Miyakogusa Predicted Gene

Lj1g3v3104080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3104080.1 Non Chatacterized Hit- tr|G0R1F7|G0R1F7_ICHMG
Putative uncharacterized protein OS=Ichthyophthirius
m,46.43,6e-16,TPR,Tetratricopeptide repeat; seg,NULL; no
description,Tetratricopeptide-like helical; Apc3,NULL; TP,CUFF.30055.1
         (509 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20000.1 | Symbols: HBT, CDC27b | CDC27  family protein | chr...   640   0.0  
AT3G16320.1 | Symbols: CDC27a | Tetratricopeptide repeat (TPR)-l...   238   8e-63

>AT2G20000.1 | Symbols: HBT, CDC27b | CDC27  family protein |
           chr2:8632324-8636900 REVERSE LENGTH=744
          Length = 744

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/511 (61%), Positives = 378/511 (73%), Gaps = 19/511 (3%)

Query: 1   MEAILTDCVHKSLRHFMHNNAIFLCHRLCAEFPTETNLQLLASCYLQSNQAHSAYHILKG 60
           MEA+L DCV+ SLRHF++ NAIF+C RLCAEFP+E NLQLLA+ YLQ+NQA+SAYH+LKG
Sbjct: 1   MEAMLVDCVNNSLRHFVYKNAIFMCERLCAEFPSEVNLQLLATSYLQNNQAYSAYHLLKG 60

Query: 61  TQMAQSRYLFAISCFQMDLLSEAEAALCPVNEPSAEVPNGAAGHHLLGLIYRYTDRRRSA 120
           TQMAQSRYLFA+SCFQMDLL+EAE+ALCPVNEP AE+PNGAAGH+LLGLIY+YTDRR++A
Sbjct: 61  TQMAQSRYLFALSCFQMDLLNEAESALCPVNEPGAEIPNGAAGHYLLGLIYKYTDRRKNA 120

Query: 121 IHHFKQALLVDPLMWAAYEELCILGAAEEATAVFGEAAALCIQKQYL-NCSTTPKLHSST 179
              FKQ+L +DPL+WAAYEELCILGAAEEATAVFGE AAL IQKQY+   ST+  L++  
Sbjct: 121 AQQFKQSLTIDPLLWAAYEELCILGAAEEATAVFGETAALSIQKQYMQQLSTSLGLNTYN 180

Query: 180 EDCNLVDTRHSASEDVNPRQLKLMQ--GLKDIPLNHHGASILGGTSGQPINSGPSNISFY 237
           E+ N   T++++SED +PRQ K  Q  GLKDI  N H            +N G SN+SFY
Sbjct: 181 EERNSTSTKNTSSEDYSPRQSKHTQSHGLKDISGNFH---------SHGVNGGVSNMSFY 231

Query: 238 NTPSPMVTQLSGVAPPPLCRNVQLNGSNLSTVGAESSPKSTVNSTIQAPRRKFVDEGKLR 297
           NTPSP+  QLSG+APPPL RN Q   +N +++  +SSPKSTVNST+QAPRRKFVDEGKLR
Sbjct: 232 NTPSPVAAQLSGIAPPPLFRNFQPAVANPNSLITDSSPKSTVNSTLQAPRRKFVDEGKLR 291

Query: 298 KISGRLFSDSGPRRSPRLXXXXXXXXXXXXTVVSGNGTXXXXXXXXXXXXXXMAFRTMTV 357
           KISGRLFSDSGPRRS RL              VSGN                +A R++T+
Sbjct: 292 KISGRLFSDSGPRRSSRLSADSGANINSSVATVSGN-VNNASKYLGGSKLSSLALRSVTL 350

Query: 358 RKGQSWANENVDEGIRNDVLDDSRLNVXXXXXXXXXXMEVTSNDQEAVNFQVGGQVISGS 417
           RKG SWANEN+DEG+R +  DDSR N             + SNDQE     +GG  +S  
Sbjct: 351 RKGHSWANENMDEGVRGEPFDDSRPNTASTTGS------MASNDQEDETMSIGGIAMSSQ 404

