Miyakogusa Predicted Gene

Lj1g3v3022300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3022300.1 Non Characterized Hit- tr|I1EYB9|I1EYB9_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica
PE,28.42,3e-18,seg,NULL; Eukaryotic type KH-domain (KH-domain type
I),NULL; no description,NULL; SUBFAMILY NOT NAME,CUFF.29940.1
         (625 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g013700.1 | RS2-interacting KH protein, putative | HC | ch...   655   0.0  
Medtr7g013700.3 | RS2-interacting KH protein, putative | HC | ch...   572   e-163
Medtr7g013700.2 | RS2-interacting KH protein, putative | HC | ch...   571   e-162

>Medtr7g013700.1 | RS2-interacting KH protein, putative | HC |
           chr7:3966966-3978219 | 20130731
          Length = 627

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/530 (66%), Positives = 383/530 (72%), Gaps = 39/530 (7%)

Query: 92  IQDELVIAREIIINDAESSIRYKLTKCQTQEEIQRCTGTIVITRGKYRPPTAPPDGEKPL 151
           IQDELVIAREI+INDAESS+RYKLT+ QTQEEIQRCTGTIVITRGKYRPP +P DGEKPL
Sbjct: 102 IQDELVIAREIVINDAESSLRYKLTRRQTQEEIQRCTGTIVITRGKYRPPNSPLDGEKPL 161

Query: 152 YLHISAGAHIKETAERILVVDRAAAMIEEMLRQGQNSPSISTASPSALANGVTMPSACVF 211
           YLHISAGAHIK+TAERILVVDRAAAMIEEMLRQGQNS SIS+A PSALANGV + S CVF
Sbjct: 162 YLHISAGAHIKDTAERILVVDRAAAMIEEMLRQGQNSQSISSALPSALANGVKVLSTCVF 221

Query: 212 LGFDADPSLNIVARIRGPNDQYINHIMNETGVTVTLRGRGSGNDECMSGEDGQQPMHLFL 271
           LGFDADPS NIVARIRGPNDQYINHIMNETG TV LRGRGSGNDE  +GEDGQQPMHLFL
Sbjct: 222 LGFDADPSