E + ++ T +VL AC A +R+ + + K G+ +
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTS 491
Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
+ D+ + G L++A +P + ++V W TLI H E+A L K+ L+ GV
Sbjct: 492 LADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 154/341 (45%), Gaps = 21/341 (6%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G++ AR + Y +N M+ Y + + + SLF+ + G+ PD
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML-----SSGL-TPDY 153
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
TFP VLK C + G ++H K GF D Y+ +LIH+YS + +G AR LFD
Sbjct: 154 RTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSM 221
MP RD+ SW ++I G EA+ L G+ D+ TVVS+L AC ++G +
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNR 265
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
G +H K +E + VS LID+YA+ G + W ++I
Sbjct: 266 GVTIHS-YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV--FSDMKKRYGIEP 339
+ AI LF EM ++PD T+ ++ S +R V F+ K + +
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
TI + VV + A+ G + A N +P D + W T+I
Sbjct: 385 TIGN--AVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTII 422
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 139 IMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGR-MLEA 197
I L+++Y G++ +AR FD + +RDV +W +I G E I F ML +
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
G+ + T SVL+AC + G K+H + K V+ +LI +Y++ + +
Sbjct: 148 GLTPDYRTFPSVLKACR---TVIDGNKIHCLAL-KFGFMWDVYVAASLIHLYSRYKAVGN 203
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
A W AMISG G KEA+ L + D T+ ++LSAC
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTE 259
Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
A + S ++G+E + ++DL A G L++ + + M ++ D + W
Sbjct: 260 AGDFNRGVTIHS-YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWN 317
Query: 378 TLIWACKVHEDTERAERLMKQ 398
++I A +++E RA L ++
Sbjct: 318 SIIKAYELNEQPLRAISLFQE 338
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/548 (37%), Positives = 302/548 (55%), Gaps = 41/548 (7%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N+M+ ++ + AL +F MLR + +PD FT VL CA L+ GK
Sbjct: 246 WNSMISGFN---QRGYDLRALDIFSKMLR---DSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYS---------------------------------V 149
Q+H I GF ++NALI MYS
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 150 FGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
GD+ A+ +F + DRDVV+WT++I G H EAI LF M+ G N T+ ++
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX-XX 268
L + +LS G+++HG + I +VS ALI MYAK+G I SA
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIY-SVSVSNALITMYAKAGNITSASRAFDLIRCER 478
Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
WT+MI LA HG +EA++LF M ++PD T V SAC +A LV + F
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED 388
MK I PT+ H+ C+VDL RAG L+EA++F+ MP++PD V W +L+ AC+VH++
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 598
Query: 389 TERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
+ + ++ L + ++SG+Y +N+Y++ GKW A++R+ M + K G S IE
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Query: 449 VDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHH 508
V +H F + D HPE + I++ + ++ D++KK GY P + VL ++++E K L HH
Sbjct: 659 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 718
Query: 509 SEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNG 568
SEKLA+A+GLI T + +RI+KNLR C DCH +K ISK+ R+IIVRD RFHHFK+G
Sbjct: 719 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 778
Query: 569 DCSCKDYW 576
CSC+DYW
Sbjct: 779 FCSCRDYW 786
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 176/439 (40%), Gaps = 72/439 (16%)
Query: 30 FSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFM 89
FS +A S GD++ P +S + TM+ Y + + A+ + M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK---NIGQYHKAIRVMGDM 137
Query: 90 LRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSV 149
++ P FT VL A + GK++H FI K+G + + N+L++MY+
Sbjct: 138 VKEGIE----PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 150 FGDLGVARELFDRM-------------------------------PDRDVVSWTSLIDGL 178
GD +A+ +FDRM +RD+V+W S+I G
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRKVH----------- 226
+ A+++F +ML + D T+ SVL ACA+ L +G+++H
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 227 --------------GIVKEKKRI-------ECKCNVSTALIDMYAKSGCIESAXXXXXXX 265
G V+ +R+ + K TAL+D Y K G + A
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 266 XXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY 325
WTAMI G HG EAI+LF M +P+ T+ A+LS + +
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
+ K G ++ ++ + A+AG + A + + + D V W ++I A
Sbjct: 434 QIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 386 HEDTERAERLMKQHLEMGV 404
H E A L + L G+
Sbjct: 493 HGHAEEALELFETMLMEGL 511
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 45/286 (15%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD+N A+ + S + + M+ Y + A++LF R G P++
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS---YGEAINLF----RSMVGGGQRPNS 413
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T +L + L GKQ+HG K G + NALI MY+ G++ A FD
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDL 473
Query: 163 MP-DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
+ +RD VSWTS+I L H EA+ELF ML G+ + T V V AC +G ++
Sbjct: 474 IRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQ 533
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
GR+ ++K+ +I + ++D++ ++G ++ A
Sbjct: 534 GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF-------------------- 573
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVREA 324
+E ++PD T ++LSACR N DL + A
Sbjct: 574 --------------IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVA 605
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/568 (35%), Positives = 307/568 (54%), Gaps = 16/568 (2%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+H+QI+K N A + +A L G L+ A +L + + TM+ Y
Sbjct: 511 QIHSQIIKTNFQLN-AYVCSVLIDMYAKL---GKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 71 SLSSDPTHHF--HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
+ ++F AL+ F ML R G+ + D + CA L+ ++G+Q+H
Sbjct: 567 T-----QYNFDDKALTTFRQMLDR---GIRS-DEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
GF SD NAL+ +YS G + + F++ D ++W +L+ G EA+
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
+F RM G++ N+ T S ++A +++ + G++VH ++ K + + V ALI M
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT-KTGYDSETEVCNALISM 736
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
YAK G I A W A+I+ + HG EA+D F +M NV+P+ T+
Sbjct: 737 YAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
VLSAC + LV + F M YG+ P +H+ CVVD+L RAG L A++F+ MP
Sbjct: 797 VGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP 856
Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
+KPDA++WRTL+ AC VH++ E E LE+ +DS +Y+L SN+YA KW +
Sbjct: 857 IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 916
Query: 429 VRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
R+ M +KG+ K PG S IEV ++H F +GD NHP AD I ++ + + GY
Sbjct: 917 TRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Query: 489 LSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISK 548
+L E+ E+K + HSEKLA+++GL+ I ++KNLR C DCH ++K +SK
Sbjct: 977 CFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSK 1036
Query: 549 IYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+ R+IIVRD RFHHF+ G CSCKDYW
Sbjct: 1037 VSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 169/389 (43%), Gaps = 28/389 (7%)
Query: 5 TMSEALQLHAQILKLG-TSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
T+ QLHA KLG SNN L+ A D+ A N +
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA-----DIETALDYFLETEVENVVLW 458
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
N ML AY L D + F + R+ P+ +T+P +LK C RL G+Q
Sbjct: 459 NVMLVAYGLLDDLRNSFR-------IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+H I K F + Y+ + LI MY+ G L A ++ R +DVVSWT++I G ++
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 571
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
+A+ F +ML+ G+ ++ + + + ACA AL G+++H C S+
Sbjct: 572 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA-------CVSGFSS 624
Query: 244 ------ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
AL+ +Y++ G IE + W A++SG G +EA+ +F+ M
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
+ + T + + A +++ V + + K G + + ++ + A+ G +
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSI 743
Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+AE + K + V W +I A H
Sbjct: 744 SDAEKQFLEVSTK-NEVSWNAIINAYSKH 771
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 149/309 (48%), Gaps = 11/309 (3%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P + F VL C +++ G+QLHG + K+GF SD Y+ NAL+ +Y G+L A +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F M RD V++ +LI+GL +A+ELF RM G+E + T+ S++ AC+ G L
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
G+++H K + AL+++YAK IE+A W M
Sbjct: 406 FRGQQLHAYTT-KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM--- 461
Query: 280 LASHGL---CKEAIDLFLEMETCNVKPDERTMTAVLSAC-RNADLVREAYMVFSDMKKRY 335
L ++GL + + +F +M+ + P++ T ++L C R DL + +K +
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
+ + ++D+ A+ G L A D + K D V W T+I + ++A
Sbjct: 522 QLNAYV--CSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFDDKALTT 578
Query: 396 MKQHLEMGV 404
+Q L+ G+
Sbjct: 579 FRQMLDRGI 587
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 180/396 (45%), Gaps = 17/396 (4%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
++ E +LH+QILKLG +N KLF F GDL A + P + +N
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLS--EKLFDFYLFK--GDLYGAFKVFDEMPERTIFTWN 155
Query: 65 TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG-KQ 123
M++ + + F LF+ M+ P+ TF VL+ C +A +Q
Sbjct: 156 KMIKELASRNLIGEVF---GLFVRMVSENV----TPNEGTFSGVLEACRGGSVAFDVVEQ 208
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+H I G + N LI +YS G + +AR +FD + +D SW ++I GL ++
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
EAI LF M G+ SVL AC +L +G ++HG+V K V
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL-KLGFSSDTYVCN 327
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
AL+ +Y G + SA + +I+GL+ G ++A++LF M ++P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 304 DERTMTAVLSACR-NADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
D T+ +++ AC + L R + K + I+ G +++L A+ ++ A D
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALD 445
Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
+ ++ + VLW ++ A + +D + R+ +Q
Sbjct: 446 YFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/568 (36%), Positives = 311/568 (54%), Gaps = 17/568 (2%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
QLH ++K G + +N A + L+ RL N + M+ +
Sbjct: 316 QLHCSVVKYGFLFD---QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
L +D A+ LF M R+ P+ FT+ +L + + ++H + K
Sbjct: 373 -LQNDGKEE--AVDLFSEMKRKGVR----PNEFTYSVILTALPVISPS----EVHAQVVK 421
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
+ + AL+ Y G + A ++F + D+D+V+W++++ G AI++
Sbjct: 422 TNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKM 481
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGA-LSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
FG + + G++ N+ T S+L CA + A + G++ HG K R++ VS+AL+ MY
Sbjct: 482 FGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAI-KSRLDSSLCVSSALLTMY 540
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
AK G IESA W +MISG A HG +A+D+F EM+ VK D T
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600
Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
V +AC +A LV E F M + I PT +H C+VDL +RAG L++A + MP
Sbjct: 601 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660
Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEV 429
+ +WRT++ AC+VH+ TE ++ + M +DS +Y+L SN+YA G W +A+V
Sbjct: 661 PAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKV 720
Query: 430 RELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKL 489
R+LMN++ + K PG S IEV + F+ GD +HP D I++KL+++ +LK GY P
Sbjct: 721 RKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDT 780
Query: 490 SEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKI 549
S VL +IDDE K L HSE+LA+A+GLI T +GS + I+KNLR C DCH +KLI+KI
Sbjct: 781 SYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKI 840
Query: 550 YQRDIIVRDRIRFHHF-KNGDCSCKDYW 576
+R+I+VRD RFHHF +G CSC D+W
Sbjct: 841 EEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 184/396 (46%), Gaps = 21/396 (5%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
QLH Q +K G + D S + T+ S D R + N + T++ Y
Sbjct: 114 QLHCQCIKFGFLD-DVSVGTSLVDTYMKGSNFKD---GRKVFDEMKERNVVTWTTLISGY 169
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ +S + L+LF+ M T P++FTF L A + +G Q+H + K
Sbjct: 170 ARNS---MNDEVLTLFMRMQNEGTQ----PNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
G + N+LI++Y G++ AR LFD+ + VV+W S+I G + +EA+ +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH-GIVKEKKRIECKCNVSTALIDMY 249
F M V +++++ SV++ CA+ L ++H +VK + N+ TAL+ Y
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD--QNIRTALMVAY 340
Query: 250 AK-SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
+K + +++ WTAMISG + +EA+DLF EM+ V+P+E T
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
+ +L+A ++ + + +K Y T+ ++D + G ++EA + +
Sbjct: 401 SVILTAL---PVISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEAAKVFSGID 455
Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
K D V W ++ +TE A ++ + + G+
Sbjct: 456 DK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 130/291 (44%), Gaps = 9/291 (3%)
Query: 32 KLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLR 91
+++ F +S S N A L +P + Y ++L +S A LF+ + R
Sbjct: 31 RIYCFGTVSSSRLYN-AHNLFDKSPGRDRESYISLLFGFSRDGRTQE---AKRLFLNIHR 86
Query: 92 RPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFG 151
D F VLK A L G+QLH K GF D + +L+ Y
Sbjct: 87 LGME----MDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS 142
Query: 152 DLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
+ R++FD M +R+VV+WT+LI G + E + LF RM G + N T + L
Sbjct: 143 NFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG 202
Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX 271
A+ G G +VH +V K ++ VS +LI++Y K G + A
Sbjct: 203 VLAEEGVGGRGLQVHTVVV-KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 261
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR 322
W +MISG A++GL EA+ +F M V+ E + +V+ C N +R
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 21/234 (8%)
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
A LFD+ P RD S+ SL+ G R EA LF + G+E++ + SVL+ A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 216 SGALSMGRKVHGIVKEKKRIECKC---------NVSTALIDMYAKSGCIESAXXXXXXXX 266
GR++H C+C +V T+L+D Y K +
Sbjct: 106 LCDELFGRQLH----------CQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
WT +ISG A + + E + LF+ M+ +P+ T A L +
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
V + + K G++ TI +++L + G +++A + +K V W ++I
Sbjct: 216 VHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMI 267
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/606 (34%), Positives = 321/606 (52%), Gaps = 45/606 (7%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLF-TFAALSPSGDLNYARLLLTSNPALNSYYYN 64
+++ Q+H +L+ G + + +KL T L D YAR ++ N + +
Sbjct: 62 LNQIKQIHGHVLRKGL--DQSCYILTKLIRTLTKLGVPMD-PYARRVIEPVQFRNPFLWT 118
Query: 65 TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
++R Y++ A++++ M + P +FTF +LK C +K G+Q
Sbjct: 119 AVIRGYAIEGKFDE---AIAMYGCMRKEEI----TPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI--------- 175
H ++ Y+ N +I MY + AR++FD MP+RDV+SWT LI
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 176 ----------------------DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
G + +P EA+E F RM ++G+ ++ TV + AC
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 214 ADSGALSMG-RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
A GA R V K + +ALIDMY+K G +E A
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFT 351
Query: 273 WTAMISGLASHGLCKEAIDLFLEMET-CNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
+++MI GLA+HG +EA+ LF M T +KP+ T L AC ++ LV + VF M
Sbjct: 352 YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
+ +G++PT H+ C+VDLL R G L+EA + + M ++P +W L+ AC++H + E
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEI 471
Query: 392 AERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS-RIEVD 450
AE + E+ D G+YIL SNVYAS G W VR+L+ +KGL K P S ++ +
Sbjct: 472 AEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Query: 451 GALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSE 510
G +H+F G+ NHP ++ I KL+E+V++L GY P LS V ++ D K L+ H+E
Sbjct: 532 GQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTE 591
Query: 511 KLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDC 570
KLALA+ L+ T++ S I I+KNLR C DCH+FM+L S++ + II+RD +RFHHF++GDC
Sbjct: 592 KLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDC 651
Query: 571 SCKDYW 576
SC D+W
Sbjct: 652 SCGDFW 657
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 201/528 (38%), Positives = 292/528 (55%), Gaps = 37/528 (7%)
Query: 81 HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIM 140
AL +F M+ PD + + C++L+ GK HG++ + GF S I
Sbjct: 320 EALGVFNLMMDSGVR----PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 141 NALIHMYSVFGDLGVARELFDRMPDR-------------------------------DVV 169
NALI MY A +FDRM ++ ++V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 170 SWTSLIDGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGI 228
SW ++I GLV EAIE+F M + GV + T++S+ AC GAL + + ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKE 288
+ EK I+ + T L+DM+++ G ESA WTA I +A G +
Sbjct: 496 I-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 289 AIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVV 348
AI+LF +M +KPD L+AC + LV++ +F M K +G+ P H+GC+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 349 DLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG 408
DLL RAG L+EA + MPM+P+ V+W +L+ AC+V + E A ++ + + +G
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 409 SYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADN 468
SY+L SNVYAS G+W++ A+VR M +KGL KPPG+S I++ G HEF GD +HPE N
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 469 IFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIR 528
I LDE+ + G+ P LS VL+++D++EK L HSEKLA+AYGLI +++G+ IR
Sbjct: 735 IEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIR 794
Query: 529 IVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
IVKNLR C DCH F K SK+Y R+II+RD RFH+ + G CSC D+W
Sbjct: 795 IVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 163/314 (51%), Gaps = 13/314 (4%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAA-LSPSGDLNYARLLLTSNPALNS-YY 62
T+ E H + K G N+ + +KL + L L++A+ + ++ + + +
Sbjct: 44 TIDELKMFHRSLTKQGLDNDVS--TITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
YN+++R Y+ S A+ LF LR G+ +PD +TFPF L CA+ + G
Sbjct: 102 YNSLIRGYASSGLCNE---AILLF---LRMMNSGI-SPDKYTFPFGLSACAKSRAKGNGI 154
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
Q+HG I KMG+ D ++ N+L+H Y+ G+L AR++FD M +R+VVSWTS+I G D
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 183 RPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
+A++LF RM+ + V N T+V V+ ACA L G KV+ ++ IE +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVNDLM 273
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
+AL+DMY K I+ A AM S GL +EA+ +F M V
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 302 KPDERTMTAVLSAC 315
+PD +M + +S+C
Sbjct: 334 RPDRISMLSAISSC 347
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 187/432 (43%), Gaps = 45/432 (10%)
Query: 9 ALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
+Q+H I+K+G + + +N L F A G+L+ AR + N + +M+
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQN--SLVHFYA--ECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
Y+ A+ LF M+R P++ T V+ CA+L+ G++++ FI
Sbjct: 209 GYARRDFAKD---AVDLFFRMVRDEE---VTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
G + +++AL+ MY + VA+ LFD ++ ++ V EA+
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
+F M+++GV + +++S + +C+ + G+ HG V + E N+ ALIDM
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL-RNGFESWDNICNALIDM 381
Query: 249 YAK-------------------------------SGCIESAXXXXXXXXXXXXXXWTAMI 277
Y K +G +++A W +I
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 278 SGLASHGLCKEAIDLFLEMETC-NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
SGL L +EAI++F M++ V D TM ++ SAC + + A ++ ++K G
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-G 500
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
I+ ++ +VD+ +R G + A N++ + D W I A + + ERA L
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAERAIELF 559
Query: 397 KQHLEMGVDDSG 408
+E G+ G
Sbjct: 560 DDMIEQGLKPDG 571
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 37 AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHG 96
A +G+++ A + P N +NT++ S ++ +F + G
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS-----LFEEAIEVFCSMQSQEG 465
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
V A D T + C L K ++ +I K G D + L+ M+S GD A
Sbjct: 466 VNA-DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
+F+ + +RDV +WT+ I + AIELF M+E G++ + V L AC+
Sbjct: 525 MSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHG 584
Query: 217 GALSMGR-------KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
G + G+ K+HG+ E C ++D+ ++G +E A
Sbjct: 585 GLVQQGKEIFYSMLKLHGVSPEDVHYGC-------MVDLLGRAGLLEEA 626
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/541 (35%), Positives = 307/541 (56%), Gaps = 9/541 (1%)
Query: 37 AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHG 96
A+ + G L+YA+ + + +N ++ ++ S+DP A L+ G
Sbjct: 438 ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA------HLQMKISG 491
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
+ PD+FT +L C++LK R GK++HGFI + D ++ +++ +Y G+L
Sbjct: 492 L-LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
+ LFD M D+ +VSW ++I G + + P A+ +F +M+ G+++ +++ V AC+
Sbjct: 551 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 610
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
+L +GR+ H K +E ++ +LIDMYAK+G I + W AM
Sbjct: 611 PSLRLGREAHAYAL-KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 669
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
I G HGL KEAI LF EM+ PD+ T VL+AC ++ L+ E MK +G
Sbjct: 670 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG 729
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFM-NAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
++P ++H+ CV+D+L RAG L +A + M + D +W++L+ +C++H++ E E++
Sbjct: 730 LKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKV 789
Query: 396 MKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHE 455
+ E+ + +Y+L SN+YA +GKW + +VR+ MN+ L K G S IE++ +
Sbjct: 790 AAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFS 849
Query: 456 FVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALA 515
FV+G+ + I + K+ K GY P V ++ +EEK QL HSEKLAL
Sbjct: 850 FVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALT 909
Query: 516 YGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDY 575
YGLI+TS+G+ IR+ KNLR C DCH KLISK+ +R+I+VRD RFHHFKNG CSC DY
Sbjct: 910 YGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDY 969
Query: 576 W 576
W
Sbjct: 970 W 970
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 15/291 (5%)
Query: 31 SKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFML 90
+++ T A+ S D +R + + + N + +N ++ +YS + + L FI M+
Sbjct: 124 TRIITMYAMCGSPD--DSRFVFDALRSKNLFQWNAVISSYSRNE---LYDEVLETFIEMI 178
Query: 91 RRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVF 150
PD+FT+P V+K CA + G +HG + K G D ++ NAL+ Y
Sbjct: 179 STTD---LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 235
Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA---GVEVND-ATV 206
G + A +LFD MP+R++VSW S+I D+ E+ L G M+E G + D AT+
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
V+VL CA + +G+ VHG K R++ + ++ AL+DMY+K GCI +A
Sbjct: 296 VTVLPVCAREREIGLGKGVHGWAV-KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 354
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETC--NVKPDERTMTAVLSAC 315
W M+ G ++ G D+ +M +VK DE T+ + C
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 155/373 (41%), Gaps = 26/373 (6%)
Query: 40 SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVP- 98
S G + A+++ N N +NTM+ +S D F +LR+ G
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD-------VLRQMLAGGED 390
Query: 99 -APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
D T + C K+LH + K F + + NA + Y+ G L A+
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
+F + + V SW +LI G + P +++ +M +G+ + TV S+L AC+
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK 510
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
+L +G++VHG + + +E V +++ +Y G + + W +I
Sbjct: 511 SLRLGKEVHGFII-RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVREAYMVFSDMKKR 334
+G +G A+ +F +M ++ +M V AC + L REA+
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA-------- 621
Query: 335 YGIEPTIQ---HFGC-VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
Y ++ ++ C ++D+ A+ G + ++ N + K A W +I +H +
Sbjct: 622 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHGLAK 680
Query: 391 RAERLMKQHLEMG 403
A +L ++ G
Sbjct: 681 EAIKLFEEMQRTG 693
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 128/306 (41%), Gaps = 11/306 (3%)
Query: 107 FVLKCCARLKLARQGKQLHGFIT-KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD 165
+L+ + K G+++H ++ +D + +I MY++ G +R +FD +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 166 RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRK 224
+++ W ++I ++ E +E F M+ + D T V++ACA + +G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
VHG+V + +E V AL+ Y G + A W +MI + +G
Sbjct: 209 VHGLVVKTGLVE-DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 285 LCKEAIDLFLEMETCN----VKPDERTMTAVLSACRNADLVREAYMVFS-DMKKRYGIEP 339
+E+ L EM N PD T+ VL C + V +K R E
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
+ + ++D+ ++ GC+ A+ + M + V W T++ DT +++Q
Sbjct: 328 VLNN--ALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 400 LEMGVD 405
L G D
Sbjct: 385 LAGGED 390
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/526 (37%), Positives = 298/526 (56%), Gaps = 19/526 (3%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N M+ YS + H AL LFI M + G+ A ++ T V+ C R + +
Sbjct: 372 WNAMIAGYSQNE---HDKEALLLFIGM--EESAGLLA-NSTTMAGVVPACVRSGAFSRKE 425
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
+HGF+ K G D ++ N L+ MYS G + +A +F +M DRD+V+W ++I G V +
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 183 RPVEAIELFGRM--LEAGV---------EVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
+A+ L +M LE V + N T++++L +CA AL+ G+++H
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI- 544
Query: 232 KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAID 291
K + V +AL+DMYAK GC++ + W +I HG +EAID
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 292 LFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
L M VKP+E T +V +AC ++ +V E +F MK YG+EP+ H+ CVVDLL
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 664
Query: 352 ARAGCLKEAEDFMNAMPMKPD-AVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSY 410
RAG +KEA MN MP + A W +L+ A ++H + E E + +++ + + Y
Sbjct: 665 GRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHY 724
Query: 411 ILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIF 470
+L +N+Y+S G W EVR M ++G+ K PG S IE +H+FV GD +HP+++ +
Sbjct: 725 VLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLS 784
Query: 471 VKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIV 530
L+ + ++++KEGY P S VL ++++EK L HSEKLA+A+G++ TS G+ IR+
Sbjct: 785 GYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVA 844
Query: 531 KNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
KNLR C DCH K ISKI R+II+RD RFH FKNG CSC DYW
Sbjct: 845 KNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 161/350 (46%), Gaps = 19/350 (5%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCY-IMNALIHMYSVFGDLGVARE 158
PDN+ FP +LK A L+ GKQ+H + K G+G D + N L+++Y GD G +
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD--- 215
+FDR+ +R+ VSW SLI L ++ A+E F ML+ VE + T+VSV+ AC++
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
L MG++VH K E + L+ MY K G + S+ W
Sbjct: 215 PEGLMMGKQVHAYGLRKG--ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
++S L + EA++ EM V+PDE T+++VL AC + +++R + + K
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
++ +VD+ + + M LW +I +E + A L
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 396 MKQHLEMGVDDSGSYILASNVYASV-------GKWSNKAEVRELMNKKGL 438
+G+++S + S A V G +S K + + K+GL
Sbjct: 392 F-----IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 151/319 (47%), Gaps = 11/319 (3%)
Query: 100 PDNFTFPFVLKCCARLKLAR---QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
P +FT V+ C+ L + GKQ+H + + G + +I+N L+ MY G L +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 255
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
+ L RD+V+W +++ L +++ +EA+E M+ GVE ++ T+ SVL AC+
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
L G+++H + ++ V +AL+DMY + S W AM
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 277 ISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSAC-RNADLVREAYMVFSDMKKR 334
I+G + + KEA+ LF+ M E+ + + TM V+ AC R+ R+ + +K+
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 435
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
+ +Q+ ++D+ +R G + A M + D V W T+I E E A
Sbjct: 436 LDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYVFSEHHEDALL 492
Query: 395 LMK--QHLEMGVDDSGSYI 411
L+ Q+LE V S +
Sbjct: 493 LLHKMQNLERKVSKGASRV 511
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 171 WTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVK 230
W L+ V + EA+ + M+ G++ ++ ++L+A AD + +G+++H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 231 EKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAI 290
+ V+ L+++Y K G + W ++IS L S + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 291 DLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI-EPTIQHF--GCV 347
+ F M NV+P T+ +V++AC N + E M+ + YG+ + + F +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHA-YGLRKGELNSFIINTL 242
Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA-CKVHEDTERAERLMKQHLEMGVD 405
V + + G L ++ + + + D V W T++ + C+ + E E L + LE GV+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLE-GVE 299
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 359 bits (921), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/535 (37%), Positives = 292/535 (54%), Gaps = 11/535 (2%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G ++ A L P N + TM+ + AL LF MLR P
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGE---ALDLFKNMLRCCIKSTSRP-- 227
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
F V+ CA G Q+HG I K+GF + Y+ +LI Y+ +G +R++FD
Sbjct: 228 --FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE 285
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
V WT+L+ G + + +A+ +F ML + N +T S L +C+ G L G
Sbjct: 286 KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG 345
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
+++HG V K +E V +L+ MY+ SG + A W ++I G A
Sbjct: 346 KEMHG-VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQ 404
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG-IEPTI 341
HG K A +F +M N +PDE T T +LSAC + + + +F M I+ I
Sbjct: 405 HGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKI 464
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
QH+ C+VD+L R G LKEAE+ + M +KP+ ++W L+ AC++H D +R E+
Sbjct: 465 QHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFN 524
Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDY 461
+ S +Y+L SN+YAS G+WSN +++R M K G++K PGSS + + G HEF GD
Sbjct: 525 LDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD- 583
Query: 462 NHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRT 521
P I+ KL+ + +KLK+ GY P L +++DE+K L +HSE+LA+A+GLI T
Sbjct: 584 -QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINT 642
Query: 522 SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+GS + ++KNLR CEDCH +KLIS + R+I++RD IRFHHFKNG CSC DYW
Sbjct: 643 VEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 9/270 (3%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
D N+++H Y FG + A +LF +MP ++V+SWT++I GL ++R EA++LF ML
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
++ V+ ACA++ A MG +VHG++ K + VS +LI YA I
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII-KLGFLYEEYVSASLITFYANCKRI 276
Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
+ WTA++SG + + ++A+ +F M ++ P++ T + L++C
Sbjct: 277 GDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSC 336
Query: 316 R---NADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD 372
D +E + V + G+E +V + + +G + +A + K
Sbjct: 337 SALGTLDWGKEMHGV----AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKS 391
Query: 373 AVLWRTLIWACKVHEDTERAERLMKQHLEM 402
V W ++I C H + A + Q + +
Sbjct: 392 IVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 9/176 (5%)
Query: 143 LIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
+I Y+ L A LFD MP RDVVSW S+I G V+ A++LF M E V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128
Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX 262
+ +++ C SG + ++ + K +++ Y + G ++ A
Sbjct: 129 -VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA-----AWNSMVHGYLQFGKVDDALKLF 182
Query: 263 XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
WT MI GL + EA+DLF M C +K R T V++AC NA
Sbjct: 183 KQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 295/534 (55%), Gaps = 7/534 (1%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G L AR L +SY + M+ Y P AL L+ M R P P+
Sbjct: 165 GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEE---ALVLYSLMQRVPN---SRPNI 218
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
FT + A +K R+GK++HG I + G SD + ++L+ MY G + AR +FD+
Sbjct: 219 FTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDK 278
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ ++DVVSWTS+ID R E LF ++ + N+ T VL ACAD +G
Sbjct: 279 IVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELG 338
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
++VHG + + + S++L+DMY K G IESA WT++I G A
Sbjct: 339 KQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQ 397
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
+G EA+ F + KPD T VLSAC +A LV + F + +++ + T
Sbjct: 398 NGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSD 457
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
H+ C+VDLLAR+G ++ + ++ MPMKP LW +++ C + + + AE ++ ++
Sbjct: 458 HYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKI 517
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
++ +Y+ +N+YA+ GKW + ++R+ M + G+ K PGSS E+ H F+ D +
Sbjct: 518 EPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTS 577
Query: 463 HPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTS 522
HP + I L E+ K+K+EGY P S VL +++DE+K L++HSEKLA+A+ ++ T
Sbjct: 578 HPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTE 637
Query: 523 QGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+G+ I++ KNLRSC DCH +K IS I +R I VRD RFH F+NG CSC DYW
Sbjct: 638 EGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 148/344 (43%), Gaps = 49/344 (14%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS----------V 149
P T+ +++ C++ + +GK++H I GF I N L+ MY+ V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 150 F---------------------GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
F G L AR+LFD M ++D SWT+++ G V D+P EA+
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 189 ELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
L+ M N TV + A A + G+++HG + + ++ + ++L+D
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV-RAGLDSDEVLWSSLMD 261
Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
MY K GCI+ A WT+MI +E LF E+ +P+E T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 308 MTAVLSACRNADLVRE-------AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
VL+AC ADL E YM R G +P +VD+ + G ++ A
Sbjct: 322 FAGVLNAC--ADLTTEELGKQVHGYMT------RVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
+ ++ P KPD V W +LI C + + A + L+ G
Sbjct: 374 KHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 28/273 (10%)
Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYS---VFG----DLGVARELFDRMPDRDVVS 170
AR+ LHGFI K S +A + +S F D GV E R
Sbjct: 6 ARKLTTLHGFILKRNLSS----FHASLKRFSDKKFFNPNHEDGGVVVERLCRAN-----R 56
Query: 171 WTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVK 230
+ ID L EA++L GR + +T ++++ C+ + AL G+KVH ++
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKKPPA----STYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 231 EKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAI 290
+ + L+ MYAK G + A W M++G A GL +EA
Sbjct: 113 TSGFVP-GIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEAR 171
Query: 291 DLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDL 350
LF EM + D + TA+++ D EA +++S M++ P I V
Sbjct: 172 KLFDEM----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAA 227
Query: 351 LARAGCLKEAEDFMNAM---PMKPDAVLWRTLI 380
A C++ ++ + + D VLW +L+
Sbjct: 228 AAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLM 260
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 288/499 (57%), Gaps = 8/499 (1%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
A++LF M+ T G P++FTF K C L R GKQ+ G K G S+ + N
Sbjct: 356 AINLFSEMI---TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVAN 412
Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
++I M+ + A+ F+ + ++++VS+ + +DG + +A +L + E + V
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
+ T S+L A+ G++ G ++H V K + C V ALI MY+K G I++A
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
WT+MI+G A HG ++ F +M VKP+E T A+LSAC + LV
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
E + F+ M + + I+P ++H+ C+VDLL RAG L +A +F+N MP + D ++WRT +
Sbjct: 592 SEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
AC+VH +TE + ++ LE+ ++ +YI SN+YA GKW E+R M ++ L+K
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE 711
Query: 442 PGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEK 501
G S IEV +H+F +GD HP A I+ +LD ++ ++K+ GY P VL ++++E
Sbjct: 712 GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEEND 771
Query: 502 ATQ----LLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVR 557
+ L HSEK+A+A+GLI TS+ +R+ KNLR C DCH MK IS + R+I++R
Sbjct: 772 EAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLR 831
Query: 558 DRIRFHHFKNGDCSCKDYW 576
D RFHHFK+G CSC DYW
Sbjct: 832 DLNRFHHFKDGKCSCNDYW 850
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 4/224 (1%)
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
G+ D+ TF +LK C R + R GK +H + + D + N+LI +YS GD
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAK 115
Query: 156 ARELFD---RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRA 212
A ++F+ R RDVVSW++++ ++ R ++AI++F LE G+ ND +V+RA
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 213 CADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKS-GCIESAXXXXXXXXXXXXX 271
C++S + +GR G + + E V +LIDM+ K E+A
Sbjct: 176 CSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVV 235
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
WT MI+ G +EAI FL+M + D+ T+++V SAC
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 192/414 (46%), Gaps = 22/414 (5%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMG-FGSDCYIMNALIHMYSVFGDLGV--A 156
P+++ + V++ C+ G+ GF+ K G F SD + +LI M+ V G+ A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF-VKGENSFENA 222
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
++FD+M + +VV+WT +I + P EAI F M+ +G E + T+ SV ACA+
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK---SGCIESAXXXXXXXXXXXXXXW 273
LS+G+++H ++ +V +L+DMYAK G ++ W
Sbjct: 283 ENLSLGKQLHSWAIRSGLVD---DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 274 TAMISG-LASHGLCKEAIDLFLEMET-CNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
TA+I+G + + L EAI+LF EM T +V+P+ T ++ AC N R V
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
KR G+ V+ + ++ +++A+ ++ K + V + T + + + E+
Sbjct: 400 FKR-GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQ 457
Query: 392 AERLMKQ--HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI--KPPGSSRI 447
A +L+ + E+GV L S V A+VG ++ + K GL +P ++ I
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGV-ANVGSIRKGEQIHSQVVKLGLSCNQPVCNALI 516
Query: 448 EVDGALHEFVMGD--YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDE 499
+ +N E N+ + M+ K G+ ++ E ++ +E
Sbjct: 517 SMYSKCGSIDTASRVFNFMENRNV-ISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 185 VEAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
V A++L R G+ D+ T S+L++C + +G+ VH + E IE +
Sbjct: 46 VSALDLMAR---DGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFD-IEPDSVLYN 101
Query: 244 ALIDMYAKSG---CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
+LI +Y+KSG E W+AM++ ++G +AI +F+E
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC-VVDLLARA-GCLK 358
+ P++ TAV+ AC N+D V + + K E + GC ++D+ + +
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC-VGCSLIDMFVKGENSFE 220
Query: 359 EAEDFMNAMPMKPDAVLWRTLIWAC 383
A + M + + V W +I C
Sbjct: 221 NAYKVFDKMS-ELNVVTWTLMITRC 244
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 200/527 (37%), Positives = 291/527 (55%), Gaps = 37/527 (7%)
Query: 81 HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIM 140
AL +F M+ PD + + C++L+ GK HG++ + GF S I
Sbjct: 320 EALGVFNLMMDSGVR----PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 141 NALIHMYSVFGDLGVARELFDRMPDR-------------------------------DVV 169
NALI MY A +FDRM ++ ++V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 170 SWTSLIDGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGI 228
SW ++I GLV EAIE+F M + GV + T++S+ AC GAL + + ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKE 288
+ EK I+ + T L+DM+++ G ESA WTA I +A G +
Sbjct: 496 I-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 289 AIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVV 348
AI+LF +M +KPD L+AC + LV++ +F M K +G+ P H+GC+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 349 DLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG 408
DLL RAG L+EA + MPM+P+ V+W +L+ AC+V + E A ++ + + +G
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 409 SYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADN 468
SY+L SNVYAS G+W++ A+VR M +KGL KPPG+S I++ G HEF GD +HPE N
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 469 IFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIR 528
I LDE+ + G+ P LS VL+++D++EK L HSEKLA+AYGLI +++G+ IR
Sbjct: 735 IEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIR 794
Query: 529 IVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDY 575
IVKNLR C DCH F K SK+Y R+II+RD RFH+ + G CSC D+
Sbjct: 795 IVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 164/314 (52%), Gaps = 13/314 (4%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAA-LSPSGDLNYARLLLTSNPALNS-YY 62
T+ E H + K G N+ + +KL + L L++A+ + ++ + + +
Sbjct: 44 TIDELKMFHRSLTKQGLDNDVS--TITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
YN+++R Y+ S A+ LF+ M+ G+ +PD +TFPF L CA+ + G
Sbjct: 102 YNSLIRGYASSGLCNE---AILLFLRMM---NSGI-SPDKYTFPFGLSACAKSRAKGNGI 154
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
Q+HG I KMG+ D ++ N+L+H Y+ G+L AR++FD M +R+VVSWTS+I G D
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 183 RPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
+A++LF RM+ + V N T+V V+ ACA L G KV+ ++ IE +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVNDLM 273
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
+AL+DMY K I+ A AM S GL +EA+ +F M V
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 302 KPDERTMTAVLSAC 315
+PD +M + +S+C
Sbjct: 334 RPDRISMLSAISSC 347
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 187/432 (43%), Gaps = 45/432 (10%)
Query: 9 ALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
+Q+H I+K+G + + +N L F A G+L+ AR + N + +M+
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQN--SLVHFYA--ECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
Y+ A+ LF M+R P++ T V+ CA+L+ G++++ FI
Sbjct: 209 GYARRDFAKD---AVDLFFRMVRDEE---VTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
G + +++AL+ MY + VA+ LFD ++ ++ V EA+
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
+F M+++GV + +++S + +C+ + G+ HG V + E N+ ALIDM
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL-RNGFESWDNICNALIDM 381
Query: 249 YAK-------------------------------SGCIESAXXXXXXXXXXXXXXWTAMI 277
Y K +G +++A W +I
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 278 SGLASHGLCKEAIDLFLEMETC-NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
SGL L +EAI++F M++ V D TM ++ SAC + + A ++ ++K G
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-G 500
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
I+ ++ +VD+ +R G + A N++ + D W I A + + ERA L
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAERAIELF 559
Query: 397 KQHLEMGVDDSG 408
+E G+ G
Sbjct: 560 DDMIEQGLKPDG 571
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 37 AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHG 96
A +G+++ A + P N +NT++ S ++ +F + G
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS-----LFEEAIEVFCSMQSQEG 465
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
V A D T + C L K ++ +I K G D + L+ M+S GD A
Sbjct: 466 VNA-DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
+F+ + +RDV +WT+ I + AIELF M+E G++ + V L AC+
Sbjct: 525 MSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHG 584
Query: 217 GALSMGR-------KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
G + G+ K+HG+ E C ++D+ ++G +E A
Sbjct: 585 GLVQQGKEIFYSMLKLHGVSPEDVHYGC-------MVDLLGRAGLLEEA 626
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 223/632 (35%), Positives = 317/632 (50%), Gaps = 79/632 (12%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
+HAQIL+ G ++ R ++L + ++L S D Y+ + ++ N + N ++R
Sbjct: 47 HVHAQILRRGVLSS---RVAAQLVSCSSLLKSPD--YSLSIFRNSEERNPFVLNALIRGL 101
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ + ++ FI MLR GV PD TFPFVLK ++L G+ LH K
Sbjct: 102 T---ENARFESSVRHFILMLRL---GVK-PDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 131 MGFGSDCYIMNALIHMYSVFG-----------------------------------DLGV 155
D ++ +L+ MY+ G D+ +
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHM 214
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFG----------------------- 192
A LF MP+R+ SW++LI G VD A +LF
Sbjct: 215 ATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDY 274
Query: 193 --------RMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
MLE G++ N+ T+ +VL AC+ SGAL G ++HG + + I+ + TA
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNG-IKLDRAIGTA 333
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
L+DMYAK G ++ A WTAMI G A HG +AI F +M KPD
Sbjct: 334 LVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPD 393
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
E AVL+AC N+ V F M+ Y IEPT++H+ VVDLL RAG L EA + +
Sbjct: 394 EVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELV 453
Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
MP+ PD W L ACK H+ RAE + + LE+ + GSYI +AS G
Sbjct: 454 ENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQ 513
Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
+ + R + K+ + G S IE+DG L++F GDY+H I +KLDE++ ++G
Sbjct: 514 DVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKG 573
Query: 485 YNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMK 544
YNP + +I++EEK HSEKLAL G +RT+ G+ IRI+KNLR C DCH MK
Sbjct: 574 YNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMK 633
Query: 545 LISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+SKI QRDI++RD +FHHFK+G CSC DYW
Sbjct: 634 YVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 299/539 (55%), Gaps = 15/539 (2%)
Query: 42 SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVP-AP 100
+GDL AR + P +N M+ F+ L +F R HG+ +P
Sbjct: 38 AGDLVNARKVFDEMPDRKLTTWNAMIAGL-----IQFEFNEEGLSLF---REMHGLGFSP 89
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D +T V A L+ G+Q+HG+ K G D + ++L HMY G L +
Sbjct: 90 DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
MP R++V+W +LI G + P + L+ M +G N T V+VL +C+D
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209
Query: 221 MGRKVHGIVKEKKRI--ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
G+++H E +I V ++LI MY+K GC+ A W++MIS
Sbjct: 210 QGQQIHA---EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266
Query: 279 GLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
HG EAI+LF M E N++ +E +L AC ++ L + +F M ++YG
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
+P ++H+ CVVDLL RAGCL +AE + +MP+K D V+W+TL+ AC +H++ E A+R+ K
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFV 457
+ L++ +DS Y+L +NV+AS +W + +EVR+ M K + K G S E G +H+F
Sbjct: 387 EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFK 446
Query: 458 MGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYG 517
MGD + ++ I+ L E+ ++K +GY P + VL ++D+EEK + L+ HSEKLA+A+
Sbjct: 447 MGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFA 506
Query: 518 LIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
L+ +G+ IRI+KNLR C DCH K IS I R+I +RD RFHHF NG CSC DYW
Sbjct: 507 LMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 3/261 (1%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
N LI+ Y GDL AR++FD MPDR + +W ++I GL+ + E + LF M G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
++ T+ SV A ++S+G+++HG K +E V+++L MY ++G ++
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTI-KYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
W +I G A +G + + L+ M+ +P++ T VLS+C + +
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ + ++ K G + ++ + ++ GCL +A + D V+W ++I
Sbjct: 208 RGQGQQIHAEAIK-IGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMI 265
Query: 381 WACKVHEDTERAERLMKQHLE 401
A H + A L E
Sbjct: 266 SAYGFHGQGDEAIELFNTMAE 286
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
S LI+ Y ++G + +A W AMI+GL +E + LF EM
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
PDE T+ +V S V + K YG+E + + + R G L++ E
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK-YGLELDLVVNSSLAHMYMRNGKLQDGE 146
Query: 362 DFMNAMPMKPDAVLWRTLI 380
+ +MP++ + V W TLI
Sbjct: 147 IVIRSMPVR-NLVAWNTLI 164
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/534 (35%), Positives = 298/534 (55%), Gaps = 9/534 (1%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G L AR L N +N+M+ AY + +P A+ +F ML GV P +
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE---AMLIFQKML---DEGVK-PTD 337
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+ L CA L +G+ +H ++G + ++N+LI MY ++ A +F +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ R +VSW ++I G + RP++A+ F +M V+ + T VSV+ A A+
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
+ +HG+V + ++ V+TAL+DMYAK G I A W AMI G +
Sbjct: 458 KWIHGVVM-RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
HG K A++LF EM+ +KP+ T +V+SAC ++ LV F MK+ Y IE ++
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
H+G +VDLL RAG L EA DF+ MP+KP ++ ++ AC++H++ AE+ ++ E+
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
DD G ++L +N+Y + W +VR M ++GL K PG S +E+ +H F G
Sbjct: 637 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 696
Query: 463 HPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTS 522
HP++ I+ L++++ +K+ GY P + ++L ++++ K L HSEKLA+++GL+ T+
Sbjct: 697 HPDSKKIYAFLEKLICHIKEAGYVPD-TNLVLGVENDVKEQLLSTHSEKLAISFGLLNTT 755
Query: 523 QGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
G+ I + KNLR C DCH K IS + R+I+VRD RFHHFKNG CSC DYW
Sbjct: 756 AGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 174/370 (47%), Gaps = 10/370 (2%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
+N AR + P + +NT++ YS + + + M++ P
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTIVAGYSQNG-------MARMALEMVKSMCEENLKPSFI 237
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
T VL + L+L GK++HG+ + GF S I AL+ MY+ G L AR+LFD M
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
+R+VVSW S+ID V ++ P EA+ +F +ML+ GV+ D +V+ L ACAD G L GR
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
+H + E ++ +V +LI MY K +++A W AMI G A +
Sbjct: 358 FIHKLSVELG-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
G +A++ F +M + VKPD T +V++A + A + + R ++ +
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG-VVMRSCLDKNVFV 475
Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
+VD+ A+ G + A + M + W +I H + A L ++ +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSER-HVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534
Query: 404 VDDSGSYILA 413
+ +G L+
Sbjct: 535 IKPNGVTFLS 544
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 157/315 (49%), Gaps = 13/315 (4%)
Query: 15 QILKLGTSNNDAPRNF--SKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSL 72
QIL L N +F +KL + S D AR+ + LN Y+ TML+ ++
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVD-EAARVFEPIDSKLNVLYH-TMLKGFAK 112
Query: 73 SSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMG 132
SD AL F+ R + P + F ++LK C R GK++HG + K G
Sbjct: 113 VSDLDK---ALQFFV----RMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 133 FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFG 192
F D + M L +MY+ + AR++FDRMP+RD+VSW +++ G + A+E+
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 193 RMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKS 252
M E ++ + T+VSVL A + +S+G+++HG + + N+STAL+DMYAK
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM-RSGFDSLVNISTALVDMYAKC 284
Query: 253 GCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVL 312
G +E+A W +MI + KEA+ +F +M VKP + ++ L
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 313 SACRN-ADLVREAYM 326
AC + DL R ++
Sbjct: 345 HACADLGDLERGRFI 359
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 152/345 (44%), Gaps = 17/345 (4%)
Query: 72 LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFP--FVLKCCARLKLARQGKQLHGFIT 129
+ + P+ H H LS + +PA + + P +L+ C+ LK RQ + +
Sbjct: 14 IPNPPSRHRHFLS--------ERNYIPA-NVYEHPAALLLERCSSLKELRQ---ILPLVF 61
Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
K G + + L+ ++ +G + A +F+ + + V + +++ G +A++
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
F RM VE +L+ C D L +G+++HG++ K T L +MY
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV-KSGFSLDLFAMTGLENMY 180
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
AK + A W +++G + +G+ + A+++ M N+KP T+
Sbjct: 181 AKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 240
Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
+VL A L+ + R G + + +VD+ A+ G L+ A + M +
Sbjct: 241 SVLPAVSALRLISVGKEIHG-YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-L 298
Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS 414
+ + V W ++I A +E+ + A + ++ L+ GV + ++ +
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/527 (36%), Positives = 294/527 (55%), Gaps = 11/527 (2%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G L AR + P + + T++ YS P AL F MLR +P+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCD---ALLFFNQMLRFGY----SPNE 161
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
FT V+K A + G QLHGF K GF S+ ++ +AL+ +Y+ +G + A+ +FD
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ R+ VSW +LI G +A+ELF ML G + + S+ AC+ +G L G
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 223 RKVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
+ VH ++K +++ L+DMYAKSG I A W ++++ A
Sbjct: 282 KWVHAYMIKSGEKL--VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
HG KEA+ F EM ++P+E + +VL+AC ++ L+ E + + MKK GI P
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEA 398
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
H+ VVDLL RAG L A F+ MP++P A +W+ L+ AC++H++TE + E
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 458
Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDY 461
+ DD G +++ N+YAS G+W++ A VR+ M + G+ K P S +E++ A+H FV D
Sbjct: 459 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDE 518
Query: 462 NHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRT 521
HP+ + I K +E++ K+K+ GY P S V++ +D +E+ L +HSEK+ALA+ L+ T
Sbjct: 519 RHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT 578
Query: 522 SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNG 568
GS I I KN+R C DCH +KL SK+ R+IIVRD RFHHFK+
Sbjct: 579 PPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 7/345 (2%)
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
+PA F + +LK C KL QG+ +H I + F D + N L++MY+ G L A
Sbjct: 56 IPADRRF-YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEA 114
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
R++F++MP RD V+WT+LI G HDRP +A+ F +ML G N+ T+ SV++A A
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
G ++HG K + +V +AL+D+Y + G ++ A W A+
Sbjct: 175 RRGCCGHQLHGFCV-KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
I+G A ++A++LF M +P + ++ AC + + + V + M K
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK--S 291
Query: 337 IEPTIQHFG-CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
E + G ++D+ A++G + +A + + K D V W +L+ A H + A
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 396 MKQHLEMGV-DDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
++ +G+ + S++ + G ELM K G++
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 185/488 (37%), Positives = 262/488 (53%), Gaps = 11/488 (2%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGF-------ITKMGFGSDCYIMNALIHMYSVFGD 152
P+ T VL CA + GK++H + + K G G + ++N LI MY+
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 153 LGVARELFDRMP--DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV--NDATVVS 208
+ AR +FD + +RDVV+WT +I G H +A+EL M E + N T+
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX 268
L ACA AL +G+++H ++ VS LIDMYAK G I A
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
WT++++G HG +EA+ +F EM K D T+ VL AC ++ ++ + F
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED 388
+ MK +G+ P +H+ C+VDLL RAG L A + MPM+P V+W + C++H
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 389 TERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
E E ++ E+ + GSY L SN+YA+ G+W + +R LM KG+ K PG S +E
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Query: 449 VDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHH 508
F +GD HP A I+ L + + ++K GY P+ L ++DDEEK L H
Sbjct: 723 GIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEH 782
Query: 509 SEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNG 568
SEKLALAYG++ T QG+ IRI KNLR C DCH +S+I DII+RD RFHHFKNG
Sbjct: 783 SEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNG 842
Query: 569 DCSCKDYW 576
CSCK YW
Sbjct: 843 SCSCKGYW 850
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 199/445 (44%), Gaps = 64/445 (14%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS--YY 62
T+S+ +H ++L G + + + T+ ++ G L++A LL P ++ Y+
Sbjct: 40 TISQVKLIHQKLLSFGILTLNLTSHL--ISTYISV---GCLSHAVSLLRRFPPSDAGVYH 94
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVP-APDNFTFPFVLKCCARLKLARQG 121
+N+++R+Y D L LF M H + PDN+TFPFV K C + R G
Sbjct: 95 WNSLIRSYG---DNGCANKCLYLFGLM-----HSLSWTPDNYTFPFVFKACGEISSVRCG 146
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
+ H GF S+ ++ NAL+ MYS L AR++FD M DVVSW S+I+
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL 206
Query: 182 DRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
+P A+E+F RM E G ++ T+V+VL CA G S+G+++H + I+
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMF 265
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM------------------------ 276
V L+DMYAK G ++ A W AM
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 277 -----------ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY 325
ISG A GL EA+ + +M + +KP+E T+ +VLS C + +
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 326 MVFS-------DMKKR-YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM-PMKPDAVLW 376
+ D++K +G E + ++D+ A+ + A +++ P + D V W
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMV--INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTW 443
Query: 377 RTLIWACKVHEDTERAERLMKQHLE 401
+I H D +A L+ + E
Sbjct: 444 TVMIGGYSQHGDANKALELLSEMFE 468
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 157/360 (43%), Gaps = 50/360 (13%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY----------SV 149
PDN T VL CA L GKQLH F + ++ N L+ MY +V
Sbjct: 227 PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 150 FGDLGV---------------------ARELFDRMPDR----DVVSWTSLIDGLVDHDRP 184
F ++ V A LF++M + DVV+W++ I G
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN---- 240
EA+ + +ML +G++ N+ T++SVL CA GAL G+++H K I+ + N
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH-CYAIKYPIDLRKNGHGD 405
Query: 241 ---VSTALIDMYAKSGCIESAXXX--XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
V LIDMYAK +++A WT MI G + HG +A++L E
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 296 M--ETCNVKPDERTMTAVLSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLA 352
M E C +P+ T++ L AC + +R + + ++ + P C++D+ A
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYA 524
Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYIL 412
+ G + +A + M M + V W +L+ +H E A + + +G G +L
Sbjct: 525 KCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 190/496 (38%), Positives = 282/496 (56%), Gaps = 6/496 (1%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
A+ LFI R P+ FT +L CA K + G+QLHG + K+GF D Y+ N
Sbjct: 332 AVDLFI----RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN 387
Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
ALI +Y+ + A +LF + ++ VSW ++I G + +A +F L V V
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV 447
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
+ T S L ACA ++ +G +VHG+ + + K VS +LIDMYAK G I+ A
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSV 506
Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
W A+ISG ++HGL ++A+ + M+ + KP+ T VLS C NA L+
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLI 566
Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
+ F M + +GIEP ++H+ C+V LL R+G L +A + +P +P ++WR ++
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
A + E A R ++ L++ D +Y+L SN+YA +W+N A +R+ M + G+ K
Sbjct: 627 ASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKE 686
Query: 442 PGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEK 501
PG S IE G +H F +G +HP+ I L+ + K + GY P + VLL++DDEEK
Sbjct: 687 PGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEK 746
Query: 502 ATQLLHHSEKLALAYGLIRT-SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRI 560
+L HSE+LALAYGL+R S ++I I+KNLR C DCH MK+IS I QRD+++RD
Sbjct: 747 DKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMN 806
Query: 561 RFHHFKNGDCSCKDYW 576
RFHHF G CSC D+W
Sbjct: 807 RFHHFHAGVCSCGDHW 822
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 168/393 (42%), Gaps = 30/393 (7%)
Query: 12 LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY- 70
LH+ I+KLG +N F A S G ++ AR + + + ++ Y
Sbjct: 168 LHSPIVKLGYDSN----AFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 71 --SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
D + + FM P+N+TF LK L K +HG I
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFM----------PNNYTFDTALKASIGLGAFDFAKGVHGQI 273
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
K + D + L+ +Y+ GD+ A ++F+ MP DVV W+ +I + EA+
Sbjct: 274 LKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAV 333
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
+LF RM EA V N+ T+ S+L CA +G ++HG+V K + VS ALID+
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV-KVGFDLDIYVSNALIDV 392
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
YAK +++A W +I G + G +A +F E V E T
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTF 452
Query: 309 TAVLSAC---RNADLVREAY--MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
++ L AC + DL + + + ++ K+ + ++ +D+ A+ G +K A+
Sbjct: 453 SSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSL------IDMYAKCGDIKFAQSV 506
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
N M D W LI H +A R++
Sbjct: 507 FNEME-TIDVASWNALISGYSTHGLGRQALRIL 538
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 18/308 (5%)
Query: 9 ALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
A +H ILK G+ + F+ A +G A L P N+ + T+ +
Sbjct: 68 AKAIHCDILKKGSCLD----LFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQ 123
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
Y+ DP + L R H + + F LK L A LH I
Sbjct: 124 GYA-CQDPIGLYSRL-------HREGHEL---NPHVFTSFLKLFVSLDKAEICPWLHSPI 172
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
K+G+ S+ ++ ALI+ YSV G + AR +F+ + +D+V W ++ V++ +++
Sbjct: 173 VKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSL 232
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCNVSTALID 247
+L M AG N+ T + L+A GA + VHG I+K ++ + V L+
Sbjct: 233 KLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR--VGVGLLQ 290
Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
+Y + G + A W+ MI+ +G C EA+DLF+ M V P+E T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 308 MTAVLSAC 315
++++L+ C
Sbjct: 351 LSSILNGC 358
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 114/285 (40%), Gaps = 9/285 (3%)
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
+P D+ + +L+ C + K +H I K G D + N L++ Y G A
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDA 103
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
LFD MP+R+ VS+ +L G D I L+ R+ G E+N S L+
Sbjct: 104 LNLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSL 159
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
+ +H + K + V ALI+ Y+ G ++SA W +
Sbjct: 160 DKAEICPWLHSPIV-KLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD-MKKRY 335
+S +G ++++ L M P+ T L A A V +K Y
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
++P + G ++ L + G + +A N MP K D V W +I
Sbjct: 279 VLDPRVG-VG-LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMI 320
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/438 (40%), Positives = 273/438 (62%), Gaps = 3/438 (0%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
NA+I G++ AR +FD M +R+ SW ++I + +EA++LF M + GV
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
T++S+L CA +L G++VH + + + + V++ L+ MY K G + +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLV-RCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKPDERTMTAVLSACRNAD 319
W ++ISG ASHGL +EA+ +F EM + + KP+E T A LSAC A
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
+V E ++ M+ +G++P H+ C+VD+L RAG EA + +++M ++PDA +W +L
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
+ AC+ H + AE K+ +E+ ++SG+YIL SN+YAS G+W++ AE+R+LM + +
Sbjct: 508 LGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVR 567
Query: 440 KPPGSSRIEVDGALHEFVMGDYN-HPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDD 498
K PG S EV+ +H F G N HPE ++I LDE+ L++ GYNP S L ++D+
Sbjct: 568 KSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDE 627
Query: 499 EEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRD 558
EEK L +HSE+LA+AY L++ S+G IR++KNLR C DCH +K+ISK+ +R+II+RD
Sbjct: 628 EEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRD 687
Query: 559 RIRFHHFKNGDCSCKDYW 576
RFHHF+NG+CSCKDYW
Sbjct: 688 ANRFHHFRNGECSCKDYW 705
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 36 FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
+ L G++ AR + S N + T+++ + + AL LFI M ++
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNG---FELEALDLFILMQKQGVR 328
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
P T +L CA L GKQ+H + + F D Y+ + L+ MY G+L
Sbjct: 329 ----PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACA 214
++ +FDR P +D++ W S+I G H EA+++F M L + N+ T V+ L AC+
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG 253
+G + G K++ ++ ++ ++DM ++G
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 26/249 (10%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
N L+ Y G++ AR++FD MP+R+VVSWT+L+ G V + + A LF +M E
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK--- 139
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
N + +L G + K++ ++ +K I T++I K G ++ A
Sbjct: 140 -NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNI-----ARTSMIHGLCKEGRVDEARE 193
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD--ERTMTAVLSACRNA 318
WT M++G + +A +F +V P+ E + T++L
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGYVQN 247
Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
+ +A +F M ++P I ++ L + G + +A ++M + DA W+T
Sbjct: 248 GRIEDAEELFEVMP----VKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERNDAS-WQT 301
Query: 379 LIWACKVHE 387
+I K+HE
Sbjct: 302 VI---KIHE 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
AR+LFD MPDR+++SW L+ G + + EA ++F M E V + ++++
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVH 122
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
+G + + + + EK ++ T ++ + + G I+ A T+
Sbjct: 123 NGKVDVAESLFWKMPEKNKVSW-----TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS 177
Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
MI GL G EA ++F EM +V T T +++ + V +A +F M ++
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKIFDVMPEKT 233
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
+ T G V + G +++AE+ MP+KP
Sbjct: 234 EVSWTSMLMGYV-----QNGRIEDAEELFEVMPVKP 264
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/476 (38%), Positives = 263/476 (55%), Gaps = 1/476 (0%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D + F VL C L +GKQ+H I + F Y+ +ALI MY L A+ +F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
DRM ++VVSWT+++ G R EA+++F M +G++ + T+ + ACA+ +L
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
G + HG I VS +L+ +Y K G I+ + WTAM+S
Sbjct: 389 EGSQFHGKAITSGLIH-YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
A G E I LF +M +KPD T+T V+SAC A LV + F M YGI P+
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 507
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
I H+ C++DL +R+G L+EA F+N MP PDA+ W TL+ AC+ + E + + +
Sbjct: 508 IGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI 567
Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
E+ Y L S++YAS GKW + A++R M +K + K PG S I+ G LH F D
Sbjct: 568 ELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADD 627
Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIR 520
+ P D I+ KL+E+ +K+ GY P S V ++++ K L +HSE+LA+A+GLI
Sbjct: 628 ESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIF 687
Query: 521 TSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
G IR+ KNLR C DCH K IS + R+I+VRD +RFH FK+G CSC D+W
Sbjct: 688 VPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 172/412 (41%), Gaps = 39/412 (9%)
Query: 27 PRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF 86
P FS A S +G ++ P + +N ++ YSLS A+ +
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGA---AVKAY 126
Query: 87 IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
M+R + + T +LK + GKQ+HG + K+GF S + + L++M
Sbjct: 127 NTMMRDFSANLT---RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183
Query: 147 YSVFGDLGVARELFDRMPDR------------------------------DVVSWTSLID 176
Y+ G + A+++F + DR D VSW ++I
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIK 243
Query: 177 GLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIE 236
GL + EAIE F M G++++ SVL AC GA++ G+++H + + +
Sbjct: 244 GLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII-RTNFQ 302
Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
V +ALIDMY K C+ A WTAM+ G G +EA+ +FL+M
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
+ + PD T+ +SAC N + E F G+ + +V L + G
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG 408
+ ++ N M ++ DAV W ++ A +L + ++ G+ G
Sbjct: 422 IDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG 472
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 41/273 (15%)
Query: 45 LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
L+YA+ + N + M+ Y + A+ +F+ M R PD++T
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE---AVKIFLDMQRSGID----PDHYT 373
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
+ CA + +G Q HG G + N+L+ +Y GD+ + LF+ M
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
RD VSWT+++ R VE I+LF +M++ G++ + T+ V+ AC+ +G + G++
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
++ + I + +ID++++SG +E A I+G+
Sbjct: 494 YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR---------------FINGMP--- 535
Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
PD T +LSACRN
Sbjct: 536 ----------------FPPDAIGWTTLLSACRN 552
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 151/384 (39%), Gaps = 86/384 (22%)
Query: 56 PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
P ++ YN ++ AY+L T+ RR +P P+ F++
Sbjct: 37 PYPETFLYNNIVHAYALMKSSTY-----------ARRVFDRIPQPNLFSW---------- 75
Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI 175
N L+ YS G + F+++PDRD V+W LI
Sbjct: 76 -------------------------NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLI 110
Query: 176 DGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
+G A++ + M+ + + T++++L+ + +G +S+G+++HG V K
Sbjct: 111 EGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI-KLG 169
Query: 235 IECKCNVSTALIDMYAKSGCIESA------------------------------XXXXXX 264
E V + L+ MYA GCI A
Sbjct: 170 FESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR 229
Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREA 324
W AMI GLA +GL KEAI+ F EM+ +K D+ +VL AC + E
Sbjct: 230 GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Query: 325 YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACK 384
+ + + R + I ++D+ + CL A+ + M K + V W ++
Sbjct: 290 KQIHACI-IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVG-- 345
Query: 385 VHEDTERAERLMKQHLEM---GVD 405
+ T RAE +K L+M G+D
Sbjct: 346 -YGQTGRAEEAVKIFLDMQRSGID 368
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 303/572 (52%), Gaps = 23/572 (4%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
QLHA + G S + + N ++ F S + R+L P L+ YN ++ +Y
Sbjct: 271 QLHALSVTTGFSRDASVGN--QILDF--YSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 71 SLSSD---PTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
S + H F + F R NF F +L A L + G+QLH
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRR----------NFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
S ++ N+L+ MY+ A +F +P R VSWT+LI G V
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV--STAL 245
++LF +M + + + +T +VL+A A +L +G+++H + +E NV + L
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE---NVFSGSGL 493
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
+DMYAK G I+ A W A+IS A +G + AI F +M ++PD
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
++ VL+AC + V + F M YGI P +H+ C++DLL R G EAE M+
Sbjct: 554 VSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613
Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM-GVDDSGSYILASNVYASVGKWS 424
MP +PD ++W +++ AC++H++ AER ++ M + D+ +Y+ SN+YA+ G+W
Sbjct: 614 EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWE 673
Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
+V++ M ++G+ K P S +EV+ +H F D HP D I K++E+ ++++EG
Sbjct: 674 KVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREG 733
Query: 485 YNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMK 544
Y P S V+ ++D++ K L +HSE+LA+A+ LI T +G I ++KNLR+C DCH +K
Sbjct: 734 YKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIK 793
Query: 545 LISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
LISKI +R+I VRD RFHHF G CSC DYW
Sbjct: 794 LISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 172/405 (42%), Gaps = 16/405 (3%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+HA +KLG N P + L+ A +L P +S +NT++ Y
Sbjct: 168 QVHAFAVKLGFDTN--PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
T H LF+ M R+ H P +FTF VLK L G+QLH
Sbjct: 226 EKDGLYTESIH---LFLKM-RQSGH---QPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
GF D + N ++ YS + R LFD MP+ D VS+ +I D+ ++
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH--GIVKEKKRIECKCNVSTALIDM 248
F M G + + ++L A+ +L MGR++H ++ I +V +L+DM
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI---LHVGNSLVDM 395
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
YAK E A WTA+ISG GL + LF +M N++ D+ T
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
VL A + + + + + + +E G +VD+ A+ G +K+A MP
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP 514
Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
+ +AV W LI A + D E A + +E G+ IL
Sbjct: 515 DR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-- 198
N +I + GD+ AR+LFD MPDR VV+WT L+ + EA +LF +M +
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGI-VKEKKRIECKCNVSTALIDMYAKSGCIES 257
+ T ++L C D+ + +VH VK VS L+ Y + ++
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
A + +I+G GL E+I LFL+M +P + T + VL A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 345 bits (886), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 211/608 (34%), Positives = 323/608 (53%), Gaps = 53/608 (8%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNP--ALNSYYYNTMLR 68
+LHA + G APR++ F + SG++ A+ L P ++ + T+L
Sbjct: 27 ELHAVLTTSGLKK--APRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
++S + ++ LF+ M R+ D+ + + CA+L+ +Q HG
Sbjct: 85 SFSRYGLLVN---SMKLFVEMRRKRVE----IDDVSVVCLFGVCAKLEDLGFAQQGHGVA 137
Query: 129 TKMGFGSDCYIMNALIHMYSVFG-------------------------------DLGVAR 157
KMG + + NAL+ MY G L R
Sbjct: 138 VKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGR 197
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADS 216
E+F MP+R+ V+WT ++ G + E +EL M+ G +N T+ S+L ACA S
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257
Query: 217 GALSMGRKVHGIVKEKKRIECK------CNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
G L +GR VH +K+ + + V TAL+DMYAK G I+S+
Sbjct: 258 GNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNV 317
Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
W A+ SGLA HG + ID+F +M VKPD+ T TAVLSAC ++ +V E + F
Sbjct: 318 VTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHS 376
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
++ YG+EP + H+ C+VDLL RAG ++EAE M MP+ P+ V+ +L+ +C VH E
Sbjct: 377 LR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVE 435
Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
AER+ ++ ++M ++ IL SN+Y + G+ +R + K+G+ K PG S I V+
Sbjct: 436 IAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVN 495
Query: 451 GALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVL--LEIDDEEKATQLLHH 508
++H F GD +HP I++KL+E++++++ GY P +S ++ E D EEK L H
Sbjct: 496 DSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCH 555
Query: 509 SEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNG 568
SEKLA+ +GL+ T + + + KNLR C DCH MK++SK+Y R+II+RDR RFH FK G
Sbjct: 556 SEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGG 615
Query: 569 DCSCKDYW 576
CSC DYW
Sbjct: 616 SCSCSDYW 623
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 44/322 (13%)
Query: 107 FVLKCCARLKLARQGKQLHGFITKMGF--GSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
+L+ CA R GK+LH +T G Y+ NAL Y+ G++ A++LFD +P
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 165 --DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
++D V WT+L+ + V +++LF M VE++D +VV + CA L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI--------------------------- 255
++ HG V K + V AL+DMY K G +
Sbjct: 131 QQGHG-VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 256 ----ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKPDERTMTA 310
E WT M++G G +E ++L EM C + T+ +
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 311 VLSAC-RNADLVREAYMVFSDMKKR--YGIEPT---IQHFGCVVDLLARAGCLKEAEDFM 364
+LSAC ++ +LV ++ +KK G E + + +VD+ A+ G + + +
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 365 NAMPMKPDAVLWRTLIWACKVH 386
M K + V W L +H
Sbjct: 310 RLMR-KRNVVTWNALFSGLAMH 330
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 252/425 (59%), Gaps = 6/425 (1%)
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
+++F +M + +VSW +I + + PVEA+EL+ RM G E + ++ SVL AC D+
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
ALS+G+K+HG ++ KK I + ALIDMYAK GC+E A WTAM
Sbjct: 323 SALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
IS G +A+ LF +++ + PD L+AC +A L+ E F M Y
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 441
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
I P ++H C+VDLL RAG +KEA F+ M M+P+ +W L+ AC+VH DT+
Sbjct: 442 ITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAA 501
Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
+ ++ + SG Y+L SN+YA G+W +R +M KGL K PG+S +EV+ +H F
Sbjct: 502 DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 561
Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAY 516
++GD +HP++D I+ +LD +V K+K+ GY P L ++++E+K T L HSEKLA+ +
Sbjct: 562 LVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVF 621
Query: 517 GLIRTSQ-----GSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCS 571
L+ T + + IRI KNLR C DCH KLIS+I R+II+RD RFH F+ G CS
Sbjct: 622 ALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCS 681
Query: 572 CKDYW 576
C DYW
Sbjct: 682 CGDYW 686
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 149/339 (43%), Gaps = 43/339 (12%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
D+ AR + P N N M+R+Y + F+ + +F + PD++
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYV-----NNGFYGEGVKVFGTMCGCN--VRPDHY 141
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
TFP VLK C+ G+++HG TK+G S ++ N L+ MY G L AR + D M
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
RDVVSW SL+ G + R +A+E+ M + + T+ S+L A +++ ++
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV-- 259
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
+ DM+ K G W MI +
Sbjct: 260 -------------------MYVKDMFFKMG-------------KKSLVSWNVMIGVYMKN 287
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
+ EA++L+ ME +PD ++T+VL AC + + + ++++ I P +
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI-PNLLL 346
Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
++D+ A+ GCL++A D M + D V W +I A
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 26/310 (8%)
Query: 143 LIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
L+ Y+ D+ AR++FD +P+R+V+ +I V++ E +++FG M V +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX 262
T VL+AC+ SG + +GRK+HG K + V L+ MY K G + A
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSAT-KVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 263 XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR 322
W +++ G A + +A+++ EME+ + D TM ++L A N
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TT 256
Query: 323 EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF---MNAMPMKPDAVLWRTL 379
E M DM + G + ++ + ++ + + EA + M A +PDAV ++
Sbjct: 257 ENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 380 IWAC----------KVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEV 429
+ AC K+H ER + + LE + D +YA G +V
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID---------MYAKCGCLEKARDV 366
Query: 430 RELMNKKGLI 439
E M + ++
Sbjct: 367 FENMKSRDVV 376
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 40/273 (14%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD + VL C GK++HG+I + + + NALI MY+ G L AR++
Sbjct: 307 PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDV 366
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F+ M RDVVSWT++I R +A+ LF ++ ++G+ + V+ L AC+ +G L
Sbjct: 367 FENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLL 426
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
GR ++ + +I + ++D+ ++G +
Sbjct: 427 EEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV------------------------ 462
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR-NADLVREAYMVFSDMKKRYGIE 338
KEA +M +++P+ER A+L ACR ++D + ++ +D K + +
Sbjct: 463 -------KEAYRFIQDM---SMEPNERVWGALLGACRVHSD--TDIGLLAAD--KLFQLA 508
Query: 339 PTIQ-HFGCVVDLLARAGCLKEAEDFMNAMPMK 370
P ++ + ++ A+AG +E + N M K
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 541
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/478 (36%), Positives = 278/478 (58%), Gaps = 2/478 (0%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+ TF ++ C +G+ +HG + K G + ++NA I+ Y GDL + +L
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F+ + +++VSW ++I + + + + F G E + AT ++VLR+C D G +
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
+ + +HG++ KC ++TAL+D+Y+K G +E + WTAM++
Sbjct: 252 RLAQGIHGLIMFGGFSGNKC-ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAA 310
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
A+HG ++AI F M + PD T T +L+AC ++ LV E F M KRY I+P
Sbjct: 311 YATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDP 370
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
+ H+ C+VDLL R+G L++A + MPM+P + +W L+ AC+V++DT+ + ++
Sbjct: 371 RLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERL 430
Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
E+ D +Y++ SN+Y++ G W + + +R LM +KGL++ G S IE +H+FV+G
Sbjct: 431 FELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVG 490
Query: 460 DYNHPEADNIFVKLDEMVDKLKKE-GYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGL 518
D++HPE++ I KL E+ K+K E GY K VL ++ ++ K + HSEK+A+A+GL
Sbjct: 491 DWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGL 550
Query: 519 IRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+ S I I KNLR C DCHE K IS I +R II+RD RFHHF +G CSC DYW
Sbjct: 551 LVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 148/345 (42%), Gaps = 27/345 (7%)
Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV 168
+K C ++L R LH + K +I + L+ Y G A +LFD MP+RD+
Sbjct: 41 VKSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDL 97
Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRML--EAGVEVNDATVVSVLRACADSGALSMGRKVH 226
VSW SLI G + E+ RM+ E G N+ T +S++ AC G+ GR +H
Sbjct: 98 VSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIH 157
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC 286
G+V + +E + V A I+ Y K+G + S+ W MI +GL
Sbjct: 158 GLVMKFGVLE-EVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLA 216
Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG- 345
++ + F +PD+ T AVL +C + +VR A GI I G
Sbjct: 217 EKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA----------QGIHGLIMFGGF 266
Query: 346 ----CV----VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
C+ +DL ++ G L+++ + + PD++ W ++ A H A + +
Sbjct: 267 SGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 398 QHLEMGVD-DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
+ G+ D ++ N + G E M+K+ I P
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDP 370
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/559 (33%), Positives = 301/559 (53%), Gaps = 43/559 (7%)
Query: 53 TSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCC 112
+S N +N +L ++ S +H A + M ++ H PD T VL
Sbjct: 210 SSGIEANIVSWNGILSGFNRSG---YHKEA----VVMFQKIHHLGFCPDQVTVSSVLPSV 262
Query: 113 ARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS----VFGDL--------------- 153
++ G+ +HG++ K G D +++A+I MY V+G +
Sbjct: 263 GDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCN 322
Query: 154 ----GVAR--------ELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
G++R E+F+ ++ +VVSWTS+I G + + +EA+ELF M A
Sbjct: 323 AYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA 382
Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
GV+ N T+ S+L AC + AL GR HG ++ +V +ALIDMYAK G I
Sbjct: 383 GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINL 441
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
+ W ++++G + HG KE + +F + +KPD + T++LSAC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
L E + F M + YGI+P ++H+ C+V+LL RAG L+EA D + MP +PD+ +W
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWG 561
Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
L+ +C++ + + AE ++ + ++ G+Y+L SN+YA+ G W+ +R M G
Sbjct: 562 ALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 438 LIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEID 497
L K PG S I+V ++ + GD +HP+ D I K+DE+ +++K G+ P L L +++
Sbjct: 622 LKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVE 681
Query: 498 DEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVR 557
++E+ L HSEKLA+ +GL+ T G+ ++++KNLR C DCH +K IS R+I +R
Sbjct: 682 EQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIR 741
Query: 558 DRIRFHHFKNGDCSCKDYW 576
D RFHHFK+G CSC D+W
Sbjct: 742 DTNRFHHFKDGICSCGDFW 760
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 207/505 (40%), Gaps = 91/505 (18%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q HA+ILK G N+ + A+ S N A L+L S P Y +++++ A
Sbjct: 36 QAHARILKSGAQND----GYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ + T S R +HG+ PD+ P + K CA L + GKQ+H
Sbjct: 92 TKAKLFTQSIGVFS------RMFSHGL-IPDSHVLPNLFKVCAELSAFKVGKQIHCVSCV 144
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVV--------------------- 169
G D ++ ++ HMY G +G AR++FDRM D+DVV
Sbjct: 145 SGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRI 204
Query: 170 --------------SWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
SW ++ G EA+ +F ++ G + TV SVL + D
Sbjct: 205 LSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD 264
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG---------------------- 253
S L+MGR +HG V ++ ++ KC +S A+IDMY KSG
Sbjct: 265 SEMLNMGRLIHGYVIKQGLLKDKCVIS-AMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 254 -------------CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
+E WT++I+G A +G EA++LF EM+
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
VKP+ T+ ++L AC N + R + + ++D+ A+ G + +
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHG-FAVRVHLLDNVHVGSALIDMYAKCGRINLS 442
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERA----ERLMKQHLEMGVDDSGSYILASNV 416
+ N MP K + V W +L+ +H + E LM+ L+ D S+ +
Sbjct: 443 QIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK---PDFISFTSLLSA 498
Query: 417 YASVGKWSNKAEVRELMNKKGLIKP 441
VG + ++M+++ IKP
Sbjct: 499 CGQVGLTDEGWKYFKMMSEEYGIKP 523
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 342 bits (876), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 183/484 (37%), Positives = 279/484 (57%), Gaps = 9/484 (1%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF--GSDCYIMNALIHMYSVFGDLGVAR 157
PD FT +LK C+ + GKQ+HGF+ + GF S I +L+ +Y G L AR
Sbjct: 208 PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSAR 267
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
+ FD++ ++ ++SW+SLI G VEA+ LF R+ E +++ + S++ AD
Sbjct: 268 KAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFA 327
Query: 218 ALSMGRKVHGI-VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
L G+++ + VK +E +V +++DMY K G ++ A WT +
Sbjct: 328 LLRQGKQMQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
I+G HGL K+++ +F EM N++PDE AVLSAC ++ +++E +FS + + +G
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG 445
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
I+P ++H+ CVVDLL RAG LKEA+ ++ MP+KP+ +W+TL+ C+VH D E + +
Sbjct: 446 IKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVG 505
Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
K L + + +Y++ SN+Y G W+ + REL N KGL K G S +E++ +H F
Sbjct: 506 KILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFF 565
Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKE-GYNPKLSEVLLEIDDEEKATQLLHHSEKLALA 515
G+ +HP I L E +L++E GY L L +IDDE K L HSEKLA+
Sbjct: 566 RSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIG 625
Query: 516 YGLIR---TSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSC 572
L +G IR+ KNLR C DCHEF+K +SKI + +VRD +RFH F++G CSC
Sbjct: 626 LALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSC 685
Query: 573 KDYW 576
DYW
Sbjct: 686 GDYW 689
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 192/399 (48%), Gaps = 18/399 (4%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+H +LK G+ N N+ P A + S P N ++ ++ +
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPL----MAYKVFDSMPERNVVSWSALMSGH 82
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
L+ D +LSLF M R+ + P+ FTF LK C L +G Q+HGF K
Sbjct: 83 VLNGDLKG---SLSLFSEMGRQGIY----PNEFTFSTNLKACGLLNALEKGLQIHGFCLK 135
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
+GF + N+L+ MYS G + A ++F R+ DR ++SW ++I G V +A++
Sbjct: 136 IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDT 195
Query: 191 FGRMLEAGVE--VNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCNVSTALID 247
FG M EA ++ ++ T+ S+L+AC+ +G + G+++HG +V+ ++ +L+D
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 255
Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
+Y K G + SA W+++I G A G EA+ LF ++ N + D
Sbjct: 256 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315
Query: 308 MTAVLSACRNADLVREA-YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
+++++ + L+R+ M +K G+E ++ VVD+ + G + EAE
Sbjct: 316 LSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAE 373
Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
M +K D + W +I H +++ R+ + L ++
Sbjct: 374 MQLK-DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 5/276 (1%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L+ C R L+ QG Q+H ++ K G G + N LI MY + +A ++FD MP+R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
VVSW++L+ G V + ++ LF M G+ N+ T + L+AC AL G ++HG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
K E V +L+DMY+K G I A W AMI+G G
Sbjct: 132 FCL-KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 288 EAIDLFLEMETCNVK--PDERTMTAVLSACRNADLVREAYMVFSDM-KKRYGIEPTIQHF 344
+A+D F M+ N+K PDE T+T++L AC + ++ + + + + +
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 345 GCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
G +VDL + G L A + + K + W +LI
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKT-MISWSSLI 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Query: 205 TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
+VS+LR C G G +VH + K S LIDMY K A
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLL-KSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREA 324
W+A++SG +G K ++ LF EM + P+E T + L AC + + +
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 325 YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ K G E ++ +VD+ ++ G + EAE + + + W +I
Sbjct: 127 LQIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMI 180
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 341 bits (875), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 196/567 (34%), Positives = 299/567 (52%), Gaps = 15/567 (2%)
Query: 12 LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY--YNTMLRA 69
+HAQ+ +LG + F + A + L AR + P + ++ A
Sbjct: 141 VHAQVFRLGFDAD----VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 70 YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
Y+ + +P AL +F M + PD VL L+ +QG+ +H +
Sbjct: 197 YAQNGEP---MEALEIFSQMRKMDV----KPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
KMG + ++ +L MY+ G + A+ LFD+M +++ W ++I G + EAI+
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
+F M+ V + ++ S + ACA G+L R ++ V + +S+ALIDM+
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD-DVFISSALIDMF 368
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
AK G +E A W+AMI G HG +EAI L+ ME V P++ T
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
+L AC ++ +VRE + F+ M + I P QH+ CV+DLL RAG L +A + + MP+
Sbjct: 429 GLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEV 429
+P +W L+ ACK H E E +Q + ++G Y+ SN+YA+ W AEV
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 430 RELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKL 489
R M +KGL K G S +EV G L F +GD +HP + I +++ + +LK+ G+
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 607
Query: 490 SEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKI 549
L +++DEE L HSE++A+AYGLI T QG+ +RI KNLR+C +CH KLISK+
Sbjct: 608 DASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKL 667
Query: 550 YQRDIIVRDRIRFHHFKNGDCSCKDYW 576
R+I+VRD RFHHFK+G CSC DYW
Sbjct: 668 VDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 204/410 (49%), Gaps = 30/410 (7%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
T ++ Q+HA++L LG + F A S GD+ +AR + P + +
Sbjct: 32 THKAQLKQIHARLLVLGLQFS----GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPW 87
Query: 64 NTMLRAYSLSSDPTHHFH-ALSLFIFM-LRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
N ++R YS ++ HF AL ++ M L R + PD+FTFP +LK C+ L + G
Sbjct: 88 NAIIRGYSRNN----HFQDALLMYSNMQLARVS-----PDSFTFPHLLKACSGLSHLQMG 138
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD--RMPDRDVVSWTSLIDGLV 179
+ +H + ++GF +D ++ N LI +Y+ LG AR +F+ +P+R +VSWT+++
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
+ P+EA+E+F +M + V+ + +VSVL A L GR +H V K +E +
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV-KMGLEIEP 257
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
++ +L MYAK G + +A W AMISG A +G +EAID+F EM
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 300 NVKPDERTMTAVLSACRNADLVREA-----YMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
+V+PD ++T+ +SAC + +A Y+ SD + I + +D+ A+
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL------IDMFAKC 371
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
G ++ A + + D V+W +I +H A L + GV
Sbjct: 372 GSVEGARLVFD-RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 291/534 (54%), Gaps = 7/534 (1%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G+++ +R +L P + +N ++ Y+ DP AL+ F M GV +
Sbjct: 411 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK---ALAAFQTM---RVEGVSSNYI 464
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+ C L +GK LH +I GF SD ++ N+LI MY+ GDL +++LF+
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 524
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ +R++++W +++ H E ++L +M GV ++ + L A A L G
Sbjct: 525 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG 584
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
+++HG+ K E + A DMY+K G I W +IS L
Sbjct: 585 QQLHGLAV-KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 643
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
HG +E F EM +KP T ++L+AC + LV + + + + +G+EP I+
Sbjct: 644 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIE 703
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
H CV+DLL R+G L EAE F++ MPMKP+ ++WR+L+ +CK+H + +R + + ++
Sbjct: 704 HCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKL 763
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
+D Y+L+SN++A+ G+W + VR+ M K + K S +++ + F +GD
Sbjct: 764 EPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 823
Query: 463 HPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTS 522
HP+ I+ KL+++ +K+ GY S+ L + D+E+K L +HSE+LALAY L+ T
Sbjct: 824 HPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTP 883
Query: 523 QGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+GS +RI KNLR C DCH K +S++ R I++RD+ RFHHF+ G CSCKDYW
Sbjct: 884 EGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 11/339 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G + AR L P N +NTM+ + + F R+ P +
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIV---RVGLYLEGMEFF----RKMCDLGIKPSS 58
Query: 103 FTFPFVLKCCARL-KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
F ++ C R + R+G Q+HGF+ K G SD Y+ A++H+Y V+G + +R++F+
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
MPDR+VVSWTSL+ G D P E I+++ M GV N+ ++ V+ +C S+
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
GR++ G V K +E K V +LI M G ++ A W ++ + A
Sbjct: 179 GRQIIGQVV-KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
+G +E+ +F M + + + T++ +LS + D + + + + G + +
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG-LVVKMGFDSVV 296
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
++ + A AG EA MP K D + W +L+
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM 334
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 171/400 (42%), Gaps = 25/400 (6%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+ Q++K G + A N + L G+++YA + ++ +N++ AY
Sbjct: 181 QIIGQVVKSGLESKLAVENS----LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ + F IF L R H ++ T +L + + G+ +HG + K
Sbjct: 237 AQNGHIEESFR-----IFSLMRRFH--DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 289
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
MGF S + N L+ MY+ G A +F +MP +D++SW SL+ V+ R ++A+ L
Sbjct: 290 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 349
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
M+ +G VN T S L AC GR +HG+V + + AL+ MY
Sbjct: 350 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI-IGNALVSMYG 408
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
K G + + W A+I G A +A+ F M V + T+ +
Sbjct: 409 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 468
Query: 311 VLSAC-RNADLVRE-----AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
VLSAC DL+ AY+V + G E ++ + A+ G L ++D
Sbjct: 469 VLSACLLPGDLLERGKPLHAYIVSA------GFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
N + + + + W ++ A H E +L+ + GV
Sbjct: 523 NGLDNR-NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 561
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 14/257 (5%)
Query: 146 MYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDAT 205
MY+ FG + AR LFD MP R+ VSW +++ G+V +E +E F +M + G++ +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 206 VVSVLRACADSGAL-SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
+ S++ AC SG++ G +VHG V K + VSTA++ +Y G + +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVA-KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC---RNADLV 321
WT+++ G + G +E ID++ M V +E +M+ V+S+C ++ L
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 322 RE--AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
R+ +V S ++ + +E ++ + +L G + A + M + D + W ++
Sbjct: 180 RQIIGQVVKSGLESKLAVENSL------ISMLGSMGNVDYANYIFDQMSER-DTISWNSI 232
Query: 380 IWACKVHEDTERAERLM 396
A + E + R+
Sbjct: 233 AAAYAQNGHIEESFRIF 249
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 197/572 (34%), Positives = 313/572 (54%), Gaps = 13/572 (2%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
+S A ++ +LK G RN + GD+ AR + S ++ +N+
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNI----LIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 66 MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
++ Y S D A+ LF M+ D+ T+ ++ RL + GK LH
Sbjct: 379 IISGYIQSGD---LMEAMKLFKMMMIMEEQA----DHITYLMLISVSTRLADLKFGKGLH 431
Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
K G D + NALI MY+ G++G + ++F M D V+W ++I V
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
+++ +M ++ V + AT + L CA A +G+++H + + E + + AL
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNAL 550
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
I+MY+K GC+E++ WT MI +G ++A++ F +ME + PD
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
A++ AC ++ LV E F MK Y I+P I+H+ CVVDLL+R+ + +AE+F+
Sbjct: 611 VVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670
Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
AMP+KPDA +W +++ AC+ D E AER+ ++ +E+ DD G ILASN YA++ KW
Sbjct: 671 AMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 730
Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
+ +R+ + K + K PG S IEV +H F GD + P+++ I+ L+ + + KEGY
Sbjct: 731 VSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790
Query: 486 NPKLSEVLLEIDDEEKATQLL-HHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMK 544
P EV +++EE+ +L+ HSE+LA+A+GL+ T G+ ++++KNLR C DCHE K
Sbjct: 791 IPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 850
Query: 545 LISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
LISKI R+I+VRD RFH FK+G CSCKD W
Sbjct: 851 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 194/402 (48%), Gaps = 20/402 (4%)
Query: 4 TTMSEALQLHAQILKLGTSNND--APRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
+ ++E ++HA ++ LG ++D + + K F P+ L+ R + +PA N Y
Sbjct: 18 SNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFR--EPASSLSVFRRV---SPAKNVY 72
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+N+++RA+S F F LR +PD +TFP V+K CA L A G
Sbjct: 73 LWNSIIRAFS----KNGLFPEALEFYGKLRESK---VSPDKYTFPSVIKACAGLFDAEMG 125
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
++ I MGF SD ++ NAL+ MYS G L AR++FD MP RD+VSW SLI G H
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
EA+E++ + + + + TV SVL A + + G+ +HG K + V
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL-KSGVNSVVVV 244
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
+ L+ MY K A + MI G + +E++ +FLE
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQF 303
Query: 302 KPDERTMTAVLSACRNA-DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
KPD T+++VL AC + DL Y+ +K + +E T+++ ++D+ A+ G + A
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCGDMITA 361
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
D N+M K D V W ++I D A +L K + M
Sbjct: 362 RDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 7/295 (2%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD T VL+ C L+ K ++ ++ K GF + + N LI +Y+ GD+ AR++
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F+ M +D VSW S+I G + +EA++LF M+ + + T + ++ L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 220 SMGRKVH--GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
G+ +H GI K I +VS ALIDMYAK G + + W +I
Sbjct: 425 KFGKGLHSNGI---KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVI 481
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
S G + + +M V PD T L C + R + + R+G
Sbjct: 482 SACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL-LRFGY 540
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
E +Q ++++ ++ GCL+ + M + D V W +I+A ++ + E+A
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGEGEKA 594
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 106 PFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM-P 164
PF+ + + + +++H + +G S + LI YS F + + +F R+ P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
++V W S+I + EA+E +G++ E+ V + T SV++ACA MG
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
V+ + + E V AL+DMY++ G + A W ++ISG +SHG
Sbjct: 128 VYEQILDMG-FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREA 324
+EA++++ E++ + PD T+++VL A N +V++
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 210/597 (35%), Positives = 302/597 (50%), Gaps = 76/597 (12%)
Query: 42 SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
SGD++ A + A N+ +N++L +S DP+ A LF +P PD
Sbjct: 74 SGDIDGALRVFHGMRAKNTITWNSLL--IGISKDPSRMMEAHQLF--------DEIPEPD 123
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDC----------------------YI 139
F++ +L C R ++ F +M F Y
Sbjct: 124 TFSYNIMLSCYVR---NVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 140 M--------NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI---------------- 175
M NA+I Y GDL A F P R VV+WT++I
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 176 ----------------DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
G V++ RP + ++LF MLE G+ N + + S L C++ AL
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
+GR++H IV K + T+LI MY K G + A W AMISG
Sbjct: 301 QLGRQIHQIV-SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISG 359
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
A HG +A+ LF EM ++PD T AVL AC +A LV F M + Y +EP
Sbjct: 360 YAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEP 419
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
H+ C+VDLL RAG L+EA + +MP +P A ++ TL+ AC+VH++ E AE ++
Sbjct: 420 QPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKL 479
Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
L++ ++ Y+ +N+YAS +W + A VR+ M + ++K PG S IE+ +H F
Sbjct: 480 LQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSS 539
Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
D HPE D+I KL E+ K+K GY P+L L +++E+K LL HSEKLA+A+G I
Sbjct: 540 DRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCI 599
Query: 520 RTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+ QGS+I++ KNLR C DCH+ +K IS+I +R+IIVRD RFHHFK+G CSC DYW
Sbjct: 600 KLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 306/571 (53%), Gaps = 12/571 (2%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
+ E Q H LK G +++ RN + ++ ++ S +G+ A +L P + +++
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRN-TLVYMYSLCSGNGE---AIRVLDDLPYCDLSVFSS 207
Query: 66 MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
L Y A + +LR+ + +N T+ L+ + L+ Q+H
Sbjct: 208 ALSGYLECG-------AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVH 260
Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
+ + GF ++ ALI+MY G + A+ +FD +++ T+++D
Sbjct: 261 SRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE 320
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
EA+ LF +M V N+ T +L + A+ L G +HG+V K V AL
Sbjct: 321 EALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL-KSGYRNHVMVGNAL 379
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
++MYAKSG IE A W MISG + HGL +EA++ F M P+
Sbjct: 380 VNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNR 439
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
T VL AC + V + F+ + K++ ++P IQH+ C+V LL++AG K+AEDFM
Sbjct: 440 ITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMR 499
Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
P++ D V WRTL+ AC V + +++ + +E +DSG Y+L SN++A +W
Sbjct: 500 TAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEG 559
Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
A+VR LMN +G+ K PG S I + H F+ D HPE I+ K+ E++ K+K GY
Sbjct: 560 VAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGY 619
Query: 486 NPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKL 545
+P ++ ++D+E++ L +HSEKLA+AYGLI+T + S + + KN+R C+DCH +KL
Sbjct: 620 SPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKL 679
Query: 546 ISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
ISKI +R I++RD RFHHF +G CSC DYW
Sbjct: 680 ISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 147/339 (43%), Gaps = 9/339 (2%)
Query: 48 ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
AR L P N + M++ Y S F L LF M G P+ F
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSG---FDFEVLKLFKSMF---FSGESRPNEFVATV 141
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
V K C+ +GKQ HG K G S ++ N L++MYS+ G A + D +P D
Sbjct: 142 VFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCD 201
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
+ ++S + G ++ E +++ + N+ T +S LR ++ L++ +VH
Sbjct: 202 LSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHS 261
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+ + + ALI+MY K G + A T ++ +
Sbjct: 262 RMV-RFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE 320
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
EA++LF +M+T V P+E T +L++ L+++ ++ + K G + +
Sbjct: 321 EALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS-GYRNHVMVGNAL 379
Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
V++ A++G +++A + M + D V W T+I C H
Sbjct: 380 VNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHH 417
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 11/268 (4%)
Query: 97 VPAPDNFTFPF-----VLKCCARLKLARQGKQLHGFITKMGFGS---DCYIMNALIHMYS 148
VP FP +LK CA R G+ +H + S D Y +N+LI++Y
Sbjct: 21 VPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYV 80
Query: 149 VFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-VEVNDATVV 207
+ AR+LFD MP+R+VVSW +++ G + E ++LF M +G N+
Sbjct: 81 KCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVAT 140
Query: 208 SVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
V ++C++SG + G++ HG + I + V L+ MY+ A
Sbjct: 141 VVFKSCSNSGRIEEGKQFHGCFLKYGLISHEF-VRNTLVYMYSLCSGNGEAIRVLDDLPY 199
Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
+++ +SG G KE +D+ + + + T + L N + A V
Sbjct: 200 CDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQV 259
Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAG 355
S M R+G ++ G ++++ + G
Sbjct: 260 HSRM-VRFGFNAEVEACGALINMYGKCG 286
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 263/441 (59%), Gaps = 10/441 (2%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
NA+I + G++ AR +FD M DRD +W +I +EA++LF +M + GV
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN----VSTALIDMYAKSGCIE 256
+ +++S+L CA +L GR+VH + + C+ + V++ L+ MY K G +
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHL-----VRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 257 SAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR 316
A W ++ISG ASHGL +EA+ +F EM + P++ T+ A+L+AC
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 317 NADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLW 376
A + E +F M+ ++ + PT++H+ C VD+L RAG + +A + + +M +KPDA +W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 377 RTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKK 436
L+ ACK H + AE K+ E D++G+Y+L S++ AS KW + A VR+ M
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Query: 437 GLIKPPGSSRIEVDGALHEFVMGDY-NHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLE 495
+ K PG S IEV +H F G NHPE I + L++ L++ GY+P S VL +
Sbjct: 564 NVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHD 623
Query: 496 IDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDII 555
+D+EEK L HSE+LA+AYGL++ +G IR++KNLR C DCH +KLISK+ +R+II
Sbjct: 624 VDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREII 683
Query: 556 VRDRIRFHHFKNGDCSCKDYW 576
+RD RFHHF NG+CSC+DYW
Sbjct: 684 LRDANRFHHFNNGECSCRDYW 704
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G+++ AR + ++ + M++AY AL LF M ++ P
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKG---FELEALDLFAQMQKQGVR----PSF 331
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+ +L CA L + G+Q+H + + F D Y+ + L+ MY G+L A+ +FDR
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+D++ W S+I G H EA+++F M +G N T++++L AC+ +G L G
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX-XXXXWTAMISGLA 281
++ ++ K + + +DM ++G ++ A W A++
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK 511
Query: 282 SH 283
+H
Sbjct: 512 TH 513
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 18/231 (7%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
N+++ Y G AR+LFD M +R+VVSW L+ G + + VEA +F M E V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV- 110
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
+ ++++ G + + + E+ + T + G I+ A
Sbjct: 111 ---VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSW-----TVMFGGLIDDGRIDKARK 162
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
T MI GL G EA +F EM NV T T +++ R +
Sbjct: 163 LYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVV----TWTTMITGYRQNNR 218
Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
V A +F M ++ + T G + +G +++AE+F MPMKP
Sbjct: 219 VDVARKLFEVMPEKTEVSWTSMLLGYTL-----SGRIEDAEEFFEVMPMKP 264
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 136/358 (37%), Gaps = 62/358 (17%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF--------- 191
A++ Y G +G A LF RMP+R+ VSWT + GL+D R +A +L+
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVV 173
Query: 192 ------------GRMLEAGV------EVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
GR+ EA + E N T +++ + + + RK+ ++ EK
Sbjct: 174 ASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT 233
Query: 234 ---------------RIE--------------CKCNVSTALIDMYAKSGCIESAXXXXXX 264
RIE CN A+I + + G I A
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN---AMIVGFGEVGEISKARRVFDL 290
Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREA 324
W MI G EA+DLF +M+ V+P ++ ++LS C ++
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 325 YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACK 384
V + + R + + ++ + + G L +A+ + K D ++W ++I
Sbjct: 351 RQVHAHL-VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIISGYA 408
Query: 385 VHEDTERAERLMKQHLEMGVDDSGSYILASNVYAS-VGKWSNKAEVRELMNKKGLIKP 441
H E A ++ + G + ++A S GK E+ E M K + P
Sbjct: 409 SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTP 466
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/438 (41%), Positives = 267/438 (60%), Gaps = 3/438 (0%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
N ++ Y G+L A+ +F MP RD VSW+++I G+ + E+ F + AG+
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
N+ ++ VL AC+ SG+ G+ +HG V EK +V+ ALIDMY++ G + A
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFV-EKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 261 XXXXXXXXX-XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
WT+MI+GLA HG +EA+ LF EM V PD + ++L AC +A
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
L+ E FS+MK+ Y IEP I+H+GC+VDL R+G L++A DF+ MP+ P A++WRTL
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445
Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
+ AC H + E AE++ ++ E+ ++SG +L SN YA+ GKW + A +R+ M + +
Sbjct: 446 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 505
Query: 440 KPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE-GYNPKLSEVLLEIDD 498
K S +EV +++F G+ KL E++ +LK E GY P+++ L ++++
Sbjct: 506 KTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEE 565
Query: 499 EEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRD 558
EEK Q+ HSEKLALA+ L R S+G+ IRIVKNLR C DCH MKL SK+Y +I+VRD
Sbjct: 566 EEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRD 625
Query: 559 RIRFHHFKNGDCSCKDYW 576
R RFH FK+G CSC+DYW
Sbjct: 626 RNRFHSFKDGSCSCRDYW 643
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 173/399 (43%), Gaps = 51/399 (12%)
Query: 11 QLHAQILKLGTSNNDAPRNFS-KLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
Q+H +K G D F+ KL A+S S L YAR LL P +++ +NT++R
Sbjct: 23 QIHGLFIKYGV---DTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRG 79
Query: 70 YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
YS S +P +++++F+ M+R+ G PD+F+F FV+K + R G Q+H
Sbjct: 80 YSESDEP---HNSVAVFVEMMRK---GFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQAL 133
Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
K G S ++ LI MY G + AR++FD M ++V+W ++I + A E
Sbjct: 134 KHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGARE 193
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
+F +ML V + T +V+ A Y
Sbjct: 194 IFDKML-----VRNHTSWNVMLAG-----------------------------------Y 213
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
K+G +ESA W+ MI G+A +G E+ F E++ + P+E ++T
Sbjct: 214 IKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLT 273
Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
VLSAC + E + ++ G + ++D+ +R G + A M
Sbjct: 274 GVLSACSQSGSF-EFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG 408
K V W ++I +H E A RL + GV G
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDG 371
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 36 FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
A +G+L A+ + + P + ++TM+ + + F L+ L+R
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESF----LYFRELQRAGM 265
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
+P+ + VL C++ GK LHGF+ K G+ + NALI MYS G++ +
Sbjct: 266 ---SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 156 ARELFDRMPD-RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
AR +F+ M + R +VSWTS+I GL H + EA+ LF M GV + + +S+L AC+
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX-XXXXXXXXXXW 273
+G + G +K IE + ++D+Y +SG ++ A W
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 274 TAMISGLASHG 284
++ +SHG
Sbjct: 443 RTLLGACSSHG 453
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 295/555 (53%), Gaps = 16/555 (2%)
Query: 27 PRNFSKLFTFAALSPSGDLNYARLL---LTSNPALNSYYYNTMLRAYSLSSDPTHHFHAL 83
P+ SKL T ++ DL AR + +T + L + M YS + P AL
Sbjct: 167 PKLLSKLITLFSVCRRLDL--ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRD---AL 221
Query: 84 SLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNAL 143
+++ ML P NF+ LK C LK R G+ +H I K D + N L
Sbjct: 222 IVYVDML----CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVL 277
Query: 144 IHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVND 203
+ +Y G AR++FD M +R+VV+W SLI L R E LF +M E + +
Sbjct: 278 LKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSW 337
Query: 204 ATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX 262
AT+ ++L AC+ AL G+++H I+K K++ + + +L+DMY K G +E +
Sbjct: 338 ATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP--LLNSLMDMYGKCGEVEYSRRVF 395
Query: 263 XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR 322
W M++ A +G +E I+LF M V PD T A+LS C + L
Sbjct: 396 DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTE 455
Query: 323 EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
+F MK + + P ++H+ C+VD+L RAG +KEA + MP KP A +W +L+ +
Sbjct: 456 YGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS 515
Query: 383 CKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPP 442
C++H + E K+ + + G+Y++ SN+YA W N ++RE+M ++G+ K
Sbjct: 516 CRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEA 575
Query: 443 GSSRIEVDGALHEFVM-GDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEK 501
G S ++V + FV G Y +D E+ + ++K GY+P S VL ++D+E K
Sbjct: 576 GCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETK 635
Query: 502 ATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIR 561
A + HSE+LA Y LI T +G IRI KNLR C DCH +MK++S++ +R I++RD R
Sbjct: 636 ANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKR 695
Query: 562 FHHFKNGDCSCKDYW 576
FHHF +G CSCKDYW
Sbjct: 696 FHHFVDGICSCKDYW 710
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/438 (38%), Positives = 267/438 (60%), Gaps = 5/438 (1%)
Query: 140 MNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE-AG 198
+N +I G+ G+A+++ D++V++W +I G V + + EA++ ML
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
++ N + S L ACA G L + VH ++ + IE +S+AL+D+YAK G I ++
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSG-IELNAILSSALVDVYAKCGDIGTS 219
Query: 259 XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
W AMI+G A+HGL EAI +F EME +V PD T +L+ C +
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
L+ E F M +R+ I+P ++H+G +VDLL RAG +KEA + + +MP++PD V+WR+
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 379 LIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
L+ + + +++ E E + Q+L SG Y+L SN+Y+S KW + +VRELM+K+G+
Sbjct: 340 LLSSSRTYKNPELGE-IAIQNLSKA--KSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 439 IKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDD 498
K G S +E G +H F GD +H E I+ L+ ++ K K +G+ VL+++ +
Sbjct: 397 RKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSE 456
Query: 499 EEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRD 558
EEK L +HSEKLALAY ++++S G++IRI KN+R C DCH ++K +SK+ R II+RD
Sbjct: 457 EEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRD 516
Query: 559 RIRFHHFKNGDCSCKDYW 576
RIRFH F++G CSC+DYW
Sbjct: 517 RIRFHRFEDGLCSCRDYW 534
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 35/278 (12%)
Query: 10 LQLHAQILKLG--------TSNNDAPRNFSK-------LFTFAALSPS------------ 42
LQ HAQI KLG S A R ++ L F +LSP
Sbjct: 50 LQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLM 109
Query: 43 --GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP 100
G+ A+ +L + N +N M+ Y + AL + + P
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNML------SFTDIKP 163
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
+ F+F L CARL K +H + G + + +AL+ +Y+ GD+G +RE+F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
+ DV W ++I G H EAI +F M V + T + +L C+ G L
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
G++ G++ + I+ K A++D+ ++G ++ A
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEA 321
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 332 bits (850), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 197/535 (36%), Positives = 287/535 (53%), Gaps = 12/535 (2%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G A+L+L + ++ YS + T A+ F ML P+
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTE---AVKAFQSMLVEKVQ----PNE 267
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T+ VL C LK GK +HG + K GF S +L+ MY + + +F
Sbjct: 268 YTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKC 327
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ + VSWTSLI GLV + R A+ F +M+ ++ N T+ S LR C++ G
Sbjct: 328 IEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG 387
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
R++HGIV K + + LID+Y K GC + A MI A
Sbjct: 388 RQIHGIVT-KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQ 446
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
+G +EA+DLF M ++P++ T+ +VL AC N+ LV E +F +K I T
Sbjct: 447 NGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTND 505
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
H+ C+VDLL RAG L+EAE + + PD VLWRTL+ ACKVH E AER+ ++ LE+
Sbjct: 506 HYACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEI 564
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD-Y 461
D G+ IL SN+YAS GKW+ E++ M L K P S +E++ H F+ GD +
Sbjct: 565 EPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLF 624
Query: 462 NHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRT 521
+HP ++ I L+E++ K K GY S V ++++ K L HSEKLA+A+ + R
Sbjct: 625 SHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRN 684
Query: 522 SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
GS IRI+KNLR C DCH ++K++S++ +R+II RD RFHHF++G CSC DYW
Sbjct: 685 VGGS-IRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 177/372 (47%), Gaps = 11/372 (2%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD++YAR + + +N+++ AY + + A+ ++ M+ T+ V PD
Sbjct: 113 GDIDYARQVFDGMSERHIVTWNSLI-AYLIKHRRSKE--AVEMYRLMI---TNNV-LPDE 165
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFG-SDCYIMNALIHMYSVFGDLGVARELFD 161
+T V K + L L ++ ++ HG +G S+ ++ +AL+ MY FG A+ + D
Sbjct: 166 YTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLD 225
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
R+ ++DVV T+LI G EA++ F ML V+ N+ T SVL +C + +
Sbjct: 226 RVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGN 285
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
G+ +HG++ K E T+L+ MY + ++ + WT++ISGL
Sbjct: 286 GKLIHGLMV-KSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLV 344
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
+G + A+ F +M ++KP+ T+++ L C N + E + + K YG +
Sbjct: 345 QNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK-YGFDRDK 403
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
++DL + GC A + + + D + T+I++ + A L ++ +
Sbjct: 404 YAGSGLIDLYGKCGCSDMARLVFDTLS-EVDVISLNTMIYSYAQNGFGREALDLFERMIN 462
Query: 402 MGVDDSGSYILA 413
+G+ + +L+
Sbjct: 463 LGLQPNDVTVLS 474
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 209 VLRACADSGALSMGRKVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
+LR C D ++S + + ++K E + L+D K G I+ A
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEIS---GSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
W ++I+ L H KEA++++ M T NV PDE T+++V A + L +EA
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 328 FSDMKKRYGIEPTIQHFG-CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+ G+E + G +VD+ + G +EA+ ++ + K ++ ++ +
Sbjct: 188 HG-LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 387 EDTE 390
EDTE
Sbjct: 247 EDTE 250
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 330 bits (846), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 279/523 (53%), Gaps = 40/523 (7%)
Query: 89 MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK---MGFGSDCYIMNALIH 145
M+RR D FT+P V++ CA L + GKQ+H ++ + F D N+L+
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVS 328
Query: 146 MYSVFGDLGVARELFDRMPDRDVVSWTSL------------------------------- 174
+Y G AR +F++MP +D+VSW +L
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
I GL ++ E ++LF M G E D +++CA GA G++ H + K
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL-KIG 447
Query: 235 IECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFL 294
+ + ALI MYAK G +E A W A+I+ L HG EA+D++
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507
Query: 295 EMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
EM ++PD T+ VL+AC +A LV + F M+ Y I P H+ ++DLL R+
Sbjct: 508 EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRS 567
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS 414
G +AE + ++P KP A +W L+ C+VH + E + + + G+Y+L S
Sbjct: 568 GKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLS 627
Query: 415 NVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLD 474
N++A+ G+W A VR+LM +G+ K S IE++ +H F++ D +HPEA+ +++ L
Sbjct: 628 NMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQ 687
Query: 475 EMVDKLKKEGYNPKLSEVLLEID-DEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNL 533
++ ++++ GY P S VL +++ D K L HSEK+A+A+GL++ G+ IRI KNL
Sbjct: 688 DLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNL 747
Query: 534 RSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
R+C DCH F + +S + QRDII+RDR RFHHF+NG+CSC ++W
Sbjct: 748 RTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 182/446 (40%), Gaps = 77/446 (17%)
Query: 27 PRNFSKLFTFAALSPSGDLNYARLLLTSNPAL--NSYYYNTMLRAYSLSSDPTHHFHALS 84
P ++ + SGD+ AR + P ++ YN M+ +S ++D + A++
Sbjct: 78 PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDG---YSAIN 134
Query: 85 LFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKL-ARQGKQLHGFITKMGFGSDCYIMNAL 143
LF M H PDNFTF VL A + +Q Q H K G G + NAL
Sbjct: 135 LFCKM----KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNAL 190
Query: 144 IHMYSVFGD----LGVARELFDRMPDRDVVSWTSL------------------------- 174
+ +YS L AR++FD + ++D SWT++
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK 250
Query: 175 -------IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
I G V+ EA+E+ RM+ +G+E+++ T SV+RACA +G L +G++VH
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 228 IVKEKK-----------RIECKCN-----------------VS-TALIDMYAKSGCIESA 258
V ++ + KC VS AL+ Y SG I A
Sbjct: 311 YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 259 XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
W MISGLA +G +E + LF M+ +P + + + +C
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
+ + K G + ++ ++ + A+ G ++EA MP D+V W
Sbjct: 431 GAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNA 488
Query: 379 LIWACKVHEDTERAERLMKQHLEMGV 404
LI A H A + ++ L+ G+
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGI 514
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 272/488 (55%), Gaps = 2/488 (0%)
Query: 89 MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS 148
L++ G PD+ P K CA L G+ +H K G+ +D ++ ++L+ MY+
Sbjct: 103 FLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYA 162
Query: 149 VFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
G++ AR++FD MP R+VV+W+ ++ G EA+ LF L + VND + S
Sbjct: 163 KCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSS 222
Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX 268
V+ CA+S L +GR++HG+ + V ++L+ +Y+K G E A
Sbjct: 223 VISVCANSTLLELGRQIHGLSIKSSFDSSS-FVGSSLVSLYSKCGVPEGAYQVFNEVPVK 281
Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
W AM+ A H ++ I+LF M+ +KP+ T VL+AC +A LV E F
Sbjct: 282 NLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYF 341
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED 388
MK+ IEPT +H+ +VD+L RAG L+EA + + MP+ P +W L+ +C VH++
Sbjct: 342 DQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKN 400
Query: 389 TERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
TE A + E+G SG +I SN YA+ G++ + A+ R+L+ +G K G S +E
Sbjct: 401 TELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVE 460
Query: 449 VDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHH 508
+H F G+ H ++ I+ KL E+ ++++K GY S VL E+D +EK + +H
Sbjct: 461 ERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYH 520
Query: 509 SEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNG 568
SE+LA+A+GLI IR++KNLR C DCH +K +S +R IIVRD RFH F++G
Sbjct: 521 SERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDG 580
Query: 569 DCSCKDYW 576
CSC DYW
Sbjct: 581 KCSCNDYW 588
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 3/291 (1%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L AR + +G QLHG++ K G + N LI+ YS +R F+ P +
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
+W+S+I ++ P ++E +M+ + +D + S ++CA +GR VH
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVH- 139
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+ K + V ++L+DMYAK G I A W+ M+ G A G +
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENE 199
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
EA+ LF E N+ ++ + ++V+S C N+ L+ + + + + + +
Sbjct: 200 EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSL 258
Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
V L ++ G + A N +P+K + +W ++ A H T++ L K+
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQKVIELFKR 308
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/609 (33%), Positives = 312/609 (51%), Gaps = 51/609 (8%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
T++ A LHA I+KLG N G ++A + P + +
Sbjct: 18 TLTTAKALHAHIVKLGIVQCCPLAN----TLVNVYGKCGAASHALQVFDEMPHRDHIAWA 73
Query: 65 TMLRAYSLS--SDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
++L A + + S T + LR PD+F F ++K CA L G+
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLR--------PDDFVFSALVKACANLGSIDHGR 125
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
Q+H + +D + ++L+ MY+ G L A+ +FD + ++ +SWT+++ G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 183 RPVEAIELF---------------------GRMLEA----------GVEVNDATVV-SVL 210
R EA+ELF G+ LEA V++ D V+ S++
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
ACA+ A GR+VHG+V C +S ALIDMYAK + +A
Sbjct: 246 GACANLAASIAGRQVHGLVIALGFDSC-VFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304
Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
WT++I G+A HG ++A+ L+ +M + VKP+E T ++ AC + V + +F
Sbjct: 305 VSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQS 364
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
M K YGI P++QH+ C++DLL R+G L EAE+ ++ MP PD W L+ ACK +
Sbjct: 365 MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQ 424
Query: 391 RAERLMKQHL--EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
R+ HL + D +YIL SN+YAS W +E R + + + K PG S +E
Sbjct: 425 MGIRI-ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
Query: 449 VDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK-KEGYNPKLSEVLLEIDDEEKATQLLH 507
V F G+ +HP ++IF L ++ ++++ + GY P S +L ++D++EK L
Sbjct: 484 VRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFW 543
Query: 508 HSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKN 567
HSE+ A+AYGL++ G+ IRIVKNLR C DCH +K IS+I +R+IIVRD R+HHFK
Sbjct: 544 HSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKG 603
Query: 568 GDCSCKDYW 576
G CSC D+W
Sbjct: 604 GKCSCNDFW 612
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 163/380 (42%), Gaps = 63/380 (16%)
Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV 168
L+ CAR + K LH I K+G C + N L+++Y G A ++FD MP RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRML--------EAGVEVNDATVVSVLRACADSGALS 220
++W S++ L L G+ L +G+ +D ++++ACA+ G++
Sbjct: 70 IAWASVLTAL-------NQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSID 122
Query: 221 MGRKVHG--IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
GR+VH IV E E V ++L+DMYAK G + SA WTAM+S
Sbjct: 123 HGRQVHCHFIVSEYANDEV---VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVS 179
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR---- 334
G A G +EA++LF + N+ + TA++S + EA+ VF++M++
Sbjct: 180 GYAKSGRKEEALELFRILPVKNL----YSWTALISGFVQSGKGLEAFSVFTEMRRERVDI 235
Query: 335 -------------------------YGIEPTIQHFGCV------VDLLARAGCLKEAEDF 363
+G+ + CV +D+ A+ + A+D
Sbjct: 236 LDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDI 295
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYA--SVG 421
+ M + D V W +LI H E+A L + GV + +YA VG
Sbjct: 296 FSRMRHR-DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN-EVTFVGLIYACSHVG 353
Query: 422 KWSNKAEVRELMNKKGLIKP 441
E+ + M K I+P
Sbjct: 354 FVEKGRELFQSMTKDYGIRP 373
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 297/575 (51%), Gaps = 24/575 (4%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+H + LKLG N + N L T A +G LN R + +S P + +N+++ A
Sbjct: 436 QIHGESLKLGIDLNVSVSN--ALMTLYA--ETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ S +L + + TF VL + L GKQ+HG K
Sbjct: 492 ARSE------RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK 545
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDGLVDHDRPVEAIE 189
+ NALI Y G++ ++F RM +R D V+W S+I G + ++ +A++
Sbjct: 546 NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALD 605
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
L ML+ G ++ +VL A A L G +VH + +E V +AL+DMY
Sbjct: 606 LVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA-CSVRACLESDVVVGSALVDMY 664
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNVKPDERTM 308
+K G ++ A W +MISG A HG +EA+ LF M+ PD T
Sbjct: 665 SKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTF 724
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
VLSAC +A L+ E + F M YG+ P I+HF C+ D+L RAG L + EDF+ MP
Sbjct: 725 VGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP 784
Query: 369 MKPDAVLWRTLIWAC------KVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGK 422
MKP+ ++WRT++ AC K + AE L + E V+ Y+L N+YA+ G+
Sbjct: 785 MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN----YVLLGNMYAAGGR 840
Query: 423 WSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKK 482
W + + R+ M + K G S + + +H FV GD +HP+AD I+ KL E+ K++
Sbjct: 841 WEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Query: 483 EGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGL-IRTSQGSKIRIVKNLRSCEDCHE 541
GY P+ L +++ E K L +HSEKLA+A+ L + S IRI+KNLR C DCH
Sbjct: 901 AGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHS 960
Query: 542 FMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
K ISKI R II+RD RFHHF++G CSC D+W
Sbjct: 961 AFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 166/379 (43%), Gaps = 20/379 (5%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+H + KL + + N + + G + YA NS +N+++ Y
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCI---GSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTF-PFVLKCCARLKL-ARQGKQLHGFI 128
S + D F S + RPT +TF V C+ + R +Q+ I
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTE-------YTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
K G +D ++ + L+ ++ G L AR++F++M R+ V+ L+ GLV EA
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 189 ELFGRMLEAGVEVNDATVVSVLR-----ACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
+LF M + ++V+ + V +L + A+ L GR+VHG V ++ +
Sbjct: 295 KLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
L++MYAK G I A W +MI+GL +G EA++ + M ++ P
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
T+ + LS+C + + + + K GI+ + ++ L A G L E
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 364 MNAMPMKPDAVLWRTLIWA 382
++MP + D V W ++I A
Sbjct: 473 FSSMP-EHDQVSWNSIIGA 490
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 5/300 (1%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P +FT L CA LK A+ G+Q+HG K+G + + NAL+ +Y+ G L R++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPV-EAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
F MP+ D VSW S+I L +R + EA+ F AG ++N T SVL A +
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMI 277
+G+++HG+ K I + ALI Y K G ++ W +MI
Sbjct: 533 GELGKQIHGLAL-KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
SG + L +A+DL M + D VLSA + + V + R +
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA-CSVRACL 650
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
E + +VD+ ++ G L A F N MP++ ++ W ++I H E A +L +
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFE 709
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 26/284 (9%)
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
FV C AR H + K D Y+ N LI+ Y GD AR++FD MP
Sbjct: 7 LSFVQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM--G 222
R+ VSW ++ G + EA+ M++ G+ N VSVLRAC + G++ + G
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKS-GCIESAXXXXXXXXXXXXXXWTAMISGLA 281
R++HG++ K VS LI MY K G + A W ++IS +
Sbjct: 124 RQIHGLMF-KLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTA-VLSACRNADLVREAYMVFSDMKKRYGIEPT 340
G + A +F M+ +P E T + V +AC + D++ I T
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---------LTEPDVRLLEQIMCT 233
Query: 341 IQHFGCVVDL---------LARAGCLKEAEDFMNAMPMKPDAVL 375
IQ G + DL A++G L A N M + L
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 172/405 (42%), Gaps = 26/405 (6%)
Query: 37 AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY---SLSSDPTHHFHALSLFIFMLRRP 93
+A + SG L+YAR + N+ N ++ + T F ++ I +
Sbjct: 251 SAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV---- 306
Query: 94 THGVPAPDNFTFPFVLKCCARLKLA-----RQGKQLHGFITKMGFGSDCY-IMNALIHMY 147
+P+++ +L LA ++G+++HG + G I N L++MY
Sbjct: 307 -----SPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMY 359
Query: 148 SVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVV 207
+ G + AR +F M D+D VSW S+I GL + +EA+E + M + T++
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 208 SVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
S L +CA +G+++HG K I+ +VS AL+ +YA++G +
Sbjct: 420 SSLSSCASLKWAKLGQQIHG-ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 268 XXXXXWTAMISGLA-SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
W ++I LA S EA+ FL + K + T ++VLSA +
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 327 VFS-DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
+ +K E T ++ ++ + G + E + M + D V W ++I
Sbjct: 539 IHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 386 HEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEV 429
+E +A L+ L+ G DS Y + +ASV EV
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV 641
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 325 bits (832), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 268/531 (50%), Gaps = 10/531 (1%)
Query: 48 ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
AR L P N +N + P A+ FI R H P++ TF
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPRE---AIEAFIEFRRIDGH----PNSITFCA 214
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
L C+ G QLHG + + GF +D + N LI Y + + +F M ++
Sbjct: 215 FLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKN 274
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
VSW SL+ V + +A L+ R + VE +D + SVL ACA L +GR +H
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
K +E V +AL+DMY K GCIE + ++I G A G
Sbjct: 335 HAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVD 393
Query: 288 EAIDLFLEM--ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
A+ LF EM C P+ T ++LSAC A V +F M+ YGIEP +H+
Sbjct: 394 MALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYS 453
Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
C+VD+L RAG ++ A +F+ MP++P +W L AC++H + + ++
Sbjct: 454 CIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPK 513
Query: 406 DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPE 465
DSG+++L SN +A+ G+W+ VRE + G+ K G S I V +H F D +H
Sbjct: 514 DSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHIL 573
Query: 466 ADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGS 525
I L ++ ++++ GY P L L ++++EEKA ++ HHSEKLALA+GL+
Sbjct: 574 NKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSV 633
Query: 526 KIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
IRI KNLR C DCH F K +S +R+IIVRD RFH FK+G CSCKDYW
Sbjct: 634 PIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 181/411 (44%), Gaps = 13/411 (3%)
Query: 1 MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
+ ++M +HA+I+K + + P F + S ARL+L PA N
Sbjct: 17 ISASSMRLGRVVHARIVK---TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNV 73
Query: 61 YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+ +++ + + HF + F +RR GV P++FTFP K A L+L
Sbjct: 74 VSWTSLISGLAQNG----HFSTALVEFFEMRR--EGV-VPNDFTFPCAFKAVASLRLPVT 126
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
GKQ+H K G D ++ + MY AR+LFD +P+R++ +W + I V
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
RP EAIE F N T + L AC+D L++G ++HG+V + + +
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL-RSGFDTDVS 245
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
V LID Y K I S+ W ++++ + ++A L+L
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
V+ + +++VLSAC + + + K +E TI +VD+ + GC++++
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDS 364
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYI 411
E + MP K + V +LI + A L ++ G + +Y+
Sbjct: 365 EQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 5/304 (1%)
Query: 119 RQGKQLHGFITK-MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
R G+ +H I K + ++ N LI+MYS AR + P R+VVSWTSLI G
Sbjct: 23 RLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
L + A+ F M GV ND T +A A G+++H + + RI
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI-L 141
Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
V + DMY K+ + A W A IS + G +EAI+ F+E
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
+ P+ T A L+AC + L M + R G + + ++D + +
Sbjct: 202 RIDGHPNSITFCAFLNACSDW-LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVY 417
+ +E M K +AV W +L+ A + + E+A L + + V+ S ++++S +
Sbjct: 261 RSSEIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS-DFMISSVLS 318
Query: 418 ASVG 421
A G
Sbjct: 319 ACAG 322
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 324 bits (831), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 187/569 (32%), Positives = 297/569 (52%), Gaps = 22/569 (3%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALN--SYYYNTMLR 68
QLH + K G P + L + G + AR + NP + S YN ++
Sbjct: 74 QLHCHVTKGGCETE--PFVLTALISM--YCKCGLVADARKVFEENPQSSQLSVCYNALIS 129
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
Y+ +S T +M RR + D+ T ++ C + G+ LHG
Sbjct: 130 GYTANSKVTDA-------AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
K G S+ ++N+ I MY G + R LFD MP + +++W ++I G + + +
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVL 242
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
EL+ +M +GV + T+VSVL +CA GA +G +V +V+ + VS A I M
Sbjct: 243 ELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP-NVFVSNASISM 301
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
YA+ G + A WTAMI HG+ + + LF +M ++PD
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
VLSAC ++ L + +F MK+ Y +EP +H+ C+VDLL RAG L EA +F+ +MP
Sbjct: 362 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP 421
Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
++PD +W L+ ACK+H++ + AE + +E ++ G Y+L SN+Y+
Sbjct: 422 VEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWR 481
Query: 429 VRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
+R +M ++ K PG S +E G +H F+ GD +H + + + LDE+ + + N
Sbjct: 482 IRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGN-- 539
Query: 489 LSEVLLEID-DEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLIS 547
++ D EE ++ HSE+LA+A+G++ + G++I ++KNLR CEDCH F+K +S
Sbjct: 540 -----MDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVS 594
Query: 548 KIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
KI R +VRD RFH+FK+G CSCKDYW
Sbjct: 595 KIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 189/388 (48%), Gaps = 13/388 (3%)
Query: 57 ALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLK 116
A+ S +N LR + S + ++SL+ MLR + +PD F+FPF+LK CA L
Sbjct: 15 AVASTPWNVRLRELAYQSLFSE---SISLYRSMLRSGS----SPDAFSFPFILKSCASLS 67
Query: 117 LARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVS--WTSL 174
L G+QLH +TK G ++ +++ ALI MY G + AR++F+ P +S + +L
Sbjct: 68 LPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNAL 127
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
I G + + +A +F RM E GV V+ T++ ++ C L +GR +HG K
Sbjct: 128 ISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV-KGG 186
Query: 235 IECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFL 294
++ + V + I MY K G +E+ W A+ISG + +GL + ++L+
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 295 EMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
+M++ V PD T+ +VLS+C + + + V + + G P + + + AR
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARC 305
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGS-YILA 413
G L +A + MP+K V W +I +H E L ++ G+ G+ +++
Sbjct: 306 GNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 414 SNVYASVGKWSNKAEVRELMNKKGLIKP 441
+ + G E+ M ++ ++P
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEP 392
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 284/526 (53%), Gaps = 7/526 (1%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G+++ +R +L P + +N ++ Y+ DP AL+ F M GV +
Sbjct: 394 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK---ALAAFQTM---RVEGVSSNYI 447
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+ C L +GK LH +I GF SD ++ N+LI MY+ GDL +++LF+
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 507
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ +R++++W +++ H E ++L +M GV ++ + L A A L G
Sbjct: 508 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG 567
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
+++HG+ K E + A DMY+K G I W +IS L
Sbjct: 568 QQLHGLAV-KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 626
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
HG +E F EM +KP T ++L+AC + LV + + + + +G+EP I+
Sbjct: 627 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIE 686
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
H CV+DLL R+G L EAE F++ MPMKP+ ++WR+L+ +CK+H + +R + + ++
Sbjct: 687 HCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKL 746
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
+D Y+L+SN++A+ G+W + VR+ M K + K S +++ + F +GD
Sbjct: 747 EPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 806
Query: 463 HPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTS 522
HP+ I+ KL+++ +K+ GY S+ L + D+E+K L +HSE+LALAY L+ T
Sbjct: 807 HPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTP 866
Query: 523 QGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNG 568
+GS +RI KNLR C DCH K +S++ R I++RD+ RFHHF+ G
Sbjct: 867 EGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 140/282 (49%), Gaps = 4/282 (1%)
Query: 100 PDNFTFPFVLKCCARL-KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
P +F ++ C R + R+G Q+HGF+ K G SD Y+ A++H+Y V+G + +R+
Sbjct: 39 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 98
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
+F+ MPDR+VVSWTSL+ G D P E I+++ M GV N+ ++ V+ +C
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 158
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
S+GR++ G V K +E K V +LI M G ++ A W ++ +
Sbjct: 159 ESLGRQIIGQVV-KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
A +G +E+ +F M + + + T++ +LS + D + + + + G +
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG-LVVKMGFD 276
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ ++ + A AG EA MP K D + W +L+
Sbjct: 277 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM 317
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 171/400 (42%), Gaps = 25/400 (6%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+ Q++K G + A N + L G+++YA + ++ +N++ AY
Sbjct: 164 QIIGQVVKSGLESKLAVENS----LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 219
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ + F IF L R H ++ T +L + + G+ +HG + K
Sbjct: 220 AQNGHIEESFR-----IFSLMRRFH--DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 272
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
MGF S + N L+ MY+ G A +F +MP +D++SW SL+ V+ R ++A+ L
Sbjct: 273 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 332
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
M+ +G VN T S L AC GR +HG+V + + AL+ MY
Sbjct: 333 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI-IGNALVSMYG 391
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
K G + + W A+I G A +A+ F M V + T+ +
Sbjct: 392 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 451
Query: 311 VLSAC-RNADLVRE-----AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
VLSAC DL+ AY+V + G E ++ + A+ G L ++D
Sbjct: 452 VLSACLLPGDLLERGKPLHAYIVSA------GFESDEHVKNSLITMYAKCGDLSSSQDLF 505
Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
N + + + + W ++ A H E +L+ + GV
Sbjct: 506 NGLDNR-NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 544
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 115/240 (47%), Gaps = 14/240 (5%)
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL-SM 221
MP R+ VSW +++ G+V +E +E F +M + G++ + + S++ AC SG++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
G +VHG V K + VSTA++ +Y G + + WT+++ G +
Sbjct: 61 GVQVHGFVA-KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC---RNADLVRE--AYMVFSDMKKRYG 336
G +E ID++ M V +E +M+ V+S+C ++ L R+ +V S ++ +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
+E ++ + +L G + A + M + D + W ++ A + E + R+
Sbjct: 180 VENSL------ISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIEESFRIF 232
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 271/498 (54%), Gaps = 17/498 (3%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
AL LF+ ++ T GV D+F F VLK CA L+ GKQ+H + K+G S+ +
Sbjct: 269 ALKLFVDLV---TEGVEW-DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGT 324
Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
L+ Y A F + + + VSW+++I G + EA++ F + +
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASI 384
Query: 202 -NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
N T S+ +AC+ ++G +VH ++ I + S ALI MY+K GC++ A
Sbjct: 385 LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES-ALITMYSKCGCLDDANE 443
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
WTA ISG A +G EA+ LF +M +C +KP+ T AVL+AC +A L
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
V + M ++Y + PTI H+ C++D+ AR+G L EA FM MP +PDA+ W+ +
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
C H++ E E ++ ++ +D+ Y+L N+Y GKW AE+ +LMN++ L K
Sbjct: 564 SGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Query: 441 PPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEE 500
S I+ G +H F++GD +HP+ I+ KL E ++ + + + + E
Sbjct: 624 ELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKE---------FDGFMEGDMFQCNMTE 674
Query: 501 KATQLLHHSEKLALAYGLIRT--SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRD 558
+ QLL HSE+LA+A+GLI + + I++ KNLR+C DCHEF K +S + +I++RD
Sbjct: 675 RREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRD 734
Query: 559 RIRFHHFKNGDCSCKDYW 576
RFHHFK G CSC DYW
Sbjct: 735 SRRFHHFKEGKCSCNDYW 752
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 156/357 (43%), Gaps = 11/357 (3%)
Query: 58 LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKL 117
LN+ TM+ AY+ A+ LF ML P + + +LK +
Sbjct: 147 LNAVSRTTMISAYAEQGILDK---AVGLFSGMLASGDK----PPSSMYTTLLKSLVNPRA 199
Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
G+Q+H + + G S+ I +++MY G L A+ +FD+M + V+ T L+ G
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
R +A++LF ++ GVE + VL+ACA L++G+++H V K +E
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVA-KLGLES 318
Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
+ +V T L+D Y K ESA W+A+ISG +EA+ F +
Sbjct: 319 EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
Query: 298 TCNVKP-DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
+ N + T T++ AC V +D KR I ++ + ++ GC
Sbjct: 379 SKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE-SALITMYSKCGC 437
Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
L +A + +M PD V W I + + A RL ++ + G+ + +A
Sbjct: 438 LDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIA 493
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 145/336 (43%), Gaps = 11/336 (3%)
Query: 86 FIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIM-NALI 144
F F+ GV ++++ + + C L+ G+ LH + +MG + ++ N ++
Sbjct: 68 FEFLQEMDKAGVSV-SSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCVL 125
Query: 145 HMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA 204
MY L A +LFD M + + VS T++I + +A+ LF ML +G + +
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 205 TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
++L++ + AL GR++H V + + ++ T +++MY K G + A
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVI-RAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREA 324
T ++ G G ++A+ LF+++ T V+ D + VL AC + + +
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 325 YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACK 384
+ + + K G+E + +VD + + A + +P+ V W +I
Sbjct: 305 KQIHACVAK-LGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAIISGYC 362
Query: 385 VHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
E A + K + + IL S Y S+
Sbjct: 363 QMSQFEEAVKTFK-----SLRSKNASILNSFTYTSI 393
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/569 (32%), Positives = 302/569 (53%), Gaps = 12/569 (2%)
Query: 8 EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
EA H +I+++ + N A S G + AR + + +NTM+
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNV----LINAYSKCGFVELARQVFDGMLERSLVSWNTMI 134
Query: 68 RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
Y+ + + AL +F+ M G + FT VL C A + K+LH
Sbjct: 135 GLYTRNRMESE---ALDIFLEM---RNEGFKFSE-FTISSVLSACGVNCDALECKKLHCL 187
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
K + Y+ AL+ +Y+ G + A ++F+ M D+ V+W+S++ G V + EA
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
+ L+ R +E N T+ SV+ AC++ AL G+++H ++ K V+++ +D
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC-KSGFGSNVFVASSAVD 306
Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
MYAK G + + W +ISG A H KE + LF +M+ + P+E T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
+++LS C + LV E F M+ YG+ P + H+ C+VD+L RAG L EA + + ++
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
P P A +W +L+ +C+V+++ E AE ++ E+ +++G+++L SN+YA+ +W A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 428 EVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNP 487
+ R+L+ + K G S I++ +H F +G+ HP I LD +V K +K GY P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 488 KLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLIS 547
+ L +++ +K L+ HSEKLAL +GL+ + S +RI+KNLR C DCHEFMK S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606
Query: 548 KIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+R IIVRD RFHHF +G CSC D+W
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 142/274 (51%), Gaps = 5/274 (1%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L+ CAR + K HG I ++ D ++N LI+ YS G + +AR++FD M +R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 168 VVSWTSLIDGLVDHDR-PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
+VSW ++I GL +R EA+++F M G + ++ T+ SVL AC + +K+H
Sbjct: 127 LVSWNTMI-GLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC 286
+ K I+ V TAL+D+YAK G I+ A W++M++G +
Sbjct: 186 -CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
+EA+ L+ + +++ ++ T+++V+ AC N + E + + + K G +
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSNVFVASS 303
Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
VD+ A+ G L+E+ + + K + LW T+I
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEK-NLELWNTII 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS--TALIDMYAKSGCIESAX 259
N V +L+ CA +GA+ + HG + RI+ + +V+ LI+ Y+K G +E A
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKI---IRIDLEGDVTLLNVLINAYSKCGFVELAR 116
Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR-NA 318
W MI + + EA+D+FLEM K E T+++VLSAC N
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
D + + +K I+ + ++DL A+ G +K+A +M K +V W +
Sbjct: 177 DALECKKLHCLSVKT--CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK-SSVTWSS 233
Query: 379 LIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYA 418
++ +++ E A L ++ M ++ + + L+S + A
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQN-QFTLSSVICA 272
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 262/472 (55%), Gaps = 38/472 (8%)
Query: 38 ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
A S +G L YA + T P N+Y +NTM+RA SL +P H A++++ R+
Sbjct: 56 ACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVY----RKLWALC 111
Query: 98 PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
PD FTFPFVLK R+ G+Q+HG + GF S +++ LI MY G LG AR
Sbjct: 112 AKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDAR 171
Query: 158 ELFDRMPDRDV---------------------------------VSWTSLIDGLVDHDRP 184
++FD M +DV VSWT +I G R
Sbjct: 172 KMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRA 231
Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
EAIE+F RML VE ++ T+++VL ACAD G+L +G ++ V + + + +++ A
Sbjct: 232 SEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV-DHRGMNRAVSLNNA 290
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
+IDMYAKSG I A WT +I+GLA+HG EA+ +F M V+P+
Sbjct: 291 VIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
+ T A+LSAC + V +F+ M+ +YGI P I+H+GC++DLL RAG L+EA++ +
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
+MP K +A +W +L+ A VH D E ER + + +++ ++SG+Y+L +N+Y+++G+W
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEM 476
+R +M G+ K G S IEV+ +++F+ GD HP+ + I L EM
Sbjct: 471 ESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 120/319 (37%), Gaps = 39/319 (12%)
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
KQ H ++ G D + I S G L A +F P + ++I L
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 182 DRPVE---AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
D P AI ++ ++ + + T VL+ + GR++HG V +
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG-FDSS 150
Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM---------------------- 276
+V T LI MY G + A W A+
Sbjct: 151 VHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC 210
Query: 277 -----------ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY 325
ISG A G EAI++F M NV+PDE T+ AVLSAC + +
Sbjct: 211 WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
+ S + R G+ + V+D+ A++G + +A D + + + V W T+I
Sbjct: 271 RICSYVDHR-GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER-NVVTWTTIIAGLAT 328
Query: 386 HEDTERAERLMKQHLEMGV 404
H A + + ++ GV
Sbjct: 329 HGHGAEALAMFNRMVKAGV 347
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 284/521 (54%), Gaps = 14/521 (2%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N+M+ AY + AL+L+ M+ + D FT VL L G+
Sbjct: 208 WNSMIVAYGQHKEGAK---ALALYKEMIFKGF----KIDMFTLASVLNALTSLDHLIGGR 260
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGD---LGVARELFDRMPDRDVVSWTSLIDGL- 178
Q HG + K GF + ++ + LI YS G + + ++F + D+V W ++I G
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYS 320
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
++ + EA++ F +M G +D + V V AC++ + S +++HG+ + +
Sbjct: 321 MNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR 380
Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
+V+ ALI +Y KSG ++ A + MI G A HG EA+ L+ M
Sbjct: 381 ISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLD 440
Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
+ P++ T AVLSAC + V E F+ MK+ + IEP +H+ C++DLL RAG L+
Sbjct: 441 SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYA 418
EAE F++AMP KP +V W L+ AC+ H++ AER + + M + Y++ +N+YA
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYA 560
Query: 419 SVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVD 478
KW A VR+ M K + K PG S IEV H FV D++HP + L+EM+
Sbjct: 561 DARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMK 620
Query: 479 KLKKEGY--NPKLSEV-LLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRS 535
K+KK GY + K + V E + ++ +L HHSEKLA+A+GL+ T G ++ +VKNLR
Sbjct: 621 KMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRI 680
Query: 536 CEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
C DCH +K +S + R+IIVRD +RFH FK+G CSC DYW
Sbjct: 681 CGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 191/466 (40%), Gaps = 50/466 (10%)
Query: 12 LHAQILK-LGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
LHA +K + S+ +F L+ S G L+YAR S N + YN +++AY
Sbjct: 30 LHALYVKSIVASSTYLSNHFVNLY-----SKCGRLSYARAAFYSTEEPNVFSYNVIVKAY 84
Query: 71 SLSS----------------------------DPTHHFHALSLFIFMLRRPTHGVPAPDN 102
+ S D F A+ LF M R+ V D
Sbjct: 85 AKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM-RKLGFEV---DG 140
Query: 103 FTFP-FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
FT + CC R+ L KQLH F GF S + NA + YS G L A +F
Sbjct: 141 FTLSGLIAACCDRVDLI---KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 162 RMPD-RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
M + RD VSW S+I H +A+ L+ M+ G +++ T+ SVL A L
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES---AXXXXXXXXXXXXXXWTAMI 277
GR+ HG + K +V + LID Y+K G + + W MI
Sbjct: 258 GGRQFHGKLI-KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316
Query: 278 SGLA-SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
SG + + L +EA+ F +M+ +PD+ + V SAC N + + K +
Sbjct: 317 SGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHI 376
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
I ++ L ++G L++A + MP + +AV + +I H A L
Sbjct: 377 PSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 397 KQHLEMGV-DDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
++ L+ G+ + +++ + A GK E M + I+P
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 163/393 (41%), Gaps = 46/393 (11%)
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG-------------------------- 154
GK LH K S Y+ N +++YS G L
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 155 -----VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
+AR+LFD +P D VS+ +LI G D A+ LF RM + G EV+ T+ +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXX 268
+ AC D + + +++H + +V+ A + Y+K G + E+
Sbjct: 147 IAACCDR--VDLIKQLH-CFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
W +MI H +A+ L+ EM K D T+ +VL+A + D +
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLAR-AGC--LKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
+ K G ++D ++ GC + ++E + + PD V+W T+I +
Sbjct: 264 GKLIKA-GFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYSM 321
Query: 386 HED-TERAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPG 443
+E+ +E A + +Q +G D S++ ++ +++ S ++ L K +
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHI----P 377
Query: 444 SSRIEVDGALHEFVMGDYNHPEADNIFVKLDEM 476
S+RI V+ AL N +A +F ++ E+
Sbjct: 378 SNRISVNNALISLYYKSGNLQDARWVFDRMPEL 410
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 200/579 (34%), Positives = 300/579 (51%), Gaps = 27/579 (4%)
Query: 12 LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
LH LKLG +++ N + ++ L ++N AR L N + +++ Y+
Sbjct: 51 LHTLTLKLGFASDTFTVNH-LVISYVKLK---EINTARKLFDEMCEPNVVSWTSVISGYN 106
Query: 72 LSSDPTHHFHALSLFIFMLR-RPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
P + ALS+F M RP VP P+ +TF V K C+ L +R GK +H +
Sbjct: 107 DMGKPQN---ALSMFQKMHEDRP---VP-PNEYTFASVFKACSALAESRIGKNIHARLEI 159
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD--RDVVSWTSLIDGLVDHDRPVEAI 188
G + + ++L+ MY D+ AR +FD M R+VVSWTS+I + R EAI
Sbjct: 160 SGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAI 219
Query: 189 ELFGRMLEAGV---EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
ELF R A + N + SV+ AC+ G L G+ HG+V + E V+T+L
Sbjct: 220 ELF-RSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVT-RGGYESNTVVATSL 277
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
+DMYAK G + A +T+MI A HGL + A+ LF EM + P+
Sbjct: 278 LDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNY 337
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
T+ VL AC ++ LV E S M ++YG+ P +H+ CVVD+L R G + EA +
Sbjct: 338 VTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAK 397
Query: 366 AMPMKPD--AVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
+ + + A+LW L+ A ++H E K+ ++ + +YI SN YA G W
Sbjct: 398 TIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGW 457
Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
+ +R M + G +K S IE +++ F GD + E+ I L ++ ++K+
Sbjct: 458 EDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKER 517
Query: 484 GYN------PKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCE 537
G+ S V +++D+E K + H E+LALAYGL+ GS IRI+ NLR C
Sbjct: 518 GHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCR 577
Query: 538 DCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
