Miyakogusa Predicted Gene

Lj1g3v3171150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3171150.1 tr|G7KUQ4|G7KUQ4_MEDTR Coiled-coil
domain-containing protein MTMR15 OS=Medicago truncatula
GN=MTR_7g,84.7,0,no description,VRR-NUC domain; VRR_NUC,VRR-NUC
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NU,CUFF.30144.1
         (515 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g022220.1 | fanconi-associated nuclease-like protein | HC ...   935   0.0  

>Medtr7g022220.1 | fanconi-associated nuclease-like protein | HC |
           chr7:7128425-7118967 | 20130731
          Length = 909

 Score =  935 bits (2417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/510 (87%), Positives = 478/510 (93%), Gaps = 3/510 (0%)

Query: 1   MNDILNVLTVSELREIWCLLLKKNCGRGMKKQDLISSLLSTHAGVLWAHLVTIILDRTGS 60
           MNDIL+VLTVSELREIW  LLKK+CG GMKKQDLISS+LST+AG LW HL T+ILDRTG 
Sbjct: 403 MNDILDVLTVSELREIWSFLLKKSCGHGMKKQDLISSILSTYAG-LWTHLSTMILDRTGF 461

Query: 61  CIKISSKAETLIWRTERLFFLNGEQDLSSFLLVDMGKMKYPTYNCIISEPIFSNRSNLLA 120
           C+KISSKAE+LIWR ERLFFLNGEQDLSSFLLVD+GK+KYPTY C + EPIFS+R+NLLA
Sbjct: 462 CVKISSKAESLIWRIERLFFLNGEQDLSSFLLVDIGKVKYPTYTCTVLEPIFSSRTNLLA 521

Query: 121 YEEAIEVAQLMDEALDANRDDVVLRCIKNAESYVSTALPIQYSTSESASTIRQLFTASYV 180
           YEEAIE+AQ+MDEALDAN+ DVVLRCIK AES VST LPI+Y TSES ST   LFTA +V
Sbjct: 522 YEEAIELAQIMDEALDANKTDVVLRCIKIAESRVSTVLPIEYLTSESVSTFHHLFTAPWV 581

Query: 181 YSKVVTLGISFLEQERRYNEAIDLLKWLQNVFTCDVKRGYWTLRLSVDLEHLGRFEESLQ 240
           YSKV+TLGISFLEQERRY++A+DLLKWLQNV+TCDVKRGYWTLRLSVDLEHLG  +ESLQ
Sbjct: 582 YSKVITLGISFLEQERRYSDAVDLLKWLQNVYTCDVKRGYWTLRLSVDLEHLGYIDESLQ 641

Query: 241 VAENGLLDPWVRAGSRLALQRRVLRLGKPPRRWKVPSFSRSALRKIPEIYVQGRPLNSEL 300
           VAENGLLDPWVRAGSR+ALQRRVLRLGKPPRRWKVPSFSRS LRKIPE+YVQGRPLNSEL
Sbjct: 642 VAENGLLDPWVRAGSRMALQRRVLRLGKPPRRWKVPSFSRSVLRKIPEVYVQGRPLNSEL 701

Query: 301 GAKNRFYNEEGEQCGVEELALHYYAGEGGGWQGVHTESGIWLTIFGLLMWDVIYADVPNV 360
           GAKNRFYNEEG QCGVEELALHYYAGE  GWQGVHTESGIWLT+FGLLMWDVIYADVPNV
Sbjct: 702 GAKNRFYNEEGTQCGVEELALHYYAGE--GWQGVHTESGIWLTVFGLLMWDVIYADVPNV 759

Query: 361 FYTRFQNAPLDLGTDSFYTARKSSIESRLQQIRDGMAEEFLIKSWETHMGTACRGVNWDR 420
           FYTRFQNAPLDLGTDSFYTARKS +ES +QQIRDGMAEEFLIKSWETH GT+CRGVNWDR
Sbjct: 760 FYTRFQNAPLDLGTDSFYTARKSIVESHMQQIRDGMAEEFLIKSWETHNGTSCRGVNWDR 819

Query: 421 HSLDELRAAVTCVGGSCLASLCELLCQDYRSWSSGMPDLLLWRFCGEYSGEAKLVEVKGP 480
           HSLDELRAAVTCVGGSCLAS C LLC+DYRSWSSGMPDLLLWRFCGEYSGEAKLVEVKGP
Sbjct: 820 HSLDELRAAVTCVGGSCLASFCLLLCEDYRSWSSGMPDLLLWRFCGEYSGEAKLVEVKGP 879

Query: 481 RDRLSEQQRAWLMLLMDCGFMIEVCKVKPL 510
           +DRLSEQQRAWL++LMDCGFM+EVCKVKPL
Sbjct: 880 KDRLSEQQRAWLLMLMDCGFMVEVCKVKPL 909