Query: 418 KVITGASEILTLLRVFGEGFRLACLYRCQDALDTYLKLPHKHYNTGWVLSLVGRLHFELV 477
            +  G SEIL LLR  GEG RL+ +YRCQ+ALDTY+KLPHKHYNTGWVLS VG+ +FEL+
Sbjct: 405 TITIGVSEILNLLRTLGEGCRLSYMYRCQEALDTYMKLPHKHYNTGWVLSQVGKAYFELI 464

Query: 478 DYLEADRAFGLARQIMPYSLEGMDVYSTVLY 508
           DYLEA++AF LAR   PY LEGMD+YSTVLY
Sbjct: 465 DYLEAEKAFRLARLASPYCLEGMDIYSTVLY 495


>AT3G16320.1 | Symbols: CDC27a | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:5529534-5534465 FORWARD
           LENGTH=717
          Length = 717

 Score =  238 bits (607), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 141/304 (46%), Positives = 183/304 (60%), Gaps = 36/304 (11%)

Query: 1   MEAILTDCVHKSLRHFMHNNAIFLCHRLCAEFPTETNLQLLASCYLQSNQAHSAYHILKG 60
           ME +L +CV K+L HFM  NAIFLC  L A+FP+E NLQLLA CYL ++QA+SAY+ILKG
Sbjct: 2   MENLLANCVQKNLNHFMFTNAIFLCELLLAQFPSEVNLQLLARCYLSNSQAYSAYYILKG 61

Query: 61  TQMAQSRYLFAISCFQMDLLSEAEAALCPVNEPSAEVPNGAAGHHLLGLIYRYTDRRRSA 120
           ++  QSRYLFA SCF++DLL EAEAAL P  + + EVP GAAGH+LLGLIYRY+ R+  +
Sbjct: 62  SKTPQSRYLFAFSCFKLDLLGEAEAALLPCEDYAEEVPGGAAGHYLLGLIYRYSGRKNCS 121

Query: 121 IHHFKQALLVDPLMWAAYEELCILGAAEEATAVFGEAAALCIQK----QYLNCSTTPKLH 176
           I  F+ AL  DPL W AY ELC LGAAEEA+ VFG  A+  +QK    Q ++ S    + 
Sbjct: 122 IQQFRMALSFDPLCWEAYGELCSLGAAEEASTVFGNVASQRLQKTCVEQRISFSEGATID 181

Query: 177 SSTE-DCNLVDTRHSASEDV---NPRQLKLMQGLKDIPLNHHGASILGGTSGQPINSGPS 232
             T+ D  L DT  S +E +   N + LK+MQ   DIP N         T  Q   +G  
Sbjct: 182 QITDSDKALKDTGLSQTEHIPGENQQDLKIMQQPGDIPPN---------TDRQLSTNGWD 232

Query: 233 NISFYNTPSPMVTQLSGVAPPPLCRNVQ---LNGSNLSTVGAESSPKSTVNSTIQAPRRK 289
                NTPSP++ Q+    PP L +N++   + GS +S  G            ++  RR 
Sbjct: 233 ----LNTPSPVLLQVMDALPPLLLKNMRRPAVEGSLMSVHG------------VRVRRRN 276

Query: 290 FVDE 293
           F  E
Sbjct: 277 FFSE 280



 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 65/90 (72%)

Query: 419 VITGASEILTLLRVFGEGFRLACLYRCQDALDTYLKLPHKHYNTGWVLSLVGRLHFELVD 478
           +I+G SE+L+LL++ G+G R   +Y+CQ+AL  Y KL  K YNT WVL  VG+ +FEL D
Sbjct: 377 LISGISEVLSLLKILGDGHRHLHMYKCQEALLAYQKLSQKQYNTHWVLMQVGKAYFELQD 436

Query: 479 YLEADRAFGLARQIMPYSLEGMDVYSTVLY 508
           Y  AD +F LA Q  PY+LEGMD YSTVLY
Sbjct: 437 YFNADSSFTLAHQKYPYALEGMDTYSTVLY 466