DCHE KLIS+I +R+I+VRD RFH FKNG C+C+DYW
Sbjct: 578 DCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/533 (32%), Positives = 285/533 (53%), Gaps = 12/533 (2%)
Query: 48 ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
AR L P N Y Y +++ + + ++ A LF M + + TF
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFV---NFGNYVEAFELFKMMWEE----LSDCETHTFAV 229
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L+ A L GKQLH K+G + ++ LI MYS GD+ AR F+ MP++
Sbjct: 230 MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKT 289
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
V+W ++I G H EA+ L M ++GV ++ T+ ++R L + ++ H
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+ + E + +TAL+D Y+K G +++A W A++ G A+HG
Sbjct: 350 SLI-RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGT 408
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
+A+ LF +M NV P+ T AVLSAC + L + + +F M + +GI+P H+ C+
Sbjct: 409 DAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACM 468
Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
++LL R G L EA F+ P+K +W L+ AC++ E+ E + ++ MG +
Sbjct: 469 IELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKL 528
Query: 408 GSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD----YNH 463
G+Y++ N+Y S+GK + A V E + KGL P + +EV H F+ GD YN
Sbjct: 529 GNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNE 588
Query: 464 PEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQ 523
I+ K+DE+++++ + GY+ + +L ++D++E+ +HSEKLA+AYGL+ T +
Sbjct: 589 TVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPE 648
Query: 524 GSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+ ++I +N R C++CH+ ++ IS + R+++VRD RFHHFK G CSC YW
Sbjct: 649 WNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 9/313 (2%)
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
T+ +++ C RLK R K+++GF+ GF + Y+MN ++ M+ G + AR LFD +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
P+R++ S+ S+I G V+ VEA ELF M E + T +LRA A G++ +G+
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
++H + K + VS LIDMY+K G IE A W +I+G A H
Sbjct: 245 QLH-VCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVL---SACRNADLVREAYMVFSDMKKRYGIEPT 340
G +EA+ L +M V D+ T++ ++ + +L ++A+ R G E
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLI----RNGFESE 359
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
I +VD ++ G + A + +P K + + W L+ H A +L ++ +
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRK-NIISWNALMGGYANHGRGTDAVKLFEKMI 418
Query: 401 EMGVDDSGSYILA 413
V + LA
Sbjct: 419 AANVAPNHVTFLA 431
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/538 (31%), Positives = 278/538 (51%), Gaps = 12/538 (2%)
Query: 40 SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
S G+++YA + N +N M+ Y+ + T F F +G+
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF-----LCFQKMSEQNGLQ- 331
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD T +L A L +G+ +HG+ + GF + ALI MY G L A +
Sbjct: 332 PDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVI 387
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
FDRM +++V+SW S+I V + + A+ELF + ++ + + T+ S+L A A+S +L
Sbjct: 388 FDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSL 447
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
S GR++H + K R + +L+ MYA G +E A W ++I
Sbjct: 448 SEGREIHAYIV-KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 506
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
A HG + ++ LF EM V P++ T ++L+AC + +V E + F MK+ YGI+P
Sbjct: 507 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDP 566
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
I+H+GC++DL+ R G A+ F+ MP P A +W +L+ A + H+D AE +Q
Sbjct: 567 GIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQI 626
Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
+M D++G Y+L N+YA G+W + ++ LM KG+ + S +E G H F G
Sbjct: 627 FKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNG 686
Query: 460 DYNHPEADNIFVKLDEMVDKLKKEG-YNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGL 518
D +H + I+ LD + + +E Y +S + E + ++ HS +LA +GL
Sbjct: 687 DRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGL 746
Query: 519 IRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
I T G ++ + N R C CHEF++ S++ +R+I+V D FHHF NG CSC +YW
Sbjct: 747 ISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 158/330 (47%), Gaps = 24/330 (7%)
Query: 59 NSYYYNTMLRAYSLSSDPTHHFHALSLFI----FMLRRPTHGVPAPDNFTFPFVLKCCAR 114
+++ +N M++ F + L+I F R GV A D FT+PFV+K A
Sbjct: 94 DAFLWNVMIKG----------FTSCGLYIEAVQFYSRMVFAGVKA-DTFTYPFVIKSVAG 142
Query: 115 LKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSL 174
+ +GK++H + K+GF SD Y+ N+LI +Y G A ++F+ MP+RD+VSW S+
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
I G + ++ LF ML+ G + + + +S L AC+ + MG+++H + R
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH-CHAVRSR 261
Query: 235 IEC-KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
IE V T+++DMY+K G + A W MI A +G +A F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 294 LEMETCN-VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
+M N ++PD T +L A + E + +R G P + ++D+
Sbjct: 322 QKMSEQNGLQPDVITSINLLP----ASAILEGRTIHGYAMRR-GFLPHMVLETALIDMYG 376
Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
G LK AE + M K + + W ++I A
Sbjct: 377 ECGQLKSAEVIFDRMAEK-NVISWNSIIAA 405
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 182/391 (46%), Gaps = 30/391 (7%)
Query: 3 VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
++++ E ++HA ++KLG ++ N S + + L + D A + P +
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCN-SLISLYMKLGCAWD---AEKVFEEMPERDIVS 198
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N+M+ Y D F +L LF ML+ PD F+ L C+ + + GK
Sbjct: 199 WNSMISGYLALGDG---FSSLMLFKEMLKCGFK----PDRFSTMSALGACSHVYSPKMGK 251
Query: 123 QLHGFITKMGFGS-DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
++H + + D +M +++ MYS +G++ A +F+ M R++V+W +I +
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 182 DRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
R +A F +M E G++ + T +++L A A+ GR +HG + +
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLP-HMV 366
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
+ TALIDMY + G ++SA W ++I+ +G A++LF E+ +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 301 VKPDERTMTAVLSACRNADLVRE-----AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
+ PD T+ ++L A + + E AY+V K RY I +V + A G
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIV----KSRYWSNTII--LNSLVHMYAMCG 480
Query: 356 CLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
L++A N + +K D V W ++I A VH
Sbjct: 481 DLEDARKCFNHILLK-DVVSWNSIIMAYAVH 510
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 2/225 (0%)
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
A +LFD M D W +I G +EA++ + RM+ AGV+ + T V+++ A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
+L G+K+H +V + + V +LI +Y K GC A W +
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVS-DVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
MISG + G ++ LF EM C KPD + + L AC + + + +
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ ++D+ ++ G + AE N M ++ + V W +I
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMI 305
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 249/453 (54%), Gaps = 5/453 (1%)
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDR 183
+ K G D N+L Y+ G A ++ +M ++ +VVSWT++ G +
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
A+++F +M E GV N AT+ ++L+ L G++VHG K I C V+T
Sbjct: 377 FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI-CDAYVAT 435
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
AL+DMY KSG ++SA W M+ G A G +E I F M ++P
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
D T T+VLS C+N+ LV+E + F M+ RYGI PTI+H C+VDLL R+G L EA DF
Sbjct: 496 DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 555
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
+ M +KPDA +W + +CK+H D E AE K+ + +S +Y++ N+Y+++ +W
Sbjct: 556 IQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRW 615
Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
+ +R LM + S I++D +H F HP+ +I+ +L ++V ++KK
Sbjct: 616 EDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKS 675
Query: 484 GYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFM 543
GY P S + +I D EK L+ H+EKLA+ YGLI+ + IR+VKN C D H
Sbjct: 676 GYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVA 735
Query: 544 KLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
K +S + R+I++++ R HHF++G CSC D W
Sbjct: 736 KYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 177/396 (44%), Gaps = 53/396 (13%)
Query: 9 ALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
L +H ++K G N+D R S F S L +A L P + +N ++
Sbjct: 6 GLTIHGGLIKRGLDNSDT-RVVSASMGFYGRCVS--LGFANKLFDEMPKRDDLAWNEIVM 62
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
S + A+ LF M G A D+ T +L+ C+ + +G+Q+HG++
Sbjct: 63 VNLRSGNWEK---AVELFREM---QFSGAKAYDS-TMVKLLQVCSNKEGFAEGRQIHGYV 115
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR---------------------- 166
++G S+ + N+LI MYS G L ++R++F+ M DR
Sbjct: 116 LRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAI 175
Query: 167 -------------DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
D+V+W SL+ G +AI + RM AG++ + +++ S+L+A
Sbjct: 176 GLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
A+ G L +G+ +HG + + ++ V T LIDMY K+G + A W
Sbjct: 236 AEPGHLKLGKAIHGYIL-RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAW 294
Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
+++SGL+ L K+A L + ME +KPD T ++ S +A V MK+
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
+ G+ P + + + +GC K +F NA+ +
Sbjct: 355 K-GVAPNVVSWTAIF-----SGCSKNG-NFRNALKV 383
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/499 (36%), Positives = 261/499 (52%), Gaps = 53/499 (10%)
Query: 12 LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY- 70
+HA+I++ + DA F +L + S D Y SNP N Y Y M+ +
Sbjct: 48 IHAKIIRT-FHDQDAFVVF-ELIRVCSTLDSVDYAYDVFSYVSNP--NVYLYTAMIDGFV 103
Query: 71 --SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
S+D +H R H PDN+ VLK C LK+ R+ +H +
Sbjct: 104 SSGRSADGVSLYH----------RMIHNSVLPDNYVITSVLKACD-LKVCRE---IHAQV 149
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD--------------------- 167
K+GFGS + ++ +Y G+L A+++FD MPDRD
Sbjct: 150 LKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEAL 209
Query: 168 ----------VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
V WT++IDGLV + +A+ELF M V N+ T V VL AC+D G
Sbjct: 210 ELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLG 269
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
AL +GR VH V E +R+E V ALI+MY++ G I A + MI
Sbjct: 270 ALELGRWVHSFV-ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMI 328
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
SGLA HG EAI+ F +M +P++ T+ A+L+AC + L+ VF+ MK+ + +
Sbjct: 329 SGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNV 388
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
EP I+H+GC+VDLL R G L+EA F+ +P++PD ++ TL+ ACK+H + E E++ K
Sbjct: 389 EPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAK 448
Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFV 457
+ E DSG+Y+L SN+YAS GKW E+RE M G+ K PG S IEVD +HEF+
Sbjct: 449 RLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFL 508
Query: 458 MGDYNHPEADNIFVKLDEM 476
+GD HP + I+ +L E+
Sbjct: 509 VGDIAHPHKEAIYQRLQEL 527
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/505 (36%), Positives = 268/505 (53%), Gaps = 42/505 (8%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
+ +TM E Q+HA ++K G ++ S++ F SPS D+NYA L+ T N +
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTA--SRVLAFCCASPS-DMNYAYLVFTRINHKNPF 90
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFML-RRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+NT++R +S SS P A+S+FI ML P+ P T+P V K RL AR
Sbjct: 91 VWNTIIRGFSRSSFPEM---AISIFIDMLCSSPS---VKPQRLTYPSVFKAYGRLGQARD 144
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSV----------------------------FGD 152
G+QLHG + K G D +I N ++HMY F
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 153 LGV---ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
G+ A+ LFD MP R+ VSW S+I G V + R +A+++F M E V+ + T+VS+
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX 269
L ACA GA GR +H + + R E V TALIDMY K GCIE
Sbjct: 265 LNACAYLGASEQGRWIHEYIV-RNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFS 329
W +MI GLA++G + A+DLF E+E ++PD + VL+AC ++ V A F
Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383
Query: 330 DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDT 389
MK++Y IEP+I+H+ +V++L AG L+EAE + MP++ D V+W +L+ AC+ +
Sbjct: 384 LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV 443
Query: 390 ERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
E A+R K ++ D++ Y+L SN YAS G + E R LM ++ + K G S IEV
Sbjct: 444 EMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEV 503
Query: 450 DGALHEFVMGDYNHPEADNIFVKLD 474
D +HEF+ HP++ I+ LD
Sbjct: 504 DFEVHEFISCGGTHPKSAEIYSLLD 528
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 271/506 (53%), Gaps = 45/506 (8%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
+ +MSE ++H ++ LG S + S+ +F+ALS SGD++YA L+ +Y
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEP--FVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNY 74
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+N ++R +S S +P ++S++I MLR PD+ T+PF++K +RL + G
Sbjct: 75 GWNFVIRGFSNSRNPEK---SISVYIQMLRFGL----LPDHMTYPFLMKSSSRLSNRKLG 127
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP----------------- 164
LH + K G D +I N LIHMY F D AR+LFD MP
Sbjct: 128 GSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKS 187
Query: 165 --------------DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV-EVNDATVVSV 209
+RDVV+W+S+IDG V +A+E+F +M+ G + N+ T+VSV
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX--XXXXXX 267
+ ACA GAL+ G+ VH + + + + T+LIDMYAK G I A
Sbjct: 248 ICACAHLGALNRGKTVHRYILDV-HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
W A+I GLASHG +E++ LF +M + PDE T +L+AC + LV+EA+
Sbjct: 307 TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHF 366
Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
F +K+ G EP +H+ C+VD+L+RAG +K+A DF++ MP+KP + L+ C H
Sbjct: 367 FKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
+ E AE + K+ +E+ + G Y+ +NVYA ++ +RE M KKG+ K G S +
Sbjct: 426 NLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSIL 485
Query: 448 EVDGALHEFVMGDYNHPEADNIFVKL 473
++DG H F+ D H +D I+ L
Sbjct: 486 DLDGTRHRFIAHDKTHFHSDKIYAVL 511
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 259/477 (54%), Gaps = 8/477 (1%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD T VL CA L G +LH K S + N LI+MYS + A ++
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F +P ++V+SWTS+I GL ++R EA+ +F R ++ ++ N T+ + L ACA GAL
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
G+++H V + + + AL+DMY + G + +A W +++G
Sbjct: 515 MCGKEIHAHVL-RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTS-WNILLTG 572
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
+ G ++LF M V+PDE T ++L C + +VR+ M FS M+ YG+ P
Sbjct: 573 YSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTP 631
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
++H+ CVVDLL RAG L+EA F+ MP+ PD +W L+ AC++H + E +
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHI 691
Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
E+ G YIL N+YA GKW A+VR +M + GL G S +EV G +H F+
Sbjct: 692 FELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSD 751
Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLH--HSEKLALAYG 517
D HP+ I L+ +K+ + G K+SE +D+ E + + HSE+ A+A+G
Sbjct: 752 DKYHPQTKEINTVLEGFYEKMSEVGLT-KISES-SSMDETEISRDEIFCGHSERKAIAFG 809
Query: 518 LIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKD 574
LI T G I + KNL CE+CH+ +K ISK +R+I VRD FHHFK+G+CSC D
Sbjct: 810 LINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 171/357 (47%), Gaps = 11/357 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G+L A + N + +N ++ Y+ + A+ L+ ML G PD
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYA---KQGYFDEAMCLYHRMLWV---GGVKPDV 196
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+TFP VL+ C + +GK++H + + G+ D ++NALI MY GD+ AR LFDR
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
MP RD++SW ++I G ++ E +ELF M V+ + T+ SV+ AC G +G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
R +H V +V +L MY +G A WT MISG
Sbjct: 317 RDIHAYVITTG-FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTI 341
+ L +AID + M+ +VKPDE T+ AVLSAC DL + +K R +
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
+ ++++ ++ C+ +A D + +P K + + W ++I +++ A ++Q
Sbjct: 436 AN--NLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEALIFLRQ 489
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 127/263 (48%), Gaps = 11/263 (4%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA-PD 101
GD+ ARLL P + +N M+ Y + H L LF M G+ PD
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGY-FENGMCH--EGLELFFAM-----RGLSVDPD 296
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
T V+ C L R G+ +H ++ GF D + N+L MY G A +LF
Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
RM +D+VSWT++I G + P +AI+ + M + V+ ++ TV +VL ACA G L
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
G ++H + K R+ V+ LI+MY+K CI+ A WT++I+GL
Sbjct: 417 GVELHKLAI-KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 282 SHGLCKEAIDLFLEMETCNVKPD 304
+ C EA+ +FL ++P+
Sbjct: 476 LNNRCFEAL-IFLRQMKMTLQPN 497
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 14/288 (4%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
A D F +++ C + +G +++ + NA + M+ FG+L A
Sbjct: 91 AVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWY 150
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE-AGVEVNDATVVSVLRACADSG 217
+F +M +R++ SW L+ G EA+ L+ RML GV+ + T VLR C
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
L+ G++VH V + E +V ALI MY K G ++SA W AMI
Sbjct: 211 DLARGKEVHVHVV-RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMI 269
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVRE--AYMVFSDMK 332
SG +G+C E ++LF M +V PD T+T+V+SAC + L R+ AY++ +
Sbjct: 270 SGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT--- 326
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
G I + + AG +EAE + M K D V W T+I
Sbjct: 327 ---GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK-DIVSWTTMI 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 6/208 (2%)
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
+ GL + + EA++L M E V V++ V+++R C A G KV+ I
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 235 IECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFL 294
+ A + M+ + G + A W ++ G A G EA+ L+
Sbjct: 126 -SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 295 EM-ETCNVKPDERTMTAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
M VKPD T VL C DL R + + RYG E I ++ +
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVV--RYGYELDIDVVNALITMYV 242
Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ G +K A + MP + D + W +I
Sbjct: 243 KCGDVKSARLLFDRMP-RRDIISWNAMI 269
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 270/482 (56%), Gaps = 20/482 (4%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
+++ LQ+H QI L + ND+ S+L ++LS + DL +AR LL + +
Sbjct: 24 SSIKHLLQIHGQI-HLSSLQNDS-FIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTW 81
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
N + R YS S P ++ ++ M RR G+ P+ TFPF+LK CA G+Q
Sbjct: 82 NMLSRGYSSSDSPVE---SIWVYSEMKRR---GIK-PNKLTFPFLLKACASFLGLTAGRQ 134
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+ + K GF D Y+ N LIH+Y AR++FD M +R+VVSW S++ LV++ +
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
E F M+ ++ T+V +L AC G LS+G+ VH V ++ +E C + T
Sbjct: 195 LNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRE-LELNCRLGT 251
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVK 302
AL+DMYAKSG +E A W+AMI GLA +G +EA+ LF +M + +V+
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
P+ T VL AC + LV + Y F +M+K + I+P + H+G +VD+L RAG L EA D
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTER---AERLMKQHLEMGVDDSGSYILASNVYAS 419
F+ MP +PDAV+WRTL+ AC +H D + E++ K+ +E+ SG+ ++ +N +A
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAE 431
Query: 420 VGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDK 479
W+ AEVR +M + + K G S +E+ G+ H F G Y+ P ++ +V + E++D
Sbjct: 432 ARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG-YD-PRSE--YVSIYELLDL 487
Query: 480 LK 481
K
Sbjct: 488 FK 489
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 243/471 (51%), Gaps = 41/471 (8%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
+L+YAR + N++ Y +L AYS SS P H A S F M+ R VP P++F
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYS-SSLPLHASSAFSFFRLMVNR---SVPRPNHF 127
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY-SVFGDLGVARELFDR 162
+P VLK L A +H + K GF + AL+H Y S + +AR+LFD
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDE 187
Query: 163 MPDRDVVSWTSLIDG----------------LVDHDRP---------------VEAIELF 191
M +R+VVSWT+++ G + + D P +EA+ LF
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLF 247
Query: 192 GRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
RM+ E + N+ TVV VL ACA +G L + + +H ++ + VS +L+D+Y
Sbjct: 248 RRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAY-RRDLSSDVFVSNSLVDLYG 306
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV---KPDERT 307
K G +E A W +MI+ A HG +EAI +F EM N+ KPD T
Sbjct: 307 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT 366
Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
+L+AC + LV + F M R+GIEP I+H+GC++DLL RAG EA + M+ M
Sbjct: 367 FIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
MK D +W +L+ ACK+H + AE +K + + ++ G + +N+Y +G W
Sbjct: 427 KMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEAR 486
Query: 428 EVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVD 478
R+++ + KPPG SRIE+D +H+F D +HPE + I++ LD ++
Sbjct: 487 RARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 271/524 (51%), Gaps = 14/524 (2%)
Query: 59 NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
N+ YN ++ + + H AL LF ML+R GV D F+ + C +
Sbjct: 381 NTITYNALMAGFCRNG---HGLKALKLFTDMLQR---GVELTD-FSLTSAVDACGLVSEK 433
Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR--DVVSWTSLID 176
+ +Q+HGF K G + I AL+ M + + A E+FD+ P + TS+I
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIG 493
Query: 177 GLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
G + P +A+ LF R L E + +++ ++ +L C G MG ++H +
Sbjct: 494 GYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYF 553
Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
++ +LI MYAK + A W ++IS EA+ L+
Sbjct: 554 S-DISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSR 612
Query: 296 METCNVKPDERTMTAVLSACR--NADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLAR 353
M +KPD T+T V+SA R ++ + +F MK Y IEPT +H+ V +L
Sbjct: 613 MNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGH 672
Query: 354 AGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
G L+EAED +N+MP++P+ + R L+ +C++H +T A+R+ K L + YIL
Sbjct: 673 WGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILK 732
Query: 414 SNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKL 473
SN+Y++ G W +RE M ++G K P S I + +H F D +HP+ +I+ L
Sbjct: 733 SNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGL 792
Query: 474 DEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRT-SQGSKIRIVKN 532
+ ++ + K GY P VL E+D+ K + L HHS KLA+ YG++ + ++G +R++KN
Sbjct: 793 EILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKN 852
Query: 533 LRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+ C DCHEF K IS + +R+I++RD FHHF NG CSC+D W
Sbjct: 853 VMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 136/274 (49%), Gaps = 18/274 (6%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
AL +F F +R+ G+ P+ +TF +L C R+ G Q+HG I K GF + ++ N
Sbjct: 164 ALKVF-FRMRKA--GLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSN 220
Query: 142 ALIHMYSVFGDLGVA----RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
+L+ +Y D G + +LFD +P RDV SW +++ LV + +A +LF M
Sbjct: 221 SLMSLYD--KDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 198 -GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIE 256
G V+ T+ ++L +C DS L GR++HG ++ + +V+ ALI Y+K ++
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ-ELSVNNALIGFYSKFWDMK 337
Query: 257 SAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-C 315
+T MI+ S G+ A+++F + N T A+++ C
Sbjct: 338 KVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTI----TYNALMAGFC 393
Query: 316 RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVD 349
RN ++ A +F+DM +R G+E T VD
Sbjct: 394 RNGHGLK-ALKLFTDMLQR-GVELTDFSLTSAVD 425
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 167/415 (40%), Gaps = 47/415 (11%)
Query: 1 MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
+ V+ S +Q+H I+K G N+ N L + + L P +
Sbjct: 192 VRVSRFSLGIQIHGLIVKSGFLNSVFVSN--SLMSLYDKDSGSSCDDVLKLFDEIPQRDV 249
Query: 61 YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+NT++ SL + H A LF M R GV D+FT +L C + +
Sbjct: 250 ASWNTVVS--SLVKEGKSH-KAFDLFYEMNRVEGFGV---DSFTLSTLLSSCTDSSVLLR 303
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID---- 176
G++LHG ++G + + NALI YS F D+ L++ M +D V++T +I
Sbjct: 304 GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMS 363
Query: 177 -GLVD--------------------------HDRPVEAIELFGRMLEAGVEVNDATVVSV 209
G+VD + ++A++LF ML+ GVE+ D ++ S
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSA 423
Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX--XXX 267
+ AC + ++HG + C + TAL+DM + + A
Sbjct: 424 VDACGLVSEKKVSEQIHGFCIKFGTAFNPC-IQTALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK--PDERTMTAVLSACRNADLVREAY 325
T++I G A +GL +A+ LF C K DE ++T +L+ C Y
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLF-HRTLCEQKLFLDEVSLTLILAVCGTLGFREMGY 541
Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ K G I ++ + A+ +A N M + D + W +LI
Sbjct: 542 QIHCYALKA-GYFSDISLGNSLISMYAKCCDSDDAIKIFNTM-REHDVISWNSLI 594
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 22/289 (7%)
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE---LFD 161
F ++L+ A+ K +H K+ + NALI S + LG RE +F
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALI---STYLKLGFPREAILVFV 138
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-VEVNDATVVSVLRACADSGALS 220
+ VVS+T+LI G + +EA+++F RM +AG V+ N+ T V++L AC S
Sbjct: 139 SLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFS 198
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAK---SGCIESAXXXXXXXXXXXXXXWTAMI 277
+G ++HG++ + + VS +L+ +Y K S C + W ++
Sbjct: 199 LGIQIHGLIVKSGFLN-SVFVSNSLMSLYDKDSGSSC-DDVLKLFDEIPQRDVASWNTVV 256
Query: 278 SGLASHGLCKEAIDLFLEMETC-NVKPDERTMTAVLSACRNADLV---REAYMVFSDMKK 333
S L G +A DLF EM D T++ +LS+C ++ ++ RE +
Sbjct: 257 SSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELH----GRAI 312
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
R G+ + ++ ++ +K+ E M M DAV + +I A
Sbjct: 313 RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM-MAQDAVTFTEMITA 360
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 248/463 (53%), Gaps = 42/463 (9%)
Query: 44 DLNYARLLL--TSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
D++YA L SNP N + YN+++RAY+ +S + + ++ +LR+ PD
Sbjct: 57 DMDYATRLFNQVSNP--NVFLYNSIIRAYTHNS---LYCDVIRIYKQLLRK---SFELPD 108
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
FTFPF+ K CA L GKQ+HG + K G NALI MY F DL A ++FD
Sbjct: 109 RFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFD 168
Query: 162 RMPDRDVVSWTSLIDGLVDHDRP-------------------------------VEAIEL 190
M +RDV+SW SL+ G + VEA++
Sbjct: 169 EMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDF 228
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
F M AG+E ++ +++SVL +CA G+L +G+ +H + E++ + V ALI+MY+
Sbjct: 229 FREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH-LYAERRGFLKQTGVCNALIEMYS 287
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
K G I A W+ MISG A HG AI+ F EM+ VKP+ T
Sbjct: 288 KCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLG 347
Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
+LSAC + + +E F M++ Y IEP I+H+GC++D+LARAG L+ A + MPMK
Sbjct: 348 LLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK 407
Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVR 430
PD+ +W +L+ +C+ + + A M +E+ +D G+Y+L +N+YA +GKW + + +R
Sbjct: 408 PDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLR 467
Query: 431 ELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKL 473
+++ + + K PG S IEV+ + EFV GD + P I + L
Sbjct: 468 KMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVL 510
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 154/379 (40%), Gaps = 38/379 (10%)
Query: 95 HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
HG+ +N+ PF+ R+K + K+++ I G +++ ++ D+
Sbjct: 4 HGIREVENYFIPFL----QRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMD 59
Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA-TVVSVLRAC 213
A LF+++ + +V + S+I + + I ++ ++L E+ D T + ++C
Sbjct: 60 YATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSC 119
Query: 214 ADSGALSMGRKVHG----------IVKEKKRIECKCNVS--------------------T 243
A G+ +G++VHG +V E I+
Sbjct: 120 ASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWN 179
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
+L+ YA+ G ++ A WTAMISG G EA+D F EM+ ++P
Sbjct: 180 SLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEP 239
Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
DE ++ +VL +C + + ++R G ++++ ++ G + +A
Sbjct: 240 DEISLISVLPSCAQLGSLELGKWIHLYAERR-GFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG-SYILASNVYASVGK 422
M K D + W T+I H + A + V +G +++ + + VG
Sbjct: 299 FGQMEGK-DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 423 WSNKAEVRELMNKKGLIKP 441
W ++M + I+P
Sbjct: 358 WQEGLRYFDMMRQDYQIEP 376
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 276/520 (53%), Gaps = 45/520 (8%)
Query: 11 QLHAQILKLGTSNNDAPRN-FSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
+LH ++K G +N +N K+++ L ++ AR + + + +N M+
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGL-----MDMARGVFDRRCKEDVFSWNLMISG 210
Query: 70 YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
Y+ + + ++ L + M R + +P + T VL C+++K K++H +++
Sbjct: 211 YNRMKE---YEESIELLVEMER----NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 130 KMGFGSDCYIMNALIHMYS----------VF---------------------GDLGVARE 158
+ + NAL++ Y+ +F G+L +AR
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
FD+MP RD +SWT +IDG + E++E+F M AG+ ++ T+VSVL ACA G+
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
L +G + + +K +I+ V ALIDMY K GC E A WTAM+
Sbjct: 384 LEIGEWIKTYI-DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
GLA++G +EAI +F +M+ +++PD+ T VLSAC ++ +V +A F+ M+ + IE
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
P++ H+GC+VD+L RAG +KEA + + MPM P++++W L+ A ++H D AE K+
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKK 562
Query: 399 HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVM 458
LE+ D+ Y L N+YA +W + EVR + + K PG S IEV+G HEFV
Sbjct: 563 ILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVA 622
Query: 459 GDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDD 498
GD +H +++ I++KL+E+ + Y P SE+L E D
Sbjct: 623 GDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 191/435 (43%), Gaps = 50/435 (11%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
T + QLH+Q + G + N P KLF F G ++YA L P + +N
Sbjct: 46 TTDQFKQLHSQSITRGVAPN--PTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWN 103
Query: 65 TMLRAYS-LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ-GK 122
M++ +S + D + L++ ML+ GV PD+ TFPF+L R A GK
Sbjct: 104 NMIKGWSKVDCDG----EGVRLYLNMLK---EGV-TPDSHTFPFLLNGLKRDGGALACGK 155
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
+LH + K G GS+ Y+ NAL+ MYS+ G + +AR +FDR DV SW +I G
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
E+IEL M V T++ VL AC+ + ++VH V E K E +
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK-TEPSLRLE 274
Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK--------------- 287
AL++ YA G ++ A WT+++ G G K
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 288 ----------------EAIDLFLEMETCNVKPDERTMTAVLSACRNADL--VREAYMVFS 329
E++++F EM++ + PDE TM +VL+AC + + E +
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 330 DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDT 389
D K I+ + ++D+ + GC ++A+ + M + D W ++ +
Sbjct: 395 DKNK---IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVGLANNGQG 450
Query: 390 ERAERLMKQHLEMGV 404
+ A ++ Q +M +
Sbjct: 451 QEAIKVFFQMQDMSI 465
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 226/391 (57%), Gaps = 2/391 (0%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
+P+ T +L L + G++LHGFI K GF + C I A+I MY+ G + +A E
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
+F+R+ RD+VSW S+I D P AI++F +M +G+ + ++ + L ACA+ +
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
S G+ +HG + K + + LIDMYAK G +++A W ++I+
Sbjct: 558 ESFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 279 GLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
+HG K+++ LF EM E ++PD+ T ++S+C + V E F M + YGI
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
+P +H+ CVVDL RAG L EA + + +MP PDA +W TL+ AC++H++ E AE
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASS 736
Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFV 457
+ +++ +SG Y+L SN +A+ +W + +VR LM ++ + K PG S IE++ H FV
Sbjct: 737 KLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFV 796
Query: 458 MGDYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
GD NHPE+ +I+ L+ ++ +L+ EGY P+
Sbjct: 797 SGDVNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 183/394 (46%), Gaps = 16/394 (4%)
Query: 9 ALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
+QLH ++ G + +N + S G + A L ++ +N M+
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNS----LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
Y S +L+ F M+ + GV PD TF +L ++ + KQ+H +I
Sbjct: 314 GYVQSGLMEE---SLTFFYEMI---SSGV-LPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
+ D ++ +ALI Y + +A+ +F + DVV +T++I G + + ++++
Sbjct: 367 MRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSL 426
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
E+F +++ + N+ T+VS+L AL +GR++HG + KK + +CN+ A+IDM
Sbjct: 427 EMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFII-KKGFDNRCNIGCAVIDM 485
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
YAK G + A W +MI+ A AID+F +M + D ++
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 309 TAVLSACRNADLVREAY-MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
+A LSAC A+L E++ ++ + + ++D+ A+ G LK A + M
Sbjct: 546 SAALSAC--ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
K + V W ++I AC H + + L + +E
Sbjct: 604 KEK-NIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 139/312 (44%), Gaps = 18/312 (5%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
+P+ TF VL CA L G QLHG + G + I N+L+ MYS G A +
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
LF M D V+W +I G V E++ F M+ +GV + T S+L + +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
L +++H + + I +++ALID Y K + A +TAMIS
Sbjct: 356 LEYCKQIHCYIM-RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMIS 414
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC---RNADLVRE--AYMVFSDMKK 333
G +GL +++++F + + P+E T+ ++L L RE +++
Sbjct: 415 GYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDN 474
Query: 334 RYGIEPTIQHFGC-VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
R I GC V+D+ A+ G + A + + K D V W ++I C ++ A
Sbjct: 475 RCNI-------GCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAA 526
Query: 393 ERLMKQHLEMGV 404
+ +Q MGV
Sbjct: 527 IDIFRQ---MGV 535
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 5/234 (2%)
Query: 81 HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIM 140
AL+ + ML GV +PD TFP ++K C LK + L ++ +G + ++
Sbjct: 121 QALAFYFKML---CFGV-SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVA 176
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
++LI Y +G + V +LFDR+ +D V W +++G I+ F M +
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
N T VL CA + +G ++HG+V ++ + ++ +L+ MY+K G + A
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG-VDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
W MISG GL +E++ F EM + V PD T +++L +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 134/335 (40%), Gaps = 21/335 (6%)
Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
+L+ C+ L RQGKQ+H F+ D Y ++ MY++ G ++F R+ R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 167 --DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
+ W S+I V + +A+ + +ML GV + +T +++AC AL +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV---ALKNFKG 156
Query: 225 VHGIVKEKKRIECKCN--VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
+ + + CN V+++LI Y + G I+ W M++G A
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR-----EAYMVFSDMKKRYGI 337
G I F M + P+ T VLS C + L+ +V S + I
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
+ ++ + + ++ G +A M + D V W +I E +
Sbjct: 277 KNSL------LSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVREL 432
+ + GV I S++ SV K+ N +++
Sbjct: 330 EMISSGVLPDA--ITFSSLLPSVSKFENLEYCKQI 362
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 245/472 (51%), Gaps = 14/472 (2%)
Query: 7 SEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTM 66
S Q HA I+K G ++ RN + S SG ++A L + + M
Sbjct: 120 SNPFQFHAHIVKFGLDSDPFVRNS----LISGYSSSGLFDFASRLFDGAEDKDVVTWTAM 175
Query: 67 LRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHG 126
+ + + + A+ F+ M + GV A + T VLK +++ R G+ +HG
Sbjct: 176 IDGFVRNGSASE---AMVYFVEMKKT---GVAA-NEMTVVSVLKAAGKVEDVRFGRSVHG 228
Query: 127 FITKMG-FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
+ G D +I ++L+ MY A+++FD MP R+VV+WT+LI G V
Sbjct: 229 LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFD 288
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
+ + +F ML++ V N+ T+ SVL ACA GAL GR+VH + K IE T L
Sbjct: 289 KGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMI-KNSIEINTTAGTTL 347
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
ID+Y K GC+E A WTAMI+G A+HG ++A DLF M + +V P+E
Sbjct: 348 IDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNE 407
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
T AVLSAC + LV E +F MK R+ +EP H+ C+VDL R G L+EA+ +
Sbjct: 408 VTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIE 467
Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
MPM+P V+W L +C +H+D E + + +++ SG Y L +N+Y+ W
Sbjct: 468 RMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDE 527
Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHP-EADNIFVKLDEM 476
A VR+ M + ++K PG S IEV G L EF+ D P E+D+++ LD +
Sbjct: 528 VARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 241/442 (54%), Gaps = 12/442 (2%)
Query: 31 SKLFTFAALSPSGD--LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIF 88
SKL T P+ + +YA + S NS+ Y+TM+R S SS P H L F+
Sbjct: 47 SKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQP--HL-GLRYFLL 103
Query: 89 MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMG-FGSDCYIMNALIHMY 147
M++ + P TF F++ C + GKQ+H ++ K G F SD ++ ++ +Y
Sbjct: 104 MVKEEEEDI-TPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIY 162
Query: 148 SVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVV 207
L AR++FD +P DVV W L++G V E +E+F ML G+E ++ +V
Sbjct: 163 VEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVT 222
Query: 208 SVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
+ L ACA GAL+ G+ +H VK+K+ IE V TAL+DMYAK GCIE+A
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTR 282
Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCN-VKPDERTMTAVLSACRNADLVREAYM 326
W A+I G A++G K+A +E + +KPD + VL+AC + + E
Sbjct: 283 RNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRT 342
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+ +M+ RYGI P +H+ C+VDL+ RAG L +A D + MPMKP A +W L+ C+ H
Sbjct: 343 MLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
Query: 387 EDTERAERLMKQHLEMGV----DDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPP 442
++ E E ++ L++ ++ + + SN+Y SV + +VR ++ ++G+ K P
Sbjct: 403 KNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTP 462
Query: 443 GSSRIEVDGALHEFVMGDYNHP 464
G S +EVDG + +FV GD +HP
Sbjct: 463 GWSLLEVDGIVTKFVSGDVSHP 484
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 242/443 (54%), Gaps = 12/443 (2%)
Query: 30 FSKLFTFAALSPSGD--LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFI 87
SKL T P+ + +YA + S NS+ Y+TM+R S SS P H L F+
Sbjct: 46 ISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQP--HL-GLRYFL 102
Query: 88 FMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMG-FGSDCYIMNALIHM 146
M++ + AP TF F++ C + GKQ+H ++ K G F SD ++ ++ +
Sbjct: 103 LMVKEEEEDI-APSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRI 161
Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
Y L AR++FD +P DVV W L++G V E +E+F ML G+E ++ +V
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
+ L ACA GAL+ G+ +H VK+K IE V TAL+DMYAK GCIE+A
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN-VKPDERTMTAVLSACRNADLVREAY 325
W A+I G A++G K+A+ +E + +KPD + VL+AC + + E
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
+ +M+ RY I P +H+ C+VDL+ RAG L +A + + MPMKP A +W L+ C+
Sbjct: 342 SMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRT 401
Query: 386 HEDTERAERLMKQHLEMGV----DDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
H++ E E +K L++ ++ + + SN+Y SV + ++VR ++ ++G+ K
Sbjct: 402 HKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKT 461
Query: 442 PGSSRIEVDGALHEFVMGDYNHP 464
PG S +EVDG + +FV GD +HP
Sbjct: 462 PGWSVLEVDGNVTKFVSGDVSHP 484
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 230/425 (54%), Gaps = 5/425 (1%)
Query: 79 HFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCY 138
H L LF M R H P++ T+ L C+ + +G+Q+H + K G S+
Sbjct: 237 HEDGLRLFSLMRRGLVH----PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 139 IMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG 198
I +AL+ MYS G + A +F+ + D VS T ++ GL + EAI+ F RML+AG
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
VE++ V +VL +L +G+++H +V K++ V+ LI+MY+K G + +
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVI-KRKFSGNTFVNNGLINMYSKCGDLTDS 411
Query: 259 XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
W +MI+ A HG A+ L+ EM T VKP + T ++L AC +
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHV 471
Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
L+ + + ++MK+ +GIEP +H+ C++D+L RAG LKEA+ F++++P+KPD +W+
Sbjct: 472 GLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQA 531
Query: 379 LIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
L+ AC H DTE E +Q + D S ++IL +N+Y+S GKW +A+ + M G+
Sbjct: 532 LLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGV 591
Query: 439 IKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDD 498
K G S IE++ H FV+ D HP+A+ I+ L + + EGY P +L D
Sbjct: 592 TKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGD 651
Query: 499 EEKAT 503
+ T
Sbjct: 652 DRNGT 656
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 3/311 (0%)
Query: 88 FMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY 147
F+L + G D+ T VL C + K +H G+ + + N LI Y
Sbjct: 141 FVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSY 200
Query: 148 SVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVV 207
G R +FD M R+V++ T++I GL++++ + + LF M V N T +
Sbjct: 201 FKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYL 260
Query: 208 SVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
S L AC+ S + G+++H ++ K IE + + +AL+DMY+K G IE A
Sbjct: 261 SALAACSGSQRIVEGQQIHALLW-KYGIESELCIESALMDMYSKCGSIEDAWTIFESTTE 319
Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
T ++ GLA +G +EAI F+ M V+ D ++AVL + + +
Sbjct: 320 VDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL 379
Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
S + KR T + G ++++ ++ G L +++ MP K + V W ++I A H
Sbjct: 380 HSLVIKRKFSGNTFVNNG-LINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHG 437
Query: 388 DTERAERLMKQ 398
A +L ++
Sbjct: 438 HGLAALKLYEE 448
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 4/275 (1%)
Query: 139 IMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG 198
+ N+L+ +Y+ G L A +LFD MP RDV+S + G + + L RML +G
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
+ AT+ VL C + + +H + + + +V LI Y K GC S
Sbjct: 152 -GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGY-DKEISVGNKLITSYFKCGCSVSG 209
Query: 259 XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
TA+ISGL + L ++ + LF M V P+ T + L+AC +
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
+ E + + + K YGIE + ++D+ ++ G +++A + + D V
Sbjct: 270 QRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAWTIFES-TTEVDEVSMTV 327
Query: 379 LIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
++ + E A + + L+ GV+ + + A
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSA 362
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 230/411 (55%), Gaps = 18/411 (4%)
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR-QGK 122
N L+ Y S +P AL F R+ V D+F+ F +K + K + G+
Sbjct: 32 NHTLKQYLESGEP---IKALLDFRHRFRQSPSFV---DSFSVLFAIKVSSAQKASSLDGR 85
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDGLVDH 181
Q+H + K+GF + I +L+ YS GD+ AR++FD P++ ++V WT++I ++
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTEN 145
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCN 240
+ VEAIELF RM +E++ V L ACAD GA+ MG +++ +K K+R+
Sbjct: 146 ENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLT 205
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
+ +L++MY KSG E A +T+MI G A +G +E+++LF +M+T +
Sbjct: 206 LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTID 265
Query: 301 ------VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
+ P++ T VL AC ++ LV E F M Y ++P HFGC+VDL R+
Sbjct: 266 QSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRS 325
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS 414
G LK+A +F+N MP+KP+ V+WRTL+ AC +H + E E + ++ E+ D G Y+ S
Sbjct: 326 GHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALS 385
Query: 415 NVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPE 465
N+YAS G W K+++R+ + K+ + PG S IE+ ++EFV G N+ E
Sbjct: 386 NIYASKGMWDEKSKMRDRVRKR---RMPGKSWIELGSIINEFVSGPDNNDE 433
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 252/493 (51%), Gaps = 74/493 (15%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPS-GDLNYARLLLTSNPALNSYYY 63
+++E Q HA +LK G ++ + SKL FAA +P ++YA +L + N + +
Sbjct: 51 SLTEIQQAHAFMLKTGLFHDTF--SASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTH 108
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
N+++RAY+ SS P AL++F ML P PD ++F FVLK CA +G+Q
Sbjct: 109 NSVIRAYANSSTPEV---ALTVFREMLLGPVF----PDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTS---------L 174
+HG K G +D ++ N L+++Y G +AR++ DRMP RD VSW S L
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 175 ID---------------------------GLVDHDRPV---------------------- 185
+D GLV + V
Sbjct: 222 VDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV 281
Query: 186 ----EAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
E +E+F +ML+ E D T+VSVL ACA G+LS G VH + +K IE +
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH-VYIDKHGIEIEGF 340
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
++TAL+DMY+K G I+ A W ++IS L+ HGL K+A+++F EM
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG 400
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
KP+ T VLSAC + ++ +A +F M Y +EPTI+H+GC+VDLL R G ++EA
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEA 460
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
E+ +N +P ++L +L+ ACK E+AER+ + LE+ + DS Y SN+YAS
Sbjct: 461 EELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASD 520
Query: 421 GKWSNKAEVRELM 433
G+W + R M
Sbjct: 521 GRWEKVIDGRRNM 533
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 253/519 (48%), Gaps = 56/519 (10%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALNSY 61
M++ +Q+H+ I K +P S ++ +AL S G++N A+ + N
Sbjct: 168 MNKGVQVHSLIAK-------SPF-LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+N+++ + + AL +F ML PD T V+ CA L + G
Sbjct: 220 SWNSLITCFEQNGPAVE---ALDVFQMMLESRVE----PDEVTLASVISACASLSAIKVG 272
Query: 122 KQLHGFITKMG-FGSDCYIMNALIHMYSVFGDLGVARELFDRMP---------------- 164
+++HG + K +D + NA + MY+ + AR +FD MP
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 165 ---------------DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
+R+VVSW +LI G + EA+ LF + V + ++
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 392
Query: 210 LRACADSGALSMGRKVHGIV-----KEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
L+ACAD L +G + H V K + E V +LIDMY K GC+E
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREA 324
W AMI G A +G EA++LF EM KPD TM VLSAC +A V E
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 325 YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACK 384
FS M + +G+ P H+ C+VDLL RAG L+EA+ + MPM+PD+V+W +L+ ACK
Sbjct: 513 RHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACK 572
Query: 385 VHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGS 444
VH + + + ++ LE+ +SG Y+L SN+YA +GKW + VR+ M K+G+ K PG
Sbjct: 573 VHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGC 632
Query: 445 SRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
S I++ G H F++ D +HP I LD ++ +++ E
Sbjct: 633 SWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 180/404 (44%), Gaps = 48/404 (11%)
Query: 38 ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
L+ G L+ A L S P + +N+M+ ++ AL F M +
Sbjct: 95 GLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE---ALCYFAMMHKEGF--- 148
Query: 98 PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
+ ++F VL C+ L +G Q+H I K F SD YI +AL+ MYS G++ A+
Sbjct: 149 -VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQ 207
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
+FD M DR+VVSW SLI + VEA+++F MLE+ VE ++ T+ SV+ ACA
Sbjct: 208 RVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLS 267
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK-------------------------- 251
A+ +G++VHG V + ++ +S A +DMYAK
Sbjct: 268 AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMI 327
Query: 252 -----SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
+ ++A W A+I+G +G +EA+ LF ++ +V P
Sbjct: 328 SGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHY 387
Query: 307 TMTAVLSACRNADLVR-------EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
+ +L AC ADL +++ K + G E I ++D+ + GC++E
Sbjct: 388 SFANILKAC--ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
M M+ D V W +I + A L ++ LE G
Sbjct: 446 GYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALELFREMLESG 488
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 35/328 (10%)
Query: 101 DNFTFPFVLKCCARLKL-ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
D+ F +L C + KL A + +H + K GF ++ +I N LI YS G L R++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 160 FDRMPDRDVVSWTSLIDGLV-------------------------------DHDRPVEAI 188
FD+MP R++ +W S++ GL HDR EA+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
F M + G +N+ + SVL AC+ ++ G +VH ++ K + +AL+DM
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA-KSPFLSDVYIGSALVDM 196
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
Y+K G + A W ++I+ +G EA+D+F M V+PDE T+
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
+V+SAC + ++ V + K + I VD+ A+ +KEA ++MP
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLM 396
++ V+ T + + + +A RLM
Sbjct: 317 IRN--VIAETSMISGYAMAASTKAARLM 342
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 231/439 (52%), Gaps = 7/439 (1%)
Query: 40 SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHF--HALSLFIFMLRRPTHGV 97
+ +G L A L + P+ N YN M+ + + T A LF+ M RR
Sbjct: 298 AKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE-- 355
Query: 98 PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
P+P TF VLK C+ K G+Q+H I K F SD +I +ALI +Y++ G
Sbjct: 356 PSPS--TFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
+ F +D+ SWTS+ID V +++ A +LF ++ + + + TV ++ ACAD
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
ALS G ++ G K I+ +V T+ I MYAKSG + A ++AMI
Sbjct: 474 ALSSGEQIQGYAI-KSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMI 532
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
S LA HG EA+++F M+T +KP+++ VL AC + LV + F MK Y I
Sbjct: 533 SSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRI 592
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
P +HF C+VDLL R G L +AE+ + + + V WR L+ +C+V++D+ +R+ +
Sbjct: 593 NPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAE 652
Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFV 457
+ +E+ + SGSY+L N+Y G S+ EVRELM +G+ K P S I + H F
Sbjct: 653 RLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFA 712
Query: 458 MGDYNHPEADNIFVKLDEM 476
+ D +HP + I+ L+ M
Sbjct: 713 VADLSHPSSQMIYTMLETM 731
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 140/298 (46%), Gaps = 8/298 (2%)
Query: 86 FIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIH 145
F+ L +P + A D+ + + + A+ GK HG + K Y++N L++
Sbjct: 33 FLSSLCQPKN--TALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLN 90
Query: 146 MYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDAT 205
MY +LG AR+LFDRMP+R+++S+ SLI G +A+ELF EA ++++ T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 206 VVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX 265
L C + L +G +HG+V + + + LIDMY+K G ++ A
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNG-LSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 266 XXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC---RNADLVR 322
W ++ISG G +E ++L +M + + +VL AC N +
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 323 EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ M + G+E I ++D+ A+ G LKEA + MP K + V + +I
Sbjct: 270 KG-MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMI 325
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 242/443 (54%), Gaps = 16/443 (3%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+HAQI+ +G S++ P SKL LS + L+YA +L P + + YNT++ +
Sbjct: 27 QIHAQIITIGLSHHTYP--LSKLL---HLSSTVCLSYALSILRQIPNPSVFLYNTLISSI 81
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCA-RLKLARQGKQLHGFIT 129
+ + T A SL+ +L ++ V P+ FT+P + K + R G+ LH +
Sbjct: 82 VSNHNSTQTHLAFSLYDQILSSRSNFV-RPNEFTYPSLFKASGFDAQWHRHGRALHAHVL 140
Query: 130 KM--GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH---DRP 184
K D ++ AL+ Y+ G L AR LF+R+ + D+ +W +L+ + D
Sbjct: 141 KFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSD 200
Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
E + LF RM V N+ ++V+++++CA+ G G H V K + V T+
Sbjct: 201 EEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVL-KNNLTLNQFVGTS 256
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
LID+Y+K GC+ A + AMI GLA HG +E I+L+ + + + PD
Sbjct: 257 LIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD 316
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
T +SAC ++ LV E +F+ MK YGIEP ++H+GC+VDLL R+G L+EAE+ +
Sbjct: 317 SATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECI 376
Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
MP+KP+A LWR+ + + + H D ER E +K L + ++SG+Y+L SN+YA V +W+
Sbjct: 377 KKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWT 436
Query: 425 NKAEVRELMNKKGLIKPPGSSRI 447
+ + RELM + K PG S +
Sbjct: 437 DVEKTRELMKDHRVNKSPGISTL 459
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 137/318 (43%), Gaps = 20/318 (6%)
Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV 168
L ++ K + KQ+H I +G Y ++ L+H+ S L A + ++P+ V
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSV 71
Query: 169 VSWTSLIDGLVDHDRPVE---AIELFGRMLEAG---VEVNDATVVSVLRACA-DSGALSM 221
+ +LI +V + + A L+ ++L + V N+ T S+ +A D+
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 222 GRKVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
GR +H ++K + + V AL+ YA G + A W +++
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 281 ASHGLC---KEAIDLFLEMETCNVKPDERTMTAVLSACRN-ADLVREAYMVFSDMKKRYG 336
A+ +E + LF+ M+ V+P+E ++ A++ +C N + VR + +K
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
+ + ++DL ++ GCL A + M + D + +I VH + L
Sbjct: 249 LNQFVG--TSLIDLYSKCGCLSFARKVFDEMSQR-DVSCYNAMIRGLAVHGFGQEGIELY 305
Query: 397 KQHLEMG-VDDSGSYILA 413
K + G V DS ++++
Sbjct: 306 KSLISQGLVPDSATFVVT 323
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/469 (32%), Positives = 235/469 (50%), Gaps = 47/469 (10%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCA----RLKLARQGKQLHGFITKMGFGSDC 137
ALS+F M R D+FT P +L C A +K+A H I K G+ +
Sbjct: 312 ALSMFGRMHERDMK----IDDFTIPSILNCFALSRTEMKIASSA---HCLIVKTGYATYK 364
Query: 138 YIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
+ NAL+ MY+ G + A ++F+ M ++DV+SWT+L+ G + EA++LF M
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
G+ + SVL A A+ L G++VHG K +V+ +L+ MY K G +E
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYI-KSGFPSSLSVNNSLVTMYTKCGSLED 483
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
A WT +I G A +GL
Sbjct: 484 ANVIFNSMEIRDLITWTCLIVGYAKNGL-------------------------------- 511
Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
+ +A F M+ YGI P +H+ C++DL R+G + E ++ M ++PDA +W+
Sbjct: 512 ---LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWK 568
Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
++ A + H + E ER K +E+ +++ Y+ SN+Y++ G+ A VR LM +
Sbjct: 569 AILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRN 628
Query: 438 LIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEID 497
+ K PG S +E G +H F+ D HP I+ K+DEM+ +K+ GY +S L ++D
Sbjct: 629 ISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLD 688
Query: 498 DEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLI 546
E K L +HSEKLA+A+GL+ G+ IRI+KNLR C DCH MKL+
Sbjct: 689 KEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 161/337 (47%), Gaps = 11/337 (3%)
Query: 59 NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
N+ + +ML YS + F A+ F + R + +TFP VL CA +
Sbjct: 191 NNVTWTSMLTGYSQNG---FAFKAIECFRDLRREGNQ----SNQYTFPSVLTACASVSAC 243
Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
R G Q+H I K GF ++ Y+ +ALI MY+ ++ AR L + M DVVSW S+I G
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA-LSMGRKVHGIVKEKKRIEC 237
V EA+ +FGRM E ++++D T+ S+L A S + + H ++ +
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
K V+ AL+DMYAK G ++SA WTA+++G +G EA+ LF M
Sbjct: 364 KL-VNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMR 422
Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
+ PD+ +VLSA L+ V + K G ++ +V + + G L
Sbjct: 423 VGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSL 481
Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
++A N+M ++ D + W LI + E A+R
Sbjct: 482 EDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQR 517
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 162/351 (46%), Gaps = 20/351 (5%)
Query: 36 FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
A S S L+ A L SNP N+ +N ++ Y S F+ LF M +
Sbjct: 66 IVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFN---LFWEM---QSD 119
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
G+ P+ +T VL+ C L L +G+Q+HG K GF D ++N L+ MY+ +
Sbjct: 120 GIK-PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISE 178
Query: 156 ARELFDRMP-DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
A LF+ M +++ V+WTS++ G + +AIE F + G + N T SVL ACA
Sbjct: 179 AEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA 238
Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
A +G +VH + K + V +ALIDMYAK +ESA W
Sbjct: 239 SVSACRVGVQVHCCIV-KSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWN 297
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD---- 330
+MI G GL EA+ +F M ++K D+ T+ ++L+ L R + S
Sbjct: 298 SMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNC---FALSRTEMKIASSAHCL 354
Query: 331 -MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+K Y + + +VD+ A+ G + A M ++ D + W L+
Sbjct: 355 IVKTGYATYKLVNN--ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 4/249 (1%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
D + N +I YS L A +LF P ++ +SW +LI G VEA LF M
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
G++ N+ T+ SVLR C L G ++HG K + NV L+ MYA+ I
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI-KTGFDLDVNVVNGLLAMYAQCKRI 176
Query: 256 -ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
E+ WT+M++G + +G +AI+ F ++ + ++ T +VL+A
Sbjct: 177 SEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTA 236
Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
C + R V + K G + I ++D+ A+ ++ A + M + D V
Sbjct: 237 CASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVV 294
Query: 375 LWRTLIWAC 383
W ++I C
Sbjct: 295 SWNSMIVGC 303
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 207/347 (59%), Gaps = 4/347 (1%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGV 199
+IH Y D+ AR+LFD MP+R++VSW ++I G + +P E I LF M +
Sbjct: 211 TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSL 270
Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
+ +D T++SVL A +D+GALS+G H V ++K+++ K V TA++DMY+K G IE A
Sbjct: 271 DPDDVTILSVLPAISDTGALSLGEWCHCFV-QRKKLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
W AMI G A +G + A+DLF+ M KPDE TM AV++AC +
Sbjct: 330 RIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGG 388
Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
LV E F M++ G+ I+H+GC+VDLL RAG LKEAED + MP +P+ ++ +
Sbjct: 389 LVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSF 447
Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
+ AC ++D ERAER++K+ +E+ + G+Y+L N+YA+ +W + V+ +M K
Sbjct: 448 LSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAK 507
Query: 440 KPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYN 486
K G S IE++ + EF+ GD HP +I + L +++ + +E YN
Sbjct: 508 KEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKYN 554
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 26/356 (7%)
Query: 32 KLFT-FAALSPSG-DLNYARLLLTSNPALN-SYYYNTMLRAYSLSSDPTHHFHALSLFIF 88
++FT F +S S + YAR L P + S+ N+M++AY + + + +L+
Sbjct: 11 QIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYL---ETRQYPDSFALY-R 66
Query: 89 MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS 148
LR+ T APDNFTF + K C+ QG QLH I + GF +D Y+ ++ MY+
Sbjct: 67 DLRKET--CFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 149 VFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVV- 207
FG +G AR FD MP R VSWT+LI G + A +LF +M V D +
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM----PHVKDVVIYN 180
Query: 208 SVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
+++ SG ++ R++ + K I T +I Y I++A
Sbjct: 181 AMMDGFVKSGDMTSARRLFDEMTHKTVI-----TWTTMIHGYCNIKDIDAARKLFDAMPE 235
Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKPDERTMTAVLSACRNADLVR--EA 324
W MI G + +E I LF EM+ T ++ PD+ T+ +VL A + + E
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEW 295
Query: 325 YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
F KK ++ ++ ++D+ ++ G +++A+ + MP K A W +I
Sbjct: 296 CHCFVQRKK---LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS-WNAMI 347
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 134/320 (41%), Gaps = 47/320 (14%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
D++ AR L + P N +NTM+ Y + P + +F + T + PD+
Sbjct: 222 DIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQE-----GIRLFQEMQATTSLD-PDDV 275
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
T VL + G+ H F+ + + A++ MYS G++ A+ +FD M
Sbjct: 276 TILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM 335
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
P++ V SW ++I G + A++LF M+ + ++ T+++V+ AC G + GR
Sbjct: 336 PEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGR 394
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
K +++E A I+ Y GC M+ L
Sbjct: 395 KWFHVMREMGL--------NAKIEHY---GC---------------------MVDLLGRA 422
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
G KEA DL M +P+ +++ LSAC + A + +KK +EP Q+
Sbjct: 423 GSLKEAEDLITNMP---FEPNGIILSSFLSACGQYKDIERAERI---LKKAVELEP--QN 474
Query: 344 FGCVVDLLARAGCLKEAEDF 363
G V L K +DF
Sbjct: 475 DGNYVLLRNLYAADKRWDDF 494
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 273/535 (51%), Gaps = 64/535 (11%)
Query: 6 MSEALQLHAQILKLG--TSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
+SE Q+H I+ G + N + K + G+ A + P + +
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYM-----ELGNFGVAEKVFARMPHPDVSSF 200
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
N M+ Y+ AL L+ M+ + G+ PD +T +L CC L R GK
Sbjct: 201 NVMIVGYA---KQGFSLEALKLYFKMV---SDGIE-PDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 124 LHGFITKMG--FGSDCYIMNALIHMY-------------------------------SVF 150
+HG+I + G + S+ + NAL+ MY
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL 313
Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI-ELFGRM-LEAGVEVNDATVVS 208
GD+ A+ +FD+MP RD+VSW SL+ G + ELF M + V+ + T+VS
Sbjct: 314 GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCN--VSTALIDMYAKSGCIESAXXXXXXXX 266
++ A++G LS GR VHG+V R++ K + +S+ALIDMY K G IE A
Sbjct: 374 LISGAANNGELSHGRWVHGLVI---RLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
WT+MI+GLA HG ++A+ LF M+ V P+ T+ AVL+AC ++ LV E
Sbjct: 431 EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLH 490
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN-AMPMKPDAVLWRTLIWACKV 385
VF+ MK ++G +P +H+G +VDLL RAG ++EA+D + MPM+P +W +++ AC+
Sbjct: 491 VFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRG 550
Query: 386 HEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPG-S 444
ED E AE + + L++ + G Y+L SN+YA+VG+W + RE M +G+ K G S
Sbjct: 551 GEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Query: 445 SRIEVDGALHEFVMGD-YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEV-LLEID 497
S + V+G LH FV + NHP I L + +++K PKL + LLEI+
Sbjct: 611 SVVGVEG-LHRFVAAEKQNHPRWTEIKRILQHLYNEMK-----PKLDCLDLLEIE 659
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 201/446 (45%), Gaps = 66/446 (14%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLL-LTSNPALNSYYYNTMLRA 69
Q+ AQI++ + P S+L F+A++ +L+ A+LL L P N + YNTM+ A
Sbjct: 52 QVLAQIMRFNLICDTFP--MSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISA 109
Query: 70 YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
S S + L+ M+R H V +PD TF +++K + L + KQ+H I
Sbjct: 110 VSSSKN-----ECFGLYSSMIR---HRV-SPDRQTFLYLMKASSFLS---EVKQIHCHII 157
Query: 130 KMG-FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
G Y+ N+L+ Y G+ GVA ++F RMP DV S+ +I G +EA+
Sbjct: 158 VSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEAL 217
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI-ECKCNVSTALID 247
+L+ +M+ G+E ++ TV+S+L C + +G+ VHG ++ + + +S AL+D
Sbjct: 218 KLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLD 277
Query: 248 MYAKS-------------------------------GCIESAXXXXXXXXXXXXXXWTAM 276
MY K G +E+A W ++
Sbjct: 278 MYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSL 337
Query: 277 ISGLASHGLCKEAI-DLFLEMETC-NVKPDERTMTAVLS-ACRNADLVREAYMVFSDMKK 333
+ G + G + + +LF EM VKPD TM +++S A N +L ++
Sbjct: 338 LFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV------- 390
Query: 334 RYGIEPTIQHFG------CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
+G+ +Q G ++D+ + G ++ A K D LW ++I H
Sbjct: 391 -HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK-DVALWTSMITGLAFHG 448
Query: 388 DTERAERLMKQHLEMGVDDSGSYILA 413
+ ++A +L + E GV + +LA
Sbjct: 449 NGQQALQLFGRMQEEGVTPNNVTLLA 474
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 144/462 (31%), Positives = 233/462 (50%), Gaps = 39/462 (8%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD+ AR + +P + +N ++ Y + + L + GV PD+
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM------ESEGVK-PDD 257
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGD---------- 152
T ++ C+ L +GK+ + ++ + G ++NAL+ M+S GD
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
Query: 153 ---------------------LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
L V+R+LFD M ++DVV W ++I G V R +A+ LF
Sbjct: 318 LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALF 377
Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
M + + ++ T++ L AC+ GAL +G +H + EK + + T+L+DMYAK
Sbjct: 378 QEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI-EKYSLSLNVALGTSLVDMYAK 436
Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
G I A +TA+I GLA HG AI F EM + PDE T +
Sbjct: 437 CGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 312 LSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
LSAC + +++ FS MK R+ + P ++H+ +VDLL RAG L+EA+ M +MPM+
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRE 431
DA +W L++ C++H + E E+ K+ LE+ DSG Y+L +Y W + R
Sbjct: 557 DAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARR 616
Query: 432 LMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKL 473
+MN++G+ K PG S IEV+G + EF++ D + PE++ I+ +L
Sbjct: 617 MMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 200/427 (46%), Gaps = 44/427 (10%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+ AQ++ G + P S+L F ALS S L+Y+ +L N + +N +R +
Sbjct: 71 QIQAQMIINGLILD--PFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGV--PAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
S S +P F L+ MLR HG PD+FT+P + K CA L+L+ G + G +
Sbjct: 129 SESENPKESF---LLYKQMLR---HGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHV 182
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
K+ ++ NA IHM++ GD+ AR++FD P RD+VSW LI+G +AI
Sbjct: 183 LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI 242
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
++ M GV+ +D T++ ++ +C+ G L+ G++ + VKE + + AL+DM
Sbjct: 243 YVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG-LRMTIPLVNALMDM 301
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC---------------------- 286
++K G I A WT MISG A GL
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMI 361
Query: 287 ---------KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
++A+ LF EM+T N KPDE TM LSAC + + ++K Y +
Sbjct: 362 GGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSL 420
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
+ +VD+ A+ G + EA + + + +++ + +I +H D A
Sbjct: 421 SLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFN 479
Query: 398 QHLEMGV 404
+ ++ G+
Sbjct: 480 EMIDAGI 486
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 155/463 (33%), Positives = 243/463 (52%), Gaps = 13/463 (2%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
LN A + S+ NS ++ M+ YS + + A+ LF M + G+ P +
Sbjct: 271 SLNEACKMFDSSGDRNSITWSAMVTGYSQNGES---LEAVKLFSRMF---SAGIK-PSEY 323
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
T VL C+ + +GKQLH F+ K+GF + AL+ MY+ G L AR+ FD +
Sbjct: 324 TIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCL 383
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
+RDV WTSLI G V + EA+ L+ RM AG+ ND T+ SVL+AC+ L +G+
Sbjct: 384 QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Query: 224 KVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
+VHG +K +E + +AL MY+K G +E W AMISGL+
Sbjct: 444 QVHGHTIKHGFGLEVP--IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSH 501
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
+G EA++LF EM ++PD+ T ++SAC + V + F+ M + G++P +
Sbjct: 502 NGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVD 561
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
H+ C+VDLL+RAG LKEA++F+ + + LWR L+ ACK H E ++ + +
Sbjct: 562 HYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMAL 621
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
G +S +Y+ S +Y ++G+ + V + M G+ K G S IE+ H FV+GD
Sbjct: 622 GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTM 681
Query: 463 HPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQL 505
HP + + + ++ +EG+ L +E EE+ TQL
Sbjct: 682 HPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVE---EEEGTQL 721
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 169/351 (48%), Gaps = 10/351 (2%)
Query: 56 PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
P N+Y ++TM+ Y+ A+ +F LR G + ++ F VL A
Sbjct: 180 PERNTYTWSTMVSGYATRGRVEE---AIKVFNLFLREKEEG--SDSDYVFTAVLSSLAAT 234
Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI 175
G+Q+H K G + NAL+ MYS L A ++FD DR+ ++W++++
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 176 DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
G + +EA++LF RM AG++ ++ T+V VL AC+D L G+++H + K
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL-KLGF 353
Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
E +TAL+DMYAK+GC+ A WT++ISG + +EA+ L+
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLARA 354
M+T + P++ TM +VL AC + + V +K +G+E I + + ++
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKC 471
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
G L++ P K D V W +I + + A L ++ L G++
Sbjct: 472 GSLEDGNLVFRRTPNK-DVVSWNAMISGLSHNGQGDEALELFEEMLAEGME 521
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 183/395 (46%), Gaps = 13/395 (3%)
Query: 12 LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
+H QI++ G S N L F A G L A + + + +N+++ YS
Sbjct: 36 VHGQIIRTGASTCIQHANV--LVNFYA--KCGKLAKAHSIFNAIICKDVVSWNSLITGYS 91
Query: 72 LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
+ + + + LF M + P+ +T + K + L+ + G+Q H + KM
Sbjct: 92 QNGGISSSYTVMQLFREMRAQDI----LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
D Y+ +L+ MY G + ++F MP+R+ +W++++ G R EAI++F
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 192 GRMLEAGVEVNDATVV--SVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
L E +D+ V +VL + A + + +GR++H I K + +S AL+ MY
Sbjct: 208 NLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITI-KNGLLGFVALSNALVTMY 266
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
+K + A W+AM++G + +G EA+ LF M + +KP E T+
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
VL+AC + + E + S + K G E + +VD+ A+AGCL +A + +
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
+ D LW +LI + D E A L ++ G+
Sbjct: 386 R-DVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 20/294 (6%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPA 57
++ + E QLH+ +LKLG + LF AL + +G L AR
Sbjct: 334 DICYLEEGKQLHSFLLKLGFERH--------LFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 58 LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKL 117
+ + +++ Y +SD I R T G+ P++ T VLK C+ L
Sbjct: 386 RDVALWTSLISGYVQNSDNEE------ALILYRRMKTAGI-IPNDPTMASVLKACSSLAT 438
Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
GKQ+HG K GFG + I +AL MYS G L +F R P++DVVSW ++I G
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
L + + EA+ELF ML G+E +D T V+++ AC+ G + G ++ ++ ++
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX-XWTAMISGLASHGLCKEAI 290
K + ++D+ +++G ++ A W ++S +HG C+ +
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGV 612
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 8/200 (4%)
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
G+ +HG I + G + N L++ Y+ G L A +F+ + +DVVSW SLI G
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 181 H---DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
+ ++LF M + N T+ + +A + + ++GR+ H +V +
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG- 151
Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAI---DLFL 294
V T+L+ MY K+G +E W+ M+SG A+ G +EAI +LFL
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 295 EMETCNVKPDERTMTAVLSA 314
E + TAVLS+
Sbjct: 212 R-EKEEGSDSDYVFTAVLSS 230
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 226/426 (53%), Gaps = 39/426 (9%)
Query: 61 YYYNTMLRAYSLSSDPTHHFHALSLF--IFMLRRPTHGVPAPDNFTFPFVLKCCA--RLK 116
+ +N +LR YSL P H + + L +P D+FT+ F+LK + R
Sbjct: 78 FLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFP 137
Query: 117 LARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD--------------- 161
G LHG K+GF S Y+ AL+ MY V G++ A ++FD
Sbjct: 138 SLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMIT 197
Query: 162 ----------------RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA-GVEVNDA 204
+MP+R VVSWT++IDG D+P EAI LF RM+ ++ N+
Sbjct: 198 GLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEI 257
Query: 205 TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
T++++L A + G L M VH V ++ + C V+ +LID YAK GCI+SA
Sbjct: 258 TILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIE 317
Query: 265 XXX--XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR 322
WT MIS A HG+ KEA+ +F +ME +KP+ TM +VL+AC + L
Sbjct: 318 IPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAE 377
Query: 323 EAYM-VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
E ++ F+ M Y I P ++H+GC+VD+L R G L+EAE +P++ AV+WR L+
Sbjct: 378 EEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLG 437
Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
AC V++D E AER+ ++ +E+ G Y+L SN++ G++ + R+ M+ +G+ K
Sbjct: 438 ACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKL 497
Query: 442 PGSSRI 447
PG S++
Sbjct: 498 PGHSQV 503
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 245/479 (51%), Gaps = 25/479 (5%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS-VFGDLGVARELFDRMPD- 165
V KCC QLH K G + + ALI +YS + D +LF M
Sbjct: 282 VSKCCL---------QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHC 332
Query: 166 RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
RD+V+W +I +D P AI LFG++ + + + T SVL+ACA +
Sbjct: 333 RDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSI 391
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
H V K ++ +LI YAK G ++ W +M+ + HG
Sbjct: 392 HAQVI-KGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQ 450
Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
+ +F +M+ + PD T A+LSAC +A V E +F M ++ P + H+
Sbjct: 451 VDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYA 507
Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
CV+D+L+RA EAE+ + MPM PDAV+W L+ +C+ H +T R +L L+ V+
Sbjct: 508 CVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNT-RLGKLAADKLKELVE 566
Query: 406 --DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
+S SYI SN+Y + G ++ + M + K P S E+ +HEF G +
Sbjct: 567 PTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHR 626
Query: 464 PEADNIFVKLDEMVDKLKKEGYNPKL-SEVLLEIDDEEKATQLLHHSEKLALAYGLIRTS 522
P+ + ++ +L ++ LK+ GY P++ S D+E++ LLHHSEKLALA+ ++
Sbjct: 627 PDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGR 686
Query: 523 QGSK-----IRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+ S I+I+KN R C DCH FMKL SK+ ++I++RD RFHHFK+ CSC DYW
Sbjct: 687 KSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 11/225 (4%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
+PD +TF VLK CA L AR +H + K GF +D + N+LIH Y+ G L +
Sbjct: 366 SPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMR 425
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
+FD M RDVVSW S++ H + + +F +M + + AT +++L AC+ +G
Sbjct: 426 VFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGR 482
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMI 277
+ G ++ + EK + N +IDM +++ E+ W A++
Sbjct: 483 VEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
Query: 278 SGLASHG---LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
HG L K A D E+ V+P +S NA+
Sbjct: 543 GSCRKHGNTRLGKLAADKLKEL----VEPTNSMSYIQMSNIYNAE 583
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 24/308 (7%)
Query: 105 FPFVLKCCARLKLARQGKQLHGFITK--MGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+ + + CA + G LH + + + + N LI+MY+ G++ AR++FD
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
MP+R+VVSWT+LI G V E LF ML N+ T+ SVL +C G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFP-NEFTLSSVLTSC----RYEPG 176
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAK---SGCIESAXXXXXXXXXXXXXXWTAMISG 279
++VHG+ K + C V+ A+I MY + A W +MI+
Sbjct: 177 KQVHGLAL-KLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC-RNADL----VREAYMVFSDMKKR 334
L K+AI +F+ M + V D T+ + S+ +++DL V + + + +
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVK 295
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAED----FMNAMPMKPDAVLWRTLIWACKVHEDTE 390
G+ + ++ + + L++ D FM M D V W +I A V+ D E
Sbjct: 296 SGLVTQTEVATALIKVYSEM--LEDYTDCYKLFME-MSHCRDIVAWNGIITAFAVY-DPE 351
Query: 391 RAERLMKQ 398
RA L Q
Sbjct: 352 RAIHLFGQ 359
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 202/340 (59%), Gaps = 3/340 (0%)
Query: 141 NALIHMYSVFGDLGVARELFDRMP--DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG 198
+ ++ YS GD+ +AR +FD+MP ++VV+WT +I G + EA L +M+ +G
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
++ + A V+S+L AC +SG LS+G ++H I+K + + V AL+DMYAK G ++ A
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILK-RSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 259 XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
W M+ GL HG KEAI+LF M ++PD+ T AVL +C +A
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
L+ E F M+K Y + P ++H+GC+VDLL R G LKEA + MPM+P+ V+W
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 379 LIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
L+ AC++H + + A+ ++ +++ D G+Y L SN+YA+ W A++R M G+
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 439 IKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVD 478
KP G+S +E++ +HEF + D +HP++D I+ L +++
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 190/407 (46%), Gaps = 30/407 (7%)
Query: 4 TTMSEALQLHAQILK--LGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
+++ QLHAQI++ L + AP+ S ALS N A + N +
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLIS------ALSLCRQTNLAVRVFNQVQEPNVH 83
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
N+++RA++ +S P + A +F M R G+ A DNFT+PF+LK C+
Sbjct: 84 LCNSLIRAHAQNSQP---YQAFFVFSEMQR---FGLFA-DNFTYPFLLKACSGQSWLPVV 136
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV--ARELFDRMPDRDVVSWTSLIDGLV 179
K +H I K+G SD Y+ NALI YS G LGV A +LF++M +RD VSW S++ GLV
Sbjct: 137 KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLV 196
Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
+A LF M + + + + R S A + K + E+ +
Sbjct: 197 KAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEK----MPERNTVSW-- 250
Query: 240 NVSTALIDMYAKSGCIESAXXX--XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
+ ++ Y+K+G +E A WT +I+G A GL KEA L +M
Sbjct: 251 ---STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
+K D + ++L+AC + L+ + S + KR + ++D+ A+ G L
Sbjct: 308 ASGLKFDAAAVISILAACTESGLLSLGMRIHSIL-KRSNLGSNAYVLNALLDMYAKCGNL 366
Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
K+A D N +P K D V W T++ VH + A L + G+
Sbjct: 367 KKAFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI 412
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L C L G ++H + + GS+ Y++NAL+ MY+ G+L A ++F+ +P +D
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG----- 222
+VSW +++ GL H EAIELF RM G+ + T ++VL +C +G + G
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 223 --RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMISG 279
KV+ +V + + C L+D+ + G + E+ W A++
Sbjct: 441 SMEKVYDLVPQVEHYGC-------LVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
Query: 280 LASHG---LCKEAIDLFLEMETCN 300
H + KE +D ++++ C+
Sbjct: 494 CRMHNEVDIAKEVLDNLVKLDPCD 517
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 247/492 (50%), Gaps = 18/492 (3%)
Query: 83 LSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNA 142
L + M++R P+ T VL+ C++L+ R+ ++H ++ + + + N+
Sbjct: 412 FGLLMEMVKREVE----PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS 467
Query: 143 LIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
L+ Y+ + A + M RD +++TSL+ + + A+ + M G+ ++
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMD 527
Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX 262
++ + A A+ GAL G+ +H K +V +L+DMY+K G +E A
Sbjct: 528 QLSLPGFISASANLGALETGKHLH-CYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVF 586
Query: 263 XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR 322
W ++SGLAS+G A+ F EM +PD T +LSAC N L
Sbjct: 587 EEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTD 646
Query: 323 EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
F MKK Y IEP ++H+ +V +L RAG L+EA + M +KP+A++++TL+ A
Sbjct: 647 LGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRA 706
Query: 383 CKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPP 442
C+ + E + + L + D YIL +++Y GK + R LM +K L K
Sbjct: 707 CRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKL 766
Query: 443 GSSRIEVDGALHEFVMGDYNHPEADN-IFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEK 501
G S +EV G +H FV D + N I+ +++ + +++K+ G + E
Sbjct: 767 GKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYR---------GNEN 817
Query: 502 ATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIR 561
A+ HS K A+ YG I S + + +VKN C+DCHEF+ +++++ + I VRD +
Sbjct: 818 AS---FHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQ 874
Query: 562 FHHFKNGDCSCK 573
H FKNG+CSCK
Sbjct: 875 VHIFKNGECSCK 886
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 178/377 (47%), Gaps = 24/377 (6%)
Query: 9 ALQLHAQILKLGTSNN-DAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
L +H ++K G N D N L+ L G N AR L + + M+
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLY----LKTDGIWN-ARKLFDEMSHRTVFAWTVMI 96
Query: 68 RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
A++ S + ALSLF M+ TH P+ FTF V++ CA L+ G ++HG
Sbjct: 97 SAFTKSQEFAS---ALSLFEEMMASGTH----PNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
+ K GF + + ++L +YS G A ELF + + D +SWT +I LV + EA
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209
Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
++ + M++AGV N+ T V +L A + G L G+ +H + + I + T+L+D
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRG-IPLNVVLKTSLVD 267
Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
Y++ +E A WT+++SG + KEA+ FLEM + ++P+ T
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 308 MTAVLSAC---RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK-EAEDF 363
+A+LS C R+ D ++ + + G E + +VD+ + + EA
Sbjct: 328 YSAILSLCSAVRSLDFGKQIH----SQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV 383
Query: 364 MNAMPMKPDAVLWRTLI 380
AM + P+ V W TLI
Sbjct: 384 FGAM-VSPNVVSWTTLI 399
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 4/241 (1%)
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
GVP P+ FTF +L + L L GK +H I G + + +L+ YS F +
Sbjct: 220 GVP-PNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
A + + ++DV WTS++ G V + R EA+ F M G++ N+ T ++L C+
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSA 337
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIE-SAXXXXXXXXXXXXXXWT 274
+L G+++H K E +V AL+DMY K E A WT
Sbjct: 338 VRSLDFGKQIHSQTI-KVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
+I GL HG ++ L +EM V+P+ T++ VL AC VR + + + +R
Sbjct: 397 TLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRR 456
Query: 335 Y 335
+
Sbjct: 457 H 457
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 4/263 (1%)
Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
+R G +H + K G + + N L+ +Y + AR+LFD M R V +WT +I
Sbjct: 39 SRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISA 98
Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
A+ LF M+ +G N+ T SV+R+CA +S G +VHG V K E
Sbjct: 99 FTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVI-KTGFEG 157
Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
V ++L D+Y+K G + A WT MIS L +EA+ + EM
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
V P+E T +L A L + S++ R GI + +VD ++ +
Sbjct: 218 KAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVVLKTSLVDFYSQFSKM 275
Query: 358 KEAEDFMNAMPMKPDAVLWRTLI 380
++A +N+ + D LW +++
Sbjct: 276 EDAVRVLNS-SGEQDVFLWTSVV 297
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 249/512 (48%), Gaps = 50/512 (9%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
M+ QLHA L+ G L L P +L YAR L + ++ YN
Sbjct: 1 MNGIKQLHAHCLRTGVDET------KDLLQRLLLIP--NLVYARKLFDHHQNSCTFLYNK 52
Query: 66 MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
+++AY + P +L F RP+H TF F+ A AR + LH
Sbjct: 53 LIQAYYVHHQPHESIVLYNLLSFDGLRPSH-------HTFNFIFAASASFSSARPLRLLH 105
Query: 126 GFITKMGFGSDCY-------------------------------IMNALIHMYSVFGDLG 154
+ GF SD + + NA+I Y GD+
Sbjct: 106 SQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMK 165
Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRAC 213
A ELFD MP ++V SWT++I G + EA+++F M + V+ N TVVSVL AC
Sbjct: 166 AAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPAC 225
Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX-X 272
A+ G L +GR++ G +E + V A I+MY+K G I+ A
Sbjct: 226 ANLGELEIGRRLEGYARENGFFD-NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCS 284
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
W +MI LA+HG EA+ LF +M KPD T +L AC + +V + +F M+
Sbjct: 285 WNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 344
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
+ + I P ++H+GC++DLL R G L+EA D + MPMKPDAV+W TL+ AC H + E A
Sbjct: 345 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Query: 393 ERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR-IEVDG 451
E + ++ + G+ ++ SN+YA+ KW +R+LM K+ + K G S +EV
Sbjct: 405 EIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGV 464
Query: 452 ALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
+H+F + D +HP + I+ L+E+ ++K E
Sbjct: 465 DVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 496
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 244/476 (51%), Gaps = 17/476 (3%)
Query: 12 LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
+H+ + K+G D N S + +A G + YAR L ++ +N+M+ YS
Sbjct: 154 VHSSLFKVGL-ERDVHINHSLIMMYA---KCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 72 LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
+ + A+ LF R+ PD T +L C+ L R G+ L
Sbjct: 210 ---EAGYAKDAMDLF----RKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK 262
Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
G ++ + LI MY GDL AR +F++M +D V+WT++I + + EA +LF
Sbjct: 263 KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
M + GV + T+ +VL AC GAL +G+++ E ++ V+T L+DMY K
Sbjct: 323 FEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS-LQHNIYVATGLVDMYGK 381
Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
G +E A W AMI+ A G KEA+ LF M +V P + T V
Sbjct: 382 CGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGV 438
Query: 312 LSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
LSAC +A LV + F +M +G+ P I+H+ ++DLL+RAG L EA +FM P KP
Sbjct: 439 LSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKP 498
Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAEVR 430
D ++ ++ AC +D E+ M+ +EM ++G+Y+++SNV A + W A++R
Sbjct: 499 DEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMR 558
Query: 431 ELMNKKGLIKPPGSSRIEVDGALHEFVMG-DYNHPEADNIFVKLDEMVDKLKKEGY 485
LM +G++K PG S IE++G L EF+ G DY ++ D +V+++K+E Y
Sbjct: 559 ALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 614
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 177/344 (51%), Gaps = 17/344 (4%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD NY+ L + N Y +N M+R L++ H ALSL+ RR PD
Sbjct: 79 GDFNYSSFLFSVTEEPNHYSFNYMIRG--LTNTWNDHEAALSLY----RRMKFSGLKPDK 132
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
FT+ FV CA+L+ G+ +H + K+G D +I ++LI MY+ G +G AR+LFD
Sbjct: 133 FTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDE 192
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ +RD VSW S+I G + +A++LF +M E G E ++ T+VS+L AC+ G L G
Sbjct: 193 ITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG 252
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
R + + KK I + + LI MY K G ++SA WTAMI+ +
Sbjct: 253 RLLEEMAITKK-IGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQ 311
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
+G EA LF EME V PD T++ VLSAC + + + + + E ++Q
Sbjct: 312 NGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQI-----ETHASELSLQ 366
Query: 343 HFGCV----VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
H V VD+ + G ++EA AMP+K +A W +I A
Sbjct: 367 HNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT-WNAMITA 409
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 226/417 (54%), Gaps = 10/417 (2%)
Query: 31 SKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFML 90
S LFT S G L + L P ++ + +M+ ++ + + A+ LF ML
Sbjct: 489 SSLFTL--YSKCGSLEESYKLFQGIPFKDNACWASMISGFN---EYGYLREAIGLFSEML 543
Query: 91 RRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVF 150
T +PD T VL C+ +GK++HG+ + G + +AL++MYS
Sbjct: 544 DDGT----SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
G L +AR+++DR+P+ D VS +SLI G H + LF M+ +G ++ + S+L
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
+A A S S+G +VH + K + + +V ++L+ MY+K G I+
Sbjct: 660 KAAALSDESSLGAQVHAYIT-KIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDL 718
Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
WTA+I+ A HG EA+ ++ M+ KPD+ T VLSAC + LV E+Y +
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNS 778
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
M K YGIEP +H+ C+VD L R+G L+EAE F+N M +KPDA++W TL+ ACK+H + E
Sbjct: 779 MVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
+ K+ +E+ D+G+YI SN+ A VG+W E R+LM G+ K PG S +
Sbjct: 839 LGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 8/319 (2%)
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
G PD++T+ VL CA L+ R GK + + K G D ++ A++ +Y+ G +
Sbjct: 245 GFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAE 303
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
A E+F R+P+ VVSWT ++ G + A+E+F M +GVE+N+ TV SV+ AC
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIE-SAXXXXXXXXXXXXXXWT 274
+ +VH V K +V+ ALI MY+KSG I+ S
Sbjct: 364 PSMVCEASQVHAWVF-KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN 422
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
MI+ + +AI LF M ++ DE ++ ++LS +L ++ + +
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVH----GYTLK 478
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
G+ + + L ++ G L+E+ +P K +A W ++I + A
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC-WASMISGFNEYGYLREAIG 537
Query: 395 LMKQHLEMGVDDSGSYILA 413
L + L+ G S + A
Sbjct: 538 LFSEMLDDGTSPDESTLAA 556
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 180/402 (44%), Gaps = 28/402 (6%)
Query: 8 EALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTS-NPALNSYY 62
EA Q+HA + K G + + AAL S SGD++ + + +
Sbjct: 369 EASQVHAWVFKSGFYLDSS--------VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
N M+ ++S S P A+ LF ML+ D F+ +L L L GK
Sbjct: 421 VNVMITSFSQSKKPGK---AIRLFTRMLQEGLR----TDEFSVCSLLSVLDCLNL---GK 470
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
Q+HG+ K G D + ++L +YS G L + +LF +P +D W S+I G ++
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
EAI LF ML+ G +++T+ +VL C+ +L G+++HG + I+ ++
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL-RAGIDKGMDLG 589
Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
+AL++MY+K G ++ A +++ISG + HGL ++ LF +M
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKK-RYGIEPTIQHFGCVVDLLARAGCLKEAE 361
D ++++L A +D V + + K EP++ ++ + ++ G + +
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG--SSLLTMYSKFGSIDDCC 707
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
+ + PD + W LI + H A ++ E G
Sbjct: 708 KAFSQIN-GPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 14/301 (4%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
D ++ +L+ YS G + A +LFD +P DVVS +I G H E++ F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKV--HGIVKEKKRIECKCNVSTALIDMYAKSG 253
G E N+ + SV+ AC+ A V H I E V +ALID+++K+
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV---VESALIDVFSKNL 199
Query: 254 CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
E A W +I+G + DLF EM KPD T ++VL+
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 314 ACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC--VVDLLARAGCLKEAEDFMNAMPMKP 371
AC + + +R +V + + K G E F C +VDL A+ G + EA + + +P P
Sbjct: 260 ACASLEKLRFGKVVQARVIK-CGAEDV---FVCTAIVDLYAKCGHMAEAMEVFSRIP-NP 314
Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRE 431
V W ++ D A + K+ GV+ + + ++V ++ G+ S E +
Sbjct: 315 SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV--TSVISACGRPSMVCEASQ 372
Query: 432 L 432
+
Sbjct: 373 V 373
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 216/392 (55%), Gaps = 7/392 (1%)
Query: 100 PDNFTFPFVLKCCARLK--LARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
PD + +L CA+ K QG Q+H +I K GF +D + N+L+ MY+ DL
Sbjct: 369 PDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 158 ELF-DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
LF D + D VSW +++ + H++PVE + LF ML + E + T+ ++LR C +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
+L +G +VH K + + + LIDMYAK G + A W+ +
Sbjct: 487 SSLKLGSQVH-CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
I G A G +EA+ LF EM++ ++P+ T VL+AC + LV E +++ M+ +G
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
I PT +H CVVDLLARAG L EAE F++ M ++PD V+W+TL+ ACK + A++
Sbjct: 606 ISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAA 665
Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
+ L++ +S +++L +++AS G W N A +R M K + K PG S IE++ +H F
Sbjct: 666 ENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIF 725
Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
D HPE D+I+ L + ++ E NP+
Sbjct: 726 FAEDIFHPERDDIYTVLHNIWSQMLDE-CNPQ 756
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 155/360 (43%), Gaps = 18/360 (5%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G L AR + P N Y +++ YS + A+ L++ ML+ PD
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAE---AIRLYLKMLQEDL----VPDQ 168
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
F F ++K CA GKQLH + K+ S NALI MY F + A +F
Sbjct: 169 FAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYG 228
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV-EVNDATVVSVLRACADSGALSM 221
+P +D++SW+S+I G EA+ ML GV N+ S L+AC+
Sbjct: 229 IPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY 288
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
G ++HG+ K + +L DMYA+ G + SA W +I+GLA
Sbjct: 289 GSQIHGLCI-KSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
++G EA+ +F +M + PD ++ ++L A + + + S + K +G +
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADL 406
Query: 342 QHFGCVVDLLARAG----CLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
++ + C EDF N D+V W T++ AC HE RL K
Sbjct: 407 TVCNSLLTMYTFCSDLYCCFNLFEDFRN----NADSVSWNTILTACLQHEQPVEMLRLFK 462
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 157/340 (46%), Gaps = 23/340 (6%)
Query: 6 MSEALQLHAQILKLG-TSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTS--NPALNSYY 62
+S+ +Q+H+ I+K G ++ + ++TF + DL L N A +S
Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS-----DLYCCFNLFEDFRNNA-DSVS 440
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+NT+L A P L LF ML PD+ T +L+ C + + G
Sbjct: 441 WNTILTACLQHEQPVE---MLRLFKLMLVSECE----PDHITMGNLLRGCVEISSLKLGS 493
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
Q+H + K G + +I N LI MY+ G LG AR +FD M +RDVVSW++LI G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
EA+ LF M AG+E N T V VL AC+ G + G K++ ++ + I
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 243 TALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMISGLASHG---LCKEAIDLFLEMET 298
+ ++D+ A++G + E+ W ++S + G L ++A + L+++
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 299 CNVKPDER--TMTAVLSACRNADLVREAYMVFSDMKKRYG 336
N +M A NA L+R + M D+KK G
Sbjct: 674 FNSTAHVLLCSMHASSGNWENAALLRSS-MKKHDVKKIPG 712
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 14/283 (4%)
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
T+ ++ C+ + QG+++H I D + N ++ MY G L ARE+FD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
P+R++VS+TS+I G + + EAI L+ +ML+ + + S+++ACA S + +G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 224 KVHGIVKEKKRIECKCNV--STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
++H V ++E ++ ALI MY + + A W+++I+G +
Sbjct: 189 QLHAQV---IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 282 SHGLCKEAIDLFLEMETCNV-KPDERTMTAVLSACRNADLVREAY--MVFSDMKKRYGIE 338
G EA+ EM + V P+E + L AC + L+R Y + K
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC--SSLLRPDYGSQIHGLCIKSELAG 303
Query: 339 PTIQHFGC-VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
I GC + D+ AR G L A + + +PD W +I
Sbjct: 304 NAIA--GCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVII 343
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 164/398 (41%), Gaps = 18/398 (4%)
Query: 11 QLHAQILKLGTSNNDAPRN--FSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
QLHAQ++KL +S++ +N + F +S + + Y P + +++++
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGI------PMKDLISWSSIIA 242
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
+S F ALS ML + GV P+ + F LK C+ L G Q+HG
Sbjct: 243 GFS---QLGFEFEALSHLKEML---SFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 296
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
K + +L MY+ G L AR +FD++ D SW +I GL ++ EA+
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
+F +M +G + ++ S+L A ALS G ++H + K V +L+ M
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII-KWGFLADLTVCNSLLTM 415
Query: 249 YAKSGCIESAXXXXX-XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
Y + W +++ H E + LF M +PD T
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
M +L C ++ V + G+ P ++D+ A+ G L +A ++M
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHC-YSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
+ D V W TLI E A L K+ G++
Sbjct: 535 DNR-DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 218/419 (52%), Gaps = 7/419 (1%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
AL L M PT + D LK C+ + R GK++HG + + N
Sbjct: 264 ALGLISRMRNFPT----SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRN 319
Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
LI MYS DL A +F + + + +W S+I G ++ EA L ML AG +
Sbjct: 320 TLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP 379
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
N T+ S+L CA L G++ H + +K + + +L+D+YAKSG I +A
Sbjct: 380 NSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQV 439
Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
+T++I G + G A+ LF EM +KPD T+ AVLSAC ++ LV
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLV 499
Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
E +F M+ YGI P +QHF C+VDL RAG L +A+D ++ MP KP W TL+
Sbjct: 500 HEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLN 559
Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
AC +H +T+ + ++ LEM ++ G Y+L +N+YA+ G WS AEVR +M G+ K
Sbjct: 560 ACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKD 619
Query: 442 PGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEE 500
PG + I+ D F +GD + PEA N + LD + ++L K+ +++V + DEE
Sbjct: 620 PGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGL-NQLMKDNAGYAINKV--QSSDEE 675
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 176/415 (42%), Gaps = 48/415 (11%)
Query: 1 MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
++V +Q+HA + G + KL TF S N A+ ++ ++ L+
Sbjct: 54 VDVRAFLAGVQVHAHCISSGVEYHSVL--VPKLVTF--YSAFNLHNEAQSIIENSDILHP 109
Query: 61 YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+N ++ +Y+ + I +R PD FT+P VLK C
Sbjct: 110 LPWNVLIASYAKN-------ELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAF 162
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
G+ +HG I + S Y+ NALI MY F ++G+AR LFDRM +RD VSW ++I+
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 181 HDRPVEAIELFGRMLEAGVEVNDAT----------------------------------- 205
EA ELF +M +GVEV+ T
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVA 282
Query: 206 VVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX 265
++ L+AC+ GA+ +G+++HG+ + NV LI MY+K + A
Sbjct: 283 MIIGLKACSLIGAIRLGKEIHGLAIHSS-YDGIDNVRNTLITMYSKCKDLRHALIVFRQT 341
Query: 266 XXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY 325
W ++ISG A +EA L EM +P+ T+ ++L C ++
Sbjct: 342 EENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ +R + + +VD+ A++G + A+ + M K D V + +LI
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLI 455
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 1/208 (0%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L C ++ G Q+H G ++ L+ YS F A+ + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
+ W LI ++ E I + RM+ G+ + T SVL+AC ++ ++ GR VHG
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+ E + V ALI MY + + A W A+I+ AS G+
Sbjct: 169 SI-EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSAC 315
EA +LF +M V+ T + C
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGC 255
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 251/506 (49%), Gaps = 76/506 (15%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+HA ++ G +N + +L A+LS G L YA L P + N +LR
Sbjct: 30 QIHASMVVNGLMSNLSV--VGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGS 87
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLK-----LARQGKQL- 124
+ S P +SL+ M +R GV +PD +TF FVLK C++L+ A GK +
Sbjct: 88 AQSMKPEK---TVSLYTEMEKR---GV-SPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 125 HGFITK----------------MGFGSDCYIMNALIH------MYSVFGDLG-------- 154
HGF+ +G S+ + +A H M S + G
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 155 --------------------------VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
ARELFDR ++DVV+W ++I G V+ P EA+
Sbjct: 201 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST----A 244
+F M +AG + T++S+L ACA G L G+++H + E + V T A
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
LIDMYAK G I+ A W +I GLA H + +I++F EM+ V P+
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPN 379
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
E T V+ AC ++ V E FS M+ Y IEP I+H+GC+VD+L RAG L+EA F+
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
+M ++P+A++WRTL+ ACK++ + E + ++ L M D+SG Y+L SN+YAS G+W
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 499
Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVD 450
+VR++ + + KP G S IE D
Sbjct: 500 GVQKVRKMFDDTRVKKPTGVSLIEED 525
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 131/328 (39%), Gaps = 20/328 (6%)
Query: 89 MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM-- 146
M+RR T+ N P + + C + R KQ+H + G S+ ++ LI+
Sbjct: 1 MIRRQTN--DRTTNRRRPKLWQNCKNI---RTLKQIHASMVVNGLMSNLSVVGELIYSAS 55
Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
SV G L A +LFD +P DV ++ G +P + + L+ M + GV + T
Sbjct: 56 LSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTF 115
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
VL+AC+ S G HG V + V ALI +A G + A
Sbjct: 116 TFVLKACSKLEWRSNGFAFHGKVVRHGFV-LNEYVKNALILFHANCGDLGIASELFDDSA 174
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
W++M SG A G EA+ LF EM + +T L C+ D RE +
Sbjct: 175 KAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLK-CKEMDSARELFD 233
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWAC 383
F+ E + + ++ G KEA M PD V +L+ AC
Sbjct: 234 RFT--------EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 384 KVHEDTERAERLMKQHLEMGVDDSGSYI 411
V D E +RL LE S Y+
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYV 313
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 216/418 (51%), Gaps = 23/418 (5%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAY---SLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
G++NY + P N + +++ + + SD F + ++GV A
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ---------SNGVKA 206
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF--------GSDCYIMNALIHMYSVFG 151
+ +L C R K GK HGF+ +GF G + + +LI MY+ G
Sbjct: 207 NETIMVD-LLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCG 265
Query: 152 DLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
DL AR LFD MP+R +VSW S+I G + EA+ +F ML+ G+ + T +SV+R
Sbjct: 266 DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX 271
A G +G+ +H V + ++ + AL++MYAK+G ESA
Sbjct: 326 ASMIQGCSQLGQSIHAYVSKTGFVK-DAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTI 384
Query: 272 XWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
WT +I GLASHG EA+ +F M E N PD T VL AC + LV E F++
Sbjct: 385 AWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAE 444
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
M+ +G+EPT++H+GC+VD+L+RAG +EAE + MP+KP+ +W L+ C +HE+ E
Sbjct: 445 MRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLE 504
Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
+R+ E SG Y+L SN+YA G+W++ +RE M K + K G S +E
Sbjct: 505 LTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 200/412 (48%), Gaps = 29/412 (7%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSP-SGDLNYARLLLTSNPALNSYYY 63
++ E QLH ++K N P S+L F P + +L+YAR + S + Y +
Sbjct: 18 SLVELNQLHGLMIKSSVIRNVIP--LSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIW 75
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
N+M+R YS S +P AL + MLR+ +PD FTFP+VLK C+ L+ + G
Sbjct: 76 NSMIRGYSNSPNPDK---ALIFYQEMLRKGY----SPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+HGF+ K GF + Y+ L+HMY G++ +F+ +P +VV+W SLI G V+++R
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE-------KKRIE 236
+AIE F M GV+ N+ +V +L AC + G+ HG ++ + ++
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVG 248
Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
++T+LIDMYAK G + +A W ++I+G + +G +EA+ +FL+M
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 297 ETCNVKPDERTMTAVLSA-----CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
+ PD+ T +V+ A C AY+ + K I + V++
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCAL------VNMY 362
Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
A+ G + A+ + K D + W +I H A + ++ E G
Sbjct: 363 AKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 413
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 218/405 (53%), Gaps = 38/405 (9%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY----------SVF 150
D T L C+ LK G++++ F+ F I NAL+ M+ +VF
Sbjct: 147 DEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVF 205
Query: 151 ---------------------GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
G + AR LF+R P +DVV WT++++G V +R EA+E
Sbjct: 206 DSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE 265
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
LF M AG+ ++ +VS+L CA +GAL G+ +HG + E R+ V TAL+DMY
Sbjct: 266 LFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN-RVTVDKVVGTALVDMY 324
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
AK GCIE+A WT++I GLA +G+ A+DL+ EME V+ D T
Sbjct: 325 AKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFV 384
Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
AVL+AC + V E +F M +R+ ++P +H C++DLL RAG L EAE+ ++ M
Sbjct: 385 AVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRG 444
Query: 370 KPDAVL---WRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNK 426
+ D L + +L+ A + + + + AER+ ++ ++ V DS ++ L ++VYAS +W +
Sbjct: 445 ESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDV 504
Query: 427 AEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD--YNHPEADNI 469
VR M G+ K PG S IE+DG HEF++GD +HP+ D I
Sbjct: 505 TNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEI 549
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 47/386 (12%)
Query: 52 LTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKC 111
L P+L YN ML++ + D L+LF + + + PDNFT P VLK
Sbjct: 5 LLQTPSL--LMYNKMLKSLA---DGKSFTKVLALFGELRGQGLY----PDNFTLPVVLKS 55
Query: 112 CARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSW 171
RL+ +G+++HG+ K G D Y+ N+L+ MY+ G + + ++FD MP RDVVSW
Sbjct: 56 IGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSW 115
Query: 172 TSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVK 230
LI V + R +AI +F RM E+ ++ ++ T+VS L AC+ L +G +++ V
Sbjct: 116 NGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV 175
Query: 231 EKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC---- 286
+ E + AL+DM+ K GC++ A WT+M+ G S G
Sbjct: 176 TE--FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEAR 233
Query: 287 ---------------------------KEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
EA++LF M+T ++PD + ++L+ C
Sbjct: 234 VLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTG 293
Query: 320 LVREAYMVFSDM-KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
+ + + + + R ++ + +VD+ A+ GC++ A + + + D W +
Sbjct: 294 ALEQGKWIHGYINENRVTVDKVVGT--ALVDMYAKCGCIETALEVFYEIKER-DTASWTS 350
Query: 379 LIWACKVHEDTERAERLMKQHLEMGV 404
LI+ ++ + RA L + +GV
Sbjct: 351 LIYGLAMNGMSGRALDLYYEMENVGV 376
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 7/218 (3%)
Query: 41 PSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP 100
+G ++ AR+L +P + + M+ Y AL LF M T G+ P
Sbjct: 225 STGRIDEARVLFERSPVKDVVLWTAMMNGYV---QFNRFDEALELFRCM---QTAGIR-P 277
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
DNF +L CA+ QGK +HG+I + D + AL+ MY+ G + A E+F
Sbjct: 278 DNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVF 337
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
+ +RD SWTSLI GL + A++L+ M GV ++ T V+VL AC G ++
Sbjct: 338 YEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVA 397
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
GRK+ + E+ ++ K + LID+ ++G ++ A
Sbjct: 398 EGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEA 435
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 150/364 (41%), Gaps = 38/364 (10%)
Query: 171 WTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVK 230
+ ++ L D + + LFG + G+ ++ T+ VL++ + G KVHG
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 231 EKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAI 290
K +E VS +L+ MYA G IE W +IS +G ++AI
Sbjct: 74 -KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAI 132
Query: 291 DLFLEM-ETCNVKPDERTMTAVLSAC---RNADLVREAY-MVFSDMKKRYGIEPTIQHFG 345
+F M + N+K DE T+ + LSAC +N ++ Y V ++ E +++
Sbjct: 133 GVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE------FEMSVRIGN 186
Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
+VD+ + GCL +A ++M K + W ++++ + A L ++ V
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEARVLFERS---PVK 242
Query: 406 DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV------DGALHEFVMG 459
D + N Y ++ E+ M G I+P + + GAL + G
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAG-IRPDNFVLVSLLTGCAQTGALEQ---G 298
Query: 460 DYNHPEADNIFVKLDE-----MVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLAL 514
+ H + V +D+ +VD K G EV EI + + A+ +L
Sbjct: 299 KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASW-------TSL 351
Query: 515 AYGL 518
YGL
Sbjct: 352 IYGL 355
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 225/442 (50%), Gaps = 21/442 (4%)
Query: 43 GDLNYARLLLTS--NPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP 100
GDL+ A+L+ + +N+M +AYS+ + F A L+ MLR P
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA---FDAFGLYCLMLREEFK----P 254
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D TF + C + QG+ +H +G D +N I MYS D AR LF
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
D M R VSWT +I G + EA+ LF M+++G + + T++S++ C G+L
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 221 MGR------KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
G+ ++G ++ I CN ALIDMY+K G I A WT
Sbjct: 375 TGKWIDARADIYGCKRDNVMI---CN---ALIDMYSKCGSIHEARDIFDNTPEKTVVTWT 428
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
MI+G A +G+ EA+ LF +M + KP+ T AVL AC ++ + + + F MK+
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQV 488
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
Y I P + H+ C+VDLL R G L+EA + + M KPDA +W L+ ACK+H + + AE+
Sbjct: 489 YNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQ 548
Query: 395 LMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALH 454
+ + + Y+ +N+YA+ G W A +R +M ++ + K PG S I+V+G H
Sbjct: 549 AAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNH 608
Query: 455 EFVMGDYNHPEADNIFVKLDEM 476
F +G++ H E + I+ L+ +
Sbjct: 609 SFTVGEHGHVENEVIYFTLNGL 630
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 10/269 (3%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N +R +DP SL +F R G P+NFTFPFV K CARL +
Sbjct: 20 WNLQIREAVNRNDPVE-----SLLLF--REMKRGGFEPNNFTFPFVAKACARLADVGCCE 72
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
+H + K F SD ++ A + M+ + A ++F+RMP+RD +W +++ G
Sbjct: 73 MVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
+A LF M + + TV++++++ + +L + +H V + ++ + V+
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHA-VGIRLGVDVQVTVA 191
Query: 243 TALIDMYAKSGCIESAXXXXXXXXX--XXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
I Y K G ++SA W +M + G +A L+ M
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFS 329
KPD T + ++C+N + + + ++ S
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHS 280
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 67/161 (41%), Gaps = 2/161 (1%)
Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
+ R L+ V +W I V+ + PVE++ LF M G E N+ T V +ACA
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
+ VH + K V TA +DM+ K ++ A W
Sbjct: 64 RLADVGCCEMVHAHLI-KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWN 122
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERT-MTAVLSA 314
AM+SG G +A LF EM + PD T MT + SA
Sbjct: 123 AMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSA 163
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 212/382 (55%), Gaps = 3/382 (0%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D + ++ C + R G H K GF SD Y+ ++L+ +Y G++ A ++F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
+ MP+R+VVSWT++I G R ++L+ +M ++ + ND T ++L AC SGAL
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
GR VH ++ ++S +LI MY K G ++ A W +MI+G
Sbjct: 239 QGRSVHCQTLHMG-LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 281 ASHGLCKEAIDLF-LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
A HGL +AI+LF L M KPD T VLS+CR+A LV+E F+ M + +G++P
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKP 356
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
+ H+ C+VDLL R G L+EA + + MPMKP++V+W +L+++C+VH D R ++
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEER 416
Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
L + D + +++ +N+YASVG W A VR+LM KGL PG S IE++ + F
Sbjct: 417 LMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAE 476
Query: 460 DYNHPEADNIFVKLDEMVDKLK 481
D ++ I L ++D ++
Sbjct: 477 DGSNCRMLEIVHVLHCLIDHME 498
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+++TF +L C QG+ +H MG S +I N+LI MY GDL A +
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGA 218
FD+ ++DVVSW S+I G H ++AIELF M+ ++G + + T + VL +C +G
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
+ GRK ++ E ++ + N + L+D+ + G ++ A
Sbjct: 339 VKEGRKFFNLMAEHG-LKPELNHYSCLVDLLGRFGLLQEA 377
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 238/456 (52%), Gaps = 13/456 (2%)
Query: 40 SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
S G + AR + +S P + N ++ YS ++ A+ LF ML R +
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE----EAVVLFQEMLTRGVN---- 626
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDC-YIMNALIHMYSVFGDLGVARE 158
P TF +++ C + + G Q HG ITK GF S+ Y+ +L+ MY + A
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 159 LFDRMPD-RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
LF + + +V WT ++ G + EA++ + M GV + AT V+VLR C+
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIE-SAXXXXXXXXXXXXXXWTAM 276
+L GR +H ++ + S LIDMYAK G ++ S+ W ++
Sbjct: 747 SLREGRAIHSLIFHLAH-DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
I+G A +G ++A+ +F M ++ PDE T VL+AC +A V + +F M +YG
Sbjct: 806 INGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYG 865
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
IE + H C+VDLL R G L+EA+DF+ A +KPDA LW +L+ AC++H D R E
Sbjct: 866 IEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISA 925
Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
++ +E+ +S +Y+L SN+YAS G W +R++M +G+ K PG S I+V+ H F
Sbjct: 926 EKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIF 985
Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKEG-YNPKLSE 491
GD +H E I + L+++ D +K + NP + E
Sbjct: 986 AAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPDIVE 1021
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 183/407 (44%), Gaps = 23/407 (5%)
Query: 3 VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPAL 58
V + L +HA+ +KLG ++N ++ ++L S + A + +
Sbjct: 340 VANLDLGLVVHAEAIKLGLASN--------IYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Query: 59 NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
N ++N M+R Y+ + + H + ++ + + D+FTF +L CA
Sbjct: 392 NDVFWNAMIRGYAHNGES----HKVMELFMDMKSSGYNI---DDFTFTSLLSTCAASHDL 444
Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
G Q H I K + ++ NAL+ MY+ G L AR++F+RM DRD V+W ++I
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
V + EA +LF RM G+ + A + S L+AC L G++VH + K ++
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH-CLSVKCGLDRD 563
Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
+ ++LIDMY+K G I+ A A+I+G + + L +EA+ LF EM T
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLT 622
Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG-CVVDLLARAGCL 357
V P E T ++ AC + + + KR G ++ G ++ + + +
Sbjct: 623 RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLGISLLGMYMNSRGM 681
Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
EA + + VLW ++ + E A + K+ GV
Sbjct: 682 TEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 122/321 (38%), Gaps = 51/321 (15%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N+ML YS P L F+ + P+ FTF VL CAR G+
Sbjct: 128 WNSMLSMYSSIGKPGK---VLRSFVSLFENQIF----PNKFTFSIVLSTCARETNVEFGR 180
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
Q+H + KMG + Y AL+ MY+ + AR +F+ + D + V WT L G V
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 240
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
P EA+ +F RM + G + V+V
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFVTV--------------------------------- 267
Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
I+ Y + G ++ A W MISG G AI+ F M +VK
Sbjct: 268 ---INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 303 PDERTMTAVLSA---CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
T+ +VLSA N DL +V + G+ I +V + ++ ++
Sbjct: 325 STRSTLGSVLSAIGIVANLDL----GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEA 380
Query: 360 AEDFMNAMPMKPDAVLWRTLI 380
A A+ K D V W +I
Sbjct: 381 AAKVFEALEEKND-VFWNAMI 400
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 114 RLKLA-RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWT 172
RL LA R GK +H +G S+ + NA++ +Y+ + A + FD + ++DV +W
Sbjct: 71 RLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWN 129
Query: 173 SLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEK 232
S++ +P + + F + E + N T VL CA + GR++H + K
Sbjct: 130 SMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI-K 188
Query: 233 KRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
+E AL+DMYAK I A WT + SG GL +EA+ +
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 293 FLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
F M +PD V++ +++A ++F +M P + + ++
Sbjct: 249 FERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHG 303
Query: 353 RAGCLKEA-EDFMN 365
+ GC A E F N
Sbjct: 304 KRGCETVAIEYFFN 317
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/563 (29%), Positives = 252/563 (44%), Gaps = 82/563 (14%)
Query: 89 MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF--------------- 133
M R+ P+ T + C+ LK+ QG ++H KMGF
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 134 ----------------GSDCYIMNALIHMYSVFGDLGVARELFDRMPD------------ 165
D Y N++I Y G G A ELF RM D
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458
Query: 166 ----------------------------RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
R+ +W +I G + + + EA+ELF +M +
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS 518
Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
N T++S+L ACA+ M R++HG V ++ ++ V AL D YAKSG IE
Sbjct: 519 RFMPNSVTILSLLPACANLLGAKMVREIHGCVL-RRNLDAIHAVKNALTDTYAKSGDIEY 577
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
+ W ++I G HG A+ LF +M+T + P+ T+++++ A
Sbjct: 578 SRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL 637
Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
V E VF + Y I P ++H +V L RA L+EA F+ M ++ + +W
Sbjct: 638 MGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWE 697
Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
+ + C++H D + A + + +++ + + S +YA K E +
Sbjct: 698 SFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNL 757
Query: 438 LIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEM--VDKLKKEGYNPKLSEVLLE 495
L KP G S IEV +H F GD + D ++ +++M +D + + YN +L
Sbjct: 758 LKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDN-RSDQYNGELW----- 811
Query: 496 IDDEEKATQLLHHSEKLALAYGLIRTSQGSK--IRIVKNLRSCEDCHEFMKLISKIYQRD 553
I++E + HSEK A+A+GLI +S SK IRI+KNLR C DCH+ K +SK Y D
Sbjct: 812 IEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCD 871
Query: 554 IIVRDRIRFHHFKNGDCSCKDYW 576
I++ D HHFKNGDCSCKDYW
Sbjct: 872 ILLEDTRCLHHFKNGDCSCKDYW 894
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 41/354 (11%)
Query: 27 PRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF 86
P F + + + G + AR + S N + ++ M+ AYS + LF
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSREN---RWREVAKLF 169
Query: 87 IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
M++ GV PD+F FP +L+ CA GK +H + K+G S + N+++ +
Sbjct: 170 RLMMK---DGV-LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAV 225
Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
Y+ G+L A + F RM +RDV++W S++ + + EA+EL M + G+ T
Sbjct: 226 YAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
++ G +G KC+ + L+ G
Sbjct: 286 NILI-----GGYNQLG---------------KCDAAMDLMQKMETFGITADV-------- 317
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
WTAMISGL +G+ +A+D+F +M V P+ T+ + +SAC ++ +
Sbjct: 318 ----FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
V S + + G + +VD+ ++ G L++A +++ K D W ++I
Sbjct: 374 VHS-IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK-DVYTWNSMI 425
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 10/264 (3%)
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD----RDVVSWTSLIDGLVDHDR 183
+ K G N LI Y+ G A +L +M DV +WT++I GL+ +
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
+A+++F +M AGV N T++S + AC+ ++ G +VH I + I+ V
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID-DVLVGN 391
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
+L+DMY+K G +E A W +MI+G G C +A +LF M+ N++P
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 304 DERTMTAVLSA-CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
+ T ++S +N D EA +F M+K ++ + ++ + G EA +
Sbjct: 452 NIITWNTMISGYIKNGD-EGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 363 FMNAMPMK---PDAVLWRTLIWAC 383
M P++V +L+ AC
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPAC 534
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 152/344 (44%), Gaps = 21/344 (6%)
Query: 104 TFPFVLKCCARLKLARQGKQLH---GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
T+ +L+ C G+ LH G T+ D ++ L+ MY+ G + AR++F
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARFGLFTE----PDVFVETKLLSMYAKCGCIADARKVF 138
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
D M +R++ +W+++I +R E +LF M++ GV +D +L+ CA+ G +
Sbjct: 139 DSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVE 198
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
G+ +H +V + C VS +++ +YAK G ++ A W +++
Sbjct: 199 AGKVIHSVVIKLGMSSC-LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAY 257
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
+G +EA++L EME + P T ++ A + M+ +GI
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITAD 316
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLIWACKVHEDTERAERLMK 397
+ + ++ L G +A D M + P+AV + + AC + + +
Sbjct: 317 VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 398 QHLEMG-VDDSGSYILASN----VYASVGKWSNKAEVRELMNKK 436
++MG +DD +L N +Y+ GK + +V + + K
Sbjct: 377 IAVKMGFIDD----VLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 11/284 (3%)
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH---GIVKE 231
D L + +EA + + + G +V +T + +L +C DSG++ +GR +H G+ E
Sbjct: 53 FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE 112
Query: 232 KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAID 291
V T L+ MYAK GCI A W+AMI + +E
Sbjct: 113 PDVF-----VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAK 167
Query: 292 LFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
LF M V PD+ +L C N V EA V + + G+ ++ ++ +
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDV-EAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS-GSY 410
A+ G L A F M + D + W +++ A + E A L+K+ + G+ ++
Sbjct: 227 AKCGELDFATKFFRRMRER-DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 411 ILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALH 454
+ Y +GK ++ + M G+ + + G +H
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 243/491 (49%), Gaps = 57/491 (11%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRN--FSK-LFTFAALSPSGD-----LNYARLLL--TS 54
T+ Q HAQ + G +ND +N F+ LF ++SPS ++YA + +
Sbjct: 16 TLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFIT 75
Query: 55 NPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCAR 114
NP+ ++ +NT++R +L H +LS F + VP PD TFPFV K CA
Sbjct: 76 NPS--TFCFNTIIRICTL-----HEPSSLSSKRFFVEMRRRSVP-PDFHTFPFVFKACAA 127
Query: 115 LKLARQG--KQLHGFITKMGFGSDCYIMNALIHMYSVFG--------------------- 151
K K LH + G SD + +N LI +YS+
Sbjct: 128 KKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYN 187
Query: 152 ----------DLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
++ ARELFD MP RD+VSW SLI G + EAI+LF M+ G++
Sbjct: 188 VLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKP 247
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
++ +VS L ACA SG G+ +H K +KR+ ++T L+D YAK G I++A
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTK-RKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
W AMI+GLA HG + +D F +M + +KPD T +VL C ++ LV
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM----KPDAVLWR 377
EA +F M+ Y + ++H+GC+ DLL RAG ++EA + + MP + + W
Sbjct: 367 DEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWS 426
Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNK-K 436
L+ C++H + E AE+ + + +D G Y + +YA+ +W +VRE++++ K
Sbjct: 427 GLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDK 486
Query: 437 GLIKPPGSSRI 447
+ K G S++
Sbjct: 487 KVKKNVGFSKV 497
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 213/420 (50%), Gaps = 36/420 (8%)
Query: 100 PDNFTFPFVLKCCARLKLARQ--GKQLHGFITKMGFGSD-CYIMNALIHMYSVFGDLGVA 156
P++ TF +L C + G LHG+ K+G + + A+I MYS G A
Sbjct: 69 PNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKA 128
Query: 157 R-------------------------------ELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
R ++FD+MP+RD++SWT++I+G V
Sbjct: 129 RLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQE 188
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
EA+ F M +GV+ + +++ L AC + GALS G VH V + + VS +L
Sbjct: 189 EALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD-FKNNVRVSNSL 247
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
ID+Y + GC+E A W ++I G A++G E++ F +M+ KPD
Sbjct: 248 IDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDA 307
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
T T L+AC + LV E F MK Y I P I+H+GC+VDL +RAG L++A +
Sbjct: 308 VTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQ 367
Query: 366 AMPMKPDAVLWRTLIWACKVH-EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
+MPMKP+ V+ +L+ AC H + AERLMK ++ V +Y++ SN+YA+ GKW
Sbjct: 368 SMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWE 427
Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
+++R M GL K PG S IE+D +H F+ GD H E I L+ + L+ +G
Sbjct: 428 GASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 104/251 (41%), Gaps = 45/251 (17%)
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD--SGALSMGRKV 225
VSWTS I+ L + R EA + F M AGVE N T +++L C D SG+ ++G +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAK-------------------------------SGC 254
HG + V TA+I MY+K SG
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 255 IESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
+++A WTAMI+G G +EA+ F EM+ VKPD + A L+A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 315 CRNA-----DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
C N L Y++ D K + ++ +DL R GC++ A M
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSL------IDLYCRCGCVEFARQVFYNME- 268
Query: 370 KPDAVLWRTLI 380
K V W ++I
Sbjct: 269 KRTVVSWNSVI 279
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 216/403 (53%), Gaps = 7/403 (1%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+ ++ A + GKQ+H + K GF S+ +MN+++ +Y G L A+ F
Sbjct: 214 YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHE 273
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
M D+D+++W +LI L D EA+ +F R G N T S++ ACA+ AL+ G
Sbjct: 274 MEDKDLITWNTLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCG 332
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMISGLA 281
+++HG + ++ ++ ALIDMYAK G I +S WT+M+ G
Sbjct: 333 QQLHGRIF-RRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
SHG EA++LF +M + ++PD AVLSACR+A LV + F+ M+ YGI P
Sbjct: 392 SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDR 451
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL-MKQHL 400
+ CVVDLL RAG + EA + + MP KPD W ++ ACK H+ RL ++ +
Sbjct: 452 DIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVM 511
Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
E+ G+Y++ S +YA+ GKW + A VR++M G K G S I V+ + F + D
Sbjct: 512 ELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKAT 503
P A +++ L ++++ ++ GY P+L + ++D+E T
Sbjct: 572 KMCPNASSVYSVLGLLIEETREAGYVPELDSL---VNDQEVGT 611
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 154/339 (45%), Gaps = 14/339 (4%)
Query: 143 LIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
LI Y G + AR LFD MPDRDVV+WT++I G + A E F M++ G N
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK-SGCIESAXXX 261
+ T+ SVL++C + L+ G VHG+V K +E V A+++MYA S +E+A
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVV-KLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
WT +I+G G + ++ +M N + +T + A + D V
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSV 229
Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
+ + + KR G + + ++DL R G L EA+ + + M K D + W TLI
Sbjct: 230 TTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWNTLIS 287
Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
+ + +E LM Q E Y S V A +N A + G I
Sbjct: 288 ELERSDSSE--ALLMFQRFESQGFVPNCYTFTSLVAAC----ANIAALNCGQQLHGRIFR 341
Query: 442 PGSSR-IEVDGALHEFVMGDYNHPEADNIFVKLDEMVDK 479
G ++ +E+ AL + N P++ +F E+VD+
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVF---GEIVDR 377
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 163/363 (44%), Gaps = 11/363 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G + AR L P + + M+ Y+ S+ ++ A F M+++ T +P+
Sbjct: 59 GLVEEARSLFDEMPDRDVVAWTAMITGYASSN---YNARAWECFHEMVKQGT----SPNE 111
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFG-DLGVARELFD 161
FT VLK C +K+ G +HG + K+G Y+ NA+++MY+ + A +F
Sbjct: 112 FTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFR 171
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
+ ++ V+WT+LI G + ++++ +ML EV + +RA A +++
Sbjct: 172 DIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTT 231
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
G+++H V K+ + V +++D+Y + G + A W +IS L
Sbjct: 232 GKQIHASVI-KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE 290
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
EA+ +F E+ P+ T T++++AC N + + + +R G +
Sbjct: 291 RSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-GFNKNV 348
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
+ ++D+ A+ G + +++ + + + V W +++ H A L + +
Sbjct: 349 ELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVS 408
Query: 402 MGV 404
G+
Sbjct: 409 SGI 411
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
++T LI Y + G +E A WTAMI+G AS A + F EM
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
P+E T+++VL +CRN ++ +V + K G+E ++ ++++ A EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK-LGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
+ + V W TLI D ++ KQ L
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQML 205
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 219/405 (54%), Gaps = 13/405 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD+ +R+L P ++ +N ++R+Y P A+ +++ M+R PD
Sbjct: 68 GDIFRSRIL-DQYPI--AFLWNNIMRSYIRHESP---LDAIQVYLGMVRSTV----LPDR 117
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
++ P V+K ++ GK+LH ++GF D + + I +Y G+ AR++FD
Sbjct: 118 YSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDE 177
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
P+R + SW ++I GL R EA+E+F M +G+E +D T+VSV +C G LS+
Sbjct: 178 NPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLA 237
Query: 223 RKVHGIVKEKKRIECKCNVS--TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
++H V + K E K ++ +LIDMY K G ++ A W++MI G
Sbjct: 238 FQLHKCVLQAK-TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGY 296
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
A++G EA++ F +M V+P++ T VLSAC + LV E F+ MK + +EP
Sbjct: 297 AANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPG 356
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
+ H+GC+VDLL+R G LKEA+ + MPMKP+ ++W L+ C+ D E AE + +
Sbjct: 357 LSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMV 416
Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
E+ + G Y++ +NVYA G W + VR+LM K + K P S
Sbjct: 417 ELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 242/465 (52%), Gaps = 34/465 (7%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPAL---NSY 61
T+ +A Q+HAQ++ G +N F KL PS + + L P + +
Sbjct: 20 TLIQAKQIHAQLVINGCHDNSL---FGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKF 76
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA--- 118
+NT+L+ S P S+ IF + + TF FVL CAR +
Sbjct: 77 LFNTLLKC----SKPED-----SIRIFANYASKSSLLYLNERTFVFVLGACARSASSSAL 127
Query: 119 RQGKQLHGFITKMGFGSDC-YIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
R G+ +HG + K+GF + I L+H Y+ GDL AR++FD MP+R V+W ++I G
Sbjct: 128 RVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 178 LVDHD-----RPVEAIELFGRM--LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVK 230
H +A+ LF R +GV D T+V VL A + +G L +G VHG ++
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 231 EKKRI-ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEA 289
+ E + TAL+DMY+K GC+ +A WT+M +GLA +G E
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNET 307
Query: 290 IDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVD 349
+L M +KP+E T T++LSA R+ LV E +F MK R+G+ P I+H+GC+VD
Sbjct: 308 PNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVD 367
Query: 350 LLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDD--- 406
LL +AG ++EA F+ AMP+KPDA+L R+L AC ++ +T E + K LE+ +D
Sbjct: 368 LLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKL 427
Query: 407 SGS----YILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
SGS Y+ SNV A GKW ++R+ M ++ + PG S +
Sbjct: 428 SGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 251/476 (52%), Gaps = 18/476 (3%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+HA++LKLG + N + + ++A D L + L S+ N+M+ +
Sbjct: 224 QVHAKVLKLGLQHEITICN-AMISSYADCGSVSDAKRVFDGLGGSKDLISW--NSMIAGF 280
Query: 71 SLSSDPTHHFH--ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
S H A LFI M R H V D +T+ +L C+ + GK LHG +
Sbjct: 281 S-----KHELKESAFELFIQMQR---HWVET-DIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 129 TKMGFGSDCYIMNALIHMYSVF--GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
K G NALI MY F G + A LF+ + +D++SW S+I G +
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
A++ F + + ++V+D ++LR+C+D L +G+++H + + + + +S+ LI
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISS-LI 450
Query: 247 DMYAKSGCIESAXX-XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
MY+K G IESA W AMI G A HGL + ++DLF +M NVK D
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
T TA+L+AC + L++E + + M+ Y I+P ++H+ VDLL RAG + +A++ +
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIE 570
Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
+MP+ PD ++ +T + C+ + E A ++ LE+ +D +Y+ S++Y+ + KW
Sbjct: 571 SMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEE 630
Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
KA V+++M ++G+ K PG S IE+ + F D ++P +I++ + ++ +++
Sbjct: 631 KASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 156/346 (45%), Gaps = 22/346 (6%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G L YA +L P +S +NTM+ Y+ A LF M R + D
Sbjct: 49 GFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLED---AWCLFTCMKRSGSD----VDG 101
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
++F +LK A +K G+Q+HG + K G+ + Y+ ++L+ MY+ + A E F
Sbjct: 102 YSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKE 161
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACADSGALSM 221
+ + + VSW +LI G V A L G M ++A V ++ T +L D ++
Sbjct: 162 ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNL 221
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX-XXXXXXXXXXWTAMISGL 280
++VH V K ++ + + A+I YA G + A W +MI+G
Sbjct: 222 LKQVHAKVL-KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGF 280
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD----MKKRYG 336
+ H L + A +LF++M+ V+ D T T +LSAC E + +F M + G
Sbjct: 281 SKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG-----EEHQIFGKSLHGMVIKKG 335
Query: 337 IEPTIQHFGCVVDLLAR--AGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+E ++ + + G +++A ++ K D + W ++I
Sbjct: 336 LEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK-DLISWNSII 380
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 119/275 (43%), Gaps = 3/275 (1%)
Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
H + K G SD Y+ N ++ Y FG LG A LFD MP RD VSW ++I G +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
+A LF M +G +V+ + +L+ A +G +VHG+V K EC V ++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI-KGGYECNVYVGSS 141
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKP 303
L+DMYAK +E A W A+I+G K A L ME V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
D T +L+ + V + + K G++ I ++ A G + +A+
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLK-LGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
+ + D + W ++I HE E A L Q
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ 295
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 192/322 (59%), Gaps = 2/322 (0%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM- 194
D +I Y+ G + A+ LFD+MP RDVV++ S++ G V + +EA+E+F M
Sbjct: 282 DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Query: 195 LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGC 254
E+ + +D T+V VL A A G LS +H + EK+ + ALIDMY+K G
Sbjct: 342 KESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQ-FYLGGKLGVALIDMYSKCGS 400
Query: 255 IESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
I+ A W AMI GLA HGL + A D+ L++E ++KPD+ T VL+A
Sbjct: 401 IQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNA 460
Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
C ++ LV+E + F M++++ IEP +QH+GC+VD+L+R+G ++ A++ + MP++P+ V
Sbjct: 461 CSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDV 520
Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
+WRT + AC H++ E E + K + + SY+L SN+YAS G W + VR +M
Sbjct: 521 IWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMK 580
Query: 435 KKGLIKPPGSSRIEVDGALHEF 456
++ + K PG S IE+DG +HEF
Sbjct: 581 ERKIEKIPGCSWIELDGRVHEF 602
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 162/367 (44%), Gaps = 28/367 (7%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLL--------TSNP 56
T + Q+H +++K G N + + FA+ ++AR + +
Sbjct: 24 TSDDVNQIHGRLIKTGIIKN-SNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGE 82
Query: 57 ALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLK 116
+ + +N +++++S DP L +GV D F+ VLK C+RL
Sbjct: 83 VEDPFLWNAVIKSHSHGKDPRQALLLLC------LMLENGVSV-DKFSLSLVLKACSRLG 135
Query: 117 LARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID 176
+ G Q+HGF+ K G SD ++ N LI +Y G LG++R++FDRMP RD VS+ S+ID
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 177 GLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
G V V A ELF M +E ++ +++S +D + + K+ + EK I
Sbjct: 196 GYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD--GVDIASKLFADMPEKDLI 253
Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
++ID Y K G IE A W MI G A G A LF +
Sbjct: 254 SW-----NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQ 308
Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
M +V M + + EA +FSDM+K + P V+ +A+ G
Sbjct: 309 MPHRDVVAYNSMMAGYVQNKYHM----EALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 356 CLKEAED 362
L +A D
Sbjct: 365 RLSKAID 371
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G +++A+ L P + YN+M+ Y + +H AL +F M + +H +P D+
Sbjct: 297 GFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK---YHMEALEIFSDM-EKESHLLP--DD 350
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T VL A+L + +H +I + F + ALI MYS G + A +F+
Sbjct: 351 TTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEG 410
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ ++ + W ++I GL H A ++ ++ ++ +D T V VL AC+ SG + G
Sbjct: 411 IENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
+++ K +IE + ++D+ ++SG IE A
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 506
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 217/421 (51%), Gaps = 10/421 (2%)
Query: 27 PRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF 86
P + + A SGD+ R + +S P + +N ML YS + H+ A+S F
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYS---NYEHYEEAISNF 404
Query: 87 IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
R+ PD T +L CARL+ GKQ+HG + + + +I++ LI +
Sbjct: 405 ----RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 147 YSVFGDLGVARELFDR-MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV-NDA 204
YS + ++ +FD + + D+ W S+I G + +A+ LF RM + V N+
Sbjct: 461 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 205 TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
+ +VL +C+ +L GR+ HG+V + + V TAL DMY K G I+SA
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS-DSFVETALTDMYCKCGEIDSARQFFDA 579
Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREA 324
W MI G +G EA+ L+ +M + KPD T +VL+AC ++ LV
Sbjct: 580 VLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Query: 325 YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACK 384
+ S M++ +GIEP + H+ C+VD L RAG L++AE A P K +VLW L+ +C+
Sbjct: 640 LEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCR 699
Query: 385 VHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGS 444
VH D A R+ ++ + + S +Y+L SN Y+S+ +W + A ++ LMNK + K PG
Sbjct: 700 VHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQ 759
Query: 445 S 445
S
Sbjct: 760 S 760
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY----------SVF------- 150
+L+C + GK +HGFI +MG SD Y+ N L+ +Y VF
Sbjct: 12 LLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRD 71
Query: 151 --------------GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE 196
GDLG A E+FD MP+RDVVSW ++I LV +A+ ++ RM+
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC 131
Query: 197 AGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI- 255
G + T+ SVL AC+ G + HG V K ++ V AL+ MYAK G I
Sbjct: 132 DGFLPSRFTLASVLSACSKVLDGVFGMRCHG-VAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
+ +TA+I GLA EA+ +F M V+ D ++ +LS
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 23/299 (7%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFG---DLGVA 156
P FT VL C+++ G + HG K G + ++ NAL+ MY+ G D GV
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGV- 194
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
+F+ + + VS+T++I GL ++ +EA+++F M E GV+V+ + ++L A
Sbjct: 195 -RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPR 253
Query: 217 GALSMGRKVHGIVKEKKRIEC---------KCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
+++G + K+I C +++ +L+++YAK+ + A
Sbjct: 254 EGCDSLSEIYG-NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE 312
Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
W MI G ++++ M +P+E T +VL AC + V +
Sbjct: 313 VNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI 372
Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA-EDF--MNAMPMKPDAVLWRTLIWAC 383
FS + +P++ + ++ + +EA +F M +KPD ++ +C
Sbjct: 373 FSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 202/382 (52%), Gaps = 2/382 (0%)
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
VP P+ TF + CA L G+QLH + +G + N+++ MYS G+L A
Sbjct: 306 VP-PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSA 364
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
LF M RD++SW+++I G E + F M ++G + D + S+L +
Sbjct: 365 SVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNM 424
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
+ GR+VH + +E V ++LI+MY+K G I+ A TAM
Sbjct: 425 AVIEGGRQVHALALCFG-LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAM 483
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
I+G A HG KEAIDLF + +PD T +VL+AC ++ + + F+ M++ Y
Sbjct: 484 INGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYN 543
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
+ P +H+GC+VDLL RAG L +AE +N M K D V+W TL+ ACK D ER R
Sbjct: 544 MRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAA 603
Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
++ LE+ + + + +N+Y+S G A VR+ M KG+IK PG S I++ + F
Sbjct: 604 ERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAF 663
Query: 457 VMGDYNHPEADNIFVKLDEMVD 478
V GD HP++++I+ L+ V
Sbjct: 664 VSGDRFHPQSEDIYNILELAVS 685
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 4/312 (1%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D +TF LK CA L+ + GK +H + GF + + N+L MY+ G++ LF
Sbjct: 208 DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLF 267
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
+ M +RDVVSWTSLI + V+A+E F +M + V N+ T S+ ACA L
Sbjct: 268 ENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLV 327
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
G ++H V + +VS +++ MY+ G + SA W+ +I G
Sbjct: 328 WGEQLHCNVLSLG-LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGY 386
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
G +E F M KP + + ++LS N ++ V + + +G+E
Sbjct: 387 CQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHA-LALCFGLEQN 445
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
++++ ++ G +KEA + D V +I H ++ A L ++ L
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETD-RDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 401 EMGV-DDSGSYI 411
++G DS ++I
Sbjct: 505 KVGFRPDSVTFI 516
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 16/347 (4%)
Query: 38 ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
+L +G+L AR + P + + ++++ Y +++ AL LF M R H V
Sbjct: 49 SLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDE---ALILFSAM-RVVDHAV 104
Query: 98 PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
+PD VLK C + G+ LH + K S Y+ ++L+ MY G + +
Sbjct: 105 -SPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
+F MP R+ V+WT++I GLV R E + F M + + T L+ACA
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
+ G+ +H V + + C V+ +L MY + G ++ WT++I
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLC-VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK---- 333
G +A++ F++M V P+E+T ++ SAC A L R +V+ +
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC--ASLSR---LVWGEQLHCNVL 337
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
G+ ++ ++ + + G L A M + D + W T+I
Sbjct: 338 SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTII 383
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 204/370 (55%), Gaps = 13/370 (3%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
AL LF M R PD TF VL C L+ +QGK++HG + G GS+ + +
Sbjct: 248 ALGLFYAMHRGKG---LVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
+L+ MY G + AR++F+ M ++ VSW++L+ G + +AIE+F M E +
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYC 364
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV--STALIDMYAKSGCIESAX 259
+VL+ACA A+ +G+++HG + R C NV +ALID+Y KSGCI+SA
Sbjct: 365 FG----TVLKACAGLAAVRLGKEIHG---QYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
W AM+S LA +G +EA+ F +M +KPD + A+L+AC +
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
+V E F M K YGI+P +H+ C++DLL RAG +EAE+ + + DA LW L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 380 IWACKVHEDTER-AERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
+ C + D R AER+ K+ +E+ SY+L SN+Y ++G+ + +R+LM ++G+
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Query: 439 IKPPGSSRIE 448
K G S I+
Sbjct: 598 AKTVGQSWID 607
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 192/442 (43%), Gaps = 19/442 (4%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
+V + +Q HA ++K G + N S L + L P + R + ++
Sbjct: 73 KVFSFIHGIQFHAHVVKSGLETDRNVGN-SLLSLYFKLGPG--MRETRRVFDGRFVKDAI 129
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+ +M+ Y + H AL +F+ M+ + G+ A + FT +K C+ L R G
Sbjct: 130 SWTSMMSGYVTGKE---HVKALEVFVEMV---SFGLDA-NEFTLSSAVKACSELGEVRLG 182
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
+ HG + GF + +I + L ++Y V + AR +FD MP+ DV+ WT+++ +
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 182 DRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
D EA+ LF M G+ + +T +VL AC + L G+++HG + I
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG-IGSNVV 301
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
V ++L+DMY K G + A W+A++ G +G ++AI++F EME
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME--- 358
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
+ D VL AC VR + +R G + ++DL ++GC+ A
Sbjct: 359 -EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDSA 416
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYAS 419
+ M ++ + + W ++ A + E A ++ G+ D S+I
Sbjct: 417 SRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGH 475
Query: 420 VGKWSNKAEVRELMNKKGLIKP 441
G LM K IKP
Sbjct: 476 TGMVDEGRNYFVLMAKSYGIKP 497
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 144/304 (47%), Gaps = 6/304 (1%)
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFG-DLGV 155
+PA + +L+ C ++ G Q H + K G +D + N+L+ +Y G +
Sbjct: 57 IPATPKL-YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRE 115
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
R +FD +D +SWTS++ G V V+A+E+F M+ G++ N+ T+ S ++AC++
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
G + +GR HG+V E +S+ L +Y + A WTA
Sbjct: 176 LGEVRLGRCFHGVVITHG-FEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTA 234
Query: 276 MISGLASHGLCKEAIDLFLEMETC-NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
++S + + L +EA+ LF M + PD T VL+AC N +++ + +
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
GI + ++D+ + G ++EA N M K ++V W L+ + + E+A
Sbjct: 295 -GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIE 352
Query: 395 LMKQ 398
+ ++
Sbjct: 353 IFRE 356
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 232/449 (51%), Gaps = 21/449 (4%)
Query: 6 MSEALQLHAQILKLGTSNND--APRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
+ + +H +K G +D AP S + +A L G + A+ + P NS +
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVAP---SLVEMYAQL---GTMESAQKVFDEIPVRNSVLW 178
Query: 64 NTMLRAY-SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+++ Y S DP +F L R T A D T ++K C + + GK
Sbjct: 179 GVLMKGYLKYSKDPE------VFRLFCLMRDTG--LALDALTLICLVKACGNVFAGKVGK 230
Query: 123 QLHGFITKMGF--GSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
+HG + F SD Y+ ++I MY L AR+LF+ DR+VV WT+LI G
Sbjct: 231 CVHGVSIRRSFIDQSD-YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAK 289
Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
+R VEA +LF +ML + N T+ ++L +C+ G+L G+ VHG + + IE
Sbjct: 290 CERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI-RNGIEMDAV 348
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
T+ IDMYA+ G I+ A W++MI+ +GL +EA+D F +M++ N
Sbjct: 349 NFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQN 408
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
V P+ T ++LSAC ++ V+E + F M + YG+ P +H+ C+VDLL RAG + EA
Sbjct: 409 VVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEA 468
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
+ F++ MP+KP A W L+ AC++H++ + A + ++ L M + S Y+L SN+YA
Sbjct: 469 KSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADA 528
Query: 421 GKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
G W VR M KG K G S EV
Sbjct: 529 GMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 187/393 (47%), Gaps = 13/393 (3%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPAL--N 59
+ T++ Q+HA+++ G + T A + S L++A P N
Sbjct: 16 QAKTLNHTQQVHAKVIIHGFEDEVV---LGSSLTNAYIQ-SNRLDFATSSFNRIPCWKRN 71
Query: 60 SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
+ +NT+L YS S T + + L +RR GV D+F F +K C L L
Sbjct: 72 RHSWNTILSGYSKS--KTCCYSDVLLLYNRMRRHCDGV---DSFNLVFAIKACVGLGLLE 126
Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
G +HG K G D Y+ +L+ MY+ G + A+++FD +P R+ V W L+ G +
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
+ + E LF M + G+ ++ T++ +++AC + A +G+ VHG+ + I+
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
+ ++IDMY K +++A WT +ISG A EA DLF +M
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
++ P++ T+ A+L +C + +R V M R GIE +F +D+ AR G ++
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYM-IRNGIEMDAVNFTSFIDMYARCGNIQM 365
Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
A + MP + + + W ++I A ++ E A
Sbjct: 366 ARTVFDMMPER-NVISWSSMINAFGINGLFEEA 397
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 119/297 (40%), Gaps = 6/297 (2%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP--D 165
+L ++ K +Q+H + GF + + ++L + Y L A F+R+P
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 166 RDVVSWTSLIDGLVDHDRPV--EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
R+ SW +++ G + + L+ RM V+ +V ++AC G L G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
+HG+ K ++ V+ +L++MYA+ G +ESA W ++ G +
Sbjct: 130 LIHGLAM-KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
E LF M + D T+ ++ AC N + V +R I+ +
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
++D+ + L A + + V+W TLI E A L +Q L
Sbjct: 249 QASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 213/408 (52%), Gaps = 11/408 (2%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVP-APD 101
GD++ AR + + ++ + M+ Y+ + ALSLF + GV P+
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE---ALSLF-----QKMKGVEIKPN 342
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
T VL C ++ G+ +HG K+G D + NAL+HMY+ A+ +F+
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFE 401
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
++D+V+W S+I G + EA+ LF RM V N TV S+ ACA G+L++
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 222 GRKVHGI-VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
G +H VK +V TAL+D YAK G +SA W+AMI G
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
G +++LF EM KP+E T T++LSAC + +V E FS M K Y P+
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
+H+ C+VD+LARAG L++A D + MP++PD + + C +H + E ++K+ L
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
++ DD+ Y+L SN+YAS G+W+ EVR LM ++GL K G S +E
Sbjct: 642 DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 199/432 (46%), Gaps = 22/432 (5%)
Query: 48 ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
ARL+ P + Y + MLR Y L+ + + L+ +++ HG D+ F
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVE---VVKLYDLLMK---HGFRY-DDIVFSK 147
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
LK C L+ GK++H + K+ D ++ L+ MY+ G++ A ++F+ + R+
Sbjct: 148 ALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRN 206
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
VV WTS+I G V +D E + LF RM E V N+ T +++ AC AL G+ HG
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+ K IE + T+L+DMY K G I +A WTAMI G +G
Sbjct: 267 CLV-KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSAC---RNADLVREAYMVFSDMKKRYGIEPTIQHF 344
EA+ LF +M+ +KP+ T+ +VLS C N +L R + + + GI T
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVH----GLSIKVGIWDT-NVA 380
Query: 345 GCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
+V + A+ ++A+ ++ M + D V W ++I + A L + V
Sbjct: 381 NALVHMYAKCYQNRDAK-YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 405 DDSGSYILA-SNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
+G + + + AS+G + + + K G + SS + V AL +F +
Sbjct: 440 TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFL---ASSSVHVGTALLDFYAKCGDP 496
Query: 464 PEADNIFVKLDE 475
A IF ++E
Sbjct: 497 QSARLIFDTIEE 508
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 174/401 (43%), Gaps = 16/401 (3%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
E+ + ++H Q++K+ + +N ++ + G++ A + N
Sbjct: 154 ELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMY-----AKCGEIKSAHKVFNDITLRNVV 208
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+ +M+ Y + +D L LF M G + +T+ ++ C +L QG
Sbjct: 209 CWTSMIAGY-VKNDLCEE--GLVLFNRMRENNVLG----NEYTYGTLIMACTKLSALHQG 261
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
K HG + K G ++ +L+ MY GD+ AR +F+ D+V WT++I G +
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
EA+ LF +M ++ N T+ SVL C L +GR VHG+ K NV
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL--SIKVGIWDTNV 379
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
+ AL+ MYAK A W ++ISG + +G EA+ LF M + +V
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG-CVVDLLARAGCLKEA 360
P+ T+ ++ SAC + + + + K + + H G ++D A+ G + A
Sbjct: 440 TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA 499
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
+ + K + + W +I DT + L ++ L+
Sbjct: 500 RLIFDTIEEK-NTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 4/259 (1%)
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
+Q HG +T G D I L+ +Y FG AR +FD++P+ D W ++ +
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
VE ++L+ +++ G +D L+AC + L G+K+H + + + V
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV--V 178
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
T L+DMYAK G I+SA WT+MI+G + LC+E + LF M NV
Sbjct: 179 LTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
+E T ++ AC + + F + GIE + ++D+ + G + A
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKW-FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNAR 297
Query: 362 DFMNAMPMKPDAVLWRTLI 380
N D V+W +I
Sbjct: 298 RVFNEHS-HVDLVMWTAMI 315
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/468 (30%), Positives = 227/468 (48%), Gaps = 16/468 (3%)
Query: 3 VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
+T++ ++ L A+ +L T + + +++F F L G + A + N
Sbjct: 2 ITSLRDSSLLVAESRELITHAKCSTESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVL 61
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+ +M+ Y L+ D + RR P D + ++ + + +
Sbjct: 62 WTSMINGYLLNKD-----------LVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEAR 110
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
L + D N ++ Y+ GD+ +FD MP+R+V SW LI G +
Sbjct: 111 SLFDQMP----CRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNG 166
Query: 183 RPVEAIELFGRMLEAGVEV-NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
R E + F RM++ G V NDAT+ VL ACA GA G+ VH + + NV
Sbjct: 167 RVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNV 226
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
ALIDMY K G IE A W MI+GLA+HG EA++LF EM+ +
Sbjct: 227 KNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGI 286
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
PD+ T VL AC++ LV + F+ M + I P I+H GCVVDLL+RAG L +A
Sbjct: 287 SPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAV 346
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
+F+N MP+K DAV+W TL+ A KV++ + E +++ +++ + ++++ SN+Y G
Sbjct: 347 EFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAG 406
Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNI 469
++ + A ++ M G K G S IE D L +F HP + +
Sbjct: 407 RFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEEL 454
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 222/408 (54%), Gaps = 15/408 (3%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGF---GSDCYIMNALIHMYSVFGDLGVAR 157
D T +L + L+ GKQ H F+ + G G + Y LI MYS G + +++
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY----LIDMYSKSGLIRISQ 473
Query: 158 ELFDR--MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
+LF+ +RD +W S+I G + + +F +MLE + N TV S+L AC+
Sbjct: 474 KLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQ 533
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
G++ +G+++HG ++ ++ V++AL+DMY+K+G I+ A +T
Sbjct: 534 IGSVDLGKQLHGF-SIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTT 592
Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
MI G HG+ + AI LFL M+ +KPD T AVLSAC + L+ E +F +M++ Y
Sbjct: 593 MILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVY 652
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD-AVLWRTLIWACKVHEDTERAER 394
I+P+ +H+ C+ D+L R G + EA +F+ + + + A LW +L+ +CK+H + E AE
Sbjct: 653 NIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAET 712
Query: 395 LMKQ--HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGA 452
+ ++ + G + SG +L SN+YA KW + +VR M +KGL K G S IE+ G
Sbjct: 713 VSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGY 772
Query: 453 LHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVL--LEIDD 498
++ FV D HP + I+ +D + ++ + + L V LE+D+
Sbjct: 773 VNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 172/365 (47%), Gaps = 14/365 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD+ +R + S N +NTM+ Y + +D ++ LF+ + D
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVY-VQNDCL--VESIELFLEAIGSKE---IVSDE 318
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T+ + L+ G+Q HGF++K I+N+L+ MYS G + + +F
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLS 378
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
M +RDVVSW ++I V + E + L M + G +++ TV ++L A ++ +G
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 223 RKVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX--XXXWTAMISG 279
++ H ++++ + E +++ LIDMY+KSG I + W +MISG
Sbjct: 439 KQTHAFLIRQGIQFE---GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISG 495
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
+G ++ +F +M N++P+ T+ ++L AC V + ++Y ++
Sbjct: 496 YTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQ 554
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
+ +VD+ ++AG +K AED M + + ++V + T+I H ERA L
Sbjct: 555 NVFVASALVDMYSKAGAIKYAED-MFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Query: 400 LEMGV 404
E G+
Sbjct: 614 QESGI 618
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 164/357 (45%), Gaps = 28/357 (7%)
Query: 59 NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
N +NT++ Y + + A F M+R P+P +F F +R
Sbjct: 178 NVVAWNTLISWYVKTG---RNAEACRQFGIMMRMEVK--PSPVSFVNVFPAVSISRS--I 230
Query: 119 RQGKQLHGFITKMG--FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID 176
++ +G + K+G + D +++++ I MY+ GD+ +R +FD +R++ W ++I
Sbjct: 231 KKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIG 290
Query: 177 GLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG--ALSMGRKVHGIVKEKKR 234
V +D VE+IELF + + V+D V +L A A S + +GR+ HG V + R
Sbjct: 291 VYVQNDCLVESIELFLEAIGSKEIVSDE-VTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 235 IECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFL 294
E + +L+ MY++ G + + W MIS +GL E + L
