Miyakogusa Predicted Gene
- Lj1g3v3104080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3104080.1 Non Chatacterized Hit- tr|G0R1F7|G0R1F7_ICHMG
Putative uncharacterized protein OS=Ichthyophthirius
m,46.43,6e-16,TPR,Tetratricopeptide repeat; seg,NULL; no
description,Tetratricopeptide-like helical; Apc3,NULL; TP,CUFF.30055.1
(1527 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343470 similar to UniRef100_A7PEI4 Cluster: Chromosom... 1273 0.0
gnl|LJGI|DC595233 homologue to UniRef100_A6BL28 Cluster: Cdc27B;... 119 5e-26
gnl|LJGI|BP053302 similar to UniRef100_Q9SL81 Cluster: CDC27/NUC... 66 7e-10
>gnl|LJGI|FS343470 similar to UniRef100_A7PEI4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 735
Score = 1273 bits (642), Expect = 0.0
Identities = 642/642 (100%)
Strand = Plus / Plus
Query: 1 atggaagcgattctcacagattgcgtgcacaagagtctccgccatttcatgcacaacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 atggaagcgattctcacagattgcgtgcacaagagtctccgccatttcatgcacaacaac 153
Query: 61 gccatcttcctctgccaccgtctctgcgctgagttccccactgagacaaatctccaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gccatcttcctctgccaccgtctctgcgctgagttccccactgagacaaatctccaattg 213
Query: 121 ttggctagctgttacttgcagagtaatcaagcgcattctgcgtaccatattttaaaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ttggctagctgttacttgcagagtaatcaagcgcattctgcgtaccatattttaaaggga 273
Query: 181 acacaaatggctcaatcccggtacttgtttgcaatatcatgttttcagatggatcttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 acacaaatggctcaatcccggtacttgtttgcaatatcatgttttcagatggatcttctt 333
Query: 241 agtgaagctgaagcagcattatgtcctgtcaatgagcctagtgcagaggtcccaaatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agtgaagctgaagcagcattatgtcctgtcaatgagcctagtgcagaggtcccaaatggt 393
Query: 301 gcagctggtcatcatctattagggctcatttacagatatactgacagaaggagaagtgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gcagctggtcatcatctattagggctcatttacagatatactgacagaaggagaagtgcc 453
Query: 361 atacatcattttaagcaggcactattggtggatcctctaatgtgggcagcatatgaggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atacatcattttaagcaggcactattggtggatcctctaatgtgggcagcatatgaggag 513
Query: 421 ttgtgcatattaggcgctgctgaagaagctactgcagtttttggtgaagcagctgctctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttgtgcatattaggcgctgctgaagaagctactgcagtttttggtgaagcagctgctctt 573
Query: 481 tgtatacaaaagcaatacctaaattgctcaactactccaaagctgcattcatctactgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tgtatacaaaagcaatacctaaattgctcaactactccaaagctgcattcatctactgag 633
Query: 541 gattgtaatttggttgacactagacacagtgcatcagaagatgtgaatccaaggcaactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gattgtaatttggttgacactagacacagtgcatcagaagatgtgaatccaaggcaactg 693
Query: 601 aaactcatgcaaggcctaaaggatattcctctaaatcatcat 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 aaactcatgcaaggcctaaaggatattcctctaaatcatcat 735
>gnl|LJGI|DC595233 homologue to UniRef100_A6BL28 Cluster: Cdc27B; n=1; Nicotiana
tabacum|Rep: Cdc27B - Nicotiana tabacum (Common tobacco),
partial (20%)
Length = 454
Score = 119 bits (60), Expect = 5e-26
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1465 gctcgtcagattatgccatatagtttggaaggaatggacgtatactcaacagtcctttat 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctcgtcagattatgccatatagtttggaaggaatggacgtatactcaacagtcctttat 60
>gnl|LJGI|BP053302 similar to UniRef100_Q9SL81 Cluster: CDC27/NUC2-like protein; n=1;
Arabidopsis thaliana|Rep: CDC27/NUC2-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 432
Score = 65.9 bits (33), Expect = 7e-10
Identities = 87/105 (82%)
Strand = Plus / Minus
Query: 1420 tttgaattagtagattatttagaggctgatcgagcctttggtcttgctcgtcagattatg 1479
||||||||||| |||| | |||| ||||||| ||| || | ||||||||||||||||
Sbjct: 425 tttgaattagttgattttgtagaagctgatccagctttcagacttgctcgtcagattacc 366
Query: 1480 ccatatagtttggaaggaatggacgtatactcaacagtcctttat 1524
|| |||||||| ||||||||||| ||||||| || || ||||||
Sbjct: 365 ccttatagttttgaaggaatggatatatactccaccgttctttat 321