Miyakogusa Predicted Gene

Lj1g3v3171150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3171150.1 tr|G7KUQ4|G7KUQ4_MEDTR Coiled-coil
domain-containing protein MTMR15 OS=Medicago truncatula
GN=MTR_7g,84.7,0,no description,VRR-NUC domain; VRR_NUC,VRR-NUC
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NU,CUFF.30144.1
         (515 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g52030.1                                                       846   0.0  
Glyma08g29160.1                                                       755   0.0  
Glyma13g22170.1                                                        75   2e-13

>Glyma18g52030.1 
          Length = 688

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/510 (80%), Positives = 447/510 (87%), Gaps = 30/510 (5%)

Query: 1   MNDILNVLTVSELREIWCLLLKKNCGRGMKKQDLISSLLSTHAGVLWAHLVTIILDRTGS 60
           +NDILN+L+V ELREIW                                L T+ILDRTGS
Sbjct: 209 LNDILNILSVCELREIW------------------------------PQLSTMILDRTGS 238

Query: 61  CIKISSKAETLIWRTERLFFLNGEQDLSSFLLVDMGKMKYPTYNCIISEPIFSNRSNLLA 120
           CI+ISSKAE+L+WRTERLFFLNGEQDLSSFLLVDMGK+KYP YNCIISEPIFSNR+NLL+
Sbjct: 239 CIRISSKAESLMWRTERLFFLNGEQDLSSFLLVDMGKIKYPAYNCIISEPIFSNRNNLLS 298

Query: 121 YEEAIEVAQLMDEALDANRDDVVLRCIKNAESYVSTALPIQYSTSESASTIRQLFTASYV 180
           YEEAIEVAQ+ DEALDAN+ DVVLRCI  AES VST  PIQ STSES S+IR +FT+S+V
Sbjct: 299 YEEAIEVAQITDEALDANKIDVVLRCINIAESCVSTDFPIQCSTSESVSSIRHVFTSSWV 358

Query: 181 YSKVVTLGISFLEQERRYNEAIDLLKWLQNVFTCDVKRGYWTLRLSVDLEHLGRFEESLQ 240
           YSKVVT+GISFLE+E RY +AI+LL+WL NVFTCDV+RGYWTLRLSVDLEHLG  +ESLQ
Sbjct: 359 YSKVVTVGISFLEREHRYIDAINLLQWLLNVFTCDVRRGYWTLRLSVDLEHLGYIDESLQ 418

Query: 241 VAENGLLDPWVRAGSRLALQRRVLRLGKPPRRWKVPSFSRSALRKIPEIYVQGRPLNSEL 300
           VAENGLLDPW+RAGSR+ALQRRVLRLGKPPRRWKVPSFSRSALRKIPE++VQGRPLNSEL
Sbjct: 419 VAENGLLDPWIRAGSRMALQRRVLRLGKPPRRWKVPSFSRSALRKIPEVFVQGRPLNSEL 478

Query: 301 GAKNRFYNEEGEQCGVEELALHYYAGEGGGWQGVHTESGIWLTIFGLLMWDVIYADVPNV 360
           G KNR+YNE G+QCGVEE+ALHYYAG+GGGWQGVH ESGIWLTIFGLLMWDVIYADVPNV
Sbjct: 479 GEKNRYYNEAGKQCGVEEIALHYYAGDGGGWQGVHAESGIWLTIFGLLMWDVIYADVPNV 538

Query: 361 FYTRFQNAPLDLGTDSFYTARKSSIESRLQQIRDGMAEEFLIKSWETHMGTACRGVNWDR 420
           FYTRFQNAPLD GTD FYTARKSSIES LQQIRDGMAEEFLIKSWETH+GTACRGVNW  
Sbjct: 539 FYTRFQNAPLDFGTDDFYTARKSSIESHLQQIRDGMAEEFLIKSWETHIGTACRGVNWGC 598

Query: 421 HSLDELRAAVTCVGGSCLASLCELLCQDYRSWSSGMPDLLLWRFCGEYSGEAKLVEVKGP 480
           HSLDELRA V+CVGG+CLASLC+LL QDYRSWSSGMPDLLLWRF GEYSGEAKLVEVKGP
Sbjct: 599 HSLDELRAVVSCVGGTCLASLCKLLAQDYRSWSSGMPDLLLWRFHGEYSGEAKLVEVKGP 658

Query: 481 RDRLSEQQRAWLMLLMDCGFMIEVCKVKPL 510
           RDRLSEQQRAWL+LL+D GF IEVCKVKPL
Sbjct: 659 RDRLSEQQRAWLLLLLDYGFTIEVCKVKPL 688