Sbjct: 350 -ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 295 EMETCNVKPDERTMTAVLSAC---RNADLVREAYMVFSDMKKRYGIEPTIQHFGC---VV 348
EM+ K D T+TA+LSA RN ++ ++ + I IQ G ++
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL--------IRQGIQFEGMNSYLI 460
Query: 349 DLLARAGCLKEAED-FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
D+ +++G ++ ++ F + + D W ++I + TE+ + ++ LE +
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNI 517
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N+M+ Y T + H F+ + R+ P+ T +L C+++ GK
Sbjct: 489 WNSMISGY------TQNGHTEKTFL-VFRKMLEQNIRPNAVTVASILPACSQIGSVDLGK 541
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
QLHGF + + ++ +AL+ MYS G + A ++F + +R+ V++T++I G H
Sbjct: 542 QLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHG 601
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
AI LF M E+G++ + T V+VL AC+ SG + G K+ ++E I+
Sbjct: 602 MGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHY 661
Query: 243 TALIDMYAKSGCIESA 258
+ DM + G + A
Sbjct: 662 CCITDMLGRVGRVNEA 677
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 155/351 (44%), Gaps = 21/351 (5%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G+ AR L + P + +NT++ + ++ P H LF +++ T D
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLP----HEALLFYSRMKK-TAPFTNCDA 107
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY-SVFG-----DLGVA 156
+T+ LK CA K + GK +H + + S + N+L++MY S + V
Sbjct: 108 YTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVV 167
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
R++FD M ++VV+W +LI V R EA FG M+ V+ + + V+V A + S
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 217 GALSMGRKVHGI-VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
++ +G+ +K V ++ I MYA+ G IES+ W
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 276 MISGLASHGLCKEAIDLFLE-METCNVKPDERTM---TAVLSACRNADLVREAYMVFSDM 331
MI + E+I+LFLE + + + DE T + +SA + +L R+ F
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ----FHGF 343
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
+ E I ++ + +R G + ++ +M + D V W T+I A
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER-DVVSWNTMISA 393
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 242/471 (51%), Gaps = 10/471 (2%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+HA +K N+ N S + +A D AR + A + +N M+ Y
Sbjct: 371 QVHAYTIKANLGNDSYVTN-SLIDMYAKCDCLTD---ARKVFDIFAAADVVLFNAMIEGY 426
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
S AL++F M R + P TF +L+ A L KQ+HG + K
Sbjct: 427 SRLGTQWELHEALNIFRDMRFR----LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
G D + +ALI +YS L +R +FD M +D+V W S+ G V EA+ L
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL 542
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
F + + ++ T +++ A + ++ +G++ H + K+ +EC ++ AL+DMYA
Sbjct: 543 FLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLL-KRGLECNPYITNALLDMYA 601
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
K G E A W ++IS A+HG K+A+ + +M + ++P+ T
Sbjct: 602 KCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVG 661
Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
VLSAC +A LV + F ++ R+GIEP +H+ C+V LL RAG L +A + + MP K
Sbjct: 662 VLSACSHAGLVEDGLKQF-ELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK 720
Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVR 430
P A++WR+L+ C + E AE + + DSGS+ + SN+YAS G W+ +VR
Sbjct: 721 PAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVR 780
Query: 431 ELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
E M +G++K PG S I ++ +H F+ D +H +A+ I+ LD+++ +++
Sbjct: 781 ERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 14/380 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G+++YARL+ + P ++ + TM+ S + +L LF ++ PD
Sbjct: 197 GNIDYARLVFDALPEKSTVTWTTMI---SGCVKMGRSYVSLQLFYQLMEDNV----VPDG 249
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+ VL C+ L GKQ+H I + G D +MN LI Y G + A +LF+
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
MP+++++SWT+L+ G + EA+ELF M + G++ + S+L +CA AL G
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG--- 279
+VH K + V+ +LIDMYAK C+ A + AMI G
Sbjct: 370 TQVHAYTI-KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
L + EA+++F +M ++P T ++L A + + + + M K YG+
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNL 487
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
I ++D+ + CLK++ + M +K D V+W ++ + E A L +
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYVQQSENEEALNLFLE- 545
Query: 400 LEMGVDDSGSYILASNVYAS 419
L++ + + A+ V A+
Sbjct: 546 LQLSRERPDEFTFANMVTAA 565
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 173/374 (46%), Gaps = 21/374 (5%)
Query: 12 LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
+H QI+ G + N S +G + YAR + P N ++TM+ A +
Sbjct: 66 VHGQIIVWGLELDTYLSNI----LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACN 121
Query: 72 LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK----QLHGF 127
H + SL +F+ T +P+ + ++ C+ L +G+ QL F
Sbjct: 122 -----HHGIYEESLVVFLEFWRTRK-DSPNEYILSSFIQACSGLD--GRGRWMVFQLQSF 173
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
+ K GF D Y+ LI Y G++ AR +FD +P++ V+WT++I G V R +
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 233
Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
++LF +++E V + + +VL AC+ L G+++H + + +E ++ LID
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL-RYGLEMDASLMNVLID 292
Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
Y K G + +A WT ++SG + L KEA++LF M +KPD
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYA 352
Query: 308 MTAVLSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
+++L++C + + V + +K G + + + ++D+ A+ CL +A +
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN--SLIDMYAKCDCLTDARKVFDI 410
Query: 367 MPMKPDAVLWRTLI 380
D VL+ +I
Sbjct: 411 FA-AADVVLFNAMI 423
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 8/285 (2%)
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+HG I G D Y+ N LI++YS G + AR++F++MP+R++VSW++++ H
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 184 PVEAIELFGRMLEAGVEV-NDATVVSVLRACADSGALSMGRKVHGIVKE---KKRIECKC 239
E++ +F + N+ + S ++AC SG GR + ++ K +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
V T LID Y K G I+ A WT MISG G ++ LF ++
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
NV PD ++ VLSAC + + + + RYG+E ++D + G +
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHI-LRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
A N MP K + + W TL+ K + + A L + G+
Sbjct: 303 AHKLFNGMPNK-NIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 211/423 (49%), Gaps = 27/423 (6%)
Query: 80 FHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYI 139
+ L LF+ MLR PD FTF +LK C L G ++H I K G S+ +
Sbjct: 465 YETLFLFVSMLRSRIE----PDEFTFGSILKACTGGSLG-YGMEIHSSIVKSGMASNSSV 519
Query: 140 MNALIHMYSVFGDLGVARELFDRMPDRD--------------------VVSWTSLIDGLV 179
+LI MYS G + A ++ R R VSW S+I G V
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
++ +A LF RM+E G+ + T +VL CA+ + +G+++H V KK ++
Sbjct: 580 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI-KKELQSDV 638
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
+ + L+DMY+K G + + W AMI G A HG +EAI LF M
Sbjct: 639 YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 698
Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
N+KP+ T ++L AC + L+ + F MK+ YG++P + H+ +VD+L ++G +K
Sbjct: 699 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 758
Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVH-EDTERAERLMKQHLEMGVDDSGSYILASNVYA 418
A + + MP + D V+WRTL+ C +H + E AE L + DS +Y L SNVYA
Sbjct: 759 ALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYA 818
Query: 419 SVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVD 478
G W +++R M L K PG S +E+ LH F++GD HP + I+ +L +
Sbjct: 819 DAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYS 878
Query: 479 KLK 481
++K
Sbjct: 879 EMK 881
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 170/410 (41%), Gaps = 35/410 (8%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
QLHA LK ++ A + T + ++ A++L ++ LN YN M+ Y
Sbjct: 302 QLHAHALK----SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
S H F AL LF R D + V + CA +K +G Q++G K
Sbjct: 358 S---QEEHGFKALLLF----HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
D + NA I MY L A +FD M RD VSW ++I + + E + L
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
F ML + +E ++ T S+L+AC G+L G ++H + K + +V +LIDMY+
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIV-KSGMASNSSVGCSLIDMYS 528
Query: 251 KSGCIESAXXXXXXXXXXXX--------------------XXWTAMISGLASHGLCKEAI 290
K G IE A W ++ISG ++A
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 291 DLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDL 350
LF M + PD+ T VL C N + + + K+ ++ + +VD+
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYICSTLVDM 647
Query: 351 LARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
++ G L ++ M ++ D V W +I H E A +L ++ +
Sbjct: 648 YSKCGDLHDSR-LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 24/320 (7%)
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
+ VL+ CA L R G QLH K F +D + A + MY+ ++ A+ LFD
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
+ + S+ ++I G + +A+ LF R++ +G+ ++ ++ V RACA LS G +
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
++G+ K + V+ A IDMY K + A W A+I+ +G
Sbjct: 404 IYGLAI-KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHF 344
E + LF+ M ++PDE T ++L AC L + S +K ++
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSV--- 519
Query: 345 GC-VVDLLARAGCLKEAEDF-------------------MNAMPMKPDAVLWRTLIWACK 384
GC ++D+ ++ G ++EAE M+ ++ V W ++I
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 385 VHEDTERAERLMKQHLEMGV 404
+ E +E A+ L + +EMG+
Sbjct: 580 MKEQSEDAQMLFTRMMEMGI 599
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 154/347 (44%), Gaps = 18/347 (5%)
Query: 40 SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
S S D+ A P + +N+ML Y + + ++ +F+ M R
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES---LKSIEVFVDMGREGIE---- 177
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
D TF +LK C+ L+ G Q+HG + ++G +D +AL+ MY+ + +
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F +P+++ VSW+++I G V ++ A++ F M + V+ + SVLR+CA L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
+G ++H K V TA +DMYAK ++ A + AMI+G
Sbjct: 298 RLGGQLHAHAL-KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
+ +A+ LF + + + DE +++ V AC + E ++ I+
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG-----LAIKS 411
Query: 340 TIQHFGCV----VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
++ CV +D+ + L EA + M + DAV W +I A
Sbjct: 412 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS-------- 148
V + F FV K CA+ GKQ H + GF +++N L+ +Y+
Sbjct: 43 VNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSA 102
Query: 149 --VF---------------------GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
VF D+ A F+ MP RDVVSW S++ G + + +
Sbjct: 103 SMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL 162
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV--ST 243
++IE+F M G+E + T +L+ C+ S+G ++HGIV R+ C +V ++
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV---VRVGCDTDVVAAS 219
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
AL+DMYAK + W+A+I+G + L A+ F EM+ N
Sbjct: 220 ALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279
Query: 304 DERTMTAVLSAC 315
+ +VL +C
Sbjct: 280 SQSIYASVLRSC 291
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 225/437 (51%), Gaps = 49/437 (11%)
Query: 50 LLLTSNPALNSYY-----YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
+LLTSN + S + YNT++R+Y + + + +L+LF ML P+N T
Sbjct: 36 VLLTSNALVASRWKTKCVYNTLIRSYLTTGE---YKTSLALFTHMLASHVQ----PNNLT 88
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD--- 161
FP ++K G LHG K GF D ++ + + Y GDL +R++FD
Sbjct: 89 FPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDIL 148
Query: 162 ----------------------------RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGR 193
RMP DVVSWT++I+G +A+ +FG
Sbjct: 149 NPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGE 208
Query: 194 MLE---AGVEVNDATVVSVLRACA--DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
M++ A + N+AT VSVL +CA D G + +G+++HG V K+ I + TAL+DM
Sbjct: 209 MIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTT-TLGTALLDM 267
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
Y K+G +E A W A+IS LAS+G K+A+++F M++ V P+ T+
Sbjct: 268 YGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITL 327
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
A+L+AC + LV +FS + Y I PT +H+GCVVDL+ RAG L +A +F+ ++P
Sbjct: 328 LAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLP 387
Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
+PDA + L+ ACK+HE+TE + KQ + + G Y+ S A WS +
Sbjct: 388 FEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEK 447
Query: 429 VRELMNKKGLIKPPGSS 445
+R+ M + G+ K P S
Sbjct: 448 MRKAMIEAGIRKIPAYS 464
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 8/224 (3%)
Query: 38 ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIF-MLRRPTHG 96
A +G+++YA P + + T++ +S HA +L +F + +
Sbjct: 161 ACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFS-----KKGLHAKALMVFGEMIQNERA 215
Query: 97 VPAPDNFTFPFVLKCCARLKLA--RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
V P+ TF VL CA R GKQ+HG++ + AL+ MY GDL
Sbjct: 216 VITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLE 275
Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
+A +FD++ D+ V +W ++I L + RP +A+E+F M + V N T++++L ACA
Sbjct: 276 MALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
S + +G ++ + + +I ++D+ ++G + A
Sbjct: 336 RSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDA 379
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 215/427 (50%), Gaps = 9/427 (2%)
Query: 45 LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
L AR + P + +N+M++ Y D L+ I RP+ T
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQT-------T 311
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
+L C+R + GK +HG++ + +D Y+ +LI +Y G+ +A +F +
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ 371
Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
SW +I + +A+E++ +M+ GV+ + T SVL AC+ AL G++
Sbjct: 372 KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQ 431
Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
+H + E R+E + +AL+DMY+K G + A WT MIS SHG
Sbjct: 432 IHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHF 344
+EA+ F EM+ +KPD T+ AVLSAC +A L+ E FS M+ +YGIEP I+H+
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY 550
Query: 345 GCVVDLLARAGCLKEAEDFMNAMPMKPD-AVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
C++D+L RAG L EA + + P D A L TL AC +H + +R+ + +E
Sbjct: 551 SCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENY 610
Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
DD+ +Y++ N+YAS W VR M + GL K PG S IE+ + F D +H
Sbjct: 611 PDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSH 670
Query: 464 PEADNIF 470
A+N++
Sbjct: 671 LRAENVY 677
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 167/359 (46%), Gaps = 12/359 (3%)
Query: 56 PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
P + +NT++ + S + AL LF R + G P++ + + C+RL
Sbjct: 169 PERDVASWNTVISCFYQSGEAEK---ALELFG---RMESSGFE-PNSVSLTVAISACSRL 221
Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI 175
+GK++H K GF D Y+ +AL+ MY L VARE+F +MP + +V+W S+I
Sbjct: 222 LWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 281
Query: 176 DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
G V +E+ RM+ G + T+ S+L AC+ S L G+ +HG V + +
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI-RSVV 340
Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
V+ +LID+Y K G A W MIS S G +A++++ +
Sbjct: 341 NADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQ 400
Query: 296 METCNVKPDERTMTAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
M + VKPD T T+VL AC A L + + S + R + + ++D+ ++
Sbjct: 401 MVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELL--LSALLDMYSKC 458
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
G KEA N++P K D V W +I A H A + + G+ G +LA
Sbjct: 459 GNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 10/268 (3%)
Query: 61 YYYNTMLRAYSLSSDPTHHFH-ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
Y +N+++ YS +S FH L +F +L + PD+FTFP V+K L
Sbjct: 72 YIWNSLMSGYSKNS----MFHDTLEVFKRLL---NCSICVPDSFTFPNVIKAYGALGREF 124
Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
G+ +H + K G+ D + ++L+ MY+ F + ++FD MP+RDV SW ++I
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
+A+ELFGRM +G E N ++ + AC+ L G+++H KK E
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV-KKGFELDE 243
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
V++AL+DMY K C+E A W +MI G + G K +++ M
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 300 NVKPDERTMTAVLSAC-RNADLVREAYM 326
+P + T+T++L AC R+ +L+ ++
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFI 331
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 7/274 (2%)
Query: 110 KCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DV 168
+C K R+ K +H I +G D + +LI++Y D AR +F+ R DV
Sbjct: 12 ECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDV 71
Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRKVHG 227
W SL+ G + + +E+F R+L + V D+ T +V++A G +GR +H
Sbjct: 72 YIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHT 131
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+V + + C V+++L+ MYAK E++ W +IS G +
Sbjct: 132 LVVKSGYV-CDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAE 190
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSAC-RNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
+A++LF ME+ +P+ ++T +SAC R L R + +KK + ++ +
Sbjct: 191 KALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN--SA 248
Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+VD+ + CL+ A + MP K V W ++I
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRK-SLVAWNSMI 281
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 197/346 (56%), Gaps = 2/346 (0%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
N LI+ Y G+L A LF++MP +D++SWT++I G + R EAI +F +M+E G+
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 1029
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
++ T+ +V+ ACA G L +G++VH + + + +AL+DMY+K G +E A
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV-LDVYIGSALVDMYSKCGSLERALL 1088
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
W ++I GLA+HG +EA+ +F +ME +VKP+ T +V +AC +A L
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
V E ++ M Y I ++H+G +V L ++AG + EA + + M +P+AV+W L+
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
C++H++ AE + + + +SG Y L ++YA +W + AE+R M + G+ K
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
Query: 441 P-PGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
PG+S I +D H F D +H +D + + LDE+ D++ GY
Sbjct: 1269 ICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGY 1314
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 8/242 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G+L A L P + + TM++ YS + + A+++F M+ G+ PD
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNK---RYREAIAVFYKMMEE---GI-IPDE 1032
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T V+ CA L + GK++H + + GF D YI +AL+ MYS G L A +F
Sbjct: 1033 VTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN 1092
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+P +++ W S+I+GL H EA+++F +M V+ N T VSV AC +G + G
Sbjct: 1093 LPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEG 1152
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMISGLA 281
R+++ + + I ++ +++K+G I E+ W A++ G
Sbjct: 1153 RRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCR 1212
Query: 282 SH 283
H
Sbjct: 1213 IH 1214
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 151/361 (41%), Gaps = 58/361 (16%)
Query: 45 LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
L+ A +T N + YN + + + S P +L L++ MLR +P ++T
Sbjct: 821 LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHP---IRSLELYVRMLRDSV----SPSSYT 873
Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
+ ++K + +R G+ L I K GFG I LI YS G + AR++FD MP
Sbjct: 874 YSSLVKASSFA--SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMP 931
Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
+RD ++WT T+VS R D +
Sbjct: 932 ERDDIAWT--------------------------------TMVSAYRRVLD---MDSANS 956
Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
+ + EK C LI+ Y G +E A WT MI G + +
Sbjct: 957 LANQMSEKNEATSNC-----LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNK 1011
Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV---REAYMVFSDMKKRYGIEPTI 341
+EAI +F +M + PDE TM+ V+SAC + ++ +E +M ++ + ++ I
Sbjct: 1012 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY--TLQNGFVLDVYI 1069
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
+VD+ ++ G L+ A +P K + W ++I H + A ++ + +E
Sbjct: 1070 G--SALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHGFAQEALKMFAK-ME 1125
Query: 402 M 402
M
Sbjct: 1126 M 1126
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 130/343 (37%), Gaps = 59/343 (17%)
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
Y N +SL P+HH S + + AP N ++K C+ KL
Sbjct: 745 YMNAFANVHSLRV-PSHHLRDFSASLSL---------APPNLKK--IIKQCSTPKLLESA 792
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
L I K DC +MN I + F L +A +M + +V + +L G V
Sbjct: 793 --LAAMI-KTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTC 849
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
P+ ++EL+ RML V + T S+++A + + + H I K K +
Sbjct: 850 SHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH-IWKFGFGFHVK--I 906
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
T LID Y+ +G I A WT M+S A L+M++ N
Sbjct: 907 QTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVS----------AYRRVLDMDSANS 956
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
++ M+ A N C+++ G L++AE
Sbjct: 957 LANQ--MSEKNEATSN----------------------------CLINGYMGLGNLEQAE 986
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
N MP+K D + W T+I ++ A + + +E G+
Sbjct: 987 SLFNQMPVK-DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 220/405 (54%), Gaps = 6/405 (1%)
Query: 79 HFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCY 138
H AL LF + ++ D +L+ + LK K++H I + G D
Sbjct: 468 HVEALELFRDVAKKRME----IDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTV 522
Query: 139 IMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG 198
I N L+ +Y ++G A +F+ + +DVVSWTS+I + EA+ELF RM+E G
Sbjct: 523 IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
+ + ++ +L A A AL+ GR++H + +K + +++ A++DMYA G ++SA
Sbjct: 583 LSADSVALLCILSAAASLSALNKGREIHCYLL-RKGFCLEGSIAVAVVDMYACCGDLQSA 641
Query: 259 XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
+T+MI+ HG K A++LF +M NV PD + A+L AC +A
Sbjct: 642 KAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHA 701
Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
L+ E M+ Y +EP +H+ C+VD+L RA C+ EA +F+ M +P A +W
Sbjct: 702 GLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCA 761
Query: 379 LIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
L+ AC+ H + E E ++ LE+ + G+ +L SNV+A G+W++ +VR M G+
Sbjct: 762 LLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGM 821
Query: 439 IKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
K PG S IE+DG +H+F D +HPE+ I+ KL E+ KL++E
Sbjct: 822 EKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 197/423 (46%), Gaps = 21/423 (4%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
+S+ QLH++I K S +F + G L+ A + P ++ +N
Sbjct: 95 AVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYG---KCGSLDDAEKVFDEMPDRTAFAWN 151
Query: 65 TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
TM+ AY + +P AL+L+ M GVP + +FP +LK CA+L+ R G +L
Sbjct: 152 TMIGAYVSNGEPAS---ALALYWNM---RVEGVPLGLS-SFPALLKACAKLRDIRSGSEL 204
Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDGLVDHDR 183
H + K+G+ S +I+NAL+ MY+ DL AR LFD ++ D V W S++ +
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
+E +ELF M G N T+VS L AC +G+++H V + + V
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
ALI MY + G + A W ++I G + + KEA++ F +M K
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384
Query: 304 DERTMTAVLSAC-RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
DE +MT++++A R ++L+ A M ++G + +Q ++D+ ++
Sbjct: 385 DEVSMTSIIAASGRLSNLL--AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 442
Query: 363 FMNAMPMKPDAVLWRTLIWA-----CKVHEDTERAERLMKQHLEMGVDDSGSYILASNVY 417
M K D + W T+I C V E E + K+ +E+ GS + AS+V
Sbjct: 443 AFLRMHDK-DLISWTTVIAGYAQNDCHV-EALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 418 ASV 420
S+
Sbjct: 501 KSM 503
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 6/280 (2%)
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKM--GFGSDCYIMNALIHMYSVFGDLGVARELFD 161
F +VL+ C + + QG+QLH I K F D ++ L+ MY G L A ++FD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
MPDR +W ++I V + P A+ L+ M GV + ++ ++L+ACA +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX-XXXXXXXXXXWTAMISGL 280
G ++H ++ K + AL+ MYAK+ + +A W +++S
Sbjct: 201 GSELHSLLV-KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
++ G E ++LF EM P+ T+ + L+AC + + + + K
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ ++ + R G + +AE + M D V W +LI
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 208/389 (53%), Gaps = 10/389 (2%)
Query: 59 NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
N +NTML+ Y H + LF R+ + D+ + V+ C+ +
Sbjct: 397 NKEAWNTMLKGYG---KMKCHVKCIELF----RKIQNLGIEIDSASATSVISSCSHIGAV 449
Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
GK LH ++ K ++N+LI +Y GDL VA +F D +V++W ++I
Sbjct: 450 LLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASY 508
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
V ++ +AI LF RM+ + + T+V++L AC ++G+L G+ +H + E + E
Sbjct: 509 VHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH-EMN 567
Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
++S ALIDMYAK G +E + W MISG HG + AI LF +ME
Sbjct: 568 LSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE 627
Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
+VKP T A+LSAC +A LV + +F M + Y ++P ++H+ C+VDLL+R+G L+
Sbjct: 628 SDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLE 686
Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYA 418
EAE + +MP PD V+W TL+ +C H + E R+ ++ + + G YI+ +N+Y+
Sbjct: 687 EAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYS 746
Query: 419 SVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
+ GKW RE+M + G+ K G S +
Sbjct: 747 AAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 61 YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+ +N++++A+ + D + +L F ML +PD+FT P V+ CA L
Sbjct: 91 FLWNSIIKAHFSNGD---YARSLCFFFSMLLSG----QSPDHFTAPMVVSACAELLWFHV 143
Query: 121 GKQLHGFITKM-GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
G +HG + K GF + + + ++ YS G L A +FD MPDRDVV+WT++I G V
Sbjct: 144 GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHV 203
Query: 180 DHDRPVEAIELFGRMLEAGVEV---NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIE 236
+ + +M AG +V N T+ +AC++ GAL GR +HG +
Sbjct: 204 QNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLAS 263
Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
K V +++ Y+KSG A WT++I+ LA G +E+ D+F EM
Sbjct: 264 SKF-VQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Query: 297 ETCNVKPDERTMTAVLS 313
+ + PD ++ +++
Sbjct: 323 QNKGMHPDGVVISCLIN 339
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 9/299 (3%)
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
V P+ T + C+ L ++G+ LHGF K G S ++ +++ YS G+ A
Sbjct: 225 VDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEA 284
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
F + D D+ SWTS+I L E+ ++F M G+ + + ++
Sbjct: 285 YLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKM 344
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX-XXXXXXXXXXWTA 275
+ G+ HG V + V +L+ MY K + A W
Sbjct: 345 MLVPQGKAFHGFVI-RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNT 403
Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
M+ G + I+LF +++ ++ D + T+V+S+C + V + + K
Sbjct: 404 MLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT- 462
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEA-EDFMNAMPMKPDAVLWRTLIWACKVH-EDTERA 392
++ TI ++DL + G L A F A + + W +I A VH E +E+A
Sbjct: 463 SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA---DTNVITWNAMI-ASYVHCEQSEKA 517
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 4/220 (1%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
V+ C L L K + I G + ++ + LI Y+ +G ++ +F + RD
Sbjct: 31 VILCDQSLSLESLRKH-NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRD 89
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
+ W S+I + ++ F ML +G + T V+ ACA+ +G VHG
Sbjct: 90 IFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHG 149
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+V + + V + + Y+K G ++ A WTA+ISG +G +
Sbjct: 150 LVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESE 209
Query: 288 EAIDLFLEMETCNV---KPDERTMTAVLSACRNADLVREA 324
+ +M + KP+ RT+ AC N ++E
Sbjct: 210 GGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG 249
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 207/406 (50%), Gaps = 12/406 (2%)
Query: 80 FHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYI 139
AL LF M+ + PD FT + C L GKQ+HG + + SD ++
Sbjct: 387 IQALGLFRQMVTQRIK----PDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFV 441
Query: 140 MNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV 199
N+LI MYS G + A +F+++ R VV+W S++ G + VEAI LF M + +
Sbjct: 442 QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYL 501
Query: 200 EVNDATVVSVLRACADSGALSMGRKVHG--IVKEKKRIECKCNVSTALIDMYAKSGCIES 257
E+N+ T ++V++AC+ G+L G+ VH I+ K + TALIDMYAK G + +
Sbjct: 502 EMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL----FTDTALIDMYAKCGDLNA 557
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
A W++MI+ HG AI F +M KP+E VLSAC +
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
+ V E F+ MK +G+ P +HF C +DLL+R+G LKEA + MP DA +W
Sbjct: 618 SGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWG 676
Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
+L+ C++H+ + + + ++ DD+G Y L SN+YA G+W +R M
Sbjct: 677 SLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSN 736
Query: 438 LIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
L K PG S IE+D + F G+ N + D I+ L + + +E
Sbjct: 737 LKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEE 782
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 181/373 (48%), Gaps = 17/373 (4%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
QLHA +L G D P +KL A S D +RL+ + P +S+ Y +++
Sbjct: 19 QLHAHLLVTGRLRRD-PLPVTKLIESYAFMGSPD--SSRLVFEAFPYPDSFMYGVLIKCN 75
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCA--RLKLARQGKQLHGFI 128
H L I + R F FP VL+ CA R L+ GK +HG I
Sbjct: 76 VWC-------HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGK-VHGRI 127
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
K G D I +L+ MY G+L A ++FD MP RD+V+W++L+ +++ V+A+
Sbjct: 128 IKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKAL 187
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
+F M++ GVE + T++SV+ CA+ G L + R VHG + +K + + +L+ M
Sbjct: 188 RMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT-RKMFDLDETLCNSLLTM 246
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
Y+K G + S+ WTAMIS ++A+ F EM ++P+ T+
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTL 306
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG-CVVDLLARAGCLKEAEDFMNAM 367
+VLS+C L+RE V +R ++P + +V+L A G L + E + +
Sbjct: 307 YSVLSSCGLIGLIREGKSVHGFAVRRE-LDPNYESLSLALVELYAECGKLSDCETVLRVV 365
Query: 368 PMKPDAVLWRTLI 380
+ + V W +LI
Sbjct: 366 SDR-NIVAWNSLI 377
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 203/424 (47%), Gaps = 20/424 (4%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
+S ++H +I+K G ++DA S L + +G+L+ A + P + ++T
Sbjct: 117 LSVGGKVHGRIIK-GGVDDDAVIETSLLCMYG---QTGNLSDAEKVFDGMPVRDLVAWST 172
Query: 66 MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
++ S + AL +F M+ GV PD T V++ CA L R + +H
Sbjct: 173 LV---SSCLENGEVVKALRMFKCMV---DDGVE-PDAVTMISVVEGCAELGCLRIARSVH 225
Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
G IT+ F D + N+L+ MYS GDL + +F+++ ++ VSWT++I +
Sbjct: 226 GQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSE 285
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
+A+ F M+++G+E N T+ SVL +C G + G+ VHG ++ ++S AL
Sbjct: 286 KALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL 345
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
+++YA+ G + W ++IS A G+ +A+ LF +M T +KPD
Sbjct: 346 VELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
T+ + +SAC NA LV + + + + +Q+ ++D+ +++G + A N
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFN 463
Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERA----ERLMKQHLEMGVDDSGSYILASNVYASV- 420
+ + V W +++ + ++ A + + +LEM + I A + S+
Sbjct: 464 QIKHR-SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 421 -GKW 423
GKW
Sbjct: 523 KGKW 526
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 159/548 (29%), Positives = 246/548 (44%), Gaps = 88/548 (16%)
Query: 12 LHAQILKLGTSNNDAPRNFSKLFTFAALSP-SGDLNYARLLLTSNPALNSYYYNTMLRAY 70
H Q++++G N N +L T L P +G + A L P N +N M++ +
Sbjct: 180 FHTQVIQIGLKENLHVVN--ELLT---LYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGF 234
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKC------------------- 111
S D A+ +F +M R PD T+ VL C
Sbjct: 235 SQEYDCES---AVKIFEWMQREEF----KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRM 287
Query: 112 ----------------CARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
CA L+ +++HG++ K GF NALIH+Y G +
Sbjct: 288 SGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKD 347
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE------------------- 196
A LF ++ ++ + SW SLI VD + EA+ LF + E
Sbjct: 348 AEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIK 407
Query: 197 --------------------AGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIE 236
+ V N T+ +L CA+ AL++GR++HG V E
Sbjct: 408 GCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE 467
Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
V AL++MYAK G + W ++I G HG ++A+ +F M
Sbjct: 468 -NILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM 526
Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
+ PD + AVLSAC +A LV + +F M KR+G+EP +H+ C+VDLL R G
Sbjct: 527 ISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGF 586
Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNV 416
LKEA + + MPM+P + L+ +C++H++ + AE + Q + + +GSY+L SN+
Sbjct: 587 LKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNI 646
Query: 417 YASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEM 476
Y++ G+W A VR L KK L K GSS IEV ++F G E + I+ L+++
Sbjct: 647 YSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDL 706
Query: 477 VDKLKKEG 484
V + K+G
Sbjct: 707 VSHMLKKG 714
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 159/426 (37%), Gaps = 86/426 (20%)
Query: 63 YNTMLRAYSLSSDPTHHFH--ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+N++L+A + +H + AL L+ M +R G D + P +L+ C L
Sbjct: 126 WNSILKA-----NVSHGLYENALELYRGMRQRGLTG----DGYILPLILRACRYLGRFGL 176
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
+ H + ++G + +++N L+ +Y G +G A LF MP R+ +SW +I G
Sbjct: 177 CRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQ 236
Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVL------------------------------ 210
A+++F M + ++ T SVL
Sbjct: 237 EYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEA 296
Query: 211 -----RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX 265
CA+ ALS+ KVHG V K E ALI +Y K G ++ A
Sbjct: 297 LAVFFSVCAELEALSIAEKVHGYVI-KGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 266 XXXXXXXWTAMISGLASHGLCKEAIDLFLEME----TCNVKPDERTMTAVLSACRNADLV 321
W ++I+ G EA+ LF E+E CNVK + T T+V+ C
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 322 REAYMVFSDMK----------------------------------KRYGIEPTIQHFGCV 347
++ F M+ R + I +
Sbjct: 416 DDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNAL 475
Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
V++ A+ G L E A+ K D + W ++I +H E+A + + + G
Sbjct: 476 VNMYAKCGLLSEGSLVFEAIRDK-DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPD 534
Query: 408 GSYILA 413
G ++A
Sbjct: 535 GIALVA 540
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
Query: 118 ARQGKQLHG--FITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD---RDVVSWT 172
A+Q +Q+H ++ F S N LI +Y+ G L AR +F+ + D+ W
Sbjct: 69 AQQCRQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRLWN 127
Query: 173 SLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEK 232
S++ V H A+EL+ M + G+ + + +LRAC G + R H V +
Sbjct: 128 SILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQI 187
Query: 233 KRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
E +V L+ +Y K+G + A W MI G + C+ A+ +
Sbjct: 188 GLKE-NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKI 246
Query: 293 FLEMETCNVKPDERTMTAVLS 313
F M+ KPDE T T+VLS
Sbjct: 247 FEWMQREEFKPDEVTWTSVLS 267
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 135/409 (33%), Positives = 206/409 (50%), Gaps = 21/409 (5%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
DL++ + +T + + Y N M++ A +F ML + P
Sbjct: 264 DLDFKKNEVTWSAMIGGYVENEMIK------------EAGEVFFQMLVNDNVAMVTP--V 309
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
+L CAR G+ +H + K GF D + N +I Y+ +G L A F +
Sbjct: 310 AIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEI 369
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
+DV+S+ SLI G V + RP E+ LF M +G+ + T++ VL AC+ AL G
Sbjct: 370 GLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Query: 224 KVHG--IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
HG +V CN AL+DMY K G ++ A W M+ G
Sbjct: 430 SCHGYCVVHGYAVNTSICN---ALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFG 486
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK-RYGIEPT 340
HGL KEA+ LF M+ V PDE T+ A+LSAC ++ LV E +F+ M + + + P
Sbjct: 487 IHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
I H+ C+ DLLARAG L EA DF+N MP +PD + TL+ AC +++ E + K+
Sbjct: 547 IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQ 606
Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
+G + + S +L SN Y++ +W + A +R + K+GL+K PG S ++V
Sbjct: 607 SLG-ETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 191/403 (47%), Gaps = 28/403 (6%)
Query: 12 LHAQILK--LGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLL--TSNPALNSYYYNTML 67
+H +LK L S++ N ++L+ + ++ AR + +P +N ++ M+
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNLTRLY-----ASCNEVELARHVFDEIPHPRINPIAWDLMI 75
Query: 68 RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
RAY+ S+D AL L+ ML P +T+PFVLK CA L+ GK +H
Sbjct: 76 RAYA-SNDFAEK--ALDLYYKMLNSGVR----PTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
+ F +D Y+ AL+ Y+ G+L +A ++FD MP RD+V+W ++I G H +
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDV 188
Query: 188 IELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
I LF M G+ N +T+V + A +GAL G+ VHG + V T ++
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT-RMGFSNDLVVKTGIL 247
Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM----ETCNVK 302
D+YAKS CI A W+AMI G + + KEA ++F +M V
Sbjct: 248 DVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVT 307
Query: 303 PDERTMTAVLSAC-RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
P + +L C R DL + +K + ++ T+Q+ ++ A+ G L +A
Sbjct: 308 P--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN--TIISFYAKYGSLCDAF 363
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
+ + +K D + + +LI C V+ E + RL + G+
Sbjct: 364 RQFSEIGLK-DVISYNSLITGCVVNCRPEESFRLFHEMRTSGI 405
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 189/352 (53%), Gaps = 4/352 (1%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+ T+ VL R+ GK +HG I K NALI MY L A +
Sbjct: 202 PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRV 261
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACADSGA 218
F + +D VSW S+I GLV +R EAI+LF M +G++ + + SVL ACA GA
Sbjct: 262 FGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA 321
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
+ GR VH + I+ ++ TA++DMYAK G IE+A W A++
Sbjct: 322 VDHGRWVHEYILTAG-IKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLG 380
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR-YGI 337
GLA HG E++ F EM KP+ T A L+AC + LV E F MK R Y +
Sbjct: 381 GLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNL 440
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED-TERAERLM 396
P ++H+GC++DLL RAG L EA + + AMP+KPD + ++ ACK E + ++
Sbjct: 441 FPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEIL 500
Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
L++ +DSG Y+L SN++A+ +W + A +R LM KG+ K PGSS IE
Sbjct: 501 DSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 201/400 (50%), Gaps = 28/400 (7%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDL-NYARLLLTS-NPALNSYYYNTMLR 68
Q+ Q++ +D N K+ TF L S D +Y+ ++L S L+S+ YNT+L
Sbjct: 24 QIQTQLITRDLLRDDLIIN--KVVTF--LGKSADFASYSSVILHSIRSVLSSFSYNTLLS 79
Query: 69 AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
+Y++ P A F+ ++G +PD FTFP V K C + R+GKQ+HG +
Sbjct: 80 SYAVCDKPRVTIFAYKTFV------SNGF-SPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
TKMGF D Y+ N+L+H Y V G+ A ++F MP RDVVSWT +I G EA+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
+ F +M VE N AT V VL + G LS+G+ +HG++ ++ + ALIDM
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL-ISLETGNALIDM 248
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN-VKPDERT 307
Y K + A W +MISGL KEAIDLF M+T + +KPD
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ---HFG-CVVDLLARAGCLKEAEDF 363
+T+VLSAC + V V Y + I+ H G +VD+ A+ G ++ A +
Sbjct: 309 LTSVLSACASLGAVDHGRWV-----HEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
N + K + W L+ +H + R ++ +++G
Sbjct: 364 FNGIRSK-NVFTWNALLGGLAIHGHGLESLRYFEEMVKLG 402
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 87 IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
+F L + + G+ PD VL CA L G+ +H +I G D +I A++ M
Sbjct: 292 LFSLMQTSSGIK-PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDM 350
Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
Y+ G + A E+F+ + ++V +W +L+ GL H +E++ F M++ G + N T
Sbjct: 351 YAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTF 410
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
++ L AC +G + GR+ +K ++ L GC
Sbjct: 411 LAALNACCHTGLVDEGRRYFHKMKSREY---------NLFPKLEHYGC------------ 449
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVRE 323
MI L GL EA++L M VKPD R A+LSAC+N + E
Sbjct: 450 ---------MIDLLCRAGLLDEALELVKAMP---VKPDVRICGAILSACKNRGTLME 494
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/477 (29%), Positives = 231/477 (48%), Gaps = 42/477 (8%)
Query: 42 SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
SG L AR++ S P + +NTM+ Y+ + H F RR G+ +
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGN----LHEALWFYKEFRRS--GIKF-N 178
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGS-------------------------- 135
F+F +L C + + + +Q HG + GF S
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 136 -----DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
D +I LI Y+ GD+ A +LF MP+++ VSWT+LI G V A++L
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
F +M+ GV+ T S L A A +L G+++HG + + + V ++LIDMY+
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI-RTNVRPNAIVISSLIDMYS 357
Query: 251 KSGCIESAXXXXXXXXXXXX-XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
KSG +E++ W MIS LA HGL +A+ + +M V+P+ T+
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
+L+AC ++ LV E F M ++GI P +H+ C++DLL RAGC KE + MP
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPF 477
Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEV 429
+PD +W ++ C++H + E ++ + +++ + S YIL S++YA GKW ++
Sbjct: 478 EPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKL 537
Query: 430 RELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEA--DNIFVKLDEMVDKLKKEG 484
R +M K+ + K S IE++ + F + D +H A + I+ L + +++E
Sbjct: 538 RGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEEEA 594
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 31/300 (10%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
+ Y N ++ Y G L AR +FD MP+RDVVSW +++ G EA+ +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIV-----KEKKRIEC-------KC---- 239
+G++ N+ + +L AC S L + R+ HG V + C KC
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 240 --------------NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
++ T LI YAK G +E+A WTA+I+G G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
A+DLF +M VKP++ T ++ L A + +R + M R + P
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNAIVIS 350
Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
++D+ +++G L+ +E K D V W T+I A H +A R++ ++ V
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 214/434 (49%), Gaps = 39/434 (8%)
Query: 46 NYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTF 105
+YA + + N +N M++ YSL P +LS F M R G+ A D +T+
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPP---LESLSFFSSMKSR---GIWA-DEYTY 105
Query: 106 PFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD 165
+LK C+ L R GK +HG + + GF I ++ +Y+ G +G A+++FD M +
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 166 RDVV-------------------------------SWTSLIDGLVDHDRPVEAIELFGRM 194
R+VV SW S+I L R EA+ELF M
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 195 LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGC 254
++ G + ++ATVV+VL A G L G+ +H + + V AL+D Y KSG
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 255 IESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLS 313
+E+A W +ISG A +G + IDLF M E V P+E T VL+
Sbjct: 286 LEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLA 345
Query: 314 ACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDA 373
C V +F M +R+ +E +H+G +VDL++R+G + EA F+ MP+ +A
Sbjct: 346 CCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANA 405
Query: 374 VLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELM 433
+W +L+ AC+ H D + AE + +++ +SG+Y+L SN+YA G+W + +VR LM
Sbjct: 406 AMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLM 465
Query: 434 NKKGLIKPPGSSRI 447
K L K G S I
Sbjct: 466 KKNRLRKSTGQSTI 479
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 201/388 (51%), Gaps = 9/388 (2%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD+ V CA L+ R G Q+HG + K G + ++ ++LI +YS G +A ++
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F M ++V+W S+I ++ P +I+LF ML G+ + ++ SVL A + + +L
Sbjct: 534 FTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
G+ +HG + I ++ ALIDMY K G + A W MI G
Sbjct: 594 LKGKSLHGYTL-RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYG 652
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
SHG C A+ LF EM+ PD+ T +++SAC ++ V E +F MK+ YGIEP
Sbjct: 653 YGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEP 712
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE----RAERL 395
++H+ +VDLL RAG L+EA F+ AMP++ D+ +W L+ A + H + E AE+L
Sbjct: 713 NMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKL 772
Query: 396 MKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHE 455
++ E G +Y+ N+Y G + A++ LM +KGL K PG S IEV +
Sbjct: 773 LRMEPERG----STYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNV 828
Query: 456 FVMGDYNHPEADNIFVKLDEMVDKLKKE 483
F G + P IF L+ + + E
Sbjct: 829 FFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 184/396 (46%), Gaps = 18/396 (4%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+H ++K+G N+ P + L + S G + A + + +N M+ AY
Sbjct: 293 QIHCDVVKMGLHND--PYVCTSLLSM--YSKCGMVGEAETVFSCVVDKRLEIWNAMVAAY 348
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ + + + AL LF FM ++ PD+FT V+ CC+ L L GK +H + K
Sbjct: 349 A---ENDYGYSALDLFGFMRQKSV----LPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
S I +AL+ +YS G A +F M ++D+V+W SLI GL + + EA+++
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 191 FGRML--EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
FG M + ++ + + SV ACA AL G +VHG + K + V ++LID+
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI-KTGLVLNVFVGSSLIDL 520
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
Y+K G E A W +MIS + + L + +IDLF M + + PD ++
Sbjct: 521 YSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSI 580
Query: 309 TAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
T+VL A + A L++ + R GI ++D+ + G K AE+ M
Sbjct: 581 TSVLVAISSTASLLKGKSL--HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
K + W +I+ H D A L + + G
Sbjct: 639 QHK-SLITWNLMIYGYGSHGDCITALSLFDEMKKAG 673
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 141/279 (50%), Gaps = 5/279 (1%)
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
+F L C++ + + G+Q+H + KMG +D Y+ +L+ MYS G +G A +F +
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
D+ + W +++ ++D A++LFG M + V + T+ +V+ C+ G + G+
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
VH + K+ I+ + +AL+ +Y+K GC A W ++ISGL +
Sbjct: 394 SVHAELF-KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 284 GLCKEAIDLFLEM--ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
G KEA+ +F +M + ++KPD MT+V +AC + +R V M K G+ +
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNV 511
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
++DL ++ G + A +M + + V W ++I
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI 549
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD- 161
FTFP +LK C+ L GK +HG + +G+ D +I +L++MY G L A ++FD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 162 ------RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
+ RDV W S+IDG R E + F RML GV + ++ V+
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 216 SGAL--SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG-CIESAXXXXXXXXXXXXXX 272
G G+++HG + + ++ + TALIDMY K G I++
Sbjct: 181 EGNFRREEGKQIHGFML-RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
W MI G G+C+ ++DL++ + +VK + T L AC ++
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSE 286
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 198/384 (51%), Gaps = 1/384 (0%)
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
T+ +L+ C + K +GK++H + +GF + Y+ L+ +Y++ GDL A LF +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
RD++ W ++I G V E + ++ M + + + T SV RAC+ L G+
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
+ H ++ K+ I+ V +AL+DMY K WT++ISG H
Sbjct: 230 RAHAVMI-KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
G E + F +M+ +P+ T VL+AC + LV + + F MK+ YGIEP QH
Sbjct: 289 GKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQH 348
Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
+ +VD L RAG L+EA +F+ P K +W +L+ AC++H + + E + LE+
Sbjct: 349 YAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELD 408
Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
+ G+Y++ +N YAS G ++VR M G+ K PG S+IE+ G +H F+ D +H
Sbjct: 409 PTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSH 468
Query: 464 PEADNIFVKLDEMVDKLKKEGYNP 487
++ I+ K+ EM Y P
Sbjct: 469 RLSEKIYKKVHEMTSFFMDIDYYP 492
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 15/298 (5%)
Query: 7 SEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTM 66
++ ++HAQ+ +G + N+ + KL ALS GDL A +L S + +N M
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLK--VKLLILYALS--GDLQTAGILFRSLKIRDLIPWNAM 180
Query: 67 LRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHG 126
+ Y LFI+ R VP D +TF V + C+ L GK+ H
Sbjct: 181 ISGYVQKG-----LEQEGLFIYYDMRQNRIVP--DQYTFASVFRACSALDRLEHGKRAHA 233
Query: 127 FITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
+ K S+ + +AL+ MY +FD++ R+V++WTSLI G H + E
Sbjct: 234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSE 293
Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
++ F +M E G N T + VL AC G + G + +K IE + A++
Sbjct: 294 VLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMV 353
Query: 247 DMYAKSGCIESAXXXXXXXX-XXXXXXWTAMISGLASHG---LCKEAIDLFLEMETCN 300
D ++G ++ A W +++ HG L + A FLE++ N
Sbjct: 354 DTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTN 411
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 260/516 (50%), Gaps = 47/516 (9%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
++T ++ ++H+ IL+ D + + +A + +A L+++ ++
Sbjct: 342 QLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIIS-- 399
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+N +L A++ D F F+ +L + D+ T +LK C ++ +
Sbjct: 400 -WNAILDAFA---DSPKQFQ----FLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 122 KQLHGFITKMGFGSD---CYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDG 177
K++HG+ K G D + NAL+ Y+ G++ A ++F + +R +VS+ SL+ G
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 178 LVD---HDR----------------------------PVEAIELFGRMLEAGVEVNDATV 206
V+ HD P EAI +F + G+ N T+
Sbjct: 512 YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTI 571
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
+++L CA +L + R+ HG + + + + L+D+YAK G ++ A
Sbjct: 572 MNLLPVCAQLASLHLVRQCHGYIIRGGLGDIR--LKGTLLDVYAKCGSLKHAYSVFQSDA 629
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
+TAM++G A HG KEA+ ++ M N+KPD +T +L+AC +A L+++
Sbjct: 630 RRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQ 689
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
++ ++ +G++PT++ + C VDL+AR G L +A F+ MP++P+A +W TL+ AC +
Sbjct: 690 IYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTY 749
Query: 387 EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
+ + L+ DD+G+++L SN+YA+ KW E+R LM KK + KP G S
Sbjct: 750 NRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSW 809
Query: 447 IEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKK 482
+EVDG + FV GD +HP D+IF ++ + ++K+
Sbjct: 810 LEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 8/289 (2%)
Query: 98 PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV-A 156
P P + TF VL C RL + GK +H +I K G D + NAL+ MY+ FG + A
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD- 215
FD + D+DVVSW ++I G +++ +A F ML+ E N AT+ +VL CA
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 216 --SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
+ A GR++H V ++ ++ V +L+ Y + G IE A W
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 274 TAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRN-ADLVREAYMVFSDM 331
+I+G AS+ +A LF + +V PD T+ ++L C DL + +
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ Y +E T ++ AR G A + M K D + W ++
Sbjct: 358 RHSYLLEDT-SVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAIL 404
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 171/409 (41%), Gaps = 54/409 (13%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G + A L T + + +N ++ Y+ + + F A LF ++ + G +PD+
Sbjct: 277 GRIEEAASLFTRMGSKDLVSWNVVIAGYASNCE---WFKAFQLFHNLVHK---GDVSPDS 330
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFG-SDCYIMNALIHMYSVFGDLGVARELFD 161
T +L CA+L GK++H +I + + D + NALI Y+ FGD A F
Sbjct: 331 VTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFS 390
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
M +D++SW +++D D + + + L +L + ++ T++S+L+ C + +
Sbjct: 391 LMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGK 450
Query: 222 GRKVHGIVKEKKRI--ECKCNVSTALIDMYAKSGCIE----------------------- 256
++VHG + + E + + AL+D YAK G +E
Sbjct: 451 VKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS 510
Query: 257 ---------SAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
A W+ M+ A EAI +F E++ ++P+ T
Sbjct: 511 GYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVT 570
Query: 308 MTAVLSAC---RNADLVRE--AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
+ +L C + LVR+ Y++ R G+ I+ G ++D+ A+ G LK A
Sbjct: 571 IMNLLPVCAQLASLHLVRQCHGYII------RGGL-GDIRLKGTLLDVYAKCGSLKHAYS 623
Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYI 411
+ + D V++ ++ VH + A + E + +I
Sbjct: 624 VFQS-DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFI 671
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 10/286 (3%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D+ F V+K CA + G+ LHG + K+G + + ++++MY+ + +++F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 161 DRMPDRDVVSWTSLIDGL-VDHDRPVEAIELFGRMLEAG-VEVNDATVVSVLRACADSGA 218
+M D V W ++ GL V R E + F M A + + T VL C G
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGD 137
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMI 277
G+ +H + K +E V AL+ MYAK G I A W A+I
Sbjct: 138 SYNGKSMHSYII-KAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD---LVREAYMVFSDMKKR 334
+G + + + +A F M +P+ T+ VL C + D R + S + +R
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQR 256
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
++ + +V R G ++EA M K D V W +I
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVI 301
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 226/444 (50%), Gaps = 24/444 (5%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYA-------RLLLTSNPALNSYYY 63
QLH ++K G + +P S L S G L YA +L + S+ A+ +
Sbjct: 259 QLHCCVVKSGLES--SPFAISALIDM--YSNCGSLIYAADVFHQEKLAVNSSVAV----W 310
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
N+ML + ++ + +++L + D++T LK C R G Q
Sbjct: 311 NSMLSGFLINEENEAA-------LWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+H + G+ D + + L+ +++ G++ A +LF R+P++D+++++ LI G V
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
A LF +++ G++ + V ++L+ C+ +L G+++HG+ KK E + +T
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCI-KKGYESEPVTAT 482
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
AL+DMY K G I++ WT +I G +G +EA F +M ++P
Sbjct: 483 ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP 542
Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
++ T +LSACR++ L+ EA MK YG+EP ++H+ CVVDLL +AG +EA +
Sbjct: 543 NKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANEL 602
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
+N MP++PD +W +L+ AC H++ + ++ L+ DD Y SN YA++G W
Sbjct: 603 INKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMW 662
Query: 424 SNKAEVRELMNKKGLIKPPGSSRI 447
++VRE K G K G S I
Sbjct: 663 DQLSKVREAAKKLG-AKESGMSWI 685
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 35/323 (10%)
Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV 168
L+ C +++ ++G+ + + K G + +I N +I MY F L A ++FD M +R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE-VNDATVVSVLRACADSGALSMGRKVHG 227
V+WT+++ G +P +AIEL+ RML++ E N+ +VL+AC G + +G V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+ K+ + + +++DMY K+G + A W +ISG GL
Sbjct: 132 RIG-KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 288 EAIDLFLEMETCNV------------KPDERTMTAVLSACRNADLVREAYMVFSDMKK-- 333
EA+ LF M NV K R + ++ R LV + + + +K
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREG-LVLDGFALPCGLKACS 249
Query: 334 ----------------RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA--MPMKPDAVL 375
+ G+E + ++D+ + G L A D + + + +
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 376 WRTLIWACKVHEDTERAERLMKQ 398
W +++ ++E+ E A L+ Q
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQ 332
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 206/516 (39%), Gaps = 63/516 (12%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRN--FSKLFTFAALSPSGDLNYARLLLTSNPALN 59
+V + A ++K G S N N S F LS A + N
Sbjct: 17 KVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSD------AHKVFDEMSERN 70
Query: 60 SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
+ TM+ Y+ P A+ L+ ML A + F + VLK C + +
Sbjct: 71 IVTWTTMVSGYTSDGKPNK---AIELYRRMLDSEEE---AANEFMYSAVLKACGLVGDIQ 124
Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDL-------------------------- 153
G ++ I K D +MN+++ MY G L
Sbjct: 125 LGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYC 184
Query: 154 --GVARE---LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
G+ E LF RMP +VVSW LI G VD P A+E RM G+ ++ +
Sbjct: 185 KAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPC 243
Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX---XXXXXX 265
L+AC+ G L+MG+++H V K +E +ALIDMY+ G + A
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVV-KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 266 XXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY 325
W +M+SG + + A+ L L++ ++ D T++ L C N +R
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
V S + G E +VDL A G +++A + +P K D + + LI C
Sbjct: 363 QVHS-LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVK 420
Query: 386 HEDTERAERLMKQHLEMGVDDSGSYILAS--NVYASVGKWSNKAEVRELMNKKGLIKPPG 443
A L ++ +++G+ D+ +I+++ V +S+ ++ L KKG P
Sbjct: 421 SGFNSLAFYLFRELIKLGL-DADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV 479
Query: 444 SSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDK 479
++ VD + E DN V D M+++
Sbjct: 480 TATALVDMYV--------KCGEIDNGVVLFDGMLER 507
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 156/368 (42%), Gaps = 16/368 (4%)
Query: 42 SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
+G ++ A L P N +N ++ + P AL F++R G+ D
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP----RALE---FLVRMQREGL-VLD 237
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
F P LK C+ L GKQLH + K G S + ++ALI MYS G L A ++F
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 162 R---MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
+ + V W S++ G + ++ A+ L ++ ++ + + T+ L+ C +
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
L +G +VH +V E V + L+D++A G I+ A ++ +I
Sbjct: 358 LRLGLQVHSLVVVSGY-ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIR 416
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN-ADLVREAYMVFSDMKKRYGI 337
G G A LF E+ + D+ ++ +L C + A L + +KK Y
Sbjct: 417 GCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYES 476
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
EP +VD+ + G + + M ++ D V W +I + E A R
Sbjct: 477 EPVTAT--ALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 398 QHLEMGVD 405
+ + +G++
Sbjct: 534 KMINIGIE 541
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 205/395 (51%), Gaps = 14/395 (3%)
Query: 56 PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
P N + +N ++ +S S + ++ LF+ M R PD+FT P +L+ C+
Sbjct: 94 PYRNIFSWNIIIGEFSRSGFASK---SIDLFLRMWRESC---VRPDDFTLPLILRACSAS 147
Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI 175
+ A+ G +H K+GF S ++ +AL+ MY G L AR+LFD MP RD V +T++
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 176 DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
G V + + +F M +G ++ +VS+L AC GAL G+ VHG +
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR--- 264
Query: 236 ECKC---NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
C C N+ A+ DMY K ++ A W+++I G G + L
Sbjct: 265 -CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKL 323
Query: 293 FLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
F EM ++P+ T VLSAC + LV ++++ F M++ Y I P ++H+ V D ++
Sbjct: 324 FDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMS 382
Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYIL 412
RAG L+EAE F+ MP+KPD + ++ CKV+ + E ER+ ++ +++ + Y+
Sbjct: 383 RAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVT 442
Query: 413 ASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
+ +Y++ G++ +R+ M +K + K PG S I
Sbjct: 443 LAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 111/281 (39%), Gaps = 5/281 (1%)
Query: 135 SDCYIMNALIHMYSVFGDL-GVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGR 193
S+ + + L+ YS L + +F MP R++ SW +I ++I+LF R
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 194 ML-EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKS 252
M E+ V +D T+ +LRAC+ S G +H ++ K VS+AL+ MY
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIH-VLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 253 GCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVL 312
G + A +TAM G G + +F EM D M ++L
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 313 SACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD 372
AC ++ V +R + + D+ + L A M + D
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCL-GLNLGNAITDMYVKCSILDYAHTVFVNMS-RRD 300
Query: 373 AVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
+ W +LI + D + +L + L+ G++ + L
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLG 341
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 228/412 (55%), Gaps = 17/412 (4%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
A+S+F+ M + P+ TF ++ + ++G ++HG K GF S+ + N
Sbjct: 356 AVSIFLNMRFDGVY----PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN 411
Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
+ I +Y+ F L A++ F+ + R+++SW ++I G + EA+++F L A E
Sbjct: 412 SFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF---LSAAAET 468
Query: 202 --NDATVVSVLRACADSGALSM--GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
N+ T SVL A A + +S+ G++ H + + C VS+AL+DMYAK G I+
Sbjct: 469 MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV-VSSALLDMYAKRGNIDE 527
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
+ WT++IS +SHG + ++LF +M NV PD T +VL+AC
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNR 587
Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
+V + Y +F+ M + Y +EP+ +H+ C+VD+L RAG LKEAE+ M+ +P P + +
Sbjct: 588 KGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQ 647
Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
+++ +C++H + + ++ + +EM + SGSY+ N+YA +W AE+R+ M KK
Sbjct: 648 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKN 707
Query: 438 LIKPPGSSRIEV---DGAL--HEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
+ K G S I+V +G+L F GD +HP++D I+ ++ + ++ EG
Sbjct: 708 VSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 12/295 (4%)
Query: 88 FMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY 147
F++R + GV D FT+ L C + G QL + K G SD + N+ I MY
Sbjct: 161 FVVRMKSAGV-VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMY 219
Query: 148 SVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR-PVEAIELFGRMLEAGVEVNDATV 206
S G AR +FD M +D++SW SL+ GL EA+ +F M+ GVE++ +
Sbjct: 220 SRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSF 279
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
SV+ C L + R++HG+ K+ E V L+ Y+K G +E+
Sbjct: 280 TSVITTCCHETDLKLARQIHGLCI-KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS 338
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
WT MIS +A+ +FL M V P+E T +++A + + ++E
Sbjct: 339 ERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Query: 327 VFSD-MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ +K + EP++ + + L A+ L++A+ + + + + W +I
Sbjct: 394 IHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFR-EIISWNAMI 445
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 9/285 (3%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D T LK C R L R G Q+HGF T GF S + NA++ MY G A +F
Sbjct: 77 DEVTLCLALKAC-RGDLKR-GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
+ + D DVVSW +++ G D+ A+ RM AGV + T + L C S
Sbjct: 135 ENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
+G ++ V K +E V + I MY++SG A W +++SGL
Sbjct: 192 LGLQLQSTVV-KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL 250
Query: 281 ASHG-LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
+ G EA+ +F +M V+ D + T+V++ C + ++ A + KR G E
Sbjct: 251 SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR-GYES 309
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACK 384
++ ++ ++ G L+ + + M + + V W T+I + K
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMSER-NVVSWTTMISSNK 353
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 189/365 (51%), Gaps = 2/365 (0%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D +L+ L + G+ +HG++ + G + + +L+ MY+ G + VA +F
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF 275
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
RM + VSW SLI G + +A E M G + + T+V VL AC+ G+L
Sbjct: 276 SRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLK 335
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
GR VH + ++ ++ +TAL+DMY+K G + S+ W MIS
Sbjct: 336 TGRLVHCYILKRHVLDRV--TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCY 393
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
HG +E + LFL+M N++PD T ++LSA ++ LV + FS M +Y I+P+
Sbjct: 394 GIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPS 453
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
+H+ C++DLLARAG ++EA D +N+ + +W L+ C H + + + L
Sbjct: 454 EKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKIL 513
Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
++ D G L SN +A+ KW A+VR+LM + K PG S IEV+G L F+M D
Sbjct: 514 QLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMED 573
Query: 461 YNHPE 465
+H E
Sbjct: 574 LSHHE 578
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 184/395 (46%), Gaps = 14/395 (3%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+HA ++ G N + + + A+ G+++YAR + P YN+M+ Y
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLI---ASCGRIGEISYARKVFDELPQRGVSVYNSMIVVY 91
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
S +P L L+ M+ PD+ TF +K C + +G+ +
Sbjct: 92 SRGKNPDE---VLRLYDQMIAEKIQ----PDSSTFTMTIKACLSGLVLEKGEAVWCKAVD 144
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
G+ +D ++ ++++++Y G + A LF +M RDV+ WT+++ G + ++A+E
Sbjct: 145 FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
+ M G + ++ +L+A D G MGR VHG + + + V T+L+DMYA
Sbjct: 205 YREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY-RTGLPMNVVVETSLVDMYA 263
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
K G IE A W ++ISG A +GL +A + +EM++ +PD T+
Sbjct: 264 KVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVG 323
Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
VL AC ++ +V + KR+ ++ ++D+ ++ G L + + + K
Sbjct: 324 VLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT--ALMDMYSKCGALSSSREIFEHVGRK 381
Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
D V W T+I +H + + L + E ++
Sbjct: 382 -DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIE 415
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 216/395 (54%), Gaps = 8/395 (2%)
Query: 91 RRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVF 150
RR +P + ++ ++ A+ + QL + + F S N +I +
Sbjct: 222 RRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRN 277
Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-VEVNDATVVSV 209
++ A LFDRMP+++V+SWT++I G V++ EA+ +F +ML G V+ N T VS+
Sbjct: 278 REMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX--X 267
L AC+D L G+++H ++ + + + V++AL++MY+KSG + +A
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEI-VTSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
W +MI+ A HG KEAI+++ +M KP T +L AC +A LV +
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
F D+ + + +H+ C+VDL RAG LK+ +F+N + + ++ AC VH
Sbjct: 457 FKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHN 516
Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
+ A+ ++K+ LE G DD+G+Y+L SN+YA+ GK AE+R M +KGL K PG S +
Sbjct: 517 EVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576
Query: 448 EVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKK 482
+V H FV+GD +HP+ + + L ++ +K++K
Sbjct: 577 KVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRK 611
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 8/212 (3%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
++N A L P N + TM+ Y + + AL++F MLR G P+
Sbjct: 279 EMNKACGLFDRMPEKNVISWTTMITGYV---ENKENEEALNVFSKMLR---DGSVKPNVG 332
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR- 162
T+ +L C+ L +G+Q+H I+K + + +AL++MYS G+L AR++FD
Sbjct: 333 TYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNG 392
Query: 163 -MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
+ RD++SW S+I H EAIE++ +M + G + + T +++L AC+ +G +
Sbjct: 393 LVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEK 452
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSG 253
G + + + + + T L+D+ ++G
Sbjct: 453 GMEFFKDLVRDESLPLREEHYTCLVDLCGRAG 484
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
G + AR+LFD +P+RDVV+WT +I G + EA ELF R+ N T +++
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMV 116
Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
S LS+ + + E+ + +ID YA+SG I+ A
Sbjct: 117 SGYLRSKQLSIAEMLFQEMPERNVVSW-----NTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
W +M+ L G EA++LF M + D + TA++ V EA +F
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
M +R I + ++ A+ + EA+ MP + D W T+I
Sbjct: 228 MPER-----NIISWNAMITGYAQNNRIDEADQLFQVMPER-DFASWNTMI 271
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
N +I Y+ G + A ELFD MP+R++VSW S++ LV R EA+ LF RM V
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV- 202
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
+ +++ A +G + R++ + E+ I A+I YA++ I+ A
Sbjct: 203 ---VSWTAMVDGLAKNGKVDEARRLFDCMPERNIISW-----NAMITGYAQNNRIDEADQ 254
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
W MI+G + +A LF M NV +T + N
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKEN--- 311
Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
EA VFS M + ++P + G V +L+
Sbjct: 312 -EEALNVFSKMLRDGSVKPNV---GTYVSILS 339
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 129/301 (42%), Gaps = 33/301 (10%)
Query: 91 RRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVF 150
R+ G+P D T+ V+ +L R+ ++L ++ + A++ Y
Sbjct: 66 RKLFDGLPERDVVTWTHVITGYIKLGDMREAREL---FDRVDSRKNVVTWTAMVSGYLRS 122
Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
L +A LF MP+R+VVSW ++IDG R +A+ELF M E + + S++
Sbjct: 123 KQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMV 178
Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVS-TALIDMYAKSGCIESAXXXXXXXXXXX 269
+A G + + +R+ + VS TA++D AK+G ++ A
Sbjct: 179 KALVQRGRIDEAMNLF------ERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFS 329
W AMI+G A + EA LF M + +T + RN ++ +A +F
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFI---RNREM-NKACGLFD 288
Query: 330 DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM-------PMKPDAVLWRTLIWA 382
M ++ I T G V + KE E+ +N +KP+ + +++ A
Sbjct: 289 RMPEKNVISWTTMITGYVEN--------KENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Query: 383 C 383
C
Sbjct: 341 C 341
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 187/340 (55%), Gaps = 8/340 (2%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD FTFP VLK C + + G+ +H + K GFG D Y++NAL+ MY+ GD+ AR +
Sbjct: 193 PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNV 252
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
FD +P +D VSW S++ G + H EA+++F M++ G+E + + SVL A +
Sbjct: 253 FDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSF 309
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
GR++HG V ++ +E + +V+ ALI +Y+K G + A W A+IS
Sbjct: 310 KHGRQLHGWVI-RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS- 367
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
+H + F +M N KPD T +VLS C N +V + +FS M K YGI+P
Sbjct: 368 --AHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFM-NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
++H+ C+V+L RAG ++EA + M ++ +W L++AC +H +T+ E ++
Sbjct: 426 KMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQR 485
Query: 399 HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
E+ D+ ++ L +Y+ + + VR++M +GL
Sbjct: 486 LFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 161/350 (46%), Gaps = 14/350 (4%)
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
G+ + F +L+ C L+ G ++H I ++ I + L+ +Y+ G V
Sbjct: 86 GISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEV 145
Query: 156 ARELFDRMPDRDV--VSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
A E+FDRM RD +W SLI G + + +A+ L+ +M E GV+ + T VL+AC
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 214 ADSGALSMGRKVH-GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
G++ +G +H +VKE V AL+ MYAK G I A
Sbjct: 206 GGIGSVQIGEAIHRDLVKEG--FGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
W +M++G HGL EA+D+F M ++PD+ +++VL+ + R+ +
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLH----GWV 319
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
R G+E + ++ L ++ G L +A + M ++ D V W +I A H
Sbjct: 320 IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISA---HSKNSNG 375
Query: 393 ERLMKQ-HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
+ +Q H D +++ ++ A+ G + + LM+K+ I P
Sbjct: 376 LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 175/341 (51%), Gaps = 2/341 (0%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L C + G LHG+ K G + ++N LI MYS F D+ LF+++ +
Sbjct: 353 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP 412
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRKVH 226
++SW S+I G V R A E+F +M+ G + DA T+ S+L C+ L++G+++H
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH 472
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC 286
G + E + V TALIDMYAK G A W +MISG + GL
Sbjct: 473 GYTL-RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQ 531
Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
A+ +LEM +KPDE T VLSAC + V E + F M K +GI PT+QH+
Sbjct: 532 HRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYAL 591
Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDD 406
+V LL RA EA + M +KPD+ +W L+ AC +H + E E + ++ + +
Sbjct: 592 MVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKN 651
Query: 407 SGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
G Y+L SN+YA+ W + VR +M G G S+I
Sbjct: 652 GGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 148/327 (45%), Gaps = 25/327 (7%)
Query: 62 YYNTMLRAY---SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL--K 116
Y++++L++ +SS P +++F +LR P++FT L+
Sbjct: 15 YFHSLLKSCIHGEISSSP------ITIFRDLLRSSL----TPNHFTMSIFLQATTTSFNS 64
Query: 117 LARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID 176
Q +Q+ +TK G Y+ +L+++Y G + A+ LFD MP+RD V W +LI
Sbjct: 65 FKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 177 GLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIE 236
G + +A +LF ML+ G + T+V++L C G +S GR VHG V K +E
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHG-VAAKSGLE 183
Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
V ALI Y+K + SA W MI + GL +EAI +F M
Sbjct: 184 LDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
NV+ T+ +LSA ++ + + G+ I +V +R GC
Sbjct: 244 FEKNVEISPVTIINLLSA-------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGC 296
Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWAC 383
L AE + K D+++ T I +C
Sbjct: 297 LVSAERLYAS--AKQDSIVGLTSIVSC 321
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 14/277 (5%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G + A++L P ++ +N ++ YS + + A LFI ML++ +P
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNG---YECDAWKLFIVMLQQGF----SPSA 151
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T +L C + QG+ +HG K G D + NALI YS +LG A LF
Sbjct: 152 TTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
M D+ VSW ++I EAI +F M E VE++ T++++L A L
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCL 271
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
G+V + +V T+L+ Y++ GC+ SA T+++S A
Sbjct: 272 VVKCGMVND-------ISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAE 324
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
G A+ F + +K D + +L C+ +
Sbjct: 325 KGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 361
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 163/405 (40%), Gaps = 38/405 (9%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
+S+ +H K G + +N L +F S +L A +L ++ +NT
Sbjct: 167 VSQGRSVHGVAAKSGLELDSQVKN--ALISF--YSKCAELGSAEVLFREMKDKSTVSWNT 222
Query: 66 MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
M+ AYS S A+++F M + P + L + LH
Sbjct: 223 MIGAYSQSGLQE---EAITVFKNMFEKNVEISP----------VTIINLLSAHVSHEPLH 269
Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
+ K G +D ++ +L+ YS G L A L+ +V TS++ +
Sbjct: 270 CLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMD 329
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
A+ F + + ++++ +V +L C S + +G +HG K + K V L
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAI-KSGLCTKTLVVNGL 388
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKPD 304
I MY+K +E+ W ++ISG G A ++F +M T + PD
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPD 448
Query: 305 ERTMTAVLSACRN---ADLVRE--AYMVFSDMKKRYGIEPTIQHFGC--VVDLLARAGCL 357
T+ ++L+ C +L +E Y + ++ + ++F C ++D+ A+ G
Sbjct: 449 AITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN--------ENFVCTALIDMYAKCGNE 500
Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
+AE ++ P W ++I + RA + +LEM
Sbjct: 501 VQAESVFKSIK-APCTATWNSMISGYSLSGLQHRA---LSCYLEM 541
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD T +L C++L GK+LHG+ + F ++ ++ ALI MY+ G+ A +
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESV 506
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F + +W S+I G A+ + M E G++ ++ T + VL AC G +
Sbjct: 507 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFV 566
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
G+ A+I + S ++ + M+
Sbjct: 567 DEGKICF----------------RAMIKEFGISPTLQ---------------HYALMVGL 595
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
L L EA+ L +M+ +KPD A+LSAC
Sbjct: 596 LGRACLFTEALYLIWKMD---IKPDSAVWGALLSAC 628
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 180/317 (56%), Gaps = 8/317 (2%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
+ ++ + ++ Y GD+ AR +F R+ RD+V W +LI G + +AI+ F M
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
G E + TV S+L ACA SG L +GR+VH ++ + IE VS ALIDMYAK G +
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG-IELNQFVSNALIDMYAKCGDL 325
Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
E+A +MIS LA HG KEA+++F ME+ ++KPDE T AVL+AC
Sbjct: 326 ENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
Query: 316 RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL 375
+ + E +FS+MK + ++P ++HFGC++ LL R+G LKEA + M +KP+ +
Sbjct: 386 VHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTV 444
Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSY-----ILASNVYASVGKWSNKAEVR 430
L+ ACKVH DTE AE++MK +E + SY SN+YA +W +R
Sbjct: 445 LGALLGACKVHMDTEMAEQVMKI-IETAGSITNSYSENHLASISNLYAHTERWQTAEALR 503
Query: 431 ELMNKKGLIKPPGSSRI 447
M K+GL K PG S +
Sbjct: 504 VEMEKRGLEKSPGLSSL 520
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 150/354 (42%), Gaps = 47/354 (13%)
Query: 52 LTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKC 111
L + +L ++ + +++ + P AL L+ + RR GV P P +L+
Sbjct: 3 LEEHLSLGEFHVSNLIKNHISRGSP---IQALVLYGGIRRR---GVYFPG--WVPLILRA 54
Query: 112 CA----RLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
CA R+ L GK LH K G SD + ++LI MY G + AR++FD MP+R+
Sbjct: 55 CACVVPRVVL---GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERN 111
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH- 226
V +W ++I G + + V A LF E V N T + +++ + R++
Sbjct: 112 VATWNAMIGGYMSNGDAVLASGLFE---EISVCRNTVTWIEMIKGYGKRIEIEKARELFE 168
Query: 227 ----------------GIVKEKKRI-----------ECKCNVSTALIDMYAKSGCIESAX 259
G+ +++ E V + ++ Y + G + A
Sbjct: 169 RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEAR 228
Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
W +I+G A +G +AID F M+ +PD T++++LSAC +
Sbjct: 229 AIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSG 288
Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDA 373
+ V S + R GIE ++D+ A+ G L+ A ++ ++ A
Sbjct: 289 RLDVGREVHSLINHR-GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA 341
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD++ AR + A + +NT++ Y+ + + A+ F M PD
Sbjct: 222 GDVHEARAIFYRVFARDLVIWNTLIAGYAQNG---YSDDAIDAFFNMQGEGYE----PDA 274
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T +L CA+ G+++H I G + ++ NALI MY+ GDL A +F+
Sbjct: 275 VTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFES 334
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ R V S+I L H + EA+E+F M ++ ++ T ++VL AC G L G
Sbjct: 335 ISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEG 394
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
K I E K + K NV GC +I L
Sbjct: 395 LK---IFSEMKTQDVKPNVK--------HFGC---------------------LIHLLGR 422
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR 316
G KEA L EM +VKP++ + A+L AC+
Sbjct: 423 SGKLKEAYRLVKEM---HVKPNDTVLGALLGACK 453
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 207/411 (50%), Gaps = 15/411 (3%)
Query: 43 GDLNYARLLLTSNP-ALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
G ++ AR + P ++++ ++T++ Y S AL+L +F + R + V
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKK-----ALALDLFRIMRKSEVVVNVS 228
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
T L + L + H K+G D +++ ALI MY G + AR +FD
Sbjct: 229 --TLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD 286
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
+DVV+W +ID E + L +M ++ N +T V +L +CA S A +
Sbjct: 287 CAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFV 346
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
GR V +++E+ RI + TAL+DMYAK G +E A WTAMISG
Sbjct: 347 GRTVADLLEEE-RIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYG 405
Query: 282 SHGLCKEAIDLF--LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
+HGL +EA+ LF +E E C V+P+E T VL+AC + LV E F M + Y P
Sbjct: 406 AHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTP 465
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
++H+GCVVDLL RAG L+EA + + +P+ D+ WR L+ AC+V+ + + E +M +
Sbjct: 466 KVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRL 525
Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
EMG IL + +A G K+ EL + K G S IE++
Sbjct: 526 AEMGETHPADAILLAGTHAVAGN-PEKSLDNELNKGR---KEAGYSAIEIE 572
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 183/380 (48%), Gaps = 16/380 (4%)
Query: 8 EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
E ++H ++K G +D SKL F+++ D+ YA + N + +NTM+
Sbjct: 43 EVSRIHGYMVKTGLDKDDFA--VSKLLAFSSVL---DIRYASSIFEHVSNTNLFMFNTMI 97
Query: 68 RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
R YS+S +P F + LR G+ D F+F LK C+R G+ LHG
Sbjct: 98 RGYSISDEPERAFSVFN----QLR--AKGLTL-DRFSFITTLKSCSRELCVSIGEGLHGI 150
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDGLVDHDRPVE 186
+ GF + NALIH Y V G + AR++FD MP D V++++L++G + +
Sbjct: 151 ALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKAL 210
Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
A++LF M ++ V VN +T++S L A +D G LS H ++ K ++ ++ TALI
Sbjct: 211 ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAH-VLCIKIGLDLDLHLITALI 269
Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
MY K+G I SA W MI A GL +E + L +M+ +KP+
Sbjct: 270 GMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSS 329
Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
T +LS+C ++ V +D+ + I +VD+ A+ G L++A + N
Sbjct: 330 TFVGLLSSCAYSEAAFVGRTV-ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNR 388
Query: 367 MPMKPDAVLWRTLIWACKVH 386
M K D W +I H
Sbjct: 389 MKDK-DVKSWTAMISGYGAH 407
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 180/325 (55%), Gaps = 6/325 (1%)
Query: 151 GDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
G + A+++F +M +++SWT++++G+V + EAI +M E+G+ N ++
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
L ACA +L +GR +HG + + ++ T+L+DMYAK G I A
Sbjct: 550 TVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKL 609
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
AMIS A +G KEAI L+ +E +KPD T+T VLSAC +A + +A
Sbjct: 610 YSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIE 669
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+F+D+ + ++P ++H+G +VDLLA AG ++A + MP KPDA + ++L+ +C
Sbjct: 670 IFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQ 729
Query: 387 EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
TE + L ++ LE ++SG+Y+ SN YA G W ++RE+M KGL K PG S
Sbjct: 730 RKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSW 789
Query: 447 IEVDG--ALHEFVMGDYNHPEADNI 469
I++ G +H FV D H + I
Sbjct: 790 IQITGEEGVHVFVANDKTHTRINEI 814
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 177/382 (46%), Gaps = 22/382 (5%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
+S Q+HA+ILK G +KL F A + L A +L + N + +
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDA--LEIAEVLFSKLRVRNVFSWAA 143
Query: 66 MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
++ + AL F+ ML PDNF P V K C LK +R G+ +H
Sbjct: 144 II---GVKCRIGLCEGALMGFVEMLENEIF----PDNFVVPNVCKACGALKWSRFGRGVH 196
Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
G++ K G ++ ++L MY G L A ++FD +PDR+ V+W +L+ G V + +
Sbjct: 197 GYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNE 256
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
EAI LF M + GVE TV + L A A+ G + G++ H I +E + T+L
Sbjct: 257 EAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNG-MELDNILGTSL 315
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
++ Y K G IE A W +ISG GL ++AI + M +K D
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC 375
Query: 306 RTMTAVLSAC---RNADLVREA--YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
T+ ++SA N L +E Y + R+ E I V+D+ A+ G + +A
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCI------RHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 361 EDFMNAMPMKPDAVLWRTLIWA 382
+ ++ ++ D +LW TL+ A
Sbjct: 430 KKVFDS-TVEKDLILWNTLLAA 450
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 152/345 (44%), Gaps = 14/345 (4%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G L+ A + P N+ +N ++ Y + + A+ LF M ++ P
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNG---KNEEAIRLFSDMRKQGVE----PTR 274
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T L A + +GKQ H G D + +L++ Y G + A +FDR
Sbjct: 275 VTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDR 334
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
M ++DVV+W +I G V +AI + M ++ + T+ +++ A A + L +G
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
++V + E +++ ++DMYAK G I A W +++ A
Sbjct: 395 KEVQCYCI-RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMT-AVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
GL EA+ LF M+ V P+ T +LS RN V EA +F M+ GI P +
Sbjct: 454 SGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ-VDEAKDMFLQMQSS-GIIPNL 511
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMP---MKPDAVLWRTLIWAC 383
+ +++ + + GC +EA F+ M ++P+A + AC
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 38/239 (15%)
Query: 87 IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK-MGFGSDCYIMNALIH 145
I LR+ P+ F+ L CA L G+ +HG+I + + S I +L+
Sbjct: 531 ILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVD 590
Query: 146 MYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDAT 205
MY+ GD+ A ++F ++ ++I + EAI L+ + G++ ++ T
Sbjct: 591 MYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNIT 650
Query: 206 VVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX 265
+ +VL AC +G ++ ++ + K+ ++ C+E
Sbjct: 651 ITNVLSACNHAGDINQAIEIFTDIVSKRSMK----------------PCLEH-------- 686
Query: 266 XXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC---RNADLV 321
+ M+ LAS G ++A+ L EM KPD R + +++++C R +LV
Sbjct: 687 -------YGLMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLVASCNKQRKTELV 735
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 3/239 (1%)
Query: 170 SWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-I 228
S+ + L + EA+ L M + + +L+ C LS G+++H I
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKE 288
+K + T L+ YAK +E A W A+I GLC+
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 289 AIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVV 348
A+ F+EM + PD + V AC R V + K G+E + +
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GLEDCVFVASSLA 215
Query: 349 DLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
D+ + G L +A + +P + +AV W L+ + E A RL + GV+ +
Sbjct: 216 DMYGKCGVLDDASKVFDEIPDR-NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 193/379 (50%), Gaps = 3/379 (0%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+ T VL+ CA QG++ H + G ++ + AL+ MY A +
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGA 218
F R+P +DVVSW +LI G + +IE F ML E + +V VL +C++ G
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
L + H V K + + +L+++Y++ G + +A WT++I+
Sbjct: 382 LEQAKCFHSYVI-KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLIT 440
Query: 279 GLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
G HG +A++ F M ++ VKP+E T ++LSAC +A L+ E +F M Y +
Sbjct: 441 GYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRL 500
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
P ++H+ +VDLL R G L A + MP P + TL+ AC++H++ E AE + K
Sbjct: 501 APNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAK 560
Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFV 457
+ E+ + +G Y+L SNVY G+W N ++R + ++G+ K S IE+ +H FV
Sbjct: 561 KLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFV 620
Query: 458 MGDYNHPEADNIFVKLDEM 476
D HPE + ++ L E+
Sbjct: 621 ADDELHPEKEPVYGLLKEL 639
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 163/331 (49%), Gaps = 10/331 (3%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+++M+ + + P + A+ F M+ PD T ++ C +L +R G+
Sbjct: 130 WSSMVSGFEKNGSP---YQAVEFFRRMVMASD---VTPDRVTLITLVSACTKLSNSRLGR 183
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
+HGF+ + GF +D ++N+L++ Y+ A LF + ++DV+SW+++I V +
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
EA+ +F M++ G E N ATV+ VL+ACA + L GRK H + +K +E + VS
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI-RKGLETEVKVS 302
Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF-LEMETCNV 301
TAL+DMY K E A W A+ISG +G+ +I+ F + + N
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
+PD M VL +C + +A F +YG + +V+L +R G L A
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 421
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
N + +K D V+W +LI +H +A
Sbjct: 422 KVFNGIALK-DTVVWTSLITGYGIHGKGTKA 451
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 12/335 (3%)
Query: 48 ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
AR + + Y +NT+L+ SLS + L F M R PDNFT P
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLK--SLSREKQWE-EVLYHFSHMFRDE----EKPDNFTLPV 65
Query: 108 VLKCCARLKLARQGKQLHGFITK-MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
LK C L+ G+ +HGF+ K + GSD Y+ ++LI+MY G + A +FD +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKV 225
D+V+W+S++ G + P +A+E F RM+ A V + T+++++ AC +GR V
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
HG V ++ ++ +L++ YAKS + A W+ +I+ +G
Sbjct: 186 HGFVI-RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
EA+ +F +M +P+ T+ VL AC A + + ++ R G+E ++
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVST 303
Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+VD+ + +EA + +P K D V W LI
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALI 337
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 13/322 (4%)
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
AR++F M R + W +L+ L + E + F M + ++ T+ L+AC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
++ G +HG VK+ + V ++LI MY K G + A W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 276 MISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
M+SG +G +A++ F M +V PD T+ ++SAC R V + +R
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
G + +++ A++ KEA + M + D + W T+I AC V ++ AE
Sbjct: 193 -GFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYV-QNGAAAEA 248
Query: 395 LM--KQHLEMGVDDSGSYILAS-NVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDG 451
L+ ++ G + + + +L A+ + EL +KGL + ++V
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL-----ETEVKVST 303
Query: 452 ALHEFVMGDYNHPEADNIFVKL 473
AL + M ++ EA +F ++
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRI 325
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 182/356 (51%), Gaps = 9/356 (2%)
Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI---D 176
G+ +HG K G GSD + NALI MY L A +F+ M +RD+ +W S++ D
Sbjct: 280 NGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHD 339
Query: 177 GLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIE 236
DHD + LF RML +G+ + T+ +VL C +L GR++HG + +
Sbjct: 340 YCGDHD---GTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLN 396
Query: 237 CKCN---VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
K + + +L+DMY K G + A W MI+G + A+D+F
Sbjct: 397 RKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMF 456
Query: 294 LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLAR 353
M VKPDE T +L AC ++ + E + M+ Y I PT H+ CV+D+L R
Sbjct: 457 SCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGR 516
Query: 354 AGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
A L+EA + + P+ + V+WR+++ +C++H + + A K+ E+ + G Y+L
Sbjct: 517 ADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLM 576
Query: 414 SNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNI 469
SNVY GK+ +VR+ M ++ + K PG S I + +H F G+ HPE +I
Sbjct: 577 SNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSI 632
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 187/391 (47%), Gaps = 28/391 (7%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+H +++ G + D+PR + L A G + A L+ + + + YN ++ +
Sbjct: 81 QIHGFMVRKGFLD-DSPRAGTSLVNMYA--KCGLMRRAVLVFGGSER-DVFGYNALISGF 136
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
++ P A+ + M +G+ PD +TFP +LK ++L+ K++HG K
Sbjct: 137 VVNGSP---LDAMETYREM---RANGI-LPDKYTFPSLLKGSDAMELSDV-KKVHGLAFK 188
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDGLVDHDRPVEAIE 189
+GF SDCY+ + L+ YS F + A+++FD +PDR D V W +L++G R +A+
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALL 248
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
+F +M E GV V+ T+ SVL A SG + GR +HG+ K VS ALIDMY
Sbjct: 249 VFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV-KTGSGSDIVVSNALIDMY 307
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKE---AIDLFLEMETCNVKPDER 306
KS +E A W ++ L H C + + LF M ++PD
Sbjct: 308 GKSKWLEEANSIFEAMDERDLFTWNSV---LCVHDYCGDHDGTLALFERMLCSGIRPDIV 364
Query: 307 TMTAVLSACRNADLVRE-----AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
T+T VL C +R+ YM+ S + R I + ++D+ + G L++A
Sbjct: 365 TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHN--SLMDMYVKCGDLRDAR 422
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
++M +K D+ W +I V E A
Sbjct: 423 MVFDSMRVK-DSASWNIMINGYGVQSCGELA 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 10/287 (3%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDC-YIMNALIHMYSVFGDLGVARELFDRMPDR 166
L+ CA+ K G+Q+HGF+ + GF D +L++MY+ G + A +F +R
Sbjct: 66 TLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SER 124
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
DV + +LI G V + P++A+E + M G+ + T S+L+ +D+ LS +KVH
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVH 183
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGLASHGL 285
G+ K + C V + L+ Y+K +E A W A+++G +
Sbjct: 184 GLAF-KLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
++A+ +F +M V T+T+VLSA + + + + + G I
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG-LAVKTGSGSDIVVSN 301
Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA---CKVHEDT 389
++D+ ++ L+EA AM + D W +++ C H+ T
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDER-DLFTWNSVLCVHDYCGDHDGT 347
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 120/281 (42%), Gaps = 21/281 (7%)
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
N AT ++ L+ CA G+++HG + K ++ T+L++MYAK G + A
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRA-VL 117
Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
+ A+ISG +G +A++ + EM + PD+ T ++L +L
Sbjct: 118 VFGGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL- 176
Query: 322 REAYMVFSDMKKRYGIEPTIQ-----HFGC-VVDLLARAGCLKEAEDFMNAMPMKPDAVL 375
SD+KK +G+ + + G +V ++ +++A+ + +P + D+VL
Sbjct: 177 -------SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVL 229
Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS-NVYASVGKWSNKAEVRELMN 434
W L+ E A + + E GV S I + + + G N + L
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV 289
Query: 435 KKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDE 475
K G S I V AL + EA++IF +DE
Sbjct: 290 KTG-----SGSDIVVSNALIDMYGKSKWLEEANSIFEAMDE 325
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 223/450 (49%), Gaps = 15/450 (3%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
++ + E +Q+H + K + N R S L + A G + ARL S +
Sbjct: 125 DLGCLKEGMQIHGSVEKGNCAGNLIVR--SALLSLYA--RCGKMEEARLQFDSMKERDLV 180
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+N M+ Y+ ++ F SLF ML T G PD FTF +L+ +K
Sbjct: 181 SWNAMIDGYTANACADTSF---SLFQLML---TEG-KKPDCFTFGSLLRASIVVKCLEIV 233
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
+LHG K+GFG ++ +L++ Y G L A +L + RD++S T+LI G
Sbjct: 234 SELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQ 293
Query: 182 DR-PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
+ +A ++F M+ ++++ V S+L+ C ++++GR++HG + +I
Sbjct: 294 NNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA 353
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
+ +LIDMYAKSG IE A WT++I+G HG ++AIDL+ ME
Sbjct: 354 LGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER 413
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
+KP++ T ++LSAC + + ++ M ++GIE +H C++D+LAR+G L+EA
Sbjct: 414 IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
Query: 361 EDFMNAMP--MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYA 418
+ + + + W + AC+ H + + ++ Q L M +YI ++VYA
Sbjct: 474 YALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYA 533
Query: 419 SVGKWSNKAEVRELMNKKGLI-KPPGSSRI 447
+ G W N R+LM + G K PG S +
Sbjct: 534 ANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 156/355 (43%), Gaps = 18/355 (5%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD+ +AR L + + M+ +S +H AL LF M R +
Sbjct: 61 GDVKHARKLFDRISKRDVVSWTAMISRFSRCG---YHPDALLLFKEMHREDVK----ANQ 113
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
FT+ VLK C L ++G Q+HG + K + + +AL+ +Y+ G + AR FD
Sbjct: 114 FTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDS 173
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
M +RD+VSW ++IDG + + LF ML G + + T S+LRA L +
Sbjct: 174 MKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIV 233
Query: 223 RKVHGIVKEKKRIECKCNVSTALI----DMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
++HG+ I+ S+ALI + Y K G + +A TA+I+
Sbjct: 234 SELHGLA-----IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALIT 288
Query: 279 GLASHGLC-KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
G + C +A D+F +M K DE ++++L C V + K I
Sbjct: 289 GFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQI 348
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
+ ++D+ A++G +++A M K D W +LI H + E+A
Sbjct: 349 RFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK-DVRSWTSLIAGYGRHGNFEKA 402
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV 168
LK C+ + +Q +HG GF S+ + + LI +Y GD+ AR+LFDR+ RDV
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGI 228
VSWT++I +A+ LF M V+ N T SVL++C D G L G ++HG
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS 138
Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKE 288
V EK V +AL+ +YA+ G +E A W AMI G ++
Sbjct: 139 V-EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADT 197
Query: 289 AIDLFLEMETCNVKPDERTMTAVLSA 314
+ LF M T KPD T ++L A
Sbjct: 198 SFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
LID+Y K G ++ A WTAMIS + G +A+ LF EM +VK +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
+ T +VL +C++ ++E + ++K I ++ L AR G ++EA
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR-SALLSLYARCGKMEEARLQF 171
Query: 365 NAMPMKPDAVLWRTLI 380
++M + D V W +I
Sbjct: 172 DSMKER-DLVSWNAMI 186
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 197/367 (53%), Gaps = 2/367 (0%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
V+ CA+L G +HG++ + G+ D +N+LI MY+ G L + +F+RM +RD
Sbjct: 352 VVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERD 411
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
+VSW ++I G + +A+ LF M + +V+ TVVS+L+AC+ +GAL +G+ +H
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC 286
IV C V TAL+DMY+K G +E+A W +I+G HG
Sbjct: 472 CIVIRSFIRPCSL-VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKG 530
Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
A++++ E ++P+ AVLS+C + +V++ +FS M + +G+EP +H C
Sbjct: 531 DIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLAC 590
Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDD 406
VVDLL RA +++A F +P + ++ AC+ + TE + + + +E+ D
Sbjct: 591 VVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGD 650
Query: 407 SGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEA 466
+G Y+ + +A++ +W + +E M GL K PG S+IE++G F M +H +
Sbjct: 651 AGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDD 710
Query: 467 DNIFVKL 473
+KL
Sbjct: 711 TVSLLKL 717
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 165/353 (46%), Gaps = 13/353 (3%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+NTM+ Y+ + +S + +L R PD TF L + G+
Sbjct: 213 WNTMISGYASVGN-------MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR 265
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
LH I K GF D ++ ALI MY G + + + +P++DVV WT +I GL+
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
R +A+ +F ML++G +++ + SV+ +CA G+ +G VHG V +
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL-RHGYTLDTPAL 384
Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH-GLCKEAIDLFLEMETCNV 301
+LI MYAK G ++ + W A+ISG A + LCK A+ LF EM+ V
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCK-ALLLFEEMKFKTV 443
Query: 302 KP-DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
+ D T+ ++L AC +A + ++ + + + I P +VD+ ++ G L+ A
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAA 502
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
+ +++ K D V W LI H + A + + L G++ + LA
Sbjct: 503 QRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLA 554
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 159/371 (42%), Gaps = 20/371 (5%)
Query: 51 LLTSNPALNSY-YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVL 109
++ ++ LNS Y+N+ + S D H LS F ML PD FTFP +L
Sbjct: 1 MIRTSSVLNSTKYFNSHINHLSSHGD---HKQVLSTFSSMLANKL----LPDTFTFPSLL 53
Query: 110 KCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVV 169
K CA L+ G +H + GF SD YI ++L+++Y+ FG L AR++F+ M +RDVV
Sbjct: 54 KACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVV 113
Query: 170 SWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIV 229
WT++I EA L M G++ T++ +L + L I
Sbjct: 114 HWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIY 173
Query: 230 KEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEA 289
+C V +++++Y K + A W MISG AS G E
Sbjct: 174 G----FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEI 229
Query: 290 IDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVD 349
+ L M ++PD++T A LS + M+ + K G + + ++
Sbjct: 230 LKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT-GFDVDMHLKTALIT 288
Query: 350 LLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGS 409
+ + G + + + +P K D V W +I E+A + + L+ G D
Sbjct: 289 MYLKCGKEEASYRVLETIPNK-DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD---- 343
Query: 410 YILASNVYASV 420
L+S ASV
Sbjct: 344 --LSSEAIASV 352
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 8/197 (4%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N ++ Y+ + D AL LF M + V D+FT +L+ C+ GK
Sbjct: 415 WNAIISGYAQNVDLCK---ALLLFEEMKFKTVQQV---DSFTVVSLLQACSSAGALPVGK 468
Query: 123 QLHGFITKMGFGSDCYIMN-ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
+H + + F C +++ AL+ MYS G L A+ FD + +DVVSW LI G H
Sbjct: 469 LIHCIVIR-SFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFH 527
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
+ A+E++ L +G+E N ++VL +C+ +G + G K+ + +E
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEH 587
Query: 242 STALIDMYAKSGCIESA 258
++D+ ++ IE A
Sbjct: 588 LACVVDLLCRAKRIEDA 604
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 187/374 (50%), Gaps = 40/374 (10%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCY--IMNALIHMYSVFGDLGVA- 156
P +L AR + +G QLHG I K GF DCY + +IH Y+V D+ +A
Sbjct: 303 PSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF--DCYDFLQATIIHFYAVSNDIKLAL 360
Query: 157 ------------------------------RELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
RE+FD+ D+D+ SW ++I G P
Sbjct: 361 QQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420
Query: 187 AIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
A+ LF M+ + DA T+VSV A + G+L G++ H + I N++ A+
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST-IPPNDNLTAAI 479
Query: 246 IDMYAKSGCIESAXX---XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
IDMYAK G IE+A W A+I G A+HG K A+DL+ ++++ +K
Sbjct: 480 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 539
Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
P+ T VLSAC +A LV F MK +GIEP I+H+GC+VDLL +AG L+EA++
Sbjct: 540 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE 599
Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGK 422
+ MP+K D ++W L+ A + H + E AE + + G ++ SNVYA G+
Sbjct: 600 MIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGR 659
Query: 423 WSNKAEVRELMNKK 436
W + A VRE M +
Sbjct: 660 WEDVALVREEMRTR 673
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 37/263 (14%)
Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY----------SVFGD------ 152
L CA G+Q+H + K G S+ YI N++++MY SVF D
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 153 ---------------LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
L A +LFD MP+R VS+T+LI G +++ EA+ELF M
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
G+ +N+ T+ +V+ AC+ G + R + + K ++E + VST L+ MY C++
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAI-KLKLEGRVFVSTNLLHMYCLCLCLKD 226
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
A W M++G + GL ++A +LF ++ + D + ++ C
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDGCLR 282
Query: 318 ADLVREAYMVFSDMKKRYGIEPT 340
+ + EA + +++M R G++P+
Sbjct: 283 KNQLDEALVYYTEM-LRCGMKPS 304
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 46/285 (16%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
N +++ YS G + A ELFD++ ++D+VSW ++IDG + ++ EA+ + ML G++
Sbjct: 243 NVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMK 302
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA---------- 250
++ +V +L A A S S G ++HG + K+ +C + +I YA
Sbjct: 303 PSEVMMVDLLSASARSVGSSKGLQLHGTIV-KRGFDCYDFLQATIIHFYAVSNDIKLALQ 361
Query: 251 ---------------------KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEA 289
K+G +E A W AMISG A + A
Sbjct: 362 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLA 421
Query: 290 IDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREA-----YMVFSDMKKRYGIEPTIQH 343
+ LF EM + VKPD TM +V SA + + E Y+ FS I P
Sbjct: 422 LHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST------IPPNDNL 475
Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL--WRTLIWACKVH 386
++D+ A+ G ++ A + + + + W +I H
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 14/283 (4%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
+S ++L Q + ++ A RN A +G + AR + + + +N
Sbjct: 352 VSNDIKLALQQFEASVKDHIASRNA----LIAGFVKNGMVEQAREVFDQTHDKDIFSWNA 407
Query: 66 MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
M+ Y+ S P H LF M+ + PD T V + L +GK+ H
Sbjct: 408 MISGYAQSLSPQLALH---LFREMI---SSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR---MPDRDVVSWTSLIDGLVDHD 182
++ + + A+I MY+ G + A +F + + + W ++I G H
Sbjct: 462 DYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHG 521
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
A++L+ + ++ N T V VL AC +G + +G+ +K IE
Sbjct: 522 HAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHY 581
Query: 243 TALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGLASHG 284
++D+ K+G +E A W ++S +HG
Sbjct: 582 GCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 196/404 (48%), Gaps = 49/404 (12%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPS---GDLNYARLLLTSNPALNS 60
+ S+ Q+H +I+K +N+ +L +S S G+ YA L+ + ++
Sbjct: 31 SNFSQLKQIHTKIIKHNLTND-------QLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 61 YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+ +N M+R+ S++ P AL LFI M+ D FTFPFV+K C R
Sbjct: 84 FTWNLMIRSLSVNHKPRE---ALLLFILMMISHQSQF---DKFTFPFVIKACLASSSIRL 137
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-------------- 166
G Q+HG K GF +D + N L+ +Y G R++FD+MP R
Sbjct: 138 GTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVS 197
Query: 167 -----------------DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
+VVSWT++I V + RP EA +LF RM V+ N+ T+V++
Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNL 257
Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX 269
L+A G+LSMGR VH K C + TALIDMY+K G ++ A
Sbjct: 258 LQASTQLGSLSMGRWVHDYA-HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS 316
Query: 270 XXXWTAMISGLASHGLCKEAIDLF-LEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
W +MI+ L HG +EA+ LF E +V+PD T VLSAC N V++ F
Sbjct: 317 LATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYF 376
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD 372
+ M + YGI P +H C++ LL +A +++A + + +M PD
Sbjct: 377 TRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 128/322 (39%), Gaps = 38/322 (11%)
Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
+ L+ C+ Q KQ+H I K +D ++ LI + S FG+ A +F+++
Sbjct: 25 YFLRTCSNFS---QLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFG-RMLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
+W +I L + +P EA+ LF M+ + + T V++AC S ++ +G +V
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSG-------------------------------C 254
HG+ K L+D+Y K G
Sbjct: 142 HGLAI-KAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 255 IESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
++SA WTAMI+ + EA LF M+ +VKP+E T+ +L A
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
+ V D + G ++D+ ++ G L++A + M K A
Sbjct: 261 STQLGSLSMGRWV-HDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLAT 319
Query: 375 LWRTLIWACKVHEDTERAERLM 396
W ++I + VH E A L
Sbjct: 320 -WNSMITSLGVHGCGEEALSLF 340
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 220/473 (46%), Gaps = 50/473 (10%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
++HA I+K G + N S L G L+YAR + P YN M+ Y
Sbjct: 55 KIHADIIKTGFQPD---LNISIKLLILHLK-CGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCC----ARLKLARQ-GKQLH 125
H L + + R G A D +T VLK + + L R + +H
Sbjct: 111 ------LKHGLVKELLLLVQRMSYSGEKA-DGYTLSMVLKASNSRGSTMILPRSLCRLVH 163
Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
I K D ++ AL+ Y G L AR +F+ M D +VV TS+I G ++
Sbjct: 164 ARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVE 223
Query: 186 EAIELFG--------------------------------RMLEAGVEVNDATVVSVLRAC 213
+A E+F M AG N +T SV+ AC
Sbjct: 224 DAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGAC 283
Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
+ + +G++VH + K + + ++L+DMYAK G I A W
Sbjct: 284 SVLTSHEVGQQVHAQIM-KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSW 342
Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
T+MI G +G +EA++LF M+ ++P+ T LSAC ++ LV + Y +F M++
Sbjct: 343 TSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQR 402
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAE 393
Y ++P ++H+ C+VDL+ RAG L +A +F AMP +PD+ +W L+ +C +H + E A
Sbjct: 403 DYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELAS 462
Query: 394 RLMKQHLEMGVDD-SGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
+ ++ D G+Y+ SNVYAS KW N +++RE+M ++ + K G S
Sbjct: 463 IAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 151/367 (41%), Gaps = 53/367 (14%)
Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
+ GK++H I K GF D I L+ ++ G L AR++FD +P + ++ +I G
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL-----SMGRKVHGIVKEKK 233
+ H E + L RM +G + + T+ VL+A G+ S+ R VH +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARI---- 166
Query: 234 RIECKCNVS------TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
KC+V TAL+D Y KSG +ESA T+MISG + G +
Sbjct: 167 ---IKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVE 223
Query: 288 EA--------------------------------IDLFLEMETCNVKPDERTMTAVLSAC 315
+A +D+++ M+ P+ T +V+ AC
Sbjct: 224 DAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGAC 283
Query: 316 RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL 375
V + + K G+ I+ ++D+ A+ G + +A + M K +
Sbjct: 284 SVLTSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK-NVFS 341
Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEVRELMN 434
W ++I + + E A L + E ++ + +++ A + + G E+ E M
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
Query: 435 KKGLIKP 441
+ +KP
Sbjct: 402 RDYSMKP 408
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 211/428 (49%), Gaps = 15/428 (3%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
T M +QLH ++K G ++ P + L F G + AR + + + +
Sbjct: 156 TNMKAGIQLHCLMVKQGLESSCFPS--TSLVHFYG--KCGLIVEARRVFEAVLDRDLVLW 211
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
N ++ +Y L+ F L L D FTF +L C R++ QGKQ
Sbjct: 212 NALVSSYVLNGMIDEAFGLLKLM-----GSDKNRFRGDYFTFSSLLSAC-RIE---QGKQ 262
Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
+H + K+ + D + AL++MY+ L ARE F+ M R+VVSW ++I G +
Sbjct: 263 IHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGE 322
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
EA+ LFG+ML ++ ++ T SVL +CA A+ ++V +V +K + +V+
Sbjct: 323 GREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF-LSVAN 381
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
+LI Y+++G + A WT++I LASHG +E++ +F M ++P
Sbjct: 382 SLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQP 440
Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
D+ T VLSAC + LV+E F M + Y IE +H+ C++DLL RAG + EA D
Sbjct: 441 DKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDV 500
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
+N+MP +P C +HE E + K+ LE+ +Y + SN Y S G W
Sbjct: 501 LNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHW 560
Query: 424 SNKAEVRE 431
+ A +R+
Sbjct: 561 NQAALLRK 568
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 186/406 (45%), Gaps = 31/406 (7%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
+S+ Q H ++K G N+ +N KL A + + + A L P N +N
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQN--KLLQ--AYTKIREFDDADKLFDEMPLRNIVTWNI 107
Query: 66 MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
++ T+H L F ++ R V + D+ +F +++ C + G QLH
Sbjct: 108 LIHGVIQRDGDTNHRAHLG-FCYLSRILFTDV-SLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI-----DGLVD 180
+ K G S C+ +L+H Y G + AR +F+ + DRD+V W +L+ +G++D
Sbjct: 166 CLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMID 225
Query: 181 HDRPVEAIELFGRMLEAGVEVND-----ATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
E FG + G + N T S+L AC + G+++H I+ K
Sbjct: 226 --------EAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILF-KVSY 272
Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
+ V+TAL++MYAKS + A W AMI G A +G +EA+ LF +
Sbjct: 273 QFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQ 332
Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
M N++PDE T +VLS+C + E V + + K+ G + ++ +R G
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKK-GSADFLSVANSLISSYSRNG 391
Query: 356 CLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
L EA +++ +PD V W ++I A H E + ++ + L+
Sbjct: 392 NLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQ 436
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 152/326 (46%), Gaps = 19/326 (5%)
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
KQ HGF+ K G + ++ N L+ Y+ + A +LFD MP R++V+W LI G++
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 182 D-----RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIE 236
D R R+L V ++ + + ++R C DS + G ++H ++ K+ +E
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV-KQGLE 174
Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
C ST+L+ Y K G I A W A++S +G+ EA L M
Sbjct: 175 SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Query: 297 --ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
+ + D T +++LSACR + ++ + + + ++ I ++++ A++
Sbjct: 235 GSDKNRFRGDYFTFSSLLSACR-IEQGKQIHAILFKVSYQFDIPVAT----ALLNMYAKS 289
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS 414
L +A + +M ++ + V W +I + + A RL Q L + + +
Sbjct: 290 NHLSDARECFESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE--LTFA 346
Query: 415 NVYASVGKWSNKAEVRE---LMNKKG 437
+V +S K+S E+++ ++ KKG
Sbjct: 347 SVLSSCAKFSAIWEIKQVQAMVTKKG 372
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 199/446 (44%), Gaps = 63/446 (14%)
Query: 86 FIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIH 145
F LR G ++ T + K C R+G Q+HG +++M D ++ N+L+
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS 318
Query: 146 MYSVFGDLGVAR-------------------------------ELFDRMPDRDVVSWTSL 174
MYS G +G A+ ELF++MP +D+VSWT +
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDM 378
Query: 175 IDGLVDHDRPVEAIELFG-------------------------------RMLEAGVEVND 203
I G + +ELFG +ML+ V N
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 204 ATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXX 263
T SVL A A L G ++HG V K I +V +L+ MY K G A
Sbjct: 439 YTFSSVLSATASLADLIEGLQIHGRVV-KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS 497
Query: 264 XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVRE 323
+ MISG + +G K+A+ LF +E+ +P+ T A+LSAC + V
Sbjct: 498 CISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDL 557
Query: 324 AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC 383
+ F MK Y IEP H+ C+VDLL R+G L +A + ++ MP KP + +W +L+ A
Sbjct: 558 GWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSAS 617
Query: 384 KVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPG 443
K H + AE K+ +E+ D + Y++ S +Y+ +GK + + + K + K PG
Sbjct: 618 KTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPG 677
Query: 444 SSRIEVDGALHEFVMGDYNHPEADNI 469
SS I + G +H F+ GD + + I
Sbjct: 678 SSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 16/280 (5%)
Query: 38 ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
S G+++ L P ++ + M+ A+ + ++ AL F ML++
Sbjct: 381 GFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNG---YYEEALCWFHKMLQKEV--- 434
Query: 98 PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
P+++TF VL A L +G Q+HG + KM +D + N+L+ MY G+ A
Sbjct: 435 -CPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAY 493
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
++F + + ++VS+ ++I G + +A++LF + +G E N T +++L AC G
Sbjct: 494 KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX-XXXXXXWTAM 276
+ +G K +K IE + ++D+ +SG ++ A W ++
Sbjct: 554 YVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSL 613
Query: 277 ISGLASH---GLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
+S +H L + A +E+E PD T VLS
Sbjct: 614 LSASKTHLRVDLAELAAKKLIELE-----PDSATPYVVLS 648
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-V 199
++++H Y G + AR LFDRM +R+V++WT++IDG + LF RM + G V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
+VN T+ + +AC D G ++HG+V + +E + +L+ MY+K G + A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLV-SRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
W ++I+GL EA +LF +M
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 20/235 (8%)
Query: 152 DLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
DLG A ELF +P+++ VS+ ++I G V R EA L+ E V+ D+ +VL
Sbjct: 128 DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYA---ETPVKFRDSVASNVLL 184
Query: 212 ACADSGALSMGR-----KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
SG L G+ +V + K+ + C ++++ Y K G I A
Sbjct: 185 ----SGYLRAGKWNEAVRVFQGMAVKEVVSC-----SSMVHGYCKMGRIVDARSLFDRMT 235
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAY 325
WTAMI G G ++ LFL M + +VK + T+ + ACR+ RE
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ + R +E + ++ + ++ G + EA+ M K D+V W +LI
Sbjct: 296 QIHG-LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK-DSVSWNSLI 348
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 194/411 (47%), Gaps = 12/411 (2%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G ++ AR + + + M+ Y+ D + L F GV P+
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF------EGVR-PNA 319
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T ++ C GK LHG+ + SD I +LI MY+ + + +F
Sbjct: 320 VTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSG 379
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
W+++I G V ++ +A+ LF RM VE N AT+ S+L A A L
Sbjct: 380 ASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQA 439
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA----XXXXXXXXXXXXXXWTAMIS 278
+H + K + +T L+ +Y+K G +ESA W A+IS
Sbjct: 440 MNIHCYLT-KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALIS 498
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
G HG A+ +F+EM V P+E T T+ L+AC ++ LV E +F M + Y
Sbjct: 499 GYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL 558
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
H+ C+VDLL RAG L EA + + +P +P + +W L+ AC HE+ + E +
Sbjct: 559 ARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANK 618
Query: 399 HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
E+ +++G+Y+L +N+YA++G+W + +VR +M GL K PG S IE+
Sbjct: 619 LFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 11/314 (3%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
++S+ LH ++ G + S + G + YAR L P + YN
Sbjct: 30 SISKTKALHCHVITGGRVSGHILSTLSVTYALC-----GHITYARKLFEEMPQSSLLSYN 84
Query: 65 TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
++R Y + +H A+S+FI M+ VP D +T+PFV K LK + G +
Sbjct: 85 IVIRMYV--REGLYH-DAISVFIRMVSEGVKCVP--DGYTYPFVAKAAGELKSMKLGLVV 139
Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
HG I + FG D Y+ NAL+ MY FG + +AR++FD M +RDV+SW ++I G +
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYM 199
Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
+A+ +F M+ V+++ AT+VS+L C L MGR VH +V E+KR+ K V A
Sbjct: 200 NDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV-EEKRLGDKIEVKNA 258
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
L++MY K G ++ A WT MI+G G + A++L M+ V+P+
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 305 ERTMTAVLSACRNA 318
T+ +++S C +A
Sbjct: 319 AVTIASLVSVCGDA 332
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 182/406 (44%), Gaps = 16/406 (3%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
E+ +M L +H +IL+ + +N A G + AR + +
Sbjct: 129 ELKSMKLGLVVHGRILRSWFGRDKYVQNA----LLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+NTM+ Y + + AL +F +M+ D+ T +L C LK G
Sbjct: 185 SWNTMISGYYRNG---YMNDALMMFDWMVNESVD----LDHATIVSMLPVCGHLKDLEMG 237
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
+ +H + + G + NAL++MY G + AR +FDRM RDV++WT +I+G +
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
A+EL M GV N T+ S++ C D+ ++ G+ +HG ++++ +
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV-RQQVYSDIII 356
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
T+LI MYAK ++ W+A+I+G + L +A+ LF M +V
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
+P+ T+ ++L A +R+A + + K G ++ +V + ++ G L+ A
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 362 DFMNAMPMK---PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
N + K D VLW LI +H D A ++ + + GV
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGV 521
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 230/500 (46%), Gaps = 81/500 (16%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLT--------SNPALNSYY 62
Q+HAQIL +G D+ N S + +A GDL A +L S AL S Y
Sbjct: 208 QIHAQIL-IGGVECDSKMNSSLVNVYA---KCGDLRMASYMLEQIREPDDHSLSALISGY 263
Query: 63 -----------------------YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
+N+M+ Y ++ AL LF M R T
Sbjct: 264 ANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN---MKMEALVLFNEM-RNETR---- 315
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF-----------------GS------- 135
D+ T V+ C L GKQ+H K G GS
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 136 -------DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
D ++N++I +Y G + A+ +F+R+ ++ ++SW S+ +G + VE +
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG---IVKEKKRIECKCNVSTAL 245
E F +M + + ++ ++ SV+ ACA +L +G +V IV ++ VS++L
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVG----LDSDQVVSSSL 491
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
ID+Y K G +E W +MISG A++G EAIDLF +M ++P +
Sbjct: 492 IDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQ 551
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
T VL+AC LV E +F MK +G P +HF C+VDLLARAG ++EA + +
Sbjct: 552 ITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVE 611
Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
MP D +W +++ C + ++ ++ +E+ ++S +Y+ S ++A+ G W +
Sbjct: 612 EMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWES 671
Query: 426 KAEVRELMNKKGLIKPPGSS 445
A VR+LM + + K PGSS
Sbjct: 672 SALVRKLMRENNVTKNPGSS 691
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 164/406 (40%), Gaps = 76/406 (18%)
Query: 37 AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHG 96
+ + +G+L+ AR L + P + N++L Y L+ F
Sbjct: 132 SGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNF-------- 183
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
+ D T VLK CA L+ + GKQ+H I G D + ++L+++Y+ GDL +A
Sbjct: 184 --SADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 241
Query: 157 -------------------------------RELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
R LFDR +R V+ W S+I G + ++ +
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
EA+ LF M E + T+ +V+ AC G L G+++H + I+ V++ L
Sbjct: 302 EALVLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLID-DIVVASTL 359
Query: 246 IDMYAKSGC-------------------------------IESAXXXXXXXXXXXXXXWT 274
+DMY+K G I+ A W
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
+M +G + +G E ++ F +M ++ DE ++++V+SAC + + VF+
Sbjct: 420 SMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR-ATI 478
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
G++ ++DL + G ++ + M +K D V W ++I
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMI 523
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 42/300 (14%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
D Y N ++ ++ G+L VAR LF+ MP++DVV+ SL+ G + + EA+ LF
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFK--- 179
Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
E + T+ +VL+ACA+ AL G+++H + +EC ++++L+++YAK G +
Sbjct: 180 ELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGG-VECDSKMNSSLVNVYAKCGDL 238
Query: 256 ESAXXXXXX-------------------------------XXXXXXXXWTAMISGLASHG 284
A W +MISG ++
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHF 344
+ EA+ LF EM + D RT+ AV++AC + + K +G+ I
Sbjct: 299 MKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACK-FGLIDDIVVA 356
Query: 345 GCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI---WACKVHEDTERA-ERLMKQHL 400
++D+ ++ G EA + + D +L ++I ++C +D +R ER+ + L
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEVE-SYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL 415
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 48/267 (17%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIM-NALIHMYSVFGDLGVARELFDRMPDR 166
+L+ C+ +Q +G + K GF S I+ N L+ MYS G +G+AR LFD MPDR
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKV 225
+ SW ++I+G ++ ++ F M E G N V+ A +G LS+ R++
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWN-----VVVSGFAKAGELSVARRL 146
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
+ EK + +++ G +G
Sbjct: 147 FNAMPEKDVV------------------------------------TLNSLLHGYILNGY 170
Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
+EA+ LF E+ N D T+T VL AC + ++ + + + G+E +
Sbjct: 171 AEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIG-GVECDSKMNS 226
Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPD 372
+V++ A+ G L+ A +M +PD
Sbjct: 227 SLVNVYAKCGDLRMA-SYMLEQIREPD 252
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 196/409 (47%), Gaps = 39/409 (9%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+ FTF V+ + + GKQLH + KMG S+ ++ +A+++ Y L AR
Sbjct: 91 PNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRC 150
Query: 160 FD-------------------------------RMPDRDVVSWTSLIDGLVDHDRPVEAI 188
FD MP+R VV+W ++I G R EA+
Sbjct: 151 FDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAV 210
Query: 189 ELFGRMLEAGVEV-NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
F ML GV + N++T + A ++ + G+ +H + V +LI
Sbjct: 211 NTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLIS 270
Query: 248 MYAKSGCIESAXXX--XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPD 304
Y+K G +E + W +MI G A +G +EA+ +F +M + N++P+
Sbjct: 271 FYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPN 330
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI---QHFGCVVDLLARAGCLKEAE 361
T+ VL AC +A L++E YM F+ Y +P + +H+ C+VD+L+R+G KEAE
Sbjct: 331 NVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAE 389
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
+ + +MP+ P W+ L+ C++H + A+ + LE+ D SY++ SN Y+++
Sbjct: 390 ELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAME 449
Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIF 470
W N + +R M + GL + G S IEV + FV D N+ D ++
Sbjct: 450 NWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVY 498
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 51 LLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLK 110
L + P + +N ++ +S + + A++ F+ MLR GV P+ TFP +
Sbjct: 181 LFRAMPERSVVTWNAVIGGFSQTG---RNEEAVNTFVDMLR---EGVVIPNESTFPCAIT 234
Query: 111 CCARLKLARQGKQLHGFITK-MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD--RD 167
+ + GK +H K +G + ++ N+LI YS G++ + F+++ + R+
Sbjct: 235 AISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRN 294
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSMG 222
+VSW S+I G + R EA+ +F +M+ + + N+ T++ VL AC +G + G
Sbjct: 295 IVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEG 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 32/259 (12%)
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
A ++FD +P+ DV+S T++I V R VEA + F R+L G+ N+ T +V+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 216 SGALSMGRKVH----------GIVKEKKRIECKCNVS--------------------TAL 245
S + +G+++H + + C +S T L
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPD 304
I Y K E A W A+I G + G +EA++ F++M V P+
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
E T ++A N + + K G + + ++ ++ G ++++
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAF 285
Query: 365 NAMPMKP-DAVLWRTLIWA 382
N + + + V W ++IW
Sbjct: 286 NKLEEEQRNIVSWNSMIWG 304
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 190/394 (48%), Gaps = 40/394 (10%)
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCNVSTA 244
+AIEL L+ G + V + +CA+ +L +KVH ++ K R + K N
Sbjct: 223 DAIEL----LDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLN--NM 276
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
+I M+ + I A W M+ + +G+ +A+ LF EM +KP+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
E T V AC + EA++ F MK +GI P +H+ V+ +L + G L EAE ++
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYI 396
Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
+P +P A W + ++H D + + + + L + VD S
Sbjct: 397 RDLPFEPTADFWEAMRNYARLHGDIDLEDYM--EELMVDVDPS----------------- 437
Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
+ ++NK + PP S E + V E N+ DE + K+G
Sbjct: 438 -----KAVINK--IPTPPPKSFKETN-----MVTSKSRILEFRNLTFYKDEAKEMAAKKG 485
Query: 485 --YNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEF 542
Y P VL +ID E K LL+HSE+LA+AYG+I T + I+KNLR C DCH F
Sbjct: 486 VVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNF 545
Query: 543 MKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+K++SKI R +IVRD RFHHFK+G CSC DYW
Sbjct: 546 IKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 9/233 (3%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD F + + CA LK K++H + F D + N +I M+ + A+ +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
FD M D+D+ SW ++ D+ +A+ LF M + G++ N+ T ++V ACA G +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG-CIESAXXXXXXXXXXXXXXWTAMIS 278
+K + I K ++ + K G +E+ W AM +
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 279 GLASHGLCKEAIDL--FLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFS 329
HG IDL ++E +V P + + + + + +E MV S
Sbjct: 414 YARLHG----DIDLEDYMEELMVDVDPSKAVINKIPTPPPKS--FKETNMVTS 460
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 183/338 (54%), Gaps = 5/338 (1%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
++I Y GD+ A LF ++ D+D V+WT +I GLV ++ EA L M+ G++
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIV-KEKKRIECKCNVSTALIDMYAKSGCIESAX 259
++T +L + + L G+ +H ++ K + + +L+ MYAK G IE A
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
W +MI GL+ HGL +A++LF EM KP+ T VLSAC ++
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
L+ +F MK+ Y I+P I H+ ++DLL RAG LKEAE+F++A+P PD ++ L
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
Query: 380 IWACKVH---EDTER-AERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNK 435
+ C ++ +D E AER + LE+ ++ ++ NVYA +G+ + E+R+ M
Sbjct: 644 LGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGI 703
Query: 436 KGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKL 473
KG+ K PG S + V+G + F+ GD + EA + + +
Sbjct: 704 KGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPI 741
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 18/257 (7%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMG--FGSDCYIMNALIHMYSVFGDLGVAR 157
P N T+ +L QGK +H I K + D + N+L+ MY+ G + A
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
E+F +M +D VSW S+I GL H +A+ LF ML++G + N T + VL AC+ SG
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
++ G ++ +KE I+ + ++ID+ ++G ++ A +
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
Query: 278 SGLA--------SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFS 329
GL + G+ + A LE++ N P + V + D+ +E
Sbjct: 644 LGLCGLNWRDKDAEGIAERAAMRLLELDPVNA-PGHVALCNVYAGLGRHDMEKE------ 696
Query: 330 DMKKRYGIEPTIQHFGC 346
M+K GI+ + GC
Sbjct: 697 -MRKEMGIKGVKKTPGC 712
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 131/333 (39%), Gaps = 73/333 (21%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE--AG 198
++++ Y +GD+ A LF MP+R++VSWT++I G ++ EA+ LF M +
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA 294
Query: 199 VEVNDATVVSVLRACADSGA--LSMGRKVHGIVKEK--KRIECKCNVSTALIDMYAKSGC 254
V N T++S+ AC G +G ++H V + ++ ++ +L+ MYA SG
Sbjct: 295 VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGL 354
Query: 255 IESAXXXXXXXXXXXX------------------------------XXWTAMISG----- 279
I SA WT+MI G
Sbjct: 355 IASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAG 414
Query: 280 --------------------------LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
L + L EA L +M C +KP T + +LS
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 314 ---ACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
A N D + + V + Y + +Q+ +V + A+ G +++A + M K
Sbjct: 475 SAGATSNLDQGKHIHCVIAKTTACYDPDLILQN--SLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
D V W ++I H ++A L K+ L+ G
Sbjct: 533 -DTVSWNSMIMGLSHHGLADKALNLFKEMLDSG 564
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
A ELFD MP+R+VVSW +L+ GL+ + +A ++F M V +A +++ +
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNA----MIKGYIE 212
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
+ + + + G + EK + T+++ Y + G + A WTA
Sbjct: 213 NDGMEEAKLLFGDMSEKNVV-----TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 267
Query: 276 MISGLASHGLCKEAIDLFLEM--ETCNVKPDERTMTAVLSAC 315
MISG A + L +EA+ LFLEM + V P+ T+ ++ AC
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDR------------------------------DVVS 170
+L+ Y+ G L AR LF+ MP+R +VVS
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS 140
Query: 171 WTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVK 230
WT ++ L D R +A+ELF M E V + V ++R +G + ++V +
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIR----NGDMEKAKQVFDAMP 196
Query: 231 EKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAI 290
+ + A+I Y ++ +E A WT+M+ G +G +EA
Sbjct: 197 SRDVVSW-----NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAY 251
Query: 291 DLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
LF EM N+ + TA++S +L REA M+F +MKK
Sbjct: 252 RLFCEMPERNIV----SWTAMISGFAWNELYREALMLFLEMKK 290
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 196/417 (47%), Gaps = 32/417 (7%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+ T V + C + G ++H + + D + NA+I Y+ G L AR L
Sbjct: 232 PNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARAL 291
Query: 160 FDRMPDRDVVS-------------------------------WTSLIDGLVDHDRPVEAI 188
FD M ++D V+ W ++I GL+ ++ E I
Sbjct: 292 FDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVI 351
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
F M+ G N T+ S+L + S L G+++H + + V+T++ID
Sbjct: 352 NSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAI-RNGADNNIYVTTSIIDN 410
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
YAK G + A WTA+I+ A HG A LF +M+ KPD+ T+
Sbjct: 411 YAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTL 470
Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
TAVLSA ++ A +F M +Y IEP ++H+ C+V +L+RAG L +A +F++ MP
Sbjct: 471 TAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP 530
Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
+ P A +W L+ V D E A + EM +++G+Y + +N+Y G+W
Sbjct: 531 IDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEM 590
Query: 429 VRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
VR M + GL K PG+S IE + L F+ D + + ++ ++ +V+ + + Y
Sbjct: 591 VRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEY 647
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 192/434 (44%), Gaps = 51/434 (11%)
Query: 10 LQLHAQILKLGTSNNDAPRNF--SKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
LQLHA+I+ P NF SKL +F + A + N++ YN +L
Sbjct: 42 LQLHARIVVFSIK----PDNFLASKLISF--YTRQDRFRQALHVFDEITVRNAFSYNALL 95
Query: 68 RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA--PDNFTFPFVLKC---CARLKLARQGK 122
AY+ +F A SLF+ + + A PD+ + VLK C L +
Sbjct: 96 IAYT---SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLAR 152
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
Q+HGF+ + GF SD ++ N +I Y+ ++ AR++FD M +RDVVSW S+I G
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 183 RPVEAIELFGRMLE-AGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
+ +++ ML + + N TV+SV +AC S L G +VH + E I+ ++
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE-NHIQMDLSL 271
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET--- 298
A+I YAK G ++ A + A+ISG +HGL KEA+ LF EME+
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 299 ----------------------------CNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
C +P+ T++++L + + ++ + +
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA- 390
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
R G + I ++D A+ G L A+ + + + W +I A VH D++
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS-LIAWTAIITAYAVHGDSD 449
Query: 391 RAERLMKQHLEMGV 404
A L Q +G
Sbjct: 450 SACSLFDQMQCLGT 463
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 12/261 (4%)
Query: 77 THHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSD 136
HH ++ F M+R + P+ T +L + GK++H F + G ++
Sbjct: 345 NHHEEVINSFREMIRCGSR----PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 137 CYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE 196
Y+ ++I Y+ G L A+ +FD DR +++WT++I H A LF +M
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC 460
Query: 197 AGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIE 256
G + +D T+ +VL A A SG M + + + K IE ++ + +++G +
Sbjct: 461 LGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLS 520
Query: 257 SAXXXXXXX-XXXXXXXWTAMISGLASHG---LCKEAIDLFLEMETCNVKPDERTMTAVL 312
A W A+++G + G + + A D EME N T +
Sbjct: 521 DAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTG----NYTIMA 576
Query: 313 SACRNADLVREAYMVFSDMKK 333
+ A EA MV + MK+
Sbjct: 577 NLYTQAGRWEEAEMVRNKMKR 597
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 130/330 (39%), Gaps = 16/330 (4%)
Query: 88 FMLRRPTHGV---PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALI 144
F ++R G+ A D + +++ R +L QLH I D ++ + LI
Sbjct: 5 FEIQRALQGLLNKAAVDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLI 64
Query: 145 HMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA 204
Y+ A +FD + R+ S+ +L+ + +A LF + + +DA
Sbjct: 65 SFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDA 124
Query: 205 T---------VVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
V+ L C D S+ R+VHG V + + V +I Y K I
Sbjct: 125 ARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI-RGGFDSDVFVGNGMITYYTKCDNI 183
Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC-NVKPDERTMTAVLSA 314
ESA W +MISG + G ++ ++ M C + KP+ T+ +V A
Sbjct: 184 ESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQA 243
Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
C + + V M + + I+ + V+ A+ G L A + M K D+V
Sbjct: 244 CGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-DSV 301
Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGV 404
+ +I H + A L + +G+
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGL 331
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 167/312 (53%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
D ++I Y+ GD+ AR+LF+ DV +W++LI G + +P EA ++F M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
V+ ++ +V ++ AC+ G + KV + ++ V ALIDM AK G +
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
+ A + +M+ G+A HG EAI LF +M + PDE T +L C
Sbjct: 357 DRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVC 416
Query: 316 RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL 375
+ LV E F M+K+Y I + H+ C+V+LL+R G LKEA + + +MP + A
Sbjct: 417 GQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASA 476
Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNK 435
W +L+ C +H +TE AE + + E+ +GSY+L SN+YA++ +W++ A +R+ MN+
Sbjct: 477 WGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNE 536
Query: 436 KGLIKPPGSSRI 447
G+ K G S I
Sbjct: 537 NGITKICGRSWI 548
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 188/394 (47%), Gaps = 19/394 (4%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+HA+I++ G + +N +F ++ S S L+Y+ + P+ +Y +N +++ Y
Sbjct: 28 QIHARIIRKGLEQD---QNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGY 84
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
S + F +S+ + M+R G+ PD +TFP V+K C+ R G +HG + +
Sbjct: 85 S---NKFLFFETVSILMRMMRT---GLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLR 138
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
+GF D + + + Y DL AR++F MP+R+ VSWT+L+ V EA +
Sbjct: 139 IGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSM 198
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
F M E + +A V +++ SG L +K+ + ++ I T++ID YA
Sbjct: 199 FDLMPERNLGSWNALVDGLVK----SGDLVNAKKLFDEMPKRDIIS-----YTSMIDGYA 249
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
K G + SA W+A+I G A +G EA +F EM NVKPDE M
Sbjct: 250 KGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVG 309
Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
++SAC V S + +R + ++D+ A+ G + A MP +
Sbjct: 310 LMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR 369
Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
D V + +++ +H A RL ++ ++ G+
Sbjct: 370 -DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGI 402
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 117/247 (47%), Gaps = 9/247 (3%)
Query: 40 SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
+ GD+ AR L ++ ++ ++ Y+ + P F +F M +
Sbjct: 249 AKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAF---KVFSEMCAKNVK---- 301
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFI-TKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
PD F ++ C+++ +++ ++ +M S Y++ ALI M + G + A +
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
LF+ MP RD+VS+ S+++G+ H EAI LF +M++ G+ ++ +L+ C S
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMI 277
+ G + ++++K I + + ++++ +++G ++ A W +++
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 278 SGLASHG 284
G + HG
Sbjct: 482 GGCSLHG 488
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 185/365 (50%), Gaps = 16/365 (4%)
Query: 100 PDNFTFPFVLKCCARLKLARQ-GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
P+ T VL C L K++HGF + G +D + A + MY G++ ++R
Sbjct: 249 PNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRV 308
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
LF+ RDVV W+S+I G + E + L +M + G+E N T+++++ AC +S
Sbjct: 309 LFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTL 368
Query: 219 LSMGRKVHGIVKEKKRIECKCN------VSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
LS VH + KC + ALIDMYAK G + +A
Sbjct: 369 LSFASTVHSQI-------LKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVS 421
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
W++MI+ HG EA+++F M + D+ A+LSAC +A LV EA +F+
Sbjct: 422 WSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAG 481
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
K Y + T++H+ C ++LL R G + +A + MPMKP A +W +L+ AC+ H + A
Sbjct: 482 K-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVA 540
Query: 393 ERLMKQHL-EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDG 451
+++ L + D+ +Y+L S ++ G + EVR +M ++ L K G S+IE +
Sbjct: 541 GKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPEL 600
Query: 452 ALHEF 456
+ ++
Sbjct: 601 QIEDY 605
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 154/358 (43%), Gaps = 30/358 (8%)
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCA-RLKLARQ 120
+Y+ LR Y L H+L T+G A P V+K CA + +
Sbjct: 25 FYDEALRLYKLK------IHSLG---------TNGFTA----ILPSVIKACAFQQEPFLL 65
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
G QLH K G D + N+LI MY+ F R++FD M RD VS+ S+I+
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS-MGRKVHGIVKEKKRIECKC 239
EA++L M G V S+L C G+ S + R H +V +R++
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
+STAL+DMY K +A WTAMISG ++ + +DLF M+
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 300 NVKPDERTMTAVLSAC----RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
N++P+ T+ +VL AC + LV+E + R+G + + + R G
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLVKEIH----GFSFRHGCHADERLTAAFMTMYCRCG 301
Query: 356 CLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
+ + ++ D V+W ++I D L+ Q + G++ + +LA
Sbjct: 302 NVSLSRVLFETSKVR-DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 141/311 (45%), Gaps = 21/311 (6%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G+++ +R+L ++ + +++M+ Y+ + D + + L+ +R+ G+ A ++
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLN----QMRK--EGIEA-NS 353
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T ++ C L +H I K GF S + NALI MY+ G L ARE+F
Sbjct: 354 VTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE 413
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
+ ++D+VSW+S+I+ H EA+E+F M++ G EV+D +++L AC +G +
Sbjct: 414 LTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEA 473
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGLA 281
+ + K + I++ + G I+ A W++++S
Sbjct: 474 QTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACE 532
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN-------ADLVREAYMVFSDMKKR 334
+HG A + + E +PD +LS A+ VR M + K
Sbjct: 533 THGRLDVAGKI-IANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRV-MQRRKLNKC 590
Query: 335 YG---IEPTIQ 342
YG IEP +Q
Sbjct: 591 YGFSKIEPELQ 601
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 201/446 (45%), Gaps = 53/446 (11%)
Query: 83 LSLFIFMLRRPTHGVPAPDNFTFPFVLKCC-ARLKLARQGKQLHGFITKMGFGSDCYIMN 141
LSLF ML PD +TF ++ C A G+ +H + K G+ S N
Sbjct: 189 LSLFKEMLESEFK----PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 142 ALIHMYSVFG-------------------------------DLGVARELFDRMPDRDVVS 170
+++ Y+ G + A E+F P++++V+
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 171 WTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVK 230
WT++I G + +A+ F M+++GV+ + +VL AC+ L G+ +HG +
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL- 363
Query: 231 EKKRIECKCN----VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC 286
I C V AL+++YAK G I+ A W M+ HGL
Sbjct: 364 ----IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLA 419
Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
+A+ L+ M +KPD T +L+ C ++ LV E M+F M K Y I + H C
Sbjct: 420 DQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTC 479
Query: 347 VVDLLARAGCLKEAED----FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
++D+ R G L EA+D + + + + W TL+ AC H TE + K
Sbjct: 480 MIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIA 539
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
+ S++L SN+Y S G+W +VR M ++G+ K PG S IEV + FV+GD +
Sbjct: 540 EPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSS 599
Query: 463 HPEADNIFVKLDEMVDKLKKEGYNPK 488
HP + +L E ++ L+ E NP+
Sbjct: 600 HPRLE----ELSETLNCLQHEMRNPE 621
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 177/432 (40%), Gaps = 73/432 (16%)
Query: 37 AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHG 96
A+L+ SG + AR + P L++ +NTML +YS H A++LF LR
Sbjct: 12 ASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYS---RLGLHQEAIALFT-QLRFSD-- 65
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS-------- 148
PD+++F +L CA L + G+++ + + GF + + N+LI MY
Sbjct: 66 -AKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 149 --VFGDL-----------------------GVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
VF D+ A ++F MP R +W +I G +
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRAC-ADSGALSMGRKVHGI-------------- 228
+ LF MLE+ + + T S++ AC ADS + GR VH +
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 229 ---------------VKEKKRIECKCNVS-TALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
++E + IE VS ++ID K G E A
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
WT MI+G +G ++A+ F+EM V D AVL AC L+ M+ +
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL- 363
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
G + +V+L A+ G +KEA+ + K D V W T+++A VH ++A
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFAFGVHGLADQA 422
Query: 393 ERLMKQHLEMGV 404
+L + G+
Sbjct: 423 LKLYDNMIASGI 434
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 56 PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
P N + TM+ Y + D AL F+ M++ GV + D+F + VL C+ L
Sbjct: 298 PEKNIVTWTTMITGYGRNGDGEQ---ALRFFVEMMKS---GVDS-DHFAYGAVLHACSGL 350
Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI 175
L GK +HG + GF Y+ NAL+++Y+ GD+ A F + ++D+VSW +++
Sbjct: 351 ALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTML 410
Query: 176 DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
H +A++L+ M+ +G++ ++ T + +L C+ SG + G + + + RI
Sbjct: 411 FAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRI 470
Query: 236 ECKCNVSTALIDMYAKSGCIESA 258
+ + T +IDM+ + G + A
Sbjct: 471 PLEVDHVTCMIDMFGRGGHLAEA 493
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 228/502 (45%), Gaps = 51/502 (10%)
Query: 5 TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
+++ Q+HA+++ TS N +++ + + S GD +Y + S L Y N
Sbjct: 34 SITHLFQVHARLI---TSGNFWDSSWA-IRLLKSSSRFGDSSYTVSIYRSIGKL--YCAN 87
Query: 65 TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
+ +AY +SS P AL + +LR PD++TF ++ C + GK
Sbjct: 88 PVFKAYLVSSSPKQ---ALGFYFDILRFGF----VPDSYTFVSLISCIEKTCCVDSGKMC 140
Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH--- 181
HG K G + N+L+HMY+ G L +A++LF +P RD+VSW S+I G+V +
Sbjct: 141 HGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDV 200
Query: 182 ----------------------------DRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
+ P +I LF M+ AG + N++T+V +L AC
Sbjct: 201 LAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNAC 260
Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
S L GR VH + + + + TALIDMY K + A W
Sbjct: 261 GRSARLKEGRSVHASLI-RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTW 319
Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
MI HG + ++LF M ++PDE T VL C A LV + +S M
Sbjct: 320 NVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVD 379
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP---MKPDAVLWRTLIWACKVHEDTE 390
+ I+P H C+ +L + AG +EAE+ + +P + P++ W L+ + + +
Sbjct: 380 EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPT 439
Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
E + K +E + Y L N+Y+ G+W + VRE++ ++ + + PG +++
Sbjct: 440 LGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLK 499
Query: 451 GALHEFVMGDYNHPEADNIFVK 472
+H +G EA+ +F +
Sbjct: 500 EIVHGLRLG---CKEAEKVFTE 518
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 175/336 (52%), Gaps = 17/336 (5%)
Query: 56 PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
P ++ +N + + Y+ D F HGV PD+ T +L+ CA
Sbjct: 463 PIKDAVAFNALAQGYTQIGDANKAFDVYK------NMKLHGV-CPDSRTMVGMLQTCAFC 515
Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP-DRDVVSWTSL 174
+G ++G I K GF S+C++ +ALI+M++ L A LFD+ ++ VSW +
Sbjct: 516 SDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIM 575
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
++G + H + EA+ F +M + N T V+++RA A+ AL +G VH +
Sbjct: 576 MNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL----- 630
Query: 235 IEC----KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAI 290
I+C + V +L+DMYAK G IES+ W M+S A+HGL A+
Sbjct: 631 IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAV 690
Query: 291 DLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDL 350
LFL M+ +KPD + +VLSACR+A LV E +F +M +R+ IE ++H+ C+VDL
Sbjct: 691 SLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDL 750
Query: 351 LARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
L +AG EA + M M +K +W L+ + ++H
Sbjct: 751 LGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 141/296 (47%), Gaps = 17/296 (5%)
Query: 10 LQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
LQ+H ++ G ++ N LF LS R++ S +N+M+R
Sbjct: 22 LQVHGSLIVSGLKPHNQLINAYSLFQRQDLS--------RVIFDSVRDPGVVLWNSMIRG 73
Query: 70 YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
Y+ + H AL F +M G+ PD ++F F LK CA ++G ++H I
Sbjct: 74 YTRAG---LHREALGFFGYM--SEEKGID-PDKYSFTFALKACAGSMDFKKGLRIHDLIA 127
Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
+MG SD YI AL+ MY DL AR++FD+M +DVV+W +++ GL + A+
Sbjct: 128 EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL 187
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
LF M V+++ ++ +++ A + + R +HG+V +K I S+ LIDMY
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA---FSSGLIDMY 244
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
+ +A W M++ A +G +E ++LF M +V+ ++
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK 300
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 4/280 (1%)
Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
+G +H + + G D + +L+ MYS G+L +A +LF + DRDVVSW+++I
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYE 377
Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
+ EAI LF M+ ++ N T+ SVL+ CA A +G+ +H K IE +
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIH-CYAIKADIESEL 436
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
+TA+I MYAK G A + A+ G G +A D++ M+
Sbjct: 437 ETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH 496
Query: 300 NVKPDERTMTAVLSACR-NADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
V PD RTM +L C +D R + + +K + E + H ++++ + L
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALA 554
Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
A + + V W ++ +H E A +Q
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQ 594
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 11/348 (3%)
Query: 40 SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
S G+L A L + + ++ M+ +Y H A+SLF M+R
Sbjct: 346 SKCGELEIAEQLFINIEDRDVVSWSAMIASYE---QAGQHDEAISLFRDMMRIHIK---- 398
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+ T VL+ CA + +R GK +H + K S+ A+I MY+ G A +
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKA 458
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F+R+P +D V++ +L G +A +++ M GV + T+V +L+ CA
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDY 518
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX-XXXXXXXXXXWTAMIS 278
+ G V+G + K + +C+V+ ALI+M+ K + +A W M++
Sbjct: 519 ARGSCVYGQII-KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
G HG +EA+ F +M+ +P+ T ++ A +R V S + + G
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ-CGFC 636
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+VD+ A+ G ++ +E + K V W T++ A H
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKY-IVSWNTMLSAYAAH 683
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 205/404 (50%), Gaps = 10/404 (2%)
Query: 81 HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIM 140
A+ ++ +LR T P PD +TF + A + GK LHG +TK+G+ ++
Sbjct: 384 QAMLMYRRLLRMST---PRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
L+ MY + A+++FD M +RDVV WT +I G A++ F M
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
+ ++ SV+ AC+D L G H + + +C +V AL+DMY K+G E+A
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQGEVFHCLAI-RTGFDCVMSVCGALVDMYGKNGKYETAET 559
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
W +M+ + HG+ ++A+ F ++ PD T ++L+AC +
Sbjct: 560 IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGS 619
Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM-NAMPMKPDAVLWRTL 379
+ +++ MK++ GI+ +H+ C+V+L+++AG + EA + + + P A LWRTL
Sbjct: 620 TLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTL 678
Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
+ AC + + +Q L++ +D+ ++IL SN+YA G+W + AE+R +
Sbjct: 679 LSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASS 738
Query: 440 KPPGSSRIEV-DGALHEFVMGDYNHPEADNIFVKLDEMVDKLKK 482
K PG S IEV + F GD ++PE + + + +++LK+
Sbjct: 739 KDPGLSWIEVNNNNTQVFSSGDQSNPE---VVSQAQDELNRLKR 779
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 176/384 (45%), Gaps = 17/384 (4%)
Query: 1 MEVTTMSEALQLHAQILKLGT-SNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALN 59
+ +T + A Q+HA +L G + ++P + L + G L AR + P N
Sbjct: 105 VSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYV--RCGSLEQARKVFDKMPHRN 162
Query: 60 SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
YN + AYS +P +A L M P++ TF +++ CA L+
Sbjct: 163 VVSYNALYSAYS--RNPDFASYAFPLTTHM----AFEYVKPNSSTFTSLVQVCAVLEDVL 216
Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
G L+ I K+G+ + + +++ MYS GDL AR +FD + +RD V+W ++I G +
Sbjct: 217 MGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
+D+ + + F ML +GV+ T VL C+ G+ S+G+ +H + +
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL-ADL 335
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF---LEM 296
+ AL+DMY G + A W ++ISG + +G ++A+ ++ L M
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
T +PDE T +A +SA + ++ + K G E ++ ++ + +
Sbjct: 396 ST--PRPDEYTFSAAISATAEPERFVHGKLLHGQVTK-LGYERSVFVGTTLLSMYFKNRE 452
Query: 357 LKEAEDFMNAMPMKPDAVLWRTLI 380
+ A+ + M + D VLW +I
Sbjct: 453 AESAQKVFDVMKER-DVVLWTEMI 475
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 124/298 (41%), Gaps = 14/298 (4%)
Query: 138 YIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSL--IDGLVDHDRPV--EAIELFGR 193
Y N LI MY L AR++FD+MP R++V+ L + V + + I+L
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 194 MLEAGVEVND--ATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VSTALIDMY 249
+ + +N+ ++VV + R C L R++H +V + + LI MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH-GLCKEAIDLFLEMETCNVKPDERTM 308
+ G +E A + A+ S + + A L M VKP+ T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 309 TAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
T+++ C D++ + + +K Y +Q V+ + + G L+ A + +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQT--SVLGMYSSCGDLESARRIFDCV 260
Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG-SYILASNVYASVGKWS 424
+ DAV W T+I ++ E + L GVD + +Y + N + +G +S
Sbjct: 261 NNR-DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 190/374 (50%), Gaps = 7/374 (1%)
Query: 109 LKCCARLKLARQGKQLHGFITK-MGFGSDC-YIMNALIHMYSVFGDLGVARELFDRMPDR 166
LK C+ + + GK H + + F D + N+LI MYS DL A +F ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
+ +W S+I G ++R E L ML +G N T+ S+L A G L G++ H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC 286
+ ++ + + +L+DMYAKSG I +A +T++I G G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
+ A+ F +M+ +KPD TM AVLSAC +++LVRE + +F+ M+ +GI ++H+ C
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSC 566
Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM-KQHLEMGVD 405
+VDL RAG L +A D + +P +P + + TL+ AC +H +T E K LE +
Sbjct: 567 MVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPE 626
Query: 406 DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPE 465
G Y+L +++YA G WS V+ L++ G+ K + +E D L G+ N P
Sbjct: 627 HLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPM 682
Query: 466 ADNIFVKLDEMVDK 479
D+ + ++ D+
Sbjct: 683 NDDSVINQEQSSDE 696
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 175/406 (43%), Gaps = 48/406 (11%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
QLHA + G + KL TF S L+ A+ + ++ L+ +N ++ +Y
Sbjct: 104 QLHAHCISSGLEFDSVL--VPKLVTF--YSAFNLLDEAQTITENSEILHPLPWNVLIGSY 159
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ ++S++ M+ + G+ A D FT+P V+K CA L G+ +HG I
Sbjct: 160 IRNKRFQE---SVSVYKRMMSK---GIRA-DEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
+ Y+ NALI MY FG + VAR LFDRM +RD VSW ++I+ ++ EA +L
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 191 FGRMLEAGVE-----------------------------------VNDATVVSVLRACAD 215
RM +GVE + +++ L+AC+
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 216 SGALSMGRKVHGIVKEKKRIECKC-NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
GAL G+ H +V NV +LI MY++ + A W
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN 392
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
++ISG A + +E L EM P+ T+ ++L ++ + +R
Sbjct: 393 SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ + + +VD+ A++G + A+ ++M K D V + +LI
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM-RKRDKVTYTSLI 497
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L C G+QLH G D ++ L+ YS F L A+ + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
+ W LI + + R E++ ++ RM+ G+ ++ T SV++ACA + GR VHG
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+ E C V ALI MY + G ++ A W A+I+ S
Sbjct: 209 SI-EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
EA L M V+ T + C A
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 190/374 (50%), Gaps = 7/374 (1%)
Query: 109 LKCCARLKLARQGKQLHGFITK-MGFGSDC-YIMNALIHMYSVFGDLGVARELFDRMPDR 166
LK C+ + + GK H + + F D + N+LI MYS DL A +F ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
+ +W S+I G ++R E L ML +G N T+ S+L A G L G++ H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC 286
+ ++ + + +L+DMYAKSG I +A +T++I G G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
+ A+ F +M+ +KPD TM AVLSAC +++LVRE + +F+ M+ +GI ++H+ C
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSC 566
Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM-KQHLEMGVD 405
+VDL RAG L +A D + +P +P + + TL+ AC +H +T E K LE +
Sbjct: 567 MVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPE 626
Query: 406 DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPE 465
G Y+L +++YA G WS V+ L++ G+ K + +E D L G+ N P
Sbjct: 627 HLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPM 682
Query: 466 ADNIFVKLDEMVDK 479
D+ + ++ D+
Sbjct: 683 NDDSVINQEQSSDE 696
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 175/406 (43%), Gaps = 48/406 (11%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
QLHA + G + KL TF S L+ A+ + ++ L+ +N ++ +Y
Sbjct: 104 QLHAHCISSGLEFDSVL--VPKLVTF--YSAFNLLDEAQTITENSEILHPLPWNVLIGSY 159
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ ++S++ M+ + G+ A D FT+P V+K CA L G+ +HG I
Sbjct: 160 IRNKRFQE---SVSVYKRMMSK---GIRA-DEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
+ Y+ NALI MY FG + VAR LFDRM +RD VSW ++I+ ++ EA +L
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 191 FGRMLEAGVE-----------------------------------VNDATVVSVLRACAD 215
RM +GVE + +++ L+AC+
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 216 SGALSMGRKVHGIVKEKKRIECKC-NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
GAL G+ H +V NV +LI MY++ + A W
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN 392
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
++ISG A + +E L EM P+ T+ ++L ++ + +R
Sbjct: 393 SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
+ + + +VD+ A++G + A+ ++M K D V + +LI
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM-RKRDKVTYTSLI 497
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+L C G+QLH G D ++ L+ YS F L A+ + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
+ W LI + + R E++ ++ RM+ G+ ++ T SV++ACA + GR VHG
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+ E C V ALI MY + G ++ A W A+I+ S
Sbjct: 209 SI-EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
EA L M V+ T + C A
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 189/425 (44%), Gaps = 57/425 (13%)
Query: 3 VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
V +S Q+H ++K G N L F A G+L +RL N
Sbjct: 329 VQLLSCGRQIHGMLIKNGCETGIVLGN--ALIDFYA--KCGNLEDSRLCFDYIRDKNIVC 384
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N +L Y+ P LSLF+ ML+ P +TF LK C +L +
Sbjct: 385 WNALLSGYANKDGPI----CLSLFLQMLQMGFR----PTEYTFSTALKSCCVTEL----Q 432
Query: 123 QLHGFITKMGFGSDCYIMNALIH--------------------------------MYSVF 150
QLH I +MG+ + Y++++L+ +YS
Sbjct: 433 QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRR 492
Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
G + +L + D VSW I D E IELF ML++ + + T VS+L
Sbjct: 493 GQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSIL 552
Query: 211 RACADSGALSMGRKVHGIVKEKKRIECK----CNVSTALIDMYAKSGCIESAXXXXXXXX 266
C+ L++G +HG++ K C CNV LIDMY K G I S
Sbjct: 553 SLCSKLCDLTLGSSIHGLIT-KTDFSCADTFVCNV---LIDMYGKCGSIRSVMKVFEETR 608
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
WTA+IS L HG +EA++ F E + KPD + ++L+ACR+ +V+E
Sbjct: 609 EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMG 668
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+F MK YG+EP + H+ C VDLLAR G LKEAE + MP DA +WRT + C
Sbjct: 669 LFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRF 727
Query: 387 EDTER 391
+ +R
Sbjct: 728 AEEQR 732
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 146/347 (42%), Gaps = 34/347 (9%)
Query: 87 IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
+F R + +F VLK + +K KQLH TK G + ++N+LI
Sbjct: 200 MFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISA 259
Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
Y G+ +A +F D+VSW ++I + P++A++LF M E G N T
Sbjct: 260 YGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTY 319
Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
VSVL + LS GR++HG++ K E + ALID YAK G +E +
Sbjct: 320 VSVLGVSSLVQLLSCGRQIHGMLI-KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR 378
Query: 267 XXXXXXWTAMISGLASHG--LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL---- 320
W A++SG A+ +C + LFL+M +P E T + L +C +L
Sbjct: 379 DKNIVCWNALLSGYANKDGPIC---LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLH 435
Query: 321 ---VREAY----MVFSDMKKRYGIE---------------PT-IQHFGCVVDLLARAGCL 357
VR Y V S + + Y PT + V + +R G
Sbjct: 436 SVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQY 495
Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
E+ ++ + +PD V W I AC + E L K L+ +
Sbjct: 496 HESVKLISTLE-QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNI 541
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 168/397 (42%), Gaps = 42/397 (10%)
Query: 37 AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHG 96
+A G+ + A + + + +N ++ A + S +P AL LF+ M P HG
Sbjct: 258 SAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENP---LKALKLFVSM---PEHG 311
Query: 97 VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
+P+ T+ VL + ++L G+Q+HG + K G + + NALI Y+ G+L +
Sbjct: 312 F-SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA-- 214
R FD + D+++V W +L+ G + D P+ + LF +ML+ G + T + L++C
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVT 429
Query: 215 -----DSGALSMGRKVHG-IVKEKKRIECK---CNVSTALID----------------MY 249
S + MG + + ++ R K N + L+D +Y
Sbjct: 430 ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIY 489
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
++ G + W I+ + +E I+LF M N++PD+ T
Sbjct: 490 SRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFV 549
Query: 310 AVLSACRN-ADLVREAYMVFSDMKKRYGIEPTIQHFGC--VVDLLARAGCLKEAEDFMNA 366
++LS C DL + + K + T F C ++D+ + G ++
Sbjct: 550 SILSLCSKLCDLTLGSSIHGLITKTDFSCADT---FVCNVLIDMYGKCGSIRSVMKVFEE 606
Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
K + + W LI +H + A K+ L +G
Sbjct: 607 TREK-NLITWTALISCLGIHGYGQEALEKFKETLSLG 642
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 151/362 (41%), Gaps = 14/362 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
G+++ A + P N +NT+++ YS D + S + P +
Sbjct: 63 GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSG-- 120
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMG-FGSDCYIMNALIHMYSVFGDLGVARELFD 161
L CA L + R G QLHG K G F +D ++ L+ +Y L +A ++F+
Sbjct: 121 ------LLSCASLDV-RAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFE 173
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
MP + + +W ++ L E + F ++ G + +++ + VL+ + L +
Sbjct: 174 DMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDI 233
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
+++H KK ++C+ +V +LI Y K G A W A+I A
Sbjct: 234 SKQLH-CSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
+A+ LF+ M P++ T +VL L+ + + K G E I
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGI 351
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
++D A+ G L+++ + + K + V W L+ + ++D L Q L+
Sbjct: 352 VLGNALIDFYAKCGNLEDSRLCFDYIRDK-NIVCWNALL-SGYANKDGPICLSLFLQMLQ 409
Query: 402 MG 403
MG
Sbjct: 410 MG 411
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 13/305 (4%)
Query: 138 YIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
Y+ N +I +Y G++ +A ++FD+MP+R+ VS+ ++I G + +A +F M
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
G N +T VS L +CA S + G ++HG+ + V T L+ +Y + +E
Sbjct: 110 GYLPNQST-VSGLLSCA-SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVL---SA 314
A W M+S L G KE + F E+ E + VL S
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED-FMNAMPMKPDA 373
++ D+ ++ + S KK G++ I ++ + G AE F +A D
Sbjct: 228 VKDLDISKQLHC--SATKK--GLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW--DI 281
Query: 374 VLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEVREL 432
V W +I A E+ +A +L E G + G+Y+ V + V S ++ +
Sbjct: 282 VSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGM 341
Query: 433 MNKKG 437
+ K G
Sbjct: 342 LIKNG 346
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 205/440 (46%), Gaps = 20/440 (4%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+H +K G N T S D A + S + +NTM+ +Y
Sbjct: 309 QVHGLAIKTGYEKYTLVSNA----TMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSY 364
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ + A+S++ R GV PD FTF +L L + + + I K
Sbjct: 365 NQAKLGKS---AMSVY---KRMHIIGVK-PDEFTFGSLLATSLDLDVL---EMVQACIIK 414
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
G S I NALI YS G + A LF+R ++++SW ++I G + P E +E
Sbjct: 415 FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 191 FGRMLEAGVEV--NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
F +LE+ V + + T+ ++L C + +L +G + H V + + + + ALI+M
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFK-ETLIGNALINM 533
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKPDERT 307
Y++ G I+++ W ++IS + HG + A++ + M+ V PD T
Sbjct: 534 YSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAAT 593
Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF--MN 365
+AVLSAC +A LV E +F+ M + +G+ + HF C+VDLL RAG L EAE ++
Sbjct: 594 FSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKIS 653
Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
+ +W L AC H D + + + K +E DD Y+ SN+YA G W
Sbjct: 654 EKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKE 713
Query: 426 KAEVRELMNKKGLIKPPGSS 445
E R +N G +K G S
Sbjct: 714 AEETRRAINMIGAMKQRGCS 733
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 30/345 (8%)
Query: 84 SLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNAL 143
SL +F R+ P + TF V+ C+ A G Q+HG K G+ + NA
Sbjct: 275 SLLVF--RKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNAT 329
Query: 144 IHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVND 203
+ MYS F D G A ++F+ + ++D+V+W ++I A+ ++ RM GV+ ++
Sbjct: 330 MTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Query: 204 ATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXX 263
T S+L D L M + I+K + K +S ALI Y+K+G IE A
Sbjct: 390 FTFGSLLATSLDLDVLEMVQAC--IIKFG--LSSKIEISNALISAYSKNGQIEKADLLFE 445
Query: 264 XXXXXXXXXWTAMISGLASHGLCKEAIDLF---LEMETCNVKPDERTMTAVLSACRNADL 320
W A+ISG +G E ++ F LE E + PD T++ +LS C +
Sbjct: 446 RSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV-RILPDAYTLSTLLSICVSTSS 504
Query: 321 V-----REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL 375
+ AY++ R+G ++++ ++ G ++ + + N M K D V
Sbjct: 505 LMLGSQTHAYVL------RHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK-DVVS 557
Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
W +LI A H + E A K + D G I + +++V
Sbjct: 558 WNSLISAYSRHGEGENAVNTYKT-----MQDEGKVIPDAATFSAV 597
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 161/361 (44%), Gaps = 25/361 (6%)
Query: 25 DAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY-YYNTMLRAYSLSSDPTHHFHAL 83
D P +S +A GD+ YA + P + +N M+ + +H ++
Sbjct: 119 DEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITG---CKESGYHETSV 175
Query: 84 SLFIFMLRRPTHGVPAP-DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNA 142
LF R H + D F F +L C L GKQ+H + K GF ++NA
Sbjct: 176 ELF-----REMHKLGVRHDKFGFATILSMCDYGSLDF-GKQVHSLVIKAGFFIASSVVNA 229
Query: 143 LIHMY---SVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV 199
LI MY V D + E D + RD V++ +IDGL R E++ +F +MLEA +
Sbjct: 230 LITMYFNCQVVVDACLVFEETD-VAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASL 287
Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
D T VSV+ +C+ +MG +VHG+ K E VS A + MY+ +A
Sbjct: 288 RPTDLTFVSVMGSCS---CAAMGHQVHGLAI-KTGYEKYTLVSNATMTMYSSFEDFGAAH 343
Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
W MIS L K A+ ++ M VKPDE T ++L+ + D
Sbjct: 344 KVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
++ MV + + K +G+ I+ ++ ++ G +++A D + ++ + + W +
Sbjct: 404 VLE---MVQACIIK-FGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAI 458
Query: 380 I 380
I
Sbjct: 459 I 459
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 154/391 (39%), Gaps = 55/391 (14%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD ++ + L+ G Q+H + + G ++ N L+ +Y G+L ++
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 160 FDRMPDRDVVSWTSLIDG---LVDHDRPVE-----------------------------A 187
FD + + DV SWT+L+ L D + E +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
+ELF M + GV + ++L C D G+L G++VH +V K +V ALI
Sbjct: 175 VELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVI-KAGFFIASSVVNALIT 232
Query: 248 MYAKSGCIESA--XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
MY + A + +I GLA E++ +F +M +++P +
Sbjct: 233 MYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTD 291
Query: 306 RTMTAVLSACRNADLVREAY-MVFSDMKKRYGI--EPTIQHFGCVVDLLARAGCLKEAED 362
T +V+ +C A + + + + ++Y + T+ + D A + E+
Sbjct: 292 LTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEE 351
Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGK 422
D V W T+I + + + A + K+ +GV + S+
Sbjct: 352 --------KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPD------EFTFGSLLA 397
Query: 423 WSNKAEVRELMNKKGLIKPPGSSRIEVDGAL 453
S +V E M + +IK SS+IE+ AL
Sbjct: 398 TSLDLDVLE-MVQACIIKFGLSSKIEISNAL 427
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 189/414 (45%), Gaps = 38/414 (9%)
Query: 176 DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKR 234
D H + +A+ + V+ + ++ + + C ++ L + VHG I
Sbjct: 227 DAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSH 286
Query: 235 IECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFL 294
++ N L++MY+ G A W +I A +G ++AID+F
Sbjct: 287 LDLSSN--HVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFS 344
Query: 295 EMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
+ PD + + AC V E + F M + YGI P+I+ + +V++ A
Sbjct: 345 RFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALP 404
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAE------------RLMKQHLEM 402
G L EA +F+ MPM+P+ +W TL+ +VH + E + RL KQ E
Sbjct: 405 GFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREG 464
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
+ + AS+V E L + G++ SS + EF GD N
Sbjct: 465 FIP-----VKASDV-----------EKESLKKRSGILHGVKSS-------MQEFRAGDTN 501
Query: 463 HPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTS 522
PE D +F L + + + GY + L +ID E K T LL HSE++A A ++ ++
Sbjct: 502 LPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSA 561
Query: 523 QGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
++KNLR C DCH +K++S I R++I RD RFH KNG C+CKDYW
Sbjct: 562 PRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 191/414 (46%), Gaps = 37/414 (8%)
Query: 65 TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
++ + S ++ +H AL+LF+ M + +P D F LK CA G +
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQM--HSSFALPL-DAHVFSLALKSCAAAFRPVLGGSV 70
Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID-------- 176
H K F S+ ++ AL+ MY + AR+LFD +P R+ V W ++I
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 177 ------------------------GLV-DHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
GLV D AIE + +M+E + N T+++++
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX 271
AC+ GA + +++H + IE + + L++ Y + G I
Sbjct: 191 ACSAIGAFRLIKEIHSYAF-RNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
W+++IS A HG + A+ F EME V PD+ VL AC +A L EA + F M
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
+ YG+ + H+ C+VD+L+R G +EA + AMP KP A W L+ AC+ + + E
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 392 AERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
AE ++ L + ++ +Y+L +Y SVG+ +R M + G+ PGSS
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 165/300 (55%), Gaps = 7/300 (2%)
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRM----PDRDVVSWTSLIDGLVDHDRPVE 186
+G D NALI +S + E+ + M DVVSWTS+I GLV + + +
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
A + F +ML G+ N AT++++L AC + G+++HG +E V +AL+
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG-YSVVTGLEDHGFVRSALL 330
Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
DMY K G I A + +MI A+HGL +A++LF +ME K D
Sbjct: 331 DMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHL 390
Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
T TA+L+AC +A L +F M+ +Y I P ++H+ C+VDLL RAG L EA + + A
Sbjct: 391 TFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKA 450
Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL-EMGVDDSGSYILASNVYASVGKWSN 425
M M+PD +W L+ AC+ H + E A R+ +HL E+ ++SG+ +L +++YA+ G W +
Sbjct: 451 MRMEPDLFVWGALLAACRNHGNMELA-RIAAKHLAELEPENSGNGLLLTSLYANAGSWES 509
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
S+ S H+F F + THG+ P++ T +L C L + GK++HG+
Sbjct: 258 SIISGLVHNFQNEKAFDAFKQMLTHGL-YPNSATIITLLPACTTLAYMKHGKEIHGYSVV 316
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
G ++ +AL+ MY G + A LF + P + V++ S+I +H +A+EL
Sbjct: 317 TGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVEL 376
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
F +M G +++ T ++L AC+ +G +G+ + +++ K RI + ++D+
Sbjct: 377 FDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLG 436
Query: 251 KSG-CIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
++G +E+ W A+++ +HG
Sbjct: 437 RAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 11/307 (3%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
+++ R +L +G+ LH + G I L+ Y G + AR++FD MP RD
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRD 81
Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
+ +I + E+++ F M + G++++ V S+L+A + G+ +H
Sbjct: 82 ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHC 141
Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+V K E + ++LIDMY+K G + +A + AMISG A++
Sbjct: 142 LVL-KFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQAD 200
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSA---CRNADLVREAYMVFSDMKKRYGIEPTIQHF 344
EA++L +M+ +KPD T A++S RN + V E ++ G +P + +
Sbjct: 201 EALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL----ELMCLDGYKPDVVSW 256
Query: 345 GCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
++ L ++A D M + P++ TL+ AC + + + +
Sbjct: 257 TSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVV 316
Query: 402 MGVDDSG 408
G++D G
Sbjct: 317 TGLEDHG 323
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 153/362 (42%), Gaps = 63/362 (17%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D F P +LK L GK +H + K + SD +I+++LI MYS FG++G AR++F
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
+ ++D+V + ++I G ++ + EA+ L M G++ + T +++ SG
Sbjct: 176 SDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALI-----SGFSH 230
Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
M + K + +E C +D Y WT++ISGL
Sbjct: 231 MRNE----EKVSEILELMC------LDGYKPD-----------------VVSWTSIISGL 263
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
+ ++A D F +M T + P+ T+ +L AC AYM Y +
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL-----AYMKHGKEIHGYSVVTG 318
Query: 341 IQHFGCV----VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
++ G V +D+ + G + EA P K V + ++I+ H ++A L
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTP-KKTTVTFNSMIFCYANHGLADKAVELF 377
Query: 397 KQ---------HLEM----------GVDDSGS--YILASNVYASVGKWSNKAEVRELMNK 435
Q HL G+ D G ++L N Y V + + A + +L+ +
Sbjct: 378 DQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGR 437
Query: 436 KG 437
G
Sbjct: 438 AG 439
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 188/384 (48%), Gaps = 40/384 (10%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS----------V 149
P++ TF + CA L + G+QLHG + K F + + ALI MYS V
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 150 FGDLGVAR----------------------ELFDRMPDR----DVVSWTSLIDGLVDHDR 183
F +L R ELF+++ D +W SLI G +
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
+EA + F RML + + + S+L AC+D L G+++HG V K E V T
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVI-KAAAERDIFVLT 407
Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXX--XXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
+LIDMY K G A W MISG HG C+ AI++F + V
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKV 467
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
+P T TAVLSAC + V + +F M++ YG +P+ +H GC++DLL R+G L+EA+
Sbjct: 468 EPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAK 527
Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
+ ++ M +V +L+ +C+ H D E + E+ ++ +++ S++YA++
Sbjct: 528 EVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALE 586
Query: 422 KWSNKAEVRELMNKKGLIKPPGSS 445
+W + +R+++++K L+K PG S
Sbjct: 587 RWEDVESIRQVIDQKQLVKLPGLS 610
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 13/329 (3%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
+P+ FTFP +LK CA+L QG+ LH + K GF D + AL+ MY + A +
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
+ D MP+R + S + + GL+++ +A +FG +G +N TV SVL C D
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD--- 144
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
+ G ++H + K E + V T+L+ MY++ G A + A IS
Sbjct: 145 IEGGMQLHCLAM-KSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 279 GLASHGLCKEAIDLF-LEMETCNVKPDERTMTAVLSACR---NADLVREAYMVFSDMKKR 334
GL +G+ +F L + + +P++ T ++AC N R+ + + MKK
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLV--MKKE 261
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
+ E + ++D+ ++ C K A + + + W ++I ++ E A
Sbjct: 262 FQFETMVGT--ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 395 LMKQHLEMGVD-DSGSYILASNVYASVGK 422
L ++ G+ DS ++ + ++ +GK
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGK 348
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 199/409 (48%), Gaps = 12/409 (2%)
Query: 43 GDLNYARLLL-TSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
GDL A L L T + + +N+++ + S HH +L F M R G D
Sbjct: 527 GDLTSAFLRLETMSETRDLTSWNSVISGCASSG---HHLESLRAFQAMSRE---GKIRHD 580
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
T + L L QG+ HG K D + N LI MY D+ A ++F
Sbjct: 581 LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFG 640
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
+ D ++ SW +I L + E +LF R L+ +E N+ T V +L A G+ S
Sbjct: 641 LISDPNLCSWNCVISALSQNKAGREVFQLF-RNLK--LEPNEITFVGLLSASTQLGSTSY 697
Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
G + H + ++ + VS AL+DMY+ G +E+ W ++IS
Sbjct: 698 GMQAHCHLI-RRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 756
Query: 282 SHGLCKEAIDLFLEMET-CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
HG+ ++A++LF E+ + ++P++ + ++LSAC ++ + E + M++++G++P
Sbjct: 757 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 816
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
+H +VD+L RAG L+EA +F+ + A +W L+ AC H DT+ + + +
Sbjct: 817 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLF 876
Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
EM D++ YI +N Y +G W +R+++ L K PG S I+V
Sbjct: 877 EMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 182/395 (46%), Gaps = 24/395 (6%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
+H LK G + A SKL TF +G+L + L + +N+M+ A
Sbjct: 108 SVHCFALKCGLLQDLATS--SKLLTFYG--RTGELVSSSCLFDELKEKDVIVWNSMITAL 163
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ + + A+ LFI M+ H D+ T + L L+R+ LH +
Sbjct: 164 NQNG---RYIAAVGLFIEMI----HKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIE 216
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
G D + NAL+++Y+ +L A +F M RD+VSW +++ + + P ++++
Sbjct: 217 TGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQY 276
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIV-KEKKRIECKCNVSTALIDMY 249
F M +G E + T V+ AC+ L++G +HG+V K E +V ++I MY
Sbjct: 277 FKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMY 336
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN-VKPDERTM 308
+K G E+A A+++G A++G+ +EA + +M++ + ++PD T+
Sbjct: 337 SKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATV 396
Query: 309 TAVLSACRNADLVRE-----AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
++ S C + RE Y V +M+ R ++ V+D+ + G +AE
Sbjct: 397 VSITSICGDLSFSREGRAVHGYTVRMEMQSR-----ALEVINSVIDMYGKCGLTTQAELL 451
Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
+ D V W ++I A + T +A+ L K+
Sbjct: 452 FKTTTHR-DLVSWNSMISAFSQNGFTHKAKNLFKE 485
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 132/306 (43%), Gaps = 28/306 (9%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIM--NALIHMYSVFGDLGVARE 158
D TF V+ C+ ++ G+ LHG + K G+ + ++ N++I MYS GD A
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-VEVNDATVVSVLRACADSG 217
+F+ + RDV+S ++++G + EA + +M ++ + ATVVS+ C D
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
GR VHG + V ++IDMY K G A W +MI
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMI 467
Query: 278 SGLASHGLCKEAIDLFLEM--ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
S + +G +A +LF E+ E K T+ A+L++C ++D ++F
Sbjct: 468 SAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSD-----SLIFGK----- 517
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV---HEDTERA 392
+ +Q G + R + E D + W ++I C H ++ RA
Sbjct: 518 SVHCWLQKLGDLTSAFLRLETMSETRDLTS----------WNSVISGCASSGHHLESLRA 567
Query: 393 ERLMKQ 398
+ M +
Sbjct: 568 FQAMSR 573
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 6/243 (2%)
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
+ +H F K G D + L+ Y G+L + LFD + ++DV+ W S+I L +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI--ECKC 239
R + A+ LF M+ G E + T++ A + +H + E + C
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
N AL+++YAK + SA W +++ ++G ++++ F M
Sbjct: 227 N---ALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS 283
Query: 300 NVKPDERTMTAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
+ D T + V+SAC + +L + +K Y E + ++ + ++ G +
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 359 EAE 361
AE
Sbjct: 344 AAE 346
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 182/365 (49%), Gaps = 18/365 (4%)
Query: 42 SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
SG AR L P N +N ML Y H + F+ ++R+ + D
Sbjct: 342 SGLTREARELFDLMPERNIVSWNAMLGGYV----HAHEWDEALDFLTLMRQEIENI---D 394
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
N T ++L C+ + + GKQ HGFI + G+ ++ + NAL+ MY G L A F
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFR 454
Query: 162 RMPD-RDVVSWTSLIDGLVDHDRPVEAIELF-GRMLEAGVEVNDATVVSVLRACADSGAL 219
+M + RD VSW +L+ G+ R +A+ F G +EA + + T+ ++L CA+ AL
Sbjct: 455 QMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA--KPSKYTLATLLAGCANIPAL 512
Query: 220 SMGRKVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
++G+ +HG ++++ +I+ + A++DMY+K C + A W ++I
Sbjct: 513 NLGKAIHGFLIRDGYKIDVV--IRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIR 570
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
G +G KE +LF+ +E VKPD T +L AC V + FS M +Y I
Sbjct: 571 GCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHIS 630
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE----RAER 394
P ++H+ C+++L + GCL + E+F+ MP P + + AC+ + ++ A+R
Sbjct: 631 PQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKR 690
Query: 395 LMKQH 399
LM H
Sbjct: 691 LMNDH 695
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 173/407 (42%), Gaps = 51/407 (12%)
Query: 11 QLHAQILKLGTSNN-DAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
QLH ++K G S N D + ++ + + ++ NP+ S+ N ++R
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIV---NPSDVSW--NVIVRR 237
Query: 70 YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
Y + + A+ +F ML P N T V+ C+R GK +H
Sbjct: 238 YL---EMGFNDEAVVMFFKMLELNVR----PLNHTVSSVMLACSRSLALEVGKVIHAIAV 290
Query: 130 KMGFGSDCYIMNALIHMY-------------------------------SVFGDLGVARE 158
K+ +D + ++ MY ++ G ARE
Sbjct: 291 KLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARE 350
Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
LFD MP+R++VSW +++ G V EA++ M + +++ T+V +L C+
Sbjct: 351 LFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISD 410
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX-XXXXXXXXXXXXWTAMI 277
+ MG++ HG + + + V+ AL+DMY K G ++SA W A++
Sbjct: 411 VQMGKQAHGFIY-RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALL 469
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM-KKRYG 336
+G+A G ++A+ F M+ KP + T+ +L+ C N + + + + Y
Sbjct: 470 TGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYK 528
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC 383
I+ I+ G +VD+ ++ C A + + D +LW ++I C
Sbjct: 529 IDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGC 572
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 160/395 (40%), Gaps = 55/395 (13%)
Query: 31 SKLFTFAALSP-------------SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPT 77
S L TF+ L P G ++ AR L P + +N ++ A + +
Sbjct: 85 SHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSD 144
Query: 78 HHFHALSLFIFMLRRPTH-GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSD 136
F M RR GV A + +F VLK C + R +QLH + K G+ +
Sbjct: 145 EVFR-------MFRRMNRDGVRATET-SFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN 196
Query: 137 CYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE 196
+ +++ +Y + AR +FD + + VSW ++ ++ EA+ +F +MLE
Sbjct: 197 VDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLE 256
Query: 197 AGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIE 256
V + TV SV+ AC+ S AL +G+ +H I K + VST++ DMY K +E
Sbjct: 257 LNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAV-KLSVVADTVVSTSVFDMYVKCDRLE 315
Query: 257 SAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV--------------- 301
SA WT+ +SG A GL +EA +LF M N+
Sbjct: 316 SARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHE 375
Query: 302 ----------------KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
D T+ +L+ C V+ + R+G + +
Sbjct: 376 WDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI-YRHGYDTNVIVAN 434
Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
++D+ + G L+ A + M D V W L+
Sbjct: 435 ALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALL 469
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 2/219 (0%)
Query: 98 PAPDNF-TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
P P ++ + + + C+ L Q +++ + +++N I Y G + A
Sbjct: 56 PEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDA 115
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
RELF+ MP+RD SW ++I + E +F RM GV + + VL++C
Sbjct: 116 RELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLI 175
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
L + R++H V K ++ T+++D+Y K + A W +
Sbjct: 176 LDLRLLRQLHCAVV-KYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVI 234
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
+ G EA+ +F +M NV+P T+++V+ AC
Sbjct: 235 VRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLAC 273
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 219/478 (45%), Gaps = 56/478 (11%)
Query: 37 AALSPSGDLNYARLLLTSNPALN-SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
AA GD++ A + NP LN + +NT++ Y+ + + AL + + M +
Sbjct: 201 AAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNG---YEEEALKMAVSM---EEN 254
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK------------------------- 130
G+ D +F VL + LK + GK++H + K
Sbjct: 255 GLK-WDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKY 313
Query: 131 -------MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
GFG + Y +++I YS G + A+ LFD + ++++V WT++ G ++ +
Sbjct: 314 AESAHLLYGFG-NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQ 372
Query: 184 PVEAIELFGRMLEAGVEVNDATV-VSVLRACADSGALSMGRKVHG------IVKEKKRIE 236
P +EL + D+ V VSVL AC+ + G+++HG I+ +KK +
Sbjct: 373 PDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV- 431
Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
TA +DMY+K G +E A + AMI+G A HG ++ F +M
Sbjct: 432 ------TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM 485
Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
KPDE T A+LSACR+ LV E F M + Y I P H+ C++DL +A
Sbjct: 486 TEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYR 545
Query: 357 LKEAEDFMNAM-PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASN 415
L +A + M + ++ DAV+ + AC +++TE + + ++ L + + YI +N
Sbjct: 546 LDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIAN 605
Query: 416 VYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKL 473
YAS G+W +R M K L G S +D H F D +H E + I+ L
Sbjct: 606 AYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 158/394 (40%), Gaps = 80/394 (20%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
YNT+L ++ + A+ +F M R+ + D+FT ++K A+L G+
Sbjct: 89 YNTLLSGFAKTDGCESE--AIEMFGEMHRKEKDDIWI-DDFTVTTMVKLSAKLTNVFYGE 145
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYS----------VF---------------------- 150
QLHG + K G + +++LIHMYS +F
Sbjct: 146 QLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 151 -GDLGVARELFDRMPD-RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
GD+ A +F R P+ D +SW +LI G + EA+++ M E G++ ++ + +
Sbjct: 206 EGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGA 265
Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX 268
VL + +L +G++VH V + K VS+ ++D+Y K G ++ A
Sbjct: 266 VLNVLSSLKSLKIGKEVHARVLKNGSYSNKF-VSSGIVDVYCKCGNMKYAESAHLLYGFG 324
Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNV--------------------------- 301
++MI G +S G EA LF + N+
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 302 -----KPDERTMTAVLSACRNADLVREAYM----VFSDMKKRYGIEPTIQHFGCVVDLLA 352
PD M +VL AC +AYM R GI + VD+ +
Sbjct: 385 ANETNTPDSLVMVSVLGACS-----LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYS 439
Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
+ G ++ AE ++ + D V++ +I C H
Sbjct: 440 KCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHH 472
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 29/267 (10%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
++HA++LK G+ +N F G++ YA N Y ++M+ Y
Sbjct: 281 EVHARVLKNGSYSN----KFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGY 336
Query: 71 S--------------LSSDPTHHFHALSLFIFMLRRP-----------THGVPAPDNFTF 105
S LS + A+ L LR+P + PD+
Sbjct: 337 SSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVM 396
Query: 106 PFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD 165
VL C+ GK++HG + G D ++ A + MYS G++ A +FD +
Sbjct: 397 VSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFE 456
Query: 166 RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
RD V + ++I G H ++ + F M E G + ++ T +++L AC G + G K
Sbjct: 457 RDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKY 516
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKS 252
+ E I + T +ID+Y K+
Sbjct: 517 FKSMIEAYNISPETGHYTCMIDLYGKA 543
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMP-DRDVVSWTSLIDGLVDHDR-PVEAIELFGR 193
+ Y NA+I Y F ++ ARELF+ +RD++++ +L+ G D EAIE+FG
Sbjct: 53 NVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGE 112
Query: 194 MLEA---GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
M + ++D TV ++++ A + G ++HG++ + K VS+ LI MY+
Sbjct: 113 MHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSS-LIHMYS 171
Query: 251 KSG------------CIESAXXXXXXXXXXX----------------------XXXWTAM 276
K G C+E W +
Sbjct: 172 KCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTL 231
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
I+G A +G +EA+ + + ME +K DE + AVL+ + ++ V + + K
Sbjct: 232 IAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGS 291
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAE 361
G +VD+ + G +K AE
Sbjct: 292 YSNKFVSSG-IVDVYCKCGNMKYAE 315
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 209/415 (50%), Gaps = 21/415 (5%)
Query: 42 SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
SG+L+ AR + P ++ +N ++ +Y+ D + A SLF M + PA
Sbjct: 183 SGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGN---ACSLFSAMPLKS----PASW 235
Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
N + C +KLAR K G +I +I Y+ GD+ A ELF
Sbjct: 236 NILIGGYVNC-REMKLART--YFDAMPQKNGVS---WI--TMISGYTKLGDVQSAEELFR 287
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE--AGVEVNDATVVSVLRACADSGAL 219
M +D + + ++I + +P +A++LF +MLE + ++ ++ T+ SV+ A + G
Sbjct: 288 LMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNT 347
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
S G V + E I+ +ST+LID+Y K G A ++AMI G
Sbjct: 348 SFGTWVESYITEHG-IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMG 406
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
+G+ EA LF M + P+ T T +LSA ++ LV+E Y F+ MK + +EP
Sbjct: 407 CGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEP 465
Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
+ H+G +VD+L RAG L+EA + + +MPM+P+A +W L+ A +H + E E
Sbjct: 466 SADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHC 525
Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALH 454
+++ D +G + +Y+SVG+W + VR+ + +K L K G S +E G+ H
Sbjct: 526 VKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE--GSYH 578
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 168/440 (38%), Gaps = 70/440 (15%)
Query: 4 TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
+ +A Q+HAQ++ + N+ P + F + Y + +L +S+ +
Sbjct: 14 VVLEQAKQVHAQLV-VNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSW 72
Query: 64 NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
++R S + ++I M G+P P + VL+ C +++ GK
Sbjct: 73 GCLVR---FLSQHRKFKETVDVYIDM---HNSGIP-PSSHAVTSVLRACGKMENMVDGKP 125
Query: 124 LHGFITKMGFGSDCYIM-------------------------------NALIHMYSVFGD 152
+H K G Y+ N+L+H Y G+
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 153 LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLR 211
L AR +FD++P++D VSW +I A LF M L++ N ++
Sbjct: 186 LDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWN--ILIGGYV 243
Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX 271
C + + + R + +K + +I Y K G ++SA
Sbjct: 244 NCRE---MKLARTYFDAMPQKNGVSW-----ITMISGYTKLGDVQSAEELFRLMSKKDKL 295
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCN--VKPDERTMTAVLSACRNADLVREAYMVFS 329
+ AMI+ +G K+A+ LF +M N ++PDE T+++V+SA N+ L ++ +
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSA--NSQLGNTSFGTW- 352
Query: 330 DMKKRYGIEPTIQHFGCVVDLLARAGCLK---EAEDFMNAMPM-----KPDAVLWRTLIW 381
+E I G +D L + + DF A M K D V + +I
Sbjct: 353 -------VESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIM 405
Query: 382 ACKVHEDTERAERLMKQHLE 401
C ++ A L +E
Sbjct: 406 GCGINGMATEANSLFTAMIE 425
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 120/297 (40%), Gaps = 23/297 (7%)
Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGS-DCYIMNALIHMYSVFGD--LGVARELFDRM 163
F L+ C L+ Q KQ+H + + + +++ +H F + + +
Sbjct: 8 FFLQRCVVLE---QAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGF 64
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
D SW L+ L H + E ++++ M +G+ + V SVLRAC + G+
Sbjct: 65 NGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGK 124
Query: 224 KVHGIVKEKKRIECKC-NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
+H + K C C V T L+ +Y++ G IE A W +++ G
Sbjct: 125 PIHA--QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLE 182
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
G EA +F ++ + D + ++S+ + A +FS M + I
Sbjct: 183 SGELDEARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNIL 238
Query: 343 HFGCVVDLLARAGC--LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
G V C +K A + +AMP K + V W T+I D + AE L +
Sbjct: 239 IGGYV-------NCREMKLARTYFDAMPQK-NGVSWITMISGYTKLGDVQSAEELFR 287
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 185/402 (46%), Gaps = 17/402 (4%)
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
+D + + +A+E+ G V+ + + + C D+ AL + VH +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 235 IECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFL 294
I + ++I+MY+ G +E A W +I A +G ++AID F
Sbjct: 213 IS-DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271
Query: 295 EMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
+ KPD + AC + E + F M K YGI P ++H+ +V +LA
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS 414
G L EA F+ +M +P+ LW TL+ +VH D +R V+ + L
Sbjct: 332 GYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDM-----VEQLDASRLNK 384
Query: 415 NVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLD 474
A + + V+E + + + K P + + GD + PE +++ L
Sbjct: 385 ESKAGLVPVKSSDLVKEKLQR--MAKGP-------NYGIRYMAAGDISRPENRELYMALK 435
Query: 475 EMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLR 534
+ + + + GY P L ++D E K L +H+E+ A + T S IR++KNLR
Sbjct: 436 SLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLR 495
Query: 535 SCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
C DCH +KL+SKI R++I RD RFHH K+G CSC++YW
Sbjct: 496 VCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
++ + C + ++ K +H FIT SD N++I MYS G + A +F+ MP+R
Sbjct: 186 WIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG-RKV 225
++ +W +I + + +AI+ F R + G + + + AC G ++ G
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG- 284
+ KE I C + +L+ M A+ G ++ A W +++ HG
Sbjct: 306 ESMYKEYGIIPCMEHY-VSLVKMLAEPGYLDEA-LRFVESMEPNVDLWETLMNLSRVHGD 363
Query: 285 --LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVRE 323
L D+ +++ + + + A L +++DLV+E
Sbjct: 364 LILGDRCQDMVEQLDASRLNKESK---AGLVPVKSSDLVKE 401
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 219/457 (47%), Gaps = 38/457 (8%)
Query: 8 EALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALNSYYY 63
E QLH+ ++K G N S +F L S GDL+ + + P + +
Sbjct: 231 EGKQLHSLVVKSGW-------NISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISW 283
Query: 64 NTMLRAYSLSSDPTHHFHALSLFI---FMLRRPTHGVPAPDNFTFPFV--LKCCARLKLA 118
N+++ S+ +D +L LF F +RP+ PF+ L C+R
Sbjct: 284 NSIV---SVCADYGSVLDSLDLFSKMQFWGKRPS---------IRPFMSFLNFCSRNSDI 331
Query: 119 RQGKQLHGFITKMGFG-SDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
+ GKQ+H ++ KMGF S ++ +ALI MY + + L+ +P ++ SL+
Sbjct: 332 QSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTS 391
Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIV-----KEK 232
L+ + IE+FG M++ G +++ T+ +VL+A + LS+ +H K
Sbjct: 392 LMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIK 447
Query: 233 KRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
VS +LID Y KSG E + T++I+G A +G+ + + +
Sbjct: 448 SGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKM 507
Query: 293 FLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
EM+ N+ PDE T+ +VLS C ++ LV E ++F ++ +YGI P + + C+VDLL
Sbjct: 508 LREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLG 567
Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYIL 412
RAG +++AE + D V W +L+ +C++H + R + + + ++ YI
Sbjct: 568 RAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQ 627
Query: 413 ASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
S Y +G + ++RE+ + L++ G S + V
Sbjct: 628 VSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVV 664
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 12/308 (3%)
Query: 8 EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
E +Q+H +++ LG N R+ + + +A L ++ A L N N +L
Sbjct: 130 EGIQVHCRVISLGFGCNMFVRS-ALVGLYACLRL---VDVALKLFDEMLDRNLAVCNLLL 185
Query: 68 RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
R + + + LF LR GV A + T+ ++++ C+ +L +GKQLH
Sbjct: 186 RCFCQTGESKR------LFEVYLRMELEGV-AKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 128 ITKMGFG-SDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
+ K G+ S+ ++ N L+ YS GDL + F+ +P++DV+SW S++ D+ ++
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLD 298
Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
+++LF +M G + +S L C+ + + G+++H V + +V +ALI
Sbjct: 299 SLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALI 358
Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
DMY K IE++ ++++ L G+ K+ I++F M DE
Sbjct: 359 DMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEV 418
Query: 307 TMTAVLSA 314
T++ VL A
Sbjct: 419 TLSTVLKA 426
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
TFP VL C+ R+G Q+H + +GFG + ++ +AL+ +Y+ + VA +LFD M
Sbjct: 114 TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
DR++ L+ E++ RM GV N T ++R C+ + G+
Sbjct: 174 LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGK 233
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
++H +V + V+ L+D Y+ G + + W +++S A +
Sbjct: 234 QLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADY 293
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSAC-RNADL 320
G +++DLF +M+ +P R + L+ C RN+D+
Sbjct: 294 GSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDI 331
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 114/284 (40%), Gaps = 23/284 (8%)
Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
G+L A E FD M RDVV++ LI G + + AIEL+ M+ G+ + +T SVL
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
C+D G +VH V C V +AL+ +YA ++ A
Sbjct: 120 SVCSDELFCREGIQVHCRVISLG-FGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
++ G K +++L ME V + T ++ C + LV E + S
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
+ K I +VD + G L + NA+P K D + W +++ C
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEK-DVISWNSIVSVCA------ 291
Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
D GS + + ++++ + W + +R M+
Sbjct: 292 ---------------DYGSVLDSLDLFSKMQFWGKRPSIRPFMS 320
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 176/358 (49%), Gaps = 3/358 (0%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD +T V+ C+ L+ +GKQ KMGF S+ ++ A I M+S L + +L
Sbjct: 233 PDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKL 292
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
F + D V S+I H +A+ LF + V + T SVL + ++ L
Sbjct: 293 FRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVML 351
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
G VH +V K + V+T+L++MY K+G ++ A W +I G
Sbjct: 352 DHGADVHSLVI-KLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMG 410
Query: 280 LASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
LA + E++ +F ++ ++KPD T+ +L AC A V E +FS M+K +G+
Sbjct: 411 LARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVN 470
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
P +H+ C+++LL R G + EA+D + +P +P + +W ++ A DT AE + K
Sbjct: 471 PGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKT 530
Query: 399 HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
LE S Y++ +Y +W N ++R MN+ L GSS+I ++ ++ F
Sbjct: 531 MLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 122/278 (43%), Gaps = 12/278 (4%)
Query: 38 ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
L +G LN A L P + +NTM+ L S H + + +F M R
Sbjct: 79 GLFKNGYLNNALDLFDEMPERDVVSWNTMISG--LVSCGFHEY-GIRVFFDMQRWEIR-- 133
Query: 98 PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGS-DCYIMNALIHMYSVFGDLGVA 156
P FTF + + + R G+Q+HG G + + N+++ MY G A
Sbjct: 134 --PTEFTFSIL---ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYA 188
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
+F M DRDVVSW LI D A++ F M E ++ ++ TV V+ C+D
Sbjct: 189 LSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDL 248
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
LS G++ + K V A IDM++K ++ + +M
Sbjct: 249 RELSKGKQALALCI-KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSM 307
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
I + H ++A+ LF+ T +V+PD+ T ++VLS+
Sbjct: 308 IGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 9/247 (3%)
Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDAT--VVS 208
G L A +LFD MP+RDVVSW ++I GLV I +F M + + T +++
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX 268
L C G G + V + V +++DMY + G + A
Sbjct: 144 SLVTCVRHGEQIHGNAICSGVSRYNLV-----VWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
W +I + G + A+D F M ++PDE T++ V+S C + + +
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED 388
+ K + +I G +D+ ++ L ++ + K D+VL ++I + H
Sbjct: 259 ALCIKMGFLSNSIV-LGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWHCC 316
Query: 389 TERAERL 395
E A RL
Sbjct: 317 GEDALRL 323
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 3/314 (0%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
D + N ++ Y+ G++ +AR F++ P++ VSW S+I + EA++LF RM
Sbjct: 342 DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMN 401
Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
G + + T+ S+L A L +G ++H IV K + V ALI MY++ G I
Sbjct: 402 IEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV--KTVIPDVPVHNALITMYSRCGEI 459
Query: 256 -ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
ES W AMI G A HG EA++LF M++ + P T +VL+A
Sbjct: 460 MESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
C +A LV EA F M Y IEP ++H+ +V++ + G +EA + +MP +PD
Sbjct: 520 CAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKT 579
Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
+W L+ AC+++ + A + + + S Y+L N+YA +G W ++VR M
Sbjct: 580 VWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNME 639
Query: 435 KKGLIKPPGSSRIE 448
K + K GSS ++
Sbjct: 640 SKRIKKERGSSWVD 653
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 17/257 (6%)
Query: 3 VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
V+ M +A L +++ N DA S + + G++ AR P ++
Sbjct: 325 VSRMEDAFALFSEM-----PNRDA---HSWNMMVSGYASVGNVELARHYFEKTPEKHTVS 376
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+N+++ AY + D + A+ LFI R G PD T +L L R G
Sbjct: 377 WNSIIAAYEKNKD---YKEAVDLFI---RMNIEG-EKPDPHTLTSLLSASTGLVNLRLGM 429
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP-DRDVVSWTSLIDGLVDH 181
Q+H + K D + NALI MYS G++ +R +FD M R+V++W ++I G H
Sbjct: 430 QMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFH 488
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
EA+ LFG M G+ + T VSVL ACA +G + + + +IE +
Sbjct: 489 GNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEH 548
Query: 242 STALIDMYAKSGCIESA 258
++L+++ + G E A
Sbjct: 549 YSSLVNVTSGQGQFEEA 565
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 107/280 (38%), Gaps = 42/280 (15%)
Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
HG + F + N++I Y GD+ AR LFD+M DRD +SW ++IDG V R
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
+A LF M + A S V G
Sbjct: 329 EDAFALFSEM-------------------PNRDAHSWNMMVSG----------------- 352
Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
YA G +E A W ++I+ + KEA+DLF+ M KPD
Sbjct: 353 ----YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
T+T++LSA +R + + K + P + ++ + +R G + E+
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKT--VIPDVPVHNALITMYSRCGEIMESRRIF 466
Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
+ M +K + + W +I H + A L G+
Sbjct: 467 DEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
+GF + +N +I G + AR++F+++ R+ V+W ++I G V +A +L
Sbjct: 38 LGFRATNKELNQMIRS----GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKL 93
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
F M + V V T++S +C L RK+ + + +I YA
Sbjct: 94 FDVMPKRDV-VTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSW-----NTMISGYA 147
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
K+ I A W+AMI+G +G A+ LF +M + P
Sbjct: 148 KNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 200/420 (47%), Gaps = 14/420 (3%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
D++ A + N +N++L + + + AL +F M++ D
Sbjct: 277 DVDSAFRVFDETTCRNIVSWNSILAGFVHNQ---RYDEALEMFHLMVQEAVE----VDEV 329
Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
T +L+ C + K +HG I + G+ S+ +++LI Y+ + A + D M
Sbjct: 330 TVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSM 389
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
+DVVS +++I GL R EAI +F M + N TV+S+L AC+ S L +
Sbjct: 390 TYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NAITVISLLNACSVSADLRTSK 446
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
HGI + +V T+++D YAK G IE A WT +IS A +
Sbjct: 447 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 506
Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
GL +A+ LF EM+ P+ T A LSAC + LV++ M+F M + +P++QH
Sbjct: 507 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQH 565
Query: 344 FGCVVDLLARAGCLKEAEDFMNAMP--MKPDAVLWRTLIWACKVH-EDTERAERLMKQHL 400
+ C+VD+L+RAG + A + + +P +K A W ++ C+ + ++ + L
Sbjct: 566 YSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL 625
Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
E+ S Y+LAS+ +A+ W + A +R L+ ++ + G S + F+ GD
Sbjct: 626 ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 685
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 185/406 (45%), Gaps = 19/406 (4%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
++H +++ G + +N + + D AR L + ++ ++R+Y
Sbjct: 146 KIHGYVIRSGFCGISSVQN-----SILCMYADSDSLSARKLFDEMSERDVISWSVVIRSY 200
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
S +P L LF M+ PD T VLK C ++ G+ +HGF +
Sbjct: 201 VQSKEPVV---GLKLFKEMVHEAK---TEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIR 254
Query: 131 MGFG-SDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
GF +D ++ N+LI MYS D+ A +FD R++VSW S++ G V + R EA+E
Sbjct: 255 RGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALE 314
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
+F M++ VEV++ TVVS+LR C + +HG++ ++ E ++LID Y
Sbjct: 315 MFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII-RRGYESNEVALSSLIDAY 373
Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
++ A + MISGLA G EAI +F M P+ T+
Sbjct: 374 TSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVI 430
Query: 310 AVLSACR-NADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
++L+AC +ADL + +++ I I +VD A+ G ++ A + +
Sbjct: 431 SLLNACSVSADLRTSKWAHGIAIRRSLAIND-ISVGTSIVDAYAKCGAIEMARRTFDQIT 489
Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS 414
K + + W +I A ++ ++A L + + G + LA+
Sbjct: 490 EK-NIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAA 534
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 91/224 (40%), Gaps = 30/224 (13%)
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
GV D F FP V K CA+L QG + F K G DL
Sbjct: 39 GVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCG-------------------DLCS 79
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
FD M RD VSW ++ GL+D+ E + F ++ G E N +T+V V+ AC
Sbjct: 80 GLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC-- 137
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVST---ALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
G K+HG V C +S+ +++ MYA S + SA
Sbjct: 138 RSLWFDGEKIHGYVIRSGF----CGISSVQNSILCMYADSDSL-SARKLFDEMSERDVIS 192
Query: 273 WTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSAC 315
W+ +I + LF EM +PD T+T+VL AC
Sbjct: 193 WSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 205/450 (45%), Gaps = 40/450 (8%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+HA ++K G SK S G L + + S + +N +L +
Sbjct: 105 QVHALMIKQGAETG----TISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGF 160
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+ AL +F M R FT V+K CA LK+ +QGKQ+H +
Sbjct: 161 LRNGKGKE---ALGVFAAMYRERVE----ISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 131 MGFGSDCYIM-NALIHMYSVFGDLGVARELFDRMP-DRDVVSWTSLIDGLVDHDRPVEAI 188
G D ++ A+I YS G + A ++++ + D V SLI G + + EA
Sbjct: 214 TG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF 271
Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH------GIVKEKKRIECKCNVS 242
L R N + S L C+D+ L +G+++H G V + K CN
Sbjct: 272 LLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL----CN-- 320
Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM--ETCN 300
L+DMY K G I A WT+MI A +G +A+++F EM E
Sbjct: 321 -GLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSG 379
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE- 359
V P+ T V+SAC +A LV+E F MK++Y + P +H+ C +D+L++AG +E
Sbjct: 380 VLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEI 439
Query: 360 ---AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL-EMGVDDSGSYILASN 415
E M +W ++ AC ++ D R E + ++ + E G +++ Y+L SN
Sbjct: 440 WRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSN 499
Query: 416 VYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
YA++GKW E+R + KGL+K G S
Sbjct: 500 FYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 171/367 (46%), Gaps = 23/367 (6%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
L+LF+ + R P + TF VL C+ L G+Q+H + K G +
Sbjct: 68 TLALFLQIHRAS----PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKT 123
Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
ALI MYS +G L + +F+ + ++D+VSW +L+ G + + + EA+ +F M VE+
Sbjct: 124 ALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI 183
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXX 260
++ T+ SV++ CA L G++VH +V R + TA+I Y+ G I E+
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVV--LGTAMISFYSSVGLINEAMKV 241
Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR-NAD 319
++ISG + KEA FL M +P+ R +++ L+ C N+D
Sbjct: 242 YNSLNVHTDEVMLNSLISGCIRNRNYKEA---FLLMS--RQRPNVRVLSSSLAGCSDNSD 296
Query: 320 LV--REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
L ++ + V R G + ++D+ + G + +A A+P K V W
Sbjct: 297 LWIGKQIHCV----ALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK-SVVSWT 351
Query: 378 TLIWACKVHEDTERAERLMKQHLEMG---VDDSGSYILASNVYASVGKWSNKAEVRELMN 434
++I A V+ D +A + ++ E G + +S ++++ + A G E +M
Sbjct: 352 SMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMK 411
Query: 435 KKGLIKP 441
+K + P
Sbjct: 412 EKYRLVP 418
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 3/244 (1%)
Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
A LFD +P RD+ S S + + P + + LF ++ A +++ T VL AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
GR+VH ++ K+ E TALIDMY+K G + + W A
Sbjct: 97 LSYPETGRQVHALMI-KQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
++SG +G KEA+ +F M V+ E T+++V+ C + ++++ V + M
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHA-MVVVT 214
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
G + + ++ + G + EA N++ + D V+ +LI C + + + A L
Sbjct: 215 GRDLVVLGTA-MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL 273
Query: 396 MKQH 399
M +
Sbjct: 274 MSRQ 277
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 174/360 (48%), Gaps = 11/360 (3%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
+V + ++HA +LK S N + F GD+ R + + N+
Sbjct: 328 DVKALKLGKEVHAHVLK---SKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAI 384
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
+ ++ Y+ + AL ++M + PD T VL CA L+ +QG
Sbjct: 385 SWTALMSGYAANG---RFDQALRSIVWMQQEGFR----PDVVTIATVLPVCAELRAIKQG 437
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
K++H + K F + ++ +L+ MYS G LFDR+ R+V +WT++ID V++
Sbjct: 438 KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVEN 497
Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
IE+F ML + + T+ VL C+D AL +G+++HG + KK E V
Sbjct: 498 CDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHIL-KKEFESIPFV 556
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
S +I MY K G + SA WTA+I + L ++AI+ F +M +
Sbjct: 557 SARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGF 616
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
P+ T TAVLS C A V EAY F+ M + Y ++P+ +H+ V++LL R G ++EA+
Sbjct: 617 TPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQ 676
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 12/316 (3%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+H I G +N+ R +KL + G + A+ + + + N Y +N +LR
Sbjct: 132 QVHVHIRINGLESNEFLR--TKLVHM--YTACGSVKDAQKVFDESTSSNVYSWNALLRGT 187
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
+S + LS F M GV + ++ V K A RQG + H K
Sbjct: 188 VISGKKRYQ-DVLSTFTEMREL---GVDL-NVYSLSNVFKSFAGASALRQGLKTHALAIK 242
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
G + ++ +L+ MY G +G+AR +FD + +RD+V W ++I GL + R EA+ L
Sbjct: 243 NGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGL 302
Query: 191 FGRML-EAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCNVSTALIDM 248
F M+ E + N + ++L D AL +G++VH ++K K +E + V + LID+
Sbjct: 303 FRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVE-QPFVHSGLIDL 361
Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
Y K G + S WTA++SG A++G +A+ + M+ +PD T+
Sbjct: 362 YCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTI 421
Query: 309 TAVLSACRNADLVREA 324
VL C +++
Sbjct: 422 ATVLPVCAELRAIKQG 437
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 11/303 (3%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
AL++ ++ +R G+P + TF +L+ C R K GKQ+H I G S+ ++
Sbjct: 95 ALTILDYLEQR---GIPV-NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRT 150
Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV--DHDRPVEAIELFGRMLEAGV 199
L+HMY+ G + A+++FD +V SW +L+ G V R + + F M E GV
Sbjct: 151 KLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGV 210
Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
++N ++ +V ++ A + AL G K H + K + + T+L+DMY K G + A
Sbjct: 211 DLNVYSLSNVFKSFAGASALRQGLKTHALAI-KNGLFNSVFLKTSLVDMYFKCGKVGLAR 269
Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNA 318
W AMI+GLA + EA+ LF M + P+ +T +L +
Sbjct: 270 RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDV 329
Query: 319 DLVREAYMVFSD-MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
++ V + +K + +E H G ++DL + G + + +A+ W
Sbjct: 330 KALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKCGDMASGRRVFYGSKQR-NAISWT 387
Query: 378 TLI 380
L+
Sbjct: 388 ALM 390
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 177/393 (45%), Gaps = 21/393 (5%)
Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
EA+E+ + G ++ ++ + + C AL R VH + C A+
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVS-PCDVGARNAI 160
Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
I+MY+ ++ A M+ ++G +EAIDLF + KP+
Sbjct: 161 IEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNG 220
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
V S C V+E + F M + YGI P+++H+ V +LA +G L EA +F+
Sbjct: 221 EIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVE 280
Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERL--MKQHLEMGVDDSGSYILASNVYASVGKW 423
MPM+P +W TL+ +VH D E +R + + L+ D S S G
Sbjct: 281 RMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVS---------SAGLV 331
Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
+ KA +K S+R E F D +HP+ + I+ L + +LK+
Sbjct: 332 ATKA--------SDFVKKEPSTRSE-PYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEM 382
Query: 484 GYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFM 543
GY P I E Q+ + E++A+ L+++ S I ++ N+R DCH+ M
Sbjct: 383 GYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMM 442
Query: 544 KLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
KL+S I RD+I RD +H FKNG C C + W
Sbjct: 443 KLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 193/409 (47%), Gaps = 9/409 (2%)
Query: 38 ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
A S +G + A L S P + +N M+ Y ++LF M R
Sbjct: 150 AYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDK---GINLFNLMQHRGHQ-- 204
Query: 98 PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
P+ +T + L +H F K+ S Y+ AL++MYS + A
Sbjct: 205 --PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
+F+ + + D+V+ +SLI G EA+ LF + +G + + V VL +CA+
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
G++VH V + +E V +ALIDMY+K G ++ A + ++I
Sbjct: 323 DSVSGKEVHSYVI-RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLI 381
Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
GL HG A + F E+ + PDE T +A+L C ++ L+ + +F MK +GI
Sbjct: 382 LGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGI 441
Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
EP +H+ +V L+ AG L+EA +F+ ++ D+ + L+ C+VHE+T AE + +
Sbjct: 442 EPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAE 501
Query: 398 QHLEMGVDDSGSY-ILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
+ G + Y ++ SNVYA G+W +R+ +++ K PG S
Sbjct: 502 NIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 197/444 (44%), Gaps = 21/444 (4%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
++ T +LH+ + K + + P ++L F AL+ DL AR L P + +
Sbjct: 17 KIQTRLNTQKLHSFVTKSKLARD--PYFATQLARFYALND--DLISARKLFDVFPERSVF 72
Query: 62 YYNTMLRAYSLSSDPTHHFHA-LSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+N+++RAY+ H F LSLF +LR T PDNFT+ + + + +
Sbjct: 73 LWNSIIRAYA----KAHQFTTVLSLFSQILRSDTR----PDNFTYACLARGFSESFDTKG 124
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
+ +HG G G D +A++ YS G + A +LF +PD D+ W +I G
Sbjct: 125 LRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGC 184
Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
+ I LF M G + N T+V++ D L + VH K ++
Sbjct: 185 CGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCL-KINLDSHSY 243
Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
V AL++MY++ CI SA +++I+G + G KEA+ LF E+
Sbjct: 244 VGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSG 303
Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
KPD + VL +C V S + R G+E I+ ++D+ ++ G LK A
Sbjct: 304 KKPDCVLVAIVLGSCAELSDSVSGKEVHSYV-IRLGLELDIKVCSALIDMYSKCGLLKCA 362
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV---DDSGSYILASNVY 417
+P K + V + +LI +H A + LEMG+ + + S +L + +
Sbjct: 363 MSLFAGIPEK-NIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCH 421
Query: 418 ASVGKWSNKAEVRELMNKKGLIKP 441
+ G + E+ E M + I+P
Sbjct: 422 S--GLLNKGQEIFERMKSEFGIEP 443
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 185/403 (45%), Gaps = 18/403 (4%)
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
D L + EA+E+ + + G V+ ++ + + C + AL R VH +
Sbjct: 84 FDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI----- 138
Query: 235 IECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFL 294
+I+MY+ + A W MI LA +G + AID+F
Sbjct: 139 TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFT 198
Query: 295 EMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
KPD+ AV AC + + E + F M + YG+ +++ + V+++LA
Sbjct: 199 RFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAAC 258
Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS 414
G L EA DF+ M ++P +W TL+ C V E +R + ++ D+ S
Sbjct: 259 GHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKL---DASRMSKES 315
Query: 415 NVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLD 474
N K S+ A M K ++ R + +HEF GD +H + F L
Sbjct: 316 NAGLVAAKASDSA-----MEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFRSLK 370
Query: 475 -EMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNL 533
+M+D G+ P + +++EEK QLL S KLA A+ +I + + +++N+
Sbjct: 371 VQMLDI----GFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNM 426
Query: 534 RSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
R+C D H K+IS I R +I RD+ ++H +KNG CSCKDYW
Sbjct: 427 RTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 188/406 (46%), Gaps = 20/406 (4%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
Q+H ++K+G N S L F A G+L A + + ++ A
Sbjct: 205 QVHGNMVKVGVGNLIVE---SSLVYFYA--QCGELTSALRAFDMMEEKDVISWTAVISA- 258
Query: 71 SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
S H A+ +FI ML P+ FT +LK C+ K R G+Q+H + K
Sbjct: 259 --CSRKGHGIKAIGMFIGMLNHWF----LPNEFTVCSILKACSEEKALRFGRQVHSLVVK 312
Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
+D ++ +L+ MY+ G++ R++FD M +R+ V+WTS+I EAI L
Sbjct: 313 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 372
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
F M + N+ TVVS+LRAC GAL +G+++H + K IE + + L+ +Y
Sbjct: 373 FRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII-KNSIEKNVYIGSTLVWLYC 431
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
K G A WTAMISG +S G EA+D EM V+P+ T ++
Sbjct: 432 KCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSS 491
Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
L AC N++ + + S KK + + ++ + A+ G + EA ++MP K
Sbjct: 492 ALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFRVFDSMPEK 550
Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMG--VDDSGSYILAS 414
+ V W+ +I + A +LM + G VDD YI A+
Sbjct: 551 -NLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD---YIFAT 592
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 174/363 (47%), Gaps = 10/363 (2%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GDL YAR + S P N+ + M+ Y F ++ HG+ +
Sbjct: 131 GDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYV------KHGIRFTNE 184
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
F +L C+R G+Q+HG + K+G G + + ++L++ Y+ G+L A FD
Sbjct: 185 RMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDM 243
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
M ++DV+SWT++I ++AI +F ML N+ TV S+L+AC++ AL G
Sbjct: 244 MEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFG 303
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
R+VH +V K+ I+ V T+L+DMYAK G I WT++I+ A
Sbjct: 304 RQVHSLVV-KRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
G +EAI LF M+ ++ + T+ ++L AC + + + + + K IE +
Sbjct: 363 EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVY 421
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
+V L + G ++A + + +P + D V W +I C A +K+ ++
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGCSSLGHESEALDFLKEMIQE 480
Query: 403 GVD 405
GV+
Sbjct: 481 GVE 483
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 120/239 (50%), Gaps = 5/239 (2%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
A+SLF M RR H + +N T +L+ C + GK+LH I K + YI +
Sbjct: 369 AISLFRIMKRR--HLIA--NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 424
Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
L+ +Y G+ A + ++P RDVVSWT++I G EA++ M++ GVE
Sbjct: 425 TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
N T S L+ACA+S +L +GR +H I K+ + V +ALI MYAK G + A
Sbjct: 485 NPFTYSSALKACANSESLLIGRSIHSIAKKNHALS-NVFVGSALIHMYAKCGFVSEAFRV 543
Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
W AMI G A +G C+EA+ L ME + D+ +LS C + +L
Sbjct: 544 FDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIEL 602
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 7/263 (2%)
Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
K++H K Y N LI GDL AR++FD MP+++ V+WT++IDG + +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 182 DRPVEAIELFGRMLEAGVE-VNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKC 239
EA LF ++ G+ N+ V +L C+ +GR+VHG +VK
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG---NL 218
Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
V ++L+ YA+ G + SA WTA+IS + G +AI +F+ M
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH 278
Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
P+E T+ ++L AC +R V S + KR I+ + ++D+ A+ G + +
Sbjct: 279 WFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM-IKTDVFVGTSLMDMYAKCGEISD 337
Query: 360 AEDFMNAMPMKPDAVLWRTLIWA 382
+ M + + V W ++I A
Sbjct: 338 CRKVFDGMSNR-NTVTWTSIIAA 359
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 11 QLHAQILKLGTSNNDAPRNFSKLFTFAAL-SPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
+LHAQI+K N +N T L G+ A +L P+ + + M+
Sbjct: 406 ELHAQIIK-----NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMI-- 458
Query: 70 YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
S S H AL M++ GV P+ FT+ LK CA + G+ +H
Sbjct: 459 -SGCSSLGHESEALDFLKEMIQ---EGVE-PNPFTYSSALKACANSESLLIGRSIHSIAK 513
Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
K S+ ++ +ALIHMY+ G + A +FD MP++++VSW ++I G + EA++
Sbjct: 514 KNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALK 573
Query: 190 LFGRMLEAGVEVNDATVVSVLRACAD 215
L RM G EV+D ++L C D
Sbjct: 574 LMYRMEAEGFEVDDYIFATILSTCGD 599
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 160/317 (50%), Gaps = 5/317 (1%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
D N LI + GD A ++ MP+ + SW +++ G V+ ++ EA E F +M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
+GV ++ ++ VL A A + G +H K ++ + V++ALIDMY+K G +
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACA-HKLGLDSRVVVASALIDMYSKCGML 371
Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN-VKPDERTMTAVLSA 314
+ A W MISG A +G EAI LF +++ +KPD T +L+
Sbjct: 372 KHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAV 431
Query: 315 CRNADLVREAYM-VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDA 373
C + ++ E + F M Y I+P+++H ++ + + G + +A+ + D
Sbjct: 432 CSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDG 491
Query: 374 VLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGS--YILASNVYASVGKWSNKAEVRE 431
V WR L+ AC +D + A+ + + +E+G D YI+ SN+YA +W ++R+
Sbjct: 492 VAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRK 551
Query: 432 LMNKKGLIKPPGSSRIE 448
+M + G++K GSS I+
Sbjct: 552 IMRESGVLKEVGSSWID 568
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 4/232 (1%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD +L+ +QLHG++TK GF S+ + N+L+ Y L A ++
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
FD MPD DV+SW SL+ G V R E I LF + + V N+ + + L ACA
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172
Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
+G +H + + + V LIDMY K G ++ A W A+++
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
+ +G + + F +M PD T ++ A + A+ V SDM
Sbjct: 233 CSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 38 ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
A SGD N A +L+ P NS +NT+L Y S F + + GV
Sbjct: 263 AFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATE------FFTKMHSSGV 316
Query: 98 PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
D ++ VL A L + G +H K+G S + +ALI MYS G L A
Sbjct: 317 RF-DEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAE 375
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACA 214
+F MP ++++ W +I G + +EAI+LF ++ E ++ + T +++L C+
Sbjct: 376 LMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 429 VRELMNKKGLIK--PPGSSRIEVDGALHEFVMGDYNH-PEADNIFVKLDEMVDKLKKEGY 485
VR + K ++ P S +V G E G+ + +VKL + +++ GY
Sbjct: 89 VRNTVRKDTTLRHISPSSHSTKVRGDKPEISGGEKKAIVDRSKAYVKLKSLGKEVRDAGY 148
Query: 486 NPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKL 545
P+ VL +ID+E K L+HHSE+LA+A+G+I T G+ IR++KNLR C DCH F+K+
Sbjct: 149 VPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKI 208
Query: 546 ISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
+S I R+IIVRD RFHHF++G+CSC DYW
Sbjct: 209 LSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 150/341 (43%), Gaps = 47/341 (13%)
Query: 44 DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
DL AR P + +N ML Y+ + AL LF MLR P+
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTED---ALRLFNDMLRLGVR----PNET 265
Query: 104 TFPFVLKCCA------------------RLKL--------------ARQGKQLHGFITKM 131
T+ V+ C+ R++L R + ++
Sbjct: 266 TWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL 325
Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
G + NA+I Y+ GD+ AR+LFD MP R+VVSW SLI G + + AIE F
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 192 GRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
M++ G + ++ T++SVL AC L +G + ++ K +I+ + +LI MYA
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIR-KNQIKLNDSGYRSLIFMYA 444
Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
+ G + A + + + A++G E ++L +M+ ++PD T T+
Sbjct: 445 RGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTS 504
Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
VL+AC A L++E +F ++ P H+ C +DLL
Sbjct: 505 VLTACNRAGLLKEGQRIFKSIR-----NPLADHYAC-MDLL 539
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 199/508 (39%), Gaps = 130/508 (25%)
Query: 2 EVTTMSEALQLHAQILKLGTSNNDAPRN---FSKLFTFAAL--SPSGDLNYARLLLTSNP 56
+ T + Q+HAQ++ N PR S++ + +PS Y RL+ S
Sbjct: 15 QALTFPQLNQIHAQLIVF----NSLPRQSYWASRIISCCTRLRAPS---YYTRLIFDSVT 67
Query: 57 ALNSYYYNTMLRAYS---LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCA 113
N + N+M + +S +++D + +R G+ PD F+FP V+K
Sbjct: 68 FPNVFVVNSMFKYFSKMDMANDVLRLYE---------QRSRCGI-MPDAFSFPVVIKSAG 117
Query: 114 RLKLARQGKQLHGFITKMGF----------------------------------GSDCYI 139
R G + K+GF GSD +
Sbjct: 118 RF-----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 140 M----------------------------NALIHMYSVFGDLGVARELFDRMPDRDVVSW 171
M +I ++ DL AR+ FDRMP++ VVSW
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSW 232
Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
+++ G + +A+ LF ML GV N+ T V V+ AC+ S+ R + ++ E
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 232 KKRIECKCNVSTALIDMYAKS--------------------------------GCIESAX 259
KR+ C V TAL+DM+AK G + SA
Sbjct: 293 -KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSAR 351
Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRN- 317
W ++I+G A +G AI+ F +M + + KPDE TM +VLSAC +
Sbjct: 352 QLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM 411
Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
ADL E D ++ I+ + ++ + AR G L EA+ + M + D V +
Sbjct: 412 ADL--ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSYN 468
Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVD 405
TL A + D L+ + + G++
Sbjct: 469 TLFTAFAANGDGVETLNLLSKMKDEGIE 496
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 43 GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
GD++ AR L + P N +N+++ Y+ H+ A F +G PD
Sbjct: 345 GDMSSARQLFDTMPKRNVVSWNSLIAGYA------HNGQAALAIEFFEDMIDYGDSKPDE 398
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
T VL C + G + +I K + +LI MY+ G+L A+ +FD
Sbjct: 399 VTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDE 458
Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
M +RDVVS+ +L + VE + L +M + G+E + T SVL AC +G L G
Sbjct: 459 MKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEG 518
Query: 223 RKVHGIVK 230
+++ ++
Sbjct: 519 QRIFKSIR 526
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 18/288 (6%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD TF +L C+R L + L +T D + N L+ G + +A E+
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 160 FDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
+MP + +VVS++++IDG R EA+ LFG M G+ ++ + ++L
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK 456
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYAKSGCIESAXXXXXXXXXX----X 269
G + I++E + K +V T AL+ Y K G +
Sbjct: 457 VG---RSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVF 328
++ +I G + GL KEA+++F E ++ ++ D +A++ A C+N LV A +
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG-LVGSAVSLI 572
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN--AMPMKPDAV 374
+M K GI P + + ++D R+ + + D+ N ++P A+
Sbjct: 573 DEMTKE-GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSAL 619
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 53/335 (15%)
Query: 61 YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
Y ++ ++ AY S H A+S+F M +G+ P+ T+ V+ C K +
Sbjct: 269 YAFSALISAYGRSG---LHEEAISVFNSM---KEYGL-RPNLVTYNAVIDACG--KGGME 319
Query: 121 GKQLHGFITKM---GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTS 173
KQ+ F +M G D N+L+ + S G AR LFD M +R DV S+ +
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 174 LIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
L+D + + A E+ +M + N + +V+ A +G + G ++
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 234 RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
+ + +T L+ +Y K G E EA+D+
Sbjct: 440 IALDRVSYNT-LLSIYTKVGRSE-------------------------------EALDIL 467
Query: 294 LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLAR 353
EM + +K D T A+L E VF++MK+ + + P + + ++D ++
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSK 526
Query: 354 AGCLKEAEDF---MNAMPMKPDAVLWRTLIWA-CK 384
G KEA + + ++ D VL+ LI A CK
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX----XXXXXWTAMISGLASHG 284
VK ++R + +++A+I + G + A ++A+IS G
Sbjct: 223 VKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSG 282
Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHF 344
L +EAI +F M+ ++P+ T AV+ AC + + F D +R G++P F
Sbjct: 283 LHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITF 342
Query: 345 GCVVDLLARAGCLKEAEDFMNAMP---MKPDAVLWRTLIWA-CK 384
++ + +R G + A + + M ++ D + TL+ A CK
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 172/399 (43%), Gaps = 61/399 (15%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T+ ++ C R + G + K+G+G +N+L++ + + A L D+
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 163 MPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG- 217
M + D V++T+L+ GL H++ EA+ L RM+ G + + T +V+ G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 218 ---ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
AL++ K+ EK +IE + + +ID K ++
Sbjct: 221 PDLALNLLNKM-----EKGKIEADVVIYSTVIDSLCKYRHVD------------------ 257
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
+A++LF EM+ ++PD T ++++S N +A + SDM +R
Sbjct: 258 -------------DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTER 391
I P + F ++D A+ G L EAE + M + P+ V + +LI +H+ +
Sbjct: 305 -KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 392 AERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
A+++ + + D +Y N + K + E+ M+++GL+ + +
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV----GNTVTYT 419
Query: 451 GALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKL 489
+H F + + DN + +MV +G +P +
Sbjct: 420 TLIHGF----FQASDCDNAQMVFKQMV----SDGVHPNI 450
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 163/422 (38%), Gaps = 35/422 (8%)
Query: 34 FTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRP 93
F A L L Y ++T N LN + H + +S + ++ +
Sbjct: 118 FALAILGKMMKLGYGPSIVTLNSLLNGFC----------------HGNRISEAVALVDQM 161
Query: 94 THGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDL 153
PD TF ++ + A + L + G D A+I+ G+
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 154 GVARELFDRMP----DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
+A L ++M + DVV ++++ID L + +A+ LF M G+ + T S+
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX 269
+ + G S ++ + E+K I +LID +AK G + A
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 270 X----XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY 325
+ ++I+G H EA +F M + + PD T +++ A V +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF--MNAMPMKPDAVLWRTLIWAC 383
+F DM +R + T+ + + + C F M + + P+ + + TL+
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 384 KVHEDTERA----ERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
+ E+A E L K +E D +Y + S GK + ++ ++ KG +
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKME---PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG-V 516
Query: 440 KP 441
KP
Sbjct: 517 KP 518
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 112/298 (37%), Gaps = 46/298 (15%)
Query: 78 HHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDC 137
H AL+LF M + PD FT+ ++ C +L + + +
Sbjct: 255 HVDDALNLFTEMDNKGIR----PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 138 YIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGR 193
N+LI ++ G L A +LFD M R ++V++ SLI+G HDR EA ++F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 194 MLEAGVEVNDATVVSVLRACADSGAL--------SMGRK------------VHGIVK--- 230
M+ + T +++ + + M R+ +HG +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 231 -EKKRIECKCNVS----------TALIDMYAKSGCIESAXXXXXXXXXXXXX----XWTA 275
+ ++ K VS L+D K+G +E A +
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
M G+ G ++ DLF + VKPD ++S L EAY +F MK+
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 157/359 (43%), Gaps = 26/359 (7%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D +T ++ C R K + G K+G+ D + L++ + + G + A L
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 161 DRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
DRM + D+V+ ++LI+GL R EA+ L RM+E G + ++ T VL S
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 217 G----ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX----XXXXXXXX 268
G AL + RK+ E++ I+ + +ID K G + A
Sbjct: 224 GNSALALDLFRKM-----EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
++++I GL + G + + EM N+ PD T +A++ + EA ++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE---DFMNAMPMKPDAVLWRTLIWA-CK 384
++M R GI P + ++D + CL EA D M + +PD V + LI + CK
Sbjct: 339 NEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 385 VHEDTERAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPP 442
+ RL ++ G + ++ +Y + GK + E+ + M +G+ PP
Sbjct: 398 AKR-VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV--PP 453
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 15/250 (6%)
Query: 143 LIHMYSVFGDLGVARELFDRMPD----RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG 198
+IH Y+ GD+ + E+FD M V ++ LI+GLV+ + +A+E+ M AG
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVK-EKKRIECKCNVSTALIDMYAKSGCIES 257
V N+ T +++ A G G+ + + + ++ AL+ KSG ++S
Sbjct: 655 VSANEHTYTKIMQGYASVG--DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 258 AXXXXXXXXXXX----XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
A + +I G A G EA DL +M+ VKPD T T+ +S
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 314 ACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA---EDFMNAMPMK 370
AC A + A +M+ G++P I+ + ++ ARA ++A + M AM +K
Sbjct: 773 ACSKAGDMNRATQTIEEMEA-LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 371 PDAVLWRTLI 380
PD ++ L+
Sbjct: 832 PDKAVYHCLL 841
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 143/358 (39%), Gaps = 30/358 (8%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
Y+TM+ Y++ +D L +F +R P T+ ++ ++ +
Sbjct: 452 YHTMMDGYTMVADEKK-----GLVVF--KRLKECGFTPTVVTYGCLINLYTKVGKISKAL 504
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLID-- 176
++ + + G + + +I+ + D A +F+ M DV+ + ++I
Sbjct: 505 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 177 -GLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
G+ + DR ++ ++ ++ T + ++ A SG + +V +++ R
Sbjct: 565 CGMGNMDRAIQTVKEMQKLRH---RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR---RC 618
Query: 236 ECKCNVST------ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEA 289
C V T L++ +E +T ++ G AS G +A
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 290 IDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVD 349
+ F ++ + D T A+L AC + ++ A V +M R I + ++D
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR-NIPRNSFVYNILID 737
Query: 350 LLARAGCLKEAEDFMNAMP---MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
AR G + EA D + M +KPD + + I AC D RA + +++ +GV
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGV 795
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 33/338 (9%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
YN +L + P + +L + + + G+ APD +T+ ++ CC R L ++
Sbjct: 246 YNVILNVFGKMGTPWNKITSL-----VEKMKSDGI-APDAYTYNTLITCCKRGSLHQEAA 299
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP----DRDVVSWTSLI--- 175
Q+ + GF D NAL+ +Y A ++ + M +V++ SLI
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 176 --DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
DG++D EA+EL +M E G + + T ++L +G + I +E +
Sbjct: 360 ARDGMLD-----EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV---ESAMSIFEEMR 411
Query: 234 RIECKCNVST--ALIDMYAKSGCIESAXXXXXXXX----XXXXXXWTAMISGLASHGLCK 287
CK N+ T A I MY G W +++ +G+
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
E +F EM+ P+ T ++SA +A V+ M G+ P + + V
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTV 530
Query: 348 VDLLARAGCLKEAEDFMNAMP---MKPDAVLWRTLIWA 382
+ LAR G +++E + M KP+ + + +L+ A
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 140/339 (41%), Gaps = 28/339 (8%)
Query: 132 GFGSDCYIMNALIHMYSVFGDLGVAREL---FDRM------PDRDVVSWTSLIDGLVDHD 182
G D N L+ +VFG G+ E+ F M P+R+ ++ +LI
Sbjct: 449 GLSPDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCG 503
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
+A+ ++ RML+AGV + +T +VL A A G KV + E + CK N
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV---LAEMEDGRCKPNEL 560
Query: 243 T--ALIDMYAKS---GCIES-AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
T +L+ YA G + S A ++ + L EA F E+
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
+ PD T+ +++S +V +A V MK+R G P++ + ++ + +R+
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER-GFTPSMATYNSLMYMHSRSAD 679
Query: 357 LKEAEDFMN---AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG-VDDSGSYIL 412
++E+ + A +KPD + + T+I+A + A R+ + G V D +Y
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 413 ASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDG 451
YA+ + V M K G + VDG
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 167/402 (41%), Gaps = 36/402 (8%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+++ + ++ R+ + ++ + + G D + LI + GD+ A +
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 160 FDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
F M R DV+++T++I G VEA +LF M G+E + T ++
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNV--STALIDMYAKSGCIESAXXXX----XXXXXXX 269
+G + +VH + + C NV T LID K G ++SA
Sbjct: 434 AGHMKDAFRVHNHMIQAG---CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVF 328
+ ++++GL G +EA+ L E E + D T T ++ A C++ ++ +A +
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-DKAQEIL 549
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLIWACKV 385
+M + G++PTI F +++ G L++ E +N M K P+A + +L+ +
Sbjct: 550 KEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 386 HEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVREL---MNKKGLIKPP 442
+ + A + K GV G N+ K N E L M KG
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGK--TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 443 GSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
+ + + G L F++ E+ D++++EG
Sbjct: 667 STYSVLIKGFLKR------------KKFLEAREVFDQMRREG 696
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 136/318 (42%), Gaps = 30/318 (9%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLE 196
N +IH G + A L M + DV+S++++++G + +L M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 197 AGVEVNDATVVSVL----RAC----ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
G++ N S++ R C A+ M R+ GI+ + V T LID
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ--GILPDTV-------VYTTLIDG 360
Query: 249 YAKSGCIESAXXXXXXXXXXXXX----XWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
+ K G I +A +TA+ISG G EA LF EM ++PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
T T +++ A +++A+ V + M + G P + + ++D L + G L A + +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 365 NAM---PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASV 420
+ M ++P+ + +++ + E A +L+ + G++ D+ +Y + Y
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 421 GKWSNKAEVRELMNKKGL 438
G+ E+ + M KGL
Sbjct: 540 GEMDKAQEILKEMLGKGL 557
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 167/402 (41%), Gaps = 36/402 (8%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+++ + ++ R+ + ++ + + G D + LI + GD+ A +
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 160 FDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
F M R DV+++T++I G VEA +LF M G+E + T ++
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNV--STALIDMYAKSGCIESAXXXX----XXXXXXX 269
+G + +VH + + C NV T LID K G ++SA
Sbjct: 434 AGHMKDAFRVHNHMIQAG---CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVF 328
+ ++++GL G +EA+ L E E + D T T ++ A C++ ++ +A +
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-DKAQEIL 549
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLIWACKV 385
+M + G++PTI F +++ G L++ E +N M K P+A + +L+ +
Sbjct: 550 KEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 386 HEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVREL---MNKKGLIKPP 442
+ + A + K GV G N+ K N E L M KG
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGK--TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 443 GSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
+ + + G L F++ E+ D++++EG
Sbjct: 667 STYSVLIKGFLKR------------KKFLEAREVFDQMRREG 696
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 136/318 (42%), Gaps = 30/318 (9%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLE 196
N +IH G + A L M + DV+S++++++G + +L M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 197 AGVEVNDATVVSVL----RAC----ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
G++ N S++ R C A+ M R+ GI+ + V T LID
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ--GILPDTV-------VYTTLIDG 360
Query: 249 YAKSGCIESAXXXXXXXXXXXXX----XWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
+ K G I +A +TA+ISG G EA LF EM ++PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
T T +++ A +++A+ V + M + G P + + ++D L + G L A + +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 365 NAM---PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASV 420
+ M ++P+ + +++ + E A +L+ + G++ D+ +Y + Y
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 421 GKWSNKAEVRELMNKKGL 438
G+ E+ + M KGL
Sbjct: 540 GEMDKAQEILKEMLGKGL 557
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 168/397 (42%), Gaps = 21/397 (5%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T ++ CC R + G I K+G+ D + LI+ + G + A EL DR
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDR 167
Query: 163 MPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
M + +++ +L++GL + + +A+ L RM+E G + N+ T VL+ SG
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA----XXXXXXXXXXXXXXWT 274
++ ++ ++E+K I+ + +ID K G +++A +T
Sbjct: 228 TALAMELLRKMEERK-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
+I G G + L +M + PD +A++ +REA + +M +R
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLIWA-CKVHEDTE 390
GI P + ++D + L +A ++ M K P+ + LI CK + +
Sbjct: 347 -GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
E K L V D+ +Y + +GK E+ + M + + S +I +D
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 451 GALHEFVMGDYNHPE-ADNIFVKLDEMVDKLKKEGYN 486
G + D PE A IF K+++ +L YN
Sbjct: 466 G------LCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/308 (17%), Positives = 126/308 (40%), Gaps = 42/308 (13%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
PD F ++ C + R+ ++LH + + G D +LI + L A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 159 LFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
+ D M + ++ ++ LI+G + + +ELF +M GV + T ++++
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 215 DSGALSMGRKV-HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
+ G L + +++ +V + R + +
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPD---------------------------------IVSY 460
Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
++ GL +G ++A+++F ++E ++ D ++ NA V +A+ +F +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM---KPDAVLWRTLIWACKVHEDTE 390
+ G++P ++ + ++ L + G L EA+ M P+ + LI A D
Sbjct: 521 K-GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 391 RAERLMKQ 398
++ +L+++
Sbjct: 580 KSAKLIEE 587
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF--GSDCYI 139
A LF+ ML+ G ++ VLK CA ++ GKQ+H K+GF D Y+
Sbjct: 173 AAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYL 232
Query: 140 MNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV 199
+LI Y F L A + ++ + + V+W + + E I F M G+
Sbjct: 233 SGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGI 292
Query: 200 EVNDATVVSVLRACA--DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
+ N + +VL+AC+ G S G++VH K E C + LI+MY K G ++
Sbjct: 293 KKNVSVFSNVLKACSWVSDGGRS-GQQVHANAI-KLGFESDCLIRCRLIEMYGKYGKVKD 350
Query: 258 AXXXXXXXXXXXXXX-WTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
A W AM++ +G+ EAI L +M+ +K
Sbjct: 351 AEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKA 397
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 7/274 (2%)
Query: 113 ARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWT 172
AR R +L I K +N L+ M+ G L + R++FDRMP RD SW
Sbjct: 99 ARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWA 158
Query: 173 SLIDGLVDHDRPVEAIELFGRML----EAGVEVNDATVVSVLRACADSGALSMGRKVHGI 228
+ G ++ +A LF ML + ++ + VL+ACA +G++VH +
Sbjct: 159 IVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHAL 218
Query: 229 VKEKKRI-ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
+ I E +S +LI Y + C+E A W A ++ G +
Sbjct: 219 CHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQ 278
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACR-NADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
E I F+EM +K + + VL AC +D R V ++ K G E
Sbjct: 279 EVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIK-LGFESDCLIRCR 337
Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
++++ + G +K+AE + + W ++
Sbjct: 338 LIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMV 371
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 94 THGVPAPDNFTFPFVLKCCARLK-LARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGD 152
HG+ + F VLK C+ + R G+Q+H K+GF SDC I LI MY +G
Sbjct: 289 NHGIK-KNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGK 347
Query: 153 LGVARELFDRMPDRDVVS-WTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA 204
+ A ++F D VS W +++ + + +EAI+L +M G++ +D
Sbjct: 348 VKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDT 400
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 142/345 (41%), Gaps = 41/345 (11%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T ++ C R + G I K+G+ D I N L++ + + A EL DR
Sbjct: 124 YTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR 183
Query: 163 MPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
M + +++ +L++GL + + +A+ L RM+E G + N+ T VL SG
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
++ ++ ++E+ N+ + ++ +I
Sbjct: 244 TALAMELLRKMEER-------NIKLDAV-------------------------KYSIIID 271
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
GL G A +LF EME K D T ++ NA + + DM KR I
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KIS 330
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLIWACKVHEDTERAERL 395
P + F ++D + G L+EA+ + M + P+ + + +LI E A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 396 MKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
+ + G D D ++ + N Y + + E+ M+ +G+I
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 126/308 (40%), Gaps = 42/308 (13%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
+P+ TF ++ + R+ QL + + G + N+LI + L A +
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 159 LFDRMP----DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
+ D M D D++++ LI+G +R + +ELF M GV N T ++++
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 215 DSGALSMGRKV-HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
SG L + +K+ +V + R + +
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPD---------------------------------IVSY 476
Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
++ GL +G ++A+++F ++E ++ D ++ NA V +A+ +F +
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLIWACKVHEDTE 390
+ G++ + + ++ L R L +A+ M + PD + + LI A +D
Sbjct: 537 K-GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 391 RAERLMKQ 398
A L+++
Sbjct: 596 TAAELIEE 603
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 132/309 (42%), Gaps = 55/309 (17%)
Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
F+ C R +L+ L G + K+G+G +N+L++ + + A L D+M +
Sbjct: 116 FINYFCRRSQLSLALAIL-GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 167 ----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG----A 218
D V++T+L+ GL H++ EA+ L RM+ G + + T +V+ G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
L++ K+ EK +IE + +ID
Sbjct: 235 LNLLNKM-----EKGKIEADVVIYNTIID------------------------------- 258
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
GL + +A DLF +MET +KPD T ++S N +A + SDM ++ I
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NIN 317
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK----PDAVLWRTLIWA-CKVHEDTERAE 393
P + F ++D + G L EAE + M PD V + TLI CK +R E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY----KRVE 373
Query: 394 RLMKQHLEM 402
M+ EM
Sbjct: 374 EGMEVFREM 382
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 104/268 (38%), Gaps = 23/268 (8%)
Query: 81 HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIM 140
H F + T G+ PD FT+ ++ C +L + + D
Sbjct: 265 HMDDAFDLFNKMETKGIK-PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Query: 141 NALIHMYSVFGDLGVARELFDRMPDR-----DVVSWTSLIDGLVDHDRPVEAIELFGRML 195
NALI + G L A +L+D M DVV++ +LI G + R E +E+F M
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 196 EAGVEVNDATVVSVL------RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
+ G+ N T +++ R C D+ + + V + L+D
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDC-DNAQMVFKQMV------SDGVHPDIMTYNILLDGL 436
Query: 250 AKSGCIESAXXXXXXXXXXXX----XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
+G +E+A +T MI L G ++ DLF + VKP+
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKK 333
T T ++S L EA +F +MK+
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKE 524
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 13/288 (4%)
Query: 135 SDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIEL 190
+D I N +I + + A +LF++M + DV ++ LI L ++ R +A L
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
MLE + + +++ A G L K++ + + K LI +
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 251 KSGCIESAXXXXXXXXXX----XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
K +E +T +I G C A +F +M + V PD
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
T +L N V A +VF M+KR ++ I + +++ L +AG +++ D +
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKR-DMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 367 MPM---KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG-VDDSGSY 410
+ + KP+ V + T++ E A+ L + E G + +SG+Y
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 48/308 (15%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D +T+ + C R + + K+G+ D +++L++ Y + A L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 161 DRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
D+M + D ++T+LI GL H++ EA+ L +M++ G + + T +V+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 217 G----ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
G ALS+ +K+ EK +IE + +ID
Sbjct: 237 GDIDLALSLLKKM-----EKGKIEADVVIYNTIID------------------------- 266
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
GL + +A++LF EM+ ++PD T ++++S N +A + SDM
Sbjct: 267 ------GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDT 389
+R I P + F ++D + G L EAE + M + PD + +LI +H+
Sbjct: 321 ER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 390 ERAERLMK 397
+ A+ + +
Sbjct: 380 DEAKHMFE 387
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 170/426 (39%), Gaps = 29/426 (6%)
Query: 7 SEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLT----SNPALNSYY 62
SEA+ L Q+++ G P + L GD++ A LL +
Sbjct: 205 SEAVALVDQMVQRGCQ----PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
YNT++ H AL+LF M + PD FT+ ++ C
Sbjct: 261 YNTIIDGLC---KYKHMDDALNLFTEMDNKGIR----PDVFTYSSLISCLCNYGRWSDAS 313
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGL 178
+L + + + +ALI + G L A +L+D M R D+ +++SLI+G
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
HDR EA +F M+ N T ++++ + + G ++ + ++ +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXX---XXXWTAMISGLASHGLCKEAIDLFLE 295
+T + + C + + ++ GL +G +A+ +F
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
++ ++PD T ++ A V + + +F ++ + G+ P + + ++ R G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKG 552
Query: 356 CLKEAEDFMNAM----PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYI 411
+EA+ + M P+ P++ + TLI A D E + L+K+ G S I
Sbjct: 553 SKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Query: 412 -LASNV 416
L +N+
Sbjct: 612 GLVTNM 617
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 165/400 (41%), Gaps = 63/400 (15%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T+ ++ C R L G + K+G+ +++L++ Y + A L D+
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 163 MPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
M + D +++T+LI GL H++ EA+ L RM++ G + N T V+ G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
+ + + + E +IE + + +ID
Sbjct: 241 IDLAFNLLNKM-EAAKIEANVVIYSTVID------------------------------- 268
Query: 279 GLASHGLCK-----EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
LCK +A++LF EME V+P+ T ++++S N + +A + SDM +
Sbjct: 269 -----SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTE 390
R I P + F ++D + G L EAE + M + PD + +LI +H+ +
Sbjct: 324 R-KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 391 RAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
A+ + + + + +Y N + + E+ M+++GL+ + +
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV----GNTVTY 438
Query: 450 DGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKL 489
+H F + + DN + +MV +G +P +
Sbjct: 439 TTLIHGF----FQARDCDNAQMVFKQMV----SDGVHPNI 470
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 169/416 (40%), Gaps = 58/416 (13%)
Query: 7 SEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPAL----NSYY 62
SEA+ L ++++ G P + L GD++ A LL A N
Sbjct: 207 SEAVALVDRMVQRGCQ----PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
Y+T++ + H AL+LF M + P+ T+ ++ C +
Sbjct: 263 YSTVIDSLC---KYRHEDDALNLFTEMENKGVR----PNVITYSSLISCLCNYERWSDAS 315
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGL 178
+L + + + NALI + G L A +L+D M R D+ +++SLI+G
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
HDR EA +F M+ N T ++ ++G K K+ E
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTL---------------INGFCKAKRIDE-- 418
Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
L ++ G + + +T +I G C A +F +M +
Sbjct: 419 ---GVELFREMSQRGLVGNTVT------------YTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 299 CNVKPDERTMTAVLSA-CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
V P+ T +L C+N L E MV + +R +EPTI + +++ + +AG +
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKL--EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 358 KEAEDFMNAMPM---KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG-VDDSGS 409
++ D ++ + KPD +++ T+I E A+ L ++ E G + DSG+
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 41/345 (11%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T ++ C R + G I K+G+ + + LI+ + G + A EL DR
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 163 MPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
M + D+++ +L++GL + EA+ L +M+E G + N T VL SG
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
++ ++ ++E+ N+ + ++ +I
Sbjct: 244 TALAMELLRKMEER-------NIKLDAV-------------------------KYSIIID 271
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
GL HG A +LF EME + + T ++ NA + + DM KR I
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-IN 330
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERAERL 395
P + F ++D + G L+EAE+ M + PD + + +LI ++A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 396 MKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
+ + G D + ++ + N Y + + E+ M+ +G++
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 148/359 (41%), Gaps = 29/359 (8%)
Query: 59 NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
NS Y T++ + S + L M VP + F +L C ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLM-----GCVPDAETFN-DVILGLCKFDRIN 304
Query: 119 RQGKQLHGFITKMGFGSD----CYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSL 174
K ++ + + GF D Y+MN L + G + A++LF R+P ++V + +L
Sbjct: 305 EAAKMVNRMLIR-GFAPDDITYGYLMNGLCKI----GRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 175 IDGLVDHDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
I G V H R +A + M+ + G+ + T S++ G + + +V ++ K
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 234 RIECKCNV--STALIDMYAKSGCIESAXXXXXXXXX----XXXXXWTAMISGLASHGLCK 287
CK NV T L+D + K G I+ A + +IS
Sbjct: 420 ---CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
EA+++F EM KPD T +++S D ++ A + DM G+ + +
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTL 535
Query: 348 VDLLARAGCLKEAEDFMNAMPMKP---DAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
++ R G +KEA +N M + D + + +LI + ++A L ++ L G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 162/414 (39%), Gaps = 59/414 (14%)
Query: 49 RLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFV 108
R + + P SY N +L L S H A ++F ML R +P P FTF V
Sbjct: 173 RNVYSCEPTFKSY--NVVLEI--LVSGNCHKVAA-NVFYDMLSRK---IP-PTLFTFGVV 223
Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM----- 163
+K + L +TK G + I LIH S + A +L + M
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 164 -PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
PD + ++ +I GL DR EA ++ RML G +D T ++ G +
Sbjct: 284 VPDAE--TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 223 RK----------------VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
+ +HG V + + K L DM G +
Sbjct: 342 KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAK----AVLSDMVTSYGIVPDV-------- 389
Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
+ ++I G GL A+++ +M KP+ + T ++ + EAY
Sbjct: 390 ----CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP---MKPDAVLWRTLIWA- 382
V ++M G++P F C++ + + EA + MP KPD + +LI
Sbjct: 446 VLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 383 CKVHEDTERAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAEVRELMNK 435
C+V E + A L++ + G V ++ +Y N + G+ E R+L+N+
Sbjct: 505 CEVDE-IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK---EARKLVNE 554
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 10/281 (3%)
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
DV +I G P +A++L G G+ AT+VS++ A ADSG +
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX----XWTAMISGLAS 282
+++ I+ + AL+ Y K+G ++ A ++ +I +
Sbjct: 328 EELRQSG-IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVN 386
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
G + A + EME +V+P+ + +L+ R+ ++ + V +MK G++P Q
Sbjct: 387 AGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS-IGVKPDRQ 445
Query: 343 HFGCVVDLLARAGCLKEAE---DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
+ V+D + CL A D M + ++PD V W TLI H AE + +
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 400 LEMG-VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
G + + +Y + N Y +W + + M +G++
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 17/317 (5%)
Query: 89 MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS 148
+L+ G P++F F +L ++ Q+ + +G D N +I +
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 149 VFGDLGVARELFDRM------PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
F L A FDRM PDR V+W +LID H R + A E+F M G
Sbjct: 456 KFNCLDHAMTTFDRMLSEGIEPDR--VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 513
Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG----CIESA 258
T ++ + D +++ G +K + I T L+D+Y KSG IE
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQG-ILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 259 XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
+ A+I+ A GL ++A++ F M + +KP + ++++A
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 632
Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM---KPDAVL 375
EA+ V MK+ G++P + + ++ L R ++ M M KPD
Sbjct: 633 RRDAEAFAVLQYMKEN-GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKA 691
Query: 376 WRTLIWACKVHEDTERA 392
L A + + T RA
Sbjct: 692 RSMLRSALRYMKQTLRA 708
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 13/246 (5%)
Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE---VNDATVVSVLRACADSGALSMGRKV 225
+++ +LI ++ +A+ L +M + G + VN + V+ L ++ + R
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA----MISGLA 281
I E+ ++E + +I +AKSG A TA +IS LA
Sbjct: 258 KEI--ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALA 315
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
G EA LF E+ +KP R A+L +++A + S+M+KR G+ P
Sbjct: 316 DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR-GVSPDE 374
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMP---MKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
+ ++D AG + A + M ++P++ ++ L+ + + ++ +++K+
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 399 HLEMGV 404
+GV
Sbjct: 435 MKSIGV 440
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 145/351 (41%), Gaps = 40/351 (11%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDV----VSWTSLIDGLVDHDRPVEAIELFGRMLE 196
N LIH + G L A L +RM V++ +LI+GLV R +A+ L M E
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 197 AGVEVNDATVVSVLRACADSG----ALSMGRK-----------VHGIVKEKKRIECKCNV 241
G +N ++ G A+S+ RK V+ ++ + E K N
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
+ +++ SGC+ +A +++++ G GLC+EA+ ++ EM+
Sbjct: 416 AKEILNRMIASGCLPNAYT------------YSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
++ + ++ V+EA MV+S M GI+P + ++ L G + A
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT-IGIKPDTVAYSSIIKGLCGIGSMDAAL 522
Query: 362 DFMNAM------PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASN 415
+ M +PD V + L+ + +D RA L+ L+ G D I +
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP--DVITCNT 580
Query: 416 VYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEA 466
++ + SN + ++ +++ R+ + E ++G Y P+
Sbjct: 581 FLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKT 631
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 150/359 (41%), Gaps = 30/359 (8%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T+ ++ C R L G + K+G+ +++L++ Y + A L D+
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 163 MPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG- 217
M + D +++T+LI GL H++ EA+ L RM++ G + N T V+ G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 218 ---ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX----XX 270
AL++ K+ E +IE + +ID K ++ A
Sbjct: 241 TDLALNLLNKM-----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
++++IS L S+G +A L +M + P+ T A++ A EA ++ D
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 331 MKKRYGIEPTIQHFG------CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACK 384
M KR I+P I + C+ D L +A K+ +FM + PD V + TLI
Sbjct: 356 MIKR-SIDPDIFTYNSLVNGFCMHDRLDKA---KQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 385 VHEDTERAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPP 442
+ E L ++ G V D+ +Y G N +V + M G+ PP
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV--PP 468
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 148/364 (40%), Gaps = 46/364 (12%)
Query: 78 HHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDC 137
H AL+LF M T G+ P+ T+ ++ C QL + + +
Sbjct: 275 HVDDALNLFKEM---ETKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 138 YIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGR 193
NALI + G A +L+D M R D+ ++ SL++G HDR +A ++F
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 194 MLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG 253
M+ + T ++++ S KR+E T L + G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKS----------------KRVE----DGTELFREMSHRG 430
Query: 254 CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
+ +T +I GL G C A +F +M + V PD T + +L
Sbjct: 431 LVGDT------------VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 314 ACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM---K 370
N + +A VF M+K I+ I + +++ + +AG + + D ++ + K
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAE- 428
P+ V + T+I + A L+K+ E G + +SG+Y + G + AE
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 429 VREL 432
+RE+
Sbjct: 598 IREM 601
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 150/365 (41%), Gaps = 49/365 (13%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T+ ++ C R L G + K+G+ +++L++ Y + A L D+
Sbjct: 46 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 105
Query: 163 MPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
M + D +++T+LI GL H++ EA+ L RM++ G + N T V+ G
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
+ + + + E +IE + +ID K ++
Sbjct: 166 IDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVD---------------------- 202
Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
+A++LF EMET ++P+ T ++++S + +A + SDM ++ I
Sbjct: 203 ---------DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KIN 252
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERAERL 395
P + F ++D + G EAE + M + PD + +LI +H+ ++A
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA--- 309
Query: 396 MKQHLEMGVD-----DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
KQ E V D +Y + + + E+ M+ +GL+ + +
Sbjct: 310 -KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 451 GALHE 455
G H+
Sbjct: 369 GLFHD 373
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 175/439 (39%), Gaps = 57/439 (12%)
Query: 7 SEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPAL----NSYY 62
SEA+ L ++++ G P + L GD++ A LL A +
Sbjct: 132 SEAVALVDRMVQRGCQ----PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
+NT++ + H AL+LF M T G+ P+ T+ ++ C
Sbjct: 188 FNTIIDSLC---KYRHVDDALNLFKEM---ETKGI-RPNVVTYSSLISCLCSYGRWSDAS 240
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGL 178
QL + + + NALI + G A +L D M R D+ ++ SLI+G
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
HDR +A ++F M+ + T ++++ S KR+E
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS----------------KRVE-- 342
Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
T L + G + +T +I GL G C A +F +M +
Sbjct: 343 --DGTELFREMSHRGLVGDT------------VTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
V PD T + +L N + +A VF M+K I+ I + +++ + +AG +
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVD 447
Query: 359 EAEDFMNAMPM---KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG-VDDSGSYILAS 414
+ D ++ + KP+ V + T+I + A L+K+ E G + DSG+Y
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Query: 415 NVYASVGKWSNKAE-VREL 432
+ G + AE +RE+
Sbjct: 508 RAHLRDGDKAASAELIREM 526
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 144/337 (42%), Gaps = 33/337 (9%)
Query: 113 ARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVV--- 169
AR+K+ KQ G D N LI + G++ A + ++M + V
Sbjct: 408 ARMKIEAMEKQ--------GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 170 -SWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS--VLRACADSGALSMGRKVH 226
++ LI G + R E + F + E VVS L C G+ + ++
Sbjct: 460 ETYNILIGG---YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESA----XXXXXXXXXXXXXXWTAMISGLAS 282
E + + K + LID G IE A + +I GL+
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
G EA DL LE+ +KPD T +++S A V+ ++ +M KR GI+PT++
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM-KRSGIKPTLK 635
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE- 401
+ ++ L + G ++ E M +KPD +++ ++ VH D E+A L KQ +E
Sbjct: 636 TYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 402 -MGVDDS--GSYILASNVYASVGKWSNKAEVRELMNK 435
+G+D + S IL VGK EVR L+++
Sbjct: 695 SIGLDKTTYNSLILGQ---LKVGKL---CEVRSLIDE 725
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 142/333 (42%), Gaps = 28/333 (8%)
Query: 61 YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
+ YN +LR + + A +++ ML+ +P+ +TF ++ +
Sbjct: 163 FTYNVILRV--MMREEVFFMLAFAVYNEMLKCNC----SPNLYTFGILMDGLYKKGRTSD 216
Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLID 176
+++ +T G + LI G AR+LF M D V+ +L+D
Sbjct: 217 AQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLD 276
Query: 177 GLVDHDRPVEAIELFGRMLEA-----GVEVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
G R VEA EL R+ E G+ + + + RA + A + +
Sbjct: 277 GFCKLGRMVEAFELL-RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML----- 330
Query: 232 KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX----WTAMISGLASHGLCK 287
KK I+ + T LI +K+G IE A + A+I L GL +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 288 EAIDLFLEMETCNVKPDERTMTAVL-SACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
E L LEM PD T T ++ S CRN LVREA +F++++K G P++ F
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNG-LVREAEEIFTEIEKS-GCSPSVATFNA 448
Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
++D L ++G LKEA ++ M + A L+ L
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 130/347 (37%), Gaps = 49/347 (14%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFG----DLGVA 156
D FT VL CAR L R+ K+ + G+ NAL+ ++ G L V
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
+E+ + D V++ L+ V EA + M + GV N T +V+ A +
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGC---IESAXXXXXXXXXXXXXXW 273
G K+ +KE + C + L + KS I+ W
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
M++ + G+ K +F EM++C +PD T ++SA +A ++ +M
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM-T 518
Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK----------------------- 370
R G + + +++ LAR G + E+ ++ M K
Sbjct: 519 RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578
Query: 371 ---------------PDAVLWRTLIWA---CKVHEDTERAERLMKQH 399
P +L RTL+ A C+ +ERA L K+H
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 137/377 (36%), Gaps = 15/377 (3%)
Query: 75 DPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFG 134
D H A+ LF +++ G D+ ++ R +L I +
Sbjct: 148 DSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYL 207
Query: 135 SDCYIMNALIHMYSVFGDLGVARELFDRM----PDRDVVSWTSLIDGLVDHDRPVEAI-E 189
D ++H YS G A +LF+RM P +V++ ++D R I
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
+ M G++ ++ T +VL ACA G L ++ +K E AL+ ++
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG-YEPGTVTYNALLQVF 326
Query: 250 AKSGCIESAXXXXXXXXXXX----XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
K+G A + +++ G KEA + M V P+
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF-- 363
T T V+ A A EA +F MK+ G P + V+ LL + E
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 364 -MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVG 421
M + P+ W T++ C + R+ ++ G + D ++ + Y G
Sbjct: 446 DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 422 KWSNKAEVRELMNKKGL 438
+ +++ M + G
Sbjct: 506 SEVDASKMYGEMTRAGF 522
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 145/347 (41%), Gaps = 41/347 (11%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D +T+ + C R + + K+G+ D +++L++ Y + A L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 161 DRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
D+M + D ++T+LI GL H++ EA+ L +M++ G + + T +V+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
G + + + + E RI+ + +ID K +E
Sbjct: 237 GDIDLALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEV------------------- 276
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
A+DLF EMET ++P+ T ++++ N +A + S+M ++
Sbjct: 277 ------------AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-K 323
Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERAE 393
I P + F ++D + G L EAE M + PD + + LI +H + A+
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 394 RLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
++ K + + + +Y N + + + E+ M+++GL+
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 44/319 (13%)
Query: 135 SDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIEL 190
++ I N +I + + VA +LF M + +VV++ SLI+ L ++ R +A L
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH------------------------ 226
MLE + N T +++ A G L K+H
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 227 -GIVKEKKRI-------ECKCNVST--ALIDMYAKSGCIESAXXXXXXXXXX----XXXX 272
+ E K++ +C N+ T LI+ + K +E
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
+T +I G G C A +F +M + V D T + +L + + A ++F ++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
K +E I + +++ + +AG + EA D ++ +KPD V + T+I + A
Sbjct: 496 KS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 393 ERLMKQHLEMG-VDDSGSY 410
+ L ++ E G + +SG+Y
Sbjct: 555 DDLFRKMKEDGTLPNSGTY 573
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 170/439 (38%), Gaps = 60/439 (13%)
Query: 82 ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
AL LF M+ P P F +L A++K L + MG D Y N
Sbjct: 56 ALDLFTHMVESR----PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 142 ALIHMYSVFGDLGVARELFDRMP----DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
L++ + +A +M + D+V++TSLI+G +R EA+ + +M+E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
G++ + +++ + +G + N + +L D G
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHV--------------------NYALSLFDQMENYGIRPD 211
Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
+T++++GL + G ++A L M +KPD T A++ A
Sbjct: 212 V------------VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAV 374
+A ++++M R I P I + +++ GC+ EA M K PD V
Sbjct: 260 EGKFLDAEELYNEM-IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 375 LWRTLI---WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRE 431
+ +LI CK +D + M Q G ++ +Y + VGK + EV
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG--NTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 432 LMNKKGLIKPPGSSRIEV-------DGALHEFVM--GDYNHPEADNIFVKLDEMVDKLKK 482
M +G+ PP V +G + + +M D E D + + L
Sbjct: 377 HMVSRGV--PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 483 EGYNPKLSEVLLEIDDEEK 501
YN KL + L+ +D K
Sbjct: 435 LCYNGKLEKALMVFEDMRK 453
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 150/358 (41%), Gaps = 55/358 (15%)
Query: 51 LLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLK 110
++ S P + +N +L A + + L I + R + + D +++ ++
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIA-------KMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 111 CCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM----PDR 166
C R + G + K+G+ D +++L++ Y + A L D+M
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG----ALSMG 222
+ V++ +LI GL H++ EA+ L RM+ G + + T +V+ G ALS+
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
+K+ EK +IE + T +ID L +
Sbjct: 244 KKM-----EKGKIEADVVIYTTIID-------------------------------ALCN 267
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
+ +A++LF EM+ ++P+ T +++ N +A + SDM +R I P +
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVV 326
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERAERLMK 397
F ++D + G L EAE + M + PD + +LI +H+ + A+ + +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 145/342 (42%), Gaps = 18/342 (5%)
Query: 83 LSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNA 142
+ L + +L++ G D + ++ K L + G + N+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 143 LIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG 198
LI +G A L M +R +VV++++LID V + VEA +L+ M++
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYAKSGCIE 256
++ + T S++ L + + ++ K +C NV T LI + K+ +E
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK---DCFPNVVTYNTLIKGFCKAKRVE 412
Query: 257 SAXXXXXXXXXX----XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVL 312
+ +I GL G C A +F +M + V PD T + +L
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 313 SACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM--- 369
+ +A +VF ++K +EP I + +++ + +AG +++ D ++ +
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG-VDDSGSY 410
KP+ +++ T+I E A+ L ++ E G + +SG+Y
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 128/317 (40%), Gaps = 17/317 (5%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+ TF ++ A + L + G D + +++ GD+ +A L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 160 FDRMP----DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
+M + DVV +T++ID L ++ +A+ LF M G+ N T S++R +
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX----XX 271
G S ++ + E+K I +ALID + K G + A
Sbjct: 303 YGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
++++I+G H EA +F M + + P+ T ++ A V E +F +M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHED 388
+R G+ + ++ L +AG A+ M + PD + + L+ +
Sbjct: 422 SQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 389 TERA----ERLMKQHLE 401
E+A E L K +E
Sbjct: 481 LEKALVVFEYLQKSKME 497
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 23/308 (7%)
Query: 59 NSYYYNTMLRA---YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
N YN+++R Y SD + L M+ R + P+ TF ++ +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASR------LLSDMIERKIN----PNVVTFSALIDAFVKE 338
Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD----VVSW 171
+ ++L+ + K D + ++LI+ + + L A+ +F+ M +D VV++
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
+LI G R E +ELF M + G+ N T ++++ +G M +K+ +
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 232 KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX----XWTAMISGLASHGLCK 287
+ + L+D K G +E A + MI G+ G +
Sbjct: 459 DG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
+ DLF + VKP+ T ++S L EA +F +MK+ G P + +
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYNTL 576
Query: 348 VDLLARAG 355
+ R G
Sbjct: 577 IRARLRDG 584
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 58/294 (19%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T+ ++ C R L G + K+G+ D +N+L++ + + A L D+
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 163 MPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG- 217
M + D V++T+LI GL H++ EA+ L RM++ G + + T +V+ G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 218 ---ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
AL++ K+ E +IE + + +ID
Sbjct: 234 TDLALNLLNKM-----EAAKIEANVVIYSTVID--------------------------- 261
Query: 275 AMISGLASHGLCK-----EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFS 329
LCK +A++LF EME V+P+ T ++++S N +A + S
Sbjct: 262 ---------SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 330 DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLI 380
DM +R I P + F ++D + G L +AE M + P+ + +LI
Sbjct: 313 DMIER-KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 152/371 (40%), Gaps = 50/371 (13%)
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
G+P +++T+ ++ C R + G + K+G+ + +++L++ Y +
Sbjct: 111 GIPH-NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 156 ARELFDRM----PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
A L D+M + V++ +LI GL H++ EA+ L RM+ G + + T V+
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX 271
G + + +++ K + G +
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGK----------------LEPGVL---------------- 257
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
+ +I GL + +A++LF EMET ++P+ T ++++S N +A + SDM
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHED 388
+R I P + F ++D + G L EAE + M + P V + +LI +H+
Sbjct: 318 IER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 389 TERAERLMKQHLEMGVD-----DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPG 443
+ A KQ E V D +Y + + EV M+++GL+
Sbjct: 377 LDEA----KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 444 SSRIEVDGALH 454
+ I + G
Sbjct: 433 TYNILIQGLFQ 443
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
++ +R + DV ++++LID V + VEA +L+ M++ ++ + T S++
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 218 ALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYAKSGCIESAXXXXXXXXXX----XXX 271
L +++ + K C +V T LI + K +E
Sbjct: 376 RLDEAKQMFEFMVSK---HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVFSD 330
+ +I GL G C A ++F EM + V P+ T +L C+N L E MV +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL--EKAMVVFE 490
Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM---KPDAVLWRTLIWACKVHE 387
+R +EPTI + +++ + +AG +++ D + + KPD V + T+I
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 388 DTERAERLMKQHLEMG-VDDSGSY 410
E A+ L K+ E G + +SG Y
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCY 574
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 19/263 (7%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD FTF ++ + + ++L+ + K ++LI+ + + L A+++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 160 FDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
F+ M + DVV++ +LI G + R E +E+F M + G+ N T +++
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYAKSGCIESAXXX----XXXXXXXX 269
+G M ++ I KE N+ T L+D K+G +E A
Sbjct: 444 AGDCDMAQE---IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVF 328
+ MI G+ G ++ DLF + VKPD ++S CR EA +F
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS-KEEADALF 559
Query: 329 SDMKKRYGIEPTIQHFGCVVDLL 351
+MK+ + T+ + GC L+
Sbjct: 560 KEMKE----DGTLPNSGCYNTLI 578
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 140/342 (40%), Gaps = 27/342 (7%)
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-----DVVSWTSLIDGLVDHD 182
I K+GF D +I +L+ + +L A ++FD M + VS++ LI GL +
Sbjct: 221 ILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVG 280
Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
R EA L +M E G + + T +++A D G + K + E CK NV
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID---KAFNLFDEMIPRGCKPNVH 337
Query: 243 T--ALIDMYAKSGCIESAXXXXXXXXXX----XXXXWTAMISGLASHGLCKEAIDLFLEM 296
T LID + G IE A + A+I+G G A +L M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 297 ETCNVKPDERTMTAVLSA-CRNADLVREAYMVFSDMKKRY--GIEPTIQHFGCVVDLLAR 353
E KP+ RT ++ CR V + Y +K+ G+ P I + ++D L R
Sbjct: 398 EKRACKPNVRTFNELMEGLCR----VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 354 AGCLKEAEDF---MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV--DDSG 408
G + A MN ++PD + + +I A + A + L G+ D+
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513
Query: 409 SYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
L V VGK + + E + K ++ P S + +D
Sbjct: 514 GTTLIDGV-CKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 125/309 (40%), Gaps = 14/309 (4%)
Query: 141 NALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLE 196
NALI+ Y G + A EL M R +V ++ L++GL +P +A+ L RML+
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 197 AGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIE 256
G+ + + ++ G ++ K+ + IE C TA+I+ + K G +
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD-IEPDCLTFTAIINAFCKQGKAD 493
Query: 257 SAXX----XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVL 312
A T +I G+ G ++A+ + + + ++ +L
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 313 SACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK-- 370
V+E + + K G+ P++ + +VD L R+G + + + M +
Sbjct: 554 DMLSKGCKVKEELAMLGKINK-LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 371 -PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWSNKAE 428
P+ + +I E AE+L+ + GV + +Y + Y + GK E
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 429 VRELMNKKG 437
M ++G
Sbjct: 673 TVRAMVERG 681
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 61 YYYNTMLRAYS---LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKL 117
+ YN M+ Y L+++ F L L F PD T+ +L AR +
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFF----------PDAVTYNSLLYAFARERN 382
Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP-----DRDVVSWT 172
+ K+++ + KMGFG D N +IHMY G L +A +L+ M + D +++T
Sbjct: 383 TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT 442
Query: 173 SLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
LID L +R VEA L ML+ G++ T +++ A +G
Sbjct: 443 VLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 127/322 (39%), Gaps = 51/322 (15%)
Query: 134 GSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHD--RPVEA 187
G + NA++ +YS G A+EL D M R D++S+ +LI+ + P A
Sbjct: 222 GDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLA 281
Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
+EL + +G+ + T ++L AC+ L KV ++ + C+ ++ T
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR---CQPDLWT---- 334
Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
+ AMIS GL EA LF+E+E PD T
Sbjct: 335 -------------------------YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVT 369
Query: 308 MTAVLSAC---RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA---- 360
++L A RN + V+E Y M G + ++ + + G L A
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKM----GFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS-GSYILASNVYAS 419
+D PDA+ + LI + T A LM + L++G+ + +Y YA
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 420 VGKWSNKAEVRELMNKKGLIKP 441
GK + M + G KP
Sbjct: 486 AGKREEAEDTFSCMLRSG-TKP 506
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/312 (17%), Positives = 134/312 (42%), Gaps = 15/312 (4%)
Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM---- 163
+++ + KL ++ + + G + + G D N+L+ Y+ G AR +F+ M
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
P V S L+ L R E + + + G +++ ++++ +L A A +G + +
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX----XXXXWTAMISG 279
K++ +K + + +I++ K + A W +M+
Sbjct: 878 KIYSSMKAAGYLPT-IRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM 936
Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTM-TAVLSACRNADLVREAYMVFSDMKKRYGIE 338
+ K+ + ++ ++ ++PDE T T ++ CR+ E Y++ M+ G++
Sbjct: 937 YTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR-PEEGYLLMQQMRN-LGLD 994
Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERAERL 395
P + + ++ + CL++AE + +K D + T++ + +AE+L
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 396 MKQHLEMGVDDS 407
++ G++ +
Sbjct: 1055 LQMMKNAGIEPT 1066
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 94/240 (39%), Gaps = 8/240 (3%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD T+ +L C+R ++ + D + NA+I +Y G A L
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 160 FDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
F + + D V++ SL+ + E++ +M + G ++ T +++
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG-CIESAXXXXXXX---XXXXXX 271
G L + +++ +K T LID K+ +E+A
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQ 474
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
++A+I G A G +EA D F M KPD + +L + R+A+ ++ DM
Sbjct: 475 TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 134/320 (41%), Gaps = 23/320 (7%)
Query: 104 TFPFVLKCCARL-KLARQGK--QLHGFITKM---GFGSDCYIMNALIHMYSVFGDLGVAR 157
FP C L + A+ GK + F M G + N +I GD+ AR
Sbjct: 223 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 158 ELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
LF+ M R D V++ S+IDG R + + F M + E + T +++
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVS--TALIDMYAKSGCIESAXXXXXXXXXX--- 268
G L +G + + +E K K NV + L+D + K G ++ A
Sbjct: 343 CKFGKLPIGLEFY---REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 269 -XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
+T++I G +A L EM V+ + T TA++ +A+ ++EA +
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP---MKPDAVLWRTLIWACK 384
F M G+ P + + ++ +A + A + +N + +KPD +L+ T IW
Sbjct: 460 FGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 385 VHEDTERAERLMKQHLEMGV 404
E E A+ +M + E G+
Sbjct: 519 SLEKIEAAKVVMNEMKECGI 538
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 145/351 (41%), Gaps = 47/351 (13%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
P+ ++ ++ + + +Q + + + ++G + Y +LI G+L A L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 160 FDRM----PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN----DATVVSVLR 211
+ M + +VV++T+LIDGL D +R EA ELFG+M AGV N +A + ++
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 212 ACADSGALSMGRKVHG----------------------------IVKEKKRIECKCN--V 241
A AL + ++ G ++ E K K N +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 242 STALIDMYAKSG----CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
T L+D Y KSG + + +I GL + L +A+D F +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 298 T-CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
++ + TA++ + V A +F M ++ G+ P + ++D + G
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK-GLVPDRTAYTSLMDGNFKQGN 663
Query: 357 LKEA---EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
+ EA D M + MK D + + +L+W ++A +++ + G+
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 127/309 (41%), Gaps = 24/309 (7%)
Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSL 174
++ ++L G + G + NALIH + ++ A EL + + R D++ + +
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
I GL ++ A + M E G++ N +++ A SG + G +H ++ E K
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG--LH-LLDEMKE 570
Query: 235 IECKCNVST--ALIDMYAKSGCIESAXXXXXXXX-----XXXXXXWTAMISGLASHGLCK 287
++ + V T LID K+ + A +TAMI GL +
Sbjct: 571 LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
A LF +M + PD T+++ V EA + D G++ + + +
Sbjct: 631 AATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA-LALRDKMAEIGMKLDLLAYTSL 689
Query: 348 VDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLI-----WACKVHEDTERAERLMKQH 399
V L+ L++A F+ M + PD VL +++ C + E E LMK
Sbjct: 690 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC-IDEAVELQSYLMKHQ 748
Query: 400 LEMGVDDSG 408
L +D+
Sbjct: 749 LLTSDNDNA 757
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 145/343 (42%), Gaps = 35/343 (10%)
Query: 122 KQLHGFITKM---GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSL 174
+++ F+ KM GF D N L+ Y G L A L+ M R D+V++TSL
Sbjct: 253 REVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL 312
Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV------HGI 228
I GL R EA + F RM++ G++ + + +++ A G + +K+ + +
Sbjct: 313 IKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV 372
Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX----XXWTAMISGLASHG 284
V + R CK +++ + + G + SA +I L G
Sbjct: 373 VPD--RFTCK-----VIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEG 425
Query: 285 ---LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
K +D +E E KP+ T ++ + D + EA ++ +K + +
Sbjct: 426 KPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDA- 482
Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
+ + ++ L R G +EAE M M +KPD+ + L++ D ++AERL+
Sbjct: 483 KTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSL 542
Query: 399 H-LEMGVDDSGSYILASNVYASVGKWSNKA-EVRELMNKKGLI 439
+E + D SY G KA E++E M + G +
Sbjct: 543 FAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFV 585
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 105/273 (38%), Gaps = 28/273 (10%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
YNT++ +Y F+ L+ M RR PD T+ ++K + R+
Sbjct: 274 YNTLVSSYCRRGRLKEAFY---LYKIMYRRRV----VPDLVTYTSLIKGLCKDGRVREAH 326
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM------PDRDVVSWTSLID 176
Q + G DC N LI+ Y G + +++L M PDR + +++
Sbjct: 327 QTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDR--FTCKVIVE 384
Query: 177 GLVDHDRPVEA----IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEK 232
G V R + A +EL ++ EV D +VS+ C + + + I++E+
Sbjct: 385 GFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSL---CQEGKPFAAKHLLDRIIEEE 441
Query: 233 KRIECKCNVSTALIDMYAKSGCIESAXX----XXXXXXXXXXXXWTAMISGLASHGLCKE 288
E K LI+ ++ IE A + A+I L G +E
Sbjct: 442 GH-EAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNRE 500
Query: 289 AIDLFLEMETCNVKPDERTMTA-VLSACRNADL 320
A L EM VKPD A V C+ D
Sbjct: 501 AESLMAEMFDSEVKPDSFICGALVYGYCKELDF 533
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 146/368 (39%), Gaps = 32/368 (8%)
Query: 50 LLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVL 109
L+L PA N + T++ + + F LF M +R PD + ++
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAF---DLFKVMEQRGIE----PDLIAYSTLI 328
Query: 110 KCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM----PD 165
+ + G +L G D + ++ I +Y GDL A ++ RM
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 166 RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
+VV++T LI GL R EA ++G++L+ G+E + T S++ G L G +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX----XXXWTAMISGLA 281
+ + K + L+D +K G + A + ++I G
Sbjct: 449 YEDMI-KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY---------MVFSDMK 332
EA+ +F M +KPD T T V+ ++ +A+ + D+
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVM----RVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDT 389
+R I I V+ LL + +++A F N + M+PD V + T+I
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 390 ERAERLMK 397
+ AER+ +
Sbjct: 624 DEAERIFE 631
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 27/322 (8%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA--- 156
P+ T+ +++C + + +L + G + NAL+ G G A
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 157 -RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
R++ R + +V+++T+LID V + +EA EL+ M++ V + T S++
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 216 SGALSMGRKVHGIVKEKKRIECKCN--VSTALIDMYAKSGCIESAXX----XXXXXXXXX 269
G L R++ ++ +R C N + T LI + KS +E
Sbjct: 306 YGLLDEARQMFYLM---ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVF 328
+T +I G G A ++F +M + PD RT +L C N V +A M+F
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK-VEKALMIF 421
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWA-CK 384
M+KR ++ I + ++ + + G +++A D ++ MKP+ + + T+I C+
Sbjct: 422 EYMRKR-EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 385 ---VHEDTERAERLMKQHLEMG 403
+HE A+ L K+ E G
Sbjct: 481 RGLIHE----ADSLFKKMKEDG 498
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 174/413 (42%), Gaps = 39/413 (9%)
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
G+P P T V+ C + G + K+GF D +L++ Y + +
Sbjct: 113 GIP-PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIED 171
Query: 156 ARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
A LFD++ +VV++T+LI L + A+ELF +M G N T +++
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV- 230
Query: 212 ACADSGALSMGR--KVHGIVKE--KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
+G +GR ++++ K+RIE TALID + K G + A
Sbjct: 231 ----TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 268 XXXX----XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVRE 323
+ ++I+GL +GL EA +F ME P+E T ++ + V +
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 324 AYMVFSDMKKRYGIEPTIQHFGCVVD--LLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
+F +M ++ + TI + + L+ R +E + M++ PD + L+
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 382 ACKVHEDTERA----ERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
+ E+A E + K+ +++ + +Y + +GK + ++ + KG
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIV---TYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 438 LIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLS 490
+ KP + I + F H EAD++F K+K++G+ P S
Sbjct: 464 M-KP---NVITYTTMISGFCRRGLIH-EADSLF-------KKMKEDGFLPNES 504
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 133/321 (41%), Gaps = 20/321 (6%)
Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELF 191
+ + N LI + G++ VA LFD+M + +VV++ +LIDG + + +L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST--ALIDMY 249
M G+E N + V+ G + ++V ++ E R + T LI Y
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRM---KEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 250 AKSGCIESAXXXXXXX----XXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
K G A +T++I + G A++ +M + P+E
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
RT T ++ + EAY V +M G P++ + +++ G +++A +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 366 AMPMK---PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVG 421
M K PD V + T++ D + A R+ ++ +E G+ D+ +Y +
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 422 KWSNKAEVRELMNKKGLIKPP 442
+ ++ E M + GL PP
Sbjct: 500 RTKEACDLYEEMLRVGL--PP 518
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 172/404 (42%), Gaps = 28/404 (6%)
Query: 46 NYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTF 105
N + +L S + N + YN ++R + + + AL+LF M T G P+ T+
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV---ALTLFDKM---ETKGC-LPNVVTY 243
Query: 106 PFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG----VARELFD 161
++ +L+ G +L + G + N +I+ G + V E+
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
R D V++ +LI G +A+ + ML G+ + T S++ + +G +M
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG--NM 361
Query: 222 GRKVHGIVKEKKRIECKCNVS-TALIDMYAKSGCIESAXXXXXXXX----XXXXXXWTAM 276
R + + + + R C + T L+D +++ G + A + A+
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVFSDMKKRY 335
I+G G ++AI + +M+ + PD + + VLS CR+ D V EA V +M ++
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD-VDEALRVKREMVEK- 479
Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERA 392
GI+P + ++ KEA D M + PD + LI A + D E+A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 393 ERLMKQHLEMGV-DDSGSYILASNVYASVGKWSNKAEVRELMNK 435
+L + +E GV D +Y + N + K S E + L+ K
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLIN---GLNKQSRTREAKRLLLK 580
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 15/295 (5%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D T+ ++K + Q +H + + G +LIH G++ A E
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 161 DRMPDRDVV----SWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
D+M R + ++T+L+DG EA + M + G + T +++ +
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX----XXX 272
G + V +KEK + ST L + +S ++ A
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVL-SGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVFSDM 331
++++I G KEA DL+ EM + PDE T TA+++A C DL +A + ++M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL-EKALQLHNEM 546
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLIWAC 383
++ G+ P + + +++ L + +EA+ + + + P V + TLI C
Sbjct: 547 VEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 14/280 (5%)
Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
DVV++T+L++GL R ++A+ L RM+E G + + + + AL++ K+
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKM- 67
Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX----XXXWTAMISGLAS 282
E+ I+ + A+ID K G A ++ MI
Sbjct: 68 ----EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
G +A L +M + PD T +A+++A V EA ++ DM +R GI PT
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR-GIFPTTI 182
Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLIWA-CKVHEDTERAERLMKQ 398
+ ++D + L +A+ +++M K PD V + TLI CK E +
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 399 HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
H V ++ +Y + + VG ++ +M G+
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
R++ +R + DVV++++LI+ LV + EA E++G ML G+ T S++
Sbjct: 135 RDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQ 194
Query: 217 GALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYAKSGCIESAX----XXXXXXXXXXX 270
L+ +++ + K C +V T LI+ Y K+ +++
Sbjct: 195 DRLNDAKRMLDSMASKS---CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 251
Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
+T +I G G A DL M + V P+ T ++L++ + +R+A+ + D
Sbjct: 252 VTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILED 311
Query: 331 MKKRYG 336
++K G
Sbjct: 312 LQKSEG 317
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 158/389 (40%), Gaps = 61/389 (15%)
Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
+T+ ++ C R + + K+G+ D +N+L++ + + A L +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 163 MPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG- 217
M + D ++ +LI GL H+R EA+ L RM+ G + + T V+ G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 218 ---ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
ALS+ +K+ E+ +IE + +ID
Sbjct: 237 IDLALSLLKKM-----EQGKIEPGVVIYNTIID--------------------------- 264
Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
L ++ +A++LF EM+ ++P+ T +++ N +A + SDM +R
Sbjct: 265 ----ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTER 391
I P + F ++D + G L EAE + M + PD + +LI +H+ +
Sbjct: 321 -KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 392 AERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVREL---MNKKGLIKPPGSSRIE 448
A+ + + L + D + + + + K E EL M+++GL+ + +
Sbjct: 380 AKHMFE--LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV----GNTVT 433
Query: 449 VDGALHEFVMGDYNHPEADNIFVKLDEMV 477
+H F + E DN + +MV
Sbjct: 434 YTTLIHGF----FQARECDNAQIVFKQMV 458
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 152/365 (41%), Gaps = 19/365 (5%)
Query: 83 LSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNA 142
+ L + +L++ G P + ++ K L + G + N+
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 143 LIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG 198
LI +G A L M +R +VV++++LID V + VEA +L+ M++
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYAKSGCIE 256
++ + T S++ L + + ++ K +C NV T LI + K+ ++
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK---DCFPNVVTYNTLIKGFCKAKRVD 413
Query: 257 SAXXXXXXXXXX----XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVL 312
+T +I G C A +F +M + V PD T + +L
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 313 SACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM--- 369
N V A +VF ++ R +EP I + +++ + +AG +++ D ++ +
Sbjct: 474 DGLCNNGKVETALVVFEYLQ-RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAE 428
KP+ V + T++ E A+ L ++ E G + DSG+Y + G + AE
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
Query: 429 -VREL 432
+RE+
Sbjct: 593 LIREM 597
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 120/292 (41%), Gaps = 34/292 (11%)
Query: 59 NSYYYNTMLRA---YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
N YN+++R Y SD + L M+ R + P+ TF ++ +
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASR------LLSDMIERKIN----PNVVTFSALIDAFVKE 339
Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD----VVSW 171
+ ++L+ + K D + ++LI+ + + L A+ +F+ M +D VV++
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL------RACADSGALSMGRKV 225
+LI G R E +ELF M + G+ N T +++ R C ++ +
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX----XWTAMISGLA 281
G++ + + L+D +G +E+A + MI G+
Sbjct: 460 DGVLPD-------IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
G ++ DLF + VKP+ T T ++S L EA +F +MK+
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 150/354 (42%), Gaps = 20/354 (5%)
Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
D +++ V+ C R + G + K G+ D +++LI+ + + A +L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 161 DRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
+M + DVV + ++IDG +A+ELF RM GV + T S++ S
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 217 GALS-MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX----XXX 271
G S R + +V + I TA+ID++ K G A
Sbjct: 223 GRWSDAARLMRDMV--MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
+ ++I+GL HG EA + M T PD T +++ + V E +F +M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
+R + TI + ++ +AG A++ + M +P+ + L++ ++ E+
Sbjct: 341 AQRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 392 A----ERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
A E + K +E+ D +Y + + +G + ++ ++ KGL KP
Sbjct: 400 ALVLFENMQKSEIEL---DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL-KP 449
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 137/319 (42%), Gaps = 22/319 (6%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD + ++ ++ L +L + + G +D N+L+ G A L
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 160 FDRMPDRD----VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
M RD V+++T++ID V + EA++L+ M V+ + T S++
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYAKSGCIESAXXXXXXXXXXX---- 269
G + +++ ++ K C +V T LI+ + KS ++
Sbjct: 292 HGRVDEAKQMLDLMVTKG---CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVF 328
+ +I G G A ++F M++ +P+ RT + +L C N V +A ++F
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWR-VEKALVLF 404
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP---MKPDAVLWRTLIWACKV 385
+M+K IE I + V+ + + G +++A D ++ +KPD V + T+I
Sbjct: 405 ENMQKS-EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Query: 386 HEDTERAERLMKQHLEMGV 404
++++ L ++ E G+
Sbjct: 464 KRQWDKSDLLYRKMQEDGL 482
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 99/229 (43%), Gaps = 17/229 (7%)
Query: 99 APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
P+ TF V+ + + +L+ +T+ D + N+LI+ + G + A++
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 159 LFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
+ D M + DVV++ +LI+G R E +LF M + G+ + T ++++
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA--KSGCIESAXXXXXXXXXXXX-- 270
+G +++ R++ + N+ T I +Y + +E A
Sbjct: 361 QAGRPDAAQEIFS------RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 271 --XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CR 316
+ +I G+ G ++A DLF + +KPD + T ++S CR
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 179/460 (38%), Gaps = 70/460 (15%)
Query: 6 MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTS----NPALNSY 61
+++AL+L+ ++ T AP ++ + L +G + A L N N
Sbjct: 488 INKALRLYHEM----TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 62 YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTF-PFVLKCCARLKLARQ 120
YN M+ Y D + F L+ T PD +++ P + C L Q
Sbjct: 544 TYNVMIEGYCEEGDMSKAFE-------FLKEMTEKGIVPDTYSYRPLIHGLC----LTGQ 592
Query: 121 GKQLHGFITKMGFGS-----DCYIMNALIHMYSVFGDL----GVARELFDRMPDRDVVSW 171
+ F+ + G+ CY L+H + G L V +E+ R D D+V +
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICY--TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
LIDG + H L M + G++ +D S++ A + +G ++ GI
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF---KEAFGI--- 704
Query: 232 KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAID 291
D+ GC+ + +TA+I+GL G EA
Sbjct: 705 --------------WDLMINEGCVPNEVT------------YTAVINGLCKAGFVNEAEV 738
Query: 292 LFLEMETCNVKPDERTMTAVLSACRNADL-VREAYMVFSDMKKRYGIEPTIQHFGCVVDL 350
L +M+ + P++ T L ++ +++A + + + K G+ + ++
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK--GLLANTATYNMLIRG 796
Query: 351 LARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV-DD 406
R G ++EA + + M + PD + + T+I D ++A L E G+ D
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 407 SGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
+Y + G+ E+R M ++GLI +SR
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 119/275 (43%), Gaps = 28/275 (10%)
Query: 155 VARELFDRM------PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
+ E+ D M P VS SL++GL + EA+ L R+++ GV N +
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVS--SLVEGLRKRGKIEEALNLVKRVVDFGVSPN----LF 368
Query: 209 VLRACADSGALSMGRKVHG---IVKEKKRIECKCNVST--ALIDMYAKSGCIESAXX--- 260
V A DS L GRK H + +I + N T LIDM+ + G +++A
Sbjct: 369 VYNALIDS--LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 261 -XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
+ ++I+G G A EM ++P T T+++ +
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP---MKPDAVLW 376
+ +A ++ +M + GI P+I F ++ L RAG +++A N M +KP+ V +
Sbjct: 487 KINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 377 RTLIWACKVHEDTERAERLMKQHLEMG-VDDSGSY 410
+I D +A +K+ E G V D+ SY
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 16/251 (6%)
Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV----VSWTSLIDGLVDHDR 183
+ G + ++ NALI A LFDRM + V+++ LID +
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE--KKRIECKCNV 241
A+ G M++ G++++ S++ G +S G + E K++E
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA---EGFMAEMINKKLEPTVVT 474
Query: 242 STALIDMYAKSGCIESAX----XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
T+L+ Y G I A +T ++SGL GL ++A+ LF EM
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 298 TCNVKPDERTMTAVLSA-CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
NVKP+ T ++ C D+ + A+ +M ++ GI P + ++ L G
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSK-AFEFLKEMTEK-GIVPDTYSYRPLIHGLCLTGQ 592
Query: 357 LKEAEDFMNAM 367
EA+ F++ +
Sbjct: 593 ASEAKVFVDGL 603
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 18/236 (7%)
Query: 152 DLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
D GV+ LF + +LID L + EA LF RM + G+ ND T ++
Sbjct: 360 DFGVSPNLF---------VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX--- 268
G L G + + ++ +LI+ + K G I +A
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTG-LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 269 -XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
+T+++ G S G +A+ L+ EM + P T T +LS A L+R+A +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLI 380
F++M + + ++P + +++ G + +A +F+ M K PD +R LI
Sbjct: 530 FNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 138/349 (39%), Gaps = 29/349 (8%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR-- 157
P++ T+ ++ R G + G Y N+LI+ + FGD+ A
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 158 --ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
E+ ++ + VV++TSL+ G + +A+ L+ M G+ + T ++L
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYAKSGCIESAXXXXXXXXXXX---- 269
+G + R + E K N T +I+ Y + G + A
Sbjct: 520 AGLI---RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVF 328
+ +I GL G EA + N + +E T +L CR L EA V
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL-EEALSVC 635
Query: 329 SDMKKRYGIEPTIQHFGCVVDLLAR-------AGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
+M +R G++ + +G ++D + G LKE D +KPD V++ ++I
Sbjct: 636 QEMVQR-GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD----RGLKPDDVIYTSMID 690
Query: 382 ACKVHEDTERAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSNKAEV 429
A D + A + + G V + +Y N G + N+AEV
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG-FVNEAEV 738
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 133/321 (41%), Gaps = 41/321 (12%)
Query: 96 GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
GV P+ T+ ++ +L + + L + GF DC + IH Y G L
Sbjct: 201 GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVD 260
Query: 156 A----RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
A RE+ ++ +RDVVS++ LIDGL EA+ L G+M++ GVE N T +++R
Sbjct: 261 ALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIR 320
Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVS----TALIDMYAKSGCIESAXXXX----X 263
G MG+ V + + V LID + G + A
Sbjct: 321 -----GLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQ 375
Query: 264 XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA---CRNADL 320
+ +I+GL G EA ++ + V D T + +L + +N D
Sbjct: 376 RGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDA 430
Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA----GCLKEAEDFMNAMP---MKPDA 373
V E +++R+ +E I + ++L +A G EA+ AMP + PD
Sbjct: 431 VLE-------IRRRF-LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 374 VLWRTLIWA-CKVHEDTERAE 393
+ T+I CK + E E
Sbjct: 483 ATYATMIKGYCKTGQIEEALE 503
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 170/421 (40%), Gaps = 33/421 (7%)
Query: 59 NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTF-PFVLKCCARLKL 117
N Y YN M+ Y + +S + PD FT+ ++ C R L
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIV-------EAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD----VVSWTS 173
K + K G + LIH V + A +LF +M D + V ++T
Sbjct: 270 DSAFKVFNEMPLK-GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 174 LIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
LI L +R EA+ L M E G++ N T ++ + R++ G + EK
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 234 RIECKCNVST--ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK---- 287
+ NV T ALI+ Y K G IE A T + L G CK
Sbjct: 389 LMP---NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK-GYCKSNVH 444
Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
+A+ + +M V PD T +++ CR+ + AY + S M R G+ P +
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF-DSAYRLLSLMNDR-GLVPDQWTYTS 502
Query: 347 VVDLLARAGCLKEAEDFMNAMPMK---PDAVLWRTLI-WACKVHEDTERAERLMKQHLEM 402
++D L ++ ++EA D +++ K P+ V++ LI CK + E L K +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
+ +S ++ + + GK + E M K GL + I + L + GD++
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD---GDFD 619
Query: 463 H 463
H
Sbjct: 620 H 620
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 126/327 (38%), Gaps = 42/327 (12%)
Query: 153 LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRA 212
L + +E+ + ++ ++T LID L + +A EL G+MLE G+ N T +++
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 213 CADSGALSMGRKVHGIVKEKK------------RIECKCNVSTA---------------- 244
G + V +++ +K + CK NV A
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDV 462
Query: 245 -----LIDMYAKSGCIESAXXXXXXXXXXXXX----XWTAMISGLASHGLCKEAIDLFLE 295
LID +SG +SA +T+MI L +EA DLF
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
+E V P+ TA++ A V EA+++ M + + P F ++ L G
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLCADG 581
Query: 356 CLKEA---EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYI 411
LKEA E+ M + ++P LI D + A +Q L G D+ +Y
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 412 LASNVYASVGKWSNKAEVRELMNKKGL 438
Y G+ + ++ M + G+
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGV 668
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 128/306 (41%), Gaps = 17/306 (5%)
Query: 63 YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
YN M++AY + H ALSLF M + T PD T+ + + A + L + +
Sbjct: 518 YNVMIKAYGKAK---LHEKALSLFKGMKNQGTW----PDECTYNSLFQMLAGVDLVDEAQ 570
Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV----VSWTSLIDGL 178
++ + G C A+I Y G L A +L++ M V V + SLI+G
Sbjct: 571 RILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
+ EAI+ F M E GV+ N + S+++A + G L R+V+ +K+ +
Sbjct: 631 AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEG-GPD 689
Query: 239 CNVSTALIDMYAKSGCI---ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
S +++ + A G + ES + M+ G+ EAI++ E
Sbjct: 690 VAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEE 749
Query: 296 METCNVKPDERTMTAVLSACRNAD-LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
M + D + V+ AC AD + E +F +M + F + LL +
Sbjct: 750 MRESGLLSDCTSFNQVM-ACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKG 808
Query: 355 GCLKEA 360
G EA
Sbjct: 809 GVPSEA 814
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 142/357 (39%), Gaps = 25/357 (7%)
Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
PD T VL + K+ + + + + + D + + ++ MY G + A+ L
Sbjct: 408 PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKAL 467
Query: 160 FDRMPDRDVVSWTSL---IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL-----R 211
F+R V+S T+L ID + VEA +F + ND +V+ +
Sbjct: 468 FERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGK 527
Query: 212 ACADSGALSM--GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX- 268
A ALS+ G K G + EC N +L M A ++ A
Sbjct: 528 AKLHEKALSLFKGMKNQGTWPD----ECTYN---SLFQMLAGVDLVDEAQRILAEMLDSG 580
Query: 269 ---XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY 325
+ AMI+ GL +A+DL+ ME VKP+E ++++ + +V EA
Sbjct: 581 CKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAI 640
Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE---DFMNAMPMKPDAVLWRTLIWA 382
F M + +G++ ++ ++ GCL+EA D M PD +++
Sbjct: 641 QYFR-MMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSL 699
Query: 383 CKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
C AE + E G D S+ +Y +G EV E M + GL+
Sbjct: 700 CADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLL 756
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 145/368 (39%), Gaps = 26/368 (7%)
Query: 49 RLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFV 108
RL+ + +NS+ Y +L+AY S D + F +RR H + D F + +
Sbjct: 192 RLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYC----EIRRGGHKL---DIFAYNML 244
Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-- 166
L A+ + Q+ + K D Y +I G A LF+ M
Sbjct: 245 LDALAK---DEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL 301
Query: 167 --DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
+VV + +L+ L +AI++F RM+E G N+ T +L G L +
Sbjct: 302 TLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLV---R 358
Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX----XXXXXXXXXXWTAMISGL 280
+ G+V+ KR + + + L+ +K G + A + +M+ L
Sbjct: 359 LDGVVEISKRYMTQ-GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
G EAI++ ++ V D V SA + + +F MKK G P
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD-GPSPD 476
Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPM---KPDAVLWRTLIWACKVHEDTERAERLMK 397
I + ++ R G + EA + + KPD + + +LI + D + A K
Sbjct: 477 IFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFK 536
Query: 398 QHLEMGVD 405
+ E G++
Sbjct: 537 EMQEKGLN 544
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 21/271 (7%)
Query: 139 IMNALIHMYSVFGDLGVARELFDRM------PDRDVVSWTSLIDGLVDHDRPVEAIELFG 192
I + L+ S G + A LF M +RD S+ S+++ L + +EAIE+
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SYMSMLESLCGAGKTIEAIEMLS 431
Query: 193 RMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST--ALIDMYA 250
++ E GV + +V A G L +H + ++ K+ ++ T LI +
Sbjct: 432 KIHEKGVVTDTMMYNTVFSAL---GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 251 KSGCIESAXXXXXXXXXXX----XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
+ G ++ A + ++I+ L +G EA F EM+ + PD
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
T + ++ + V AY +F +M + G +P I + ++D L + G EA D +
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEMLVK-GCQPNIVTYNILLDCLEKNGRTAEAVDLYSK 607
Query: 367 MP---MKPDAVLWRTLIWACKVHEDTERAER 394
M + PD++ + L V R R
Sbjct: 608 MKQQGLTPDSITYTVLERLQSVSHGKSRIRR 638
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 149/366 (40%), Gaps = 16/366 (4%)
Query: 13 HAQILKLGTSNNDAPRNFSKLFTFAALSPSGD---LNYARLLLTSNPALNSYYYNTMLRA 69
H+++ KL + N++ + LS GD L Y R L + ++ + ++
Sbjct: 78 HSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGY-RFFLWATKQPGYFHSYEVCKS 136
Query: 70 YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
+ F A+ I +R+ + P+ F +++ A + ++ ++ +
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTNPELIEPE--LFVVLMRRFASANMVKKAVEVLDEMP 194
Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR---DVVSWTSLIDGLVDHDRPVE 186
K G D Y+ L+ G + A ++F+ M ++ ++ +TSL+ G + +E
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLME 254
Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
A E+ +M EAG+E + ++L A +G ++ + ++ K+ E N T LI
Sbjct: 255 AKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR-KRGFEPNVNCYTVLI 313
Query: 247 DMYAKSG-----CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
++ + +TA+ISG G+ + + +M V
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
P + T ++ A + E + MK+R G P + + V+ L + G +KEA
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR-GCHPDLLIYNVVIRLACKLGEVKEAV 432
Query: 362 DFMNAM 367
N M
Sbjct: 433 RLWNEM 438