Miyakogusa Predicted Gene

Lj1g3v3104080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3104080.1 Non Characterized Hit- tr|G0R1F7|G0R1F7_ICHMG
Putative uncharacterized protein OS=Ichthyophthirius
m,46.43,6e-16,TPR,Tetratricopeptide repeat; seg,NULL; no
description,Tetratricopeptide-like helical; Apc3,NULL; TP,CUFF.30055.1
         (509 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g016680.1 | cell division cycle-like protein | HC | chr6:6...   724   0.0  
Medtr7g019230.1 | cell division cycle-like protein | HC | chr7:6...   681   0.0  
Medtr7g019230.2 | cell division cycle-like protein | HC | chr7:6...   652   0.0  
Medtr6g033355.1 | hypothetical protein | LC | chr6:10715981-1070...   111   2e-24

>Medtr6g016680.1 | cell division cycle-like protein | HC |
           chr6:6381476-6392651 | 20130731
          Length = 755

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/512 (69%), Positives = 405/512 (79%), Gaps = 10/512 (1%)

Query: 1   MEAILTDCVHKSLRHFMHNNAIFLCHRLCAEFPTETNLQLLASCYLQSNQAHSAYHILKG 60
           ME+IL +CV  +L HFMH+NAIF+   LCA+FP+ETNLQLLA+CYLQ+NQA+SAYHILKG
Sbjct: 1   MESILINCVQNNLHHFMHSNAIFISQLLCAQFPSETNLQLLAACYLQNNQAYSAYHILKG 60

Query: 61  TQMAQSRYLFAISCFQMDLLSEAEAALCPVNEPSAEVPNGAAGHHLLGLIYRYTDRRRSA 120
           T+M QSRYLFAISCF M+LL EAEAALCP NEP AEVPNGA GH+LLG +YRYTDR++ A
Sbjct: 61  TKMPQSRYLFAISCFHMNLLGEAEAALCPANEPGAEVPNGAPGHYLLGQVYRYTDRKKRA 120

Query: 121 IHHFKQALLVDPLMWAAYEELCILGAAEEATAVFGEAAALCIQKQYLNCSTTPKLHSSTE 180
           I HFKQAL  DPLMWAAYEELCILG AEEAT VFGEAA+ C+QKQYLNCST+P L  S E
Sbjct: 121 IDHFKQALSKDPLMWAAYEELCILGDAEEATTVFGEAASFCMQKQYLNCSTSPNL--SAE 178

Query: 181 DCNLVDTRHSASEDVNPRQLKLMQGLKDIPLNHHGASILGGTSGQPINSGPSNISFYNTP 240
           DCN+V T +S SEDV+PR+L+LMQGLKDI  N HG+SI+GG + Q I+SG SN+SFYNTP
Sbjct: 179 DCNVVAT-NSVSEDVSPRKLRLMQGLKDIAANPHGSSIIGGAASQLISSGSSNMSFYNTP 237

Query: 241 SPMVTQLSGVAPPPLCRNVQLNGSNLSTVGAESSPKSTVNST----IQAPRRKFVDEGKL 296
           SPM TQLS VAPPPLCRNV  NG NLST+ +++SPKSTVNST    IQAPRRKFV EGKL
Sbjct: 238 SPMATQLSSVAPPPLCRNVMPNGPNLSTLNSDNSPKSTVNSTIQAPIQAPRRKFVGEGKL 297

Query: 297 RKISGRLFSDSGPRRSPRLXXXXXXXXXXXXTVVSGNGTXXXXXXXXXXXXXXMAFRTMT 356
           RKISGRLFSDS PRRS RL            T++SGNGT              M FRTMT
Sbjct: 298 RKISGRLFSDS-PRRSSRLSNEASVSSNANATMLSGNGT--SNSYKGGSKLGPMTFRTMT 354

Query: 357 VRKGQSWANENVDEGIRNDVLDDSRLNVXXXXXXXXXXMEVTSNDQEAVNFQVGGQVISG 416
           VRKGQSWANEN+D GI ND +D SRLN+          +E  + +Q+A   QV GQ  S 
Sbjct: 355 VRKGQSWANENMDGGIHNDAVDVSRLNISSTTSCSSAAVEAKAYEQDATTLQVSGQATSE 414

Query: 417 SKVITGASEILTLLRVFGEGFRLACLYRCQDALDTYLKLPHKHYNTGWVLSLVGRLHFEL 476
           SKVITGASEILT+LRV GEG+RLACLYRC++ALDTYLKLP +HYNTGWVLS VG+ H+EL
Sbjct: 415 SKVITGASEILTILRVLGEGYRLACLYRCKEALDTYLKLPQRHYNTGWVLSQVGKAHYEL 474

Query: 477 VDYLEADRAFGLARQIMPYSLEGMDVYSTVLY 508
           VD LEADR F LARQI PYSLEGMD+YSTVLY
Sbjct: 475 VDNLEADRVFSLARQIAPYSLEGMDIYSTVLY 506


>Medtr7g019230.1 | cell division cycle-like protein | HC |
           chr7:6427562-6417956 | 20130731
          Length = 691

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/446 (75%), Positives = 367/446 (82%), Gaps = 4/446 (0%)

Query: 63  MAQSRYLFAISCFQMDLLSEAEAALCPVNEPSAEVPNGAAGHHLLGLIYRYTDRRRSAIH 122
           MAQSRYLFAISCFQM+LL+EAEA LCP NEPSAEVPNG+AGH+LLGLIYRYTDR+++A+H
Sbjct: 1   MAQSRYLFAISCFQMNLLNEAEATLCPANEPSAEVPNGSAGHYLLGLIYRYTDRKKNAVH 60

Query: 123 HFKQALLVDPLMWAAYEELCILGAAEEATAVFGEAAALCIQKQYLNCSTTPKLHSSTEDC 182
           HFK AL +DPLMWAAYEELCILG+AEEA A FGEAAALCIQKQYLN ST+PKLHSSTEDC
Sbjct: 61  HFKMALSMDPLMWAAYEELCILGSAEEAVAFFGEAAALCIQKQYLNFSTSPKLHSSTEDC 120

Query: 183 NLVDTRHSASEDVNPRQLKLMQGLKDIPLNHHGASILGGTSGQPINSGPSNISFYNTPSP 242
           NLVDTRH  SED +PRQ KLMQGLKDI  NHHGA +LGGTSGQPINSG SNISFYNTP+P
Sbjct: 121 NLVDTRHCVSEDASPRQSKLMQGLKDISGNHHGAPVLGGTSGQPINSGLSNISFYNTPAP 180

Query: 243 MVTQLSGVAPPPLCRNVQLNGSNLSTVGAESSPKSTVNSTIQAPRRKFVDEGKLRKISGR 302
            +TQLSGVA PPLCRNVQ NGSN+ST  AE+SP+STVNSTIQA RRKFVDEGKLRKISGR
Sbjct: 181 TMTQLSGVA-PPLCRNVQPNGSNMSTQSAENSPRSTVNSTIQA-RRKFVDEGKLRKISGR 238

Query: 303 LFSDSGPRRSPRLXXXXXXXXXXXXTVVSGNGTXXXXXXXXXXXXXXMAFRTMTVRKGQS 362
           LFSDS PRRS RL            T VSGNGT               AFR++TVRKGQ 
Sbjct: 239 LFSDS-PRRSSRLSGDASVNANPNTTAVSGNGTNYSSKHLGGSKPSSRAFRSVTVRKGQP 297

Query: 363 WANENVDEGIRNDVLDDSRLNVXXXXXXXXXXMEVTSNDQEAVNFQVGGQVISGSKVITG 422
           WANEN+DEG  ND+LDDS LN+          ME  S +QEA N  VGGQV+S SKVITG
Sbjct: 298 WANENIDEGNHNDILDDSLLNITSTTSTSSSTMEAKSYEQEAANIPVGGQVLSSSKVITG 357

Query: 423 ASEILTLLRVFGEGFRLACLYRCQDALDTYLKLPHKHYNTGWVLSLVGRLHFELVDYLEA 482
           ASEILTLLRV GE FRLACLYRCQDAL+TY KLPHKHYNTGWVLS VG++++E  DYLEA
Sbjct: 358 ASEILTLLRVLGEAFRLACLYRCQDALETYQKLPHKHYNTGWVLSQVGKMYYEF-DYLEA 416

Query: 483 DRAFGLARQIMPYSLEGMDVYSTVLY 508
           DRAFGLARQ+ PY+LEGMDVYSTVLY
Sbjct: 417 DRAFGLARQMTPYNLEGMDVYSTVLY 442


>Medtr7g019230.2 | cell division cycle-like protein | HC |
           chr7:6427520-6417956 | 20130731
          Length = 677

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/432 (74%), Positives = 353/432 (81%), Gaps = 4/432 (0%)

Query: 77  MDLLSEAEAALCPVNEPSAEVPNGAAGHHLLGLIYRYTDRRRSAIHHFKQALLVDPLMWA 136
           M+LL+EAEA LCP NEPSAEVPNG+AGH+LLGLIYRYTDR+++A+HHFK AL +DPLMWA
Sbjct: 1   MNLLNEAEATLCPANEPSAEVPNGSAGHYLLGLIYRYTDRKKNAVHHFKMALSMDPLMWA 60

Query: 137 AYEELCILGAAEEATAVFGEAAALCIQKQYLNCSTTPKLHSSTEDCNLVDTRHSASEDVN 196
           AYEELCILG+AEEA A FGEAAALCIQKQYLN ST+PKLHSSTEDCNLVDTRH  SED +
Sbjct: 61  AYEELCILGSAEEAVAFFGEAAALCIQKQYLNFSTSPKLHSSTEDCNLVDTRHCVSEDAS 120

Query: 197 PRQLKLMQGLKDIPLNHHGASILGGTSGQPINSGPSNISFYNTPSPMVTQLSGVAPPPLC 256
           PRQ KLMQGLKDI  NHHGA +LGGTSGQPINSG SNISFYNTP+P +TQLSGVA PPLC
Sbjct: 121 PRQSKLMQGLKDISGNHHGAPVLGGTSGQPINSGLSNISFYNTPAPTMTQLSGVA-PPLC 179

Query: 257 RNVQLNGSNLSTVGAESSPKSTVNSTIQAPRRKFVDEGKLRKISGRLFSDSGPRRSPRLX 316
           RNVQ NGSN+ST  AE+SP+STVNSTIQA RRKFVDEGKLRKISGRLFSDS PRRS RL 
Sbjct: 180 RNVQPNGSNMSTQSAENSPRSTVNSTIQA-RRKFVDEGKLRKISGRLFSDS-PRRSSRLS 237

Query: 317 XXXXXXXXXXXTVVSGNGTXXXXXXXXXXXXXXMAFRTMTVRKGQSWANENVDEGIRNDV 376
                      T VSGNGT               AFR++TVRKGQ WANEN+DEG  ND+
Sbjct: 238 GDASVNANPNTTAVSGNGTNYSSKHLGGSKPSSRAFRSVTVRKGQPWANENIDEGNHNDI 297

Query: 377 LDDSRLNVXXXXXXXXXXMEVTSNDQEAVNFQVGGQVISGSKVITGASEILTLLRVFGEG 436
           LDDS LN+          ME  S +QEA N  VGGQV+S SKVITGASEILTLLRV GE 
Sbjct: 298 LDDSLLNITSTTSTSSSTMEAKSYEQEAANIPVGGQVLSSSKVITGASEILTLLRVLGEA 357

Query: 437 FRLACLYRCQDALDTYLKLPHKHYNTGWVLSLVGRLHFELVDYLEADRAFGLARQIMPYS 496
           FRLACLYRCQDAL+TY KLPHKHYNTGWVLS VG++++E  DYLEADRAFGLARQ+ PY+
Sbjct: 358 FRLACLYRCQDALETYQKLPHKHYNTGWVLSQVGKMYYEF-DYLEADRAFGLARQMTPYN 416

Query: 497 LEGMDVYSTVLY 508
           LEGMDVYSTVLY
Sbjct: 417 LEGMDVYSTVLY 428


>Medtr6g033355.1 | hypothetical protein | LC |
           chr6:10715981-10706515 | 20130731
          Length = 301

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 71/109 (65%), Gaps = 18/109 (16%)

Query: 196 NPRQLKLMQGLKDIPLNHHGASILGGTSGQPINSGPSNISFYNTPSPMVTQLSGVAPPPL 255
           N RQL+LMQGLKD   N HG+SI+GG                     +  +LS VAPPPL
Sbjct: 204 NQRQLRLMQGLKDNAANLHGSSIIGGAPR------------------LQLRLSSVAPPPL 245

Query: 256 CRNVQLNGSNLSTVGAESSPKSTVNSTIQAPRRKFVDEGKLRKISGRLF 304
           C+NV  NG NLST+ +++SPKSTVNSTIQAPRRKFV EGKLRK+   + 
Sbjct: 246 CKNVMPNGPNLSTLDSDNSPKSTVNSTIQAPRRKFVGEGKLRKVGSNIL 294