>Glyma08g29160.1 
          Length = 699

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/523 (73%), Positives = 416/523 (79%), Gaps = 62/523 (11%)

Query: 1   MNDILNVLTVSELREIWCLLLKKNCGRGMKKQDLISSLLSTHAGVLWAHLVTIILDRTGS 60
           +NDILNVL+VSEL EIW                                L T+ILDRT  
Sbjct: 219 VNDILNVLSVSELHEIW------------------------------PQLSTMILDRTVF 248

Query: 61  CIKISSKAETLIWRTERLFFLNGEQDLSSFLLVDMGKMKYPTYNCIISEPIFSNRSNLLA 120
           CI+ISSKAE+L+WR ERLFFLNGEQDLSSFLLVDMGK+ YP YNCIISEPIFSNR+NLL+
Sbjct: 249 CIRISSKAESLMWRIERLFFLNGEQDLSSFLLVDMGKIVYPAYNCIISEPIFSNRNNLLS 308

Query: 121 YEEAIEVAQLMDEALDANRDDVVLRCIKNAESYVSTALPIQYSTSESASTIRQLFTASYV 180
           YEEAIEVAQ+MDEALDAN+ DVVLRCIK AES VST  PIQ STSES S+IR++FTAS+V
Sbjct: 309 YEEAIEVAQIMDEALDANKTDVVLRCIKIAESCVSTDFPIQCSTSESVSSIRRVFTASWV 368

Query: 181 YSKVVTLGISFLEQERRYNEAIDLLKWLQNVFTCDVKRGYWTLRLSVDLEHLGRFEESLQ 240
           YSKVVT+GISFLE+ERRY +AI+LLKWL NVFTCDVKRGYWTLRLSVDLE+LG   ESLQ
Sbjct: 369 YSKVVTVGISFLERERRYIDAINLLKWLLNVFTCDVKRGYWTLRLSVDLEYLGCTNESLQ 428

Query: 241 VAENGLLDPWVRAGSRLALQRRVLRLGKPPRRWKVPSFSRSA------------------ 282
           +AENGLLDPW+RAGSR+ALQRRVL LGK PR W VPSFS                     
Sbjct: 429 IAENGLLDPWIRAGSRMALQRRVLHLGKQPRHWNVPSFSSLCPFLVKLILLIFFNIMAIS 488

Query: 283 --LRKIPEIYVQGRPLNSELGAKNRFYNEEGEQCGVEELALHYYAGEGGGWQGVHTESGI 340
             L  IP ++VQGRPLNSELG KNR+YNEEG+QCGVEELALHYYA +GGGW GVH ESGI
Sbjct: 489 LWLVMIP-VFVQGRPLNSELGEKNRYYNEEGKQCGVEELALHYYARDGGGWLGVHAESGI 547

Query: 341 WLTIFGLLMWDVIYADVPNVFYTRFQNAPLDLGTDSFYTARKSSIESRLQQIRDGMAEEF 400
           WLTIFGLLMWDVIYADVPNVFYTRFQNAPLD GTDSFYT           QI DGMAEEF
Sbjct: 548 WLTIFGLLMWDVIYADVPNVFYTRFQNAPLDFGTDSFYT-----------QICDGMAEEF 596

Query: 401 LIKSWETHMGTACRGVNWDRHSLDELRAAVTCVGGSCLASLCELLCQDYRSWSSGMPDLL 460
           LIKSWETH+GTACRGVNWD H LDEL A VTCVGG CLASLC+LL QDYRSWSSGMPDLL
Sbjct: 597 LIKSWETHIGTACRGVNWDCHPLDELHAIVTCVGGICLASLCKLLAQDYRSWSSGMPDLL 656

Query: 461 LWRFCGEYSGEAKLVEVKGPRDRLSEQQRAWLMLLMDCGFMIE 503
           LWRF GEYSGEAKLVEVKGP+DRLSEQQRAWL+LLMD GF IE
Sbjct: 657 LWRFHGEYSGEAKLVEVKGPKDRLSEQQRAWLLLLMDSGFTIE 699


>Glyma13g22170.1 
          Length = 107

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 41/61 (67%), Gaps = 11/61 (18%)

Query: 371 DLGTDSFYTARKSSIESRLQQIRDGMAEEFLIKSWETHMGTACRGVNWDRHSLDELRAAV 430
           D  TD FYT RKSSIES LQQIRDGMA+EFLIK           GVNW  HSLDELRA  
Sbjct: 23  DFSTDDFYTTRKSSIESHLQQIRDGMAKEFLIK-----------GVNWGCHSLDELRAHF 71

Query: 431 T 431
           +
Sbjct: 72  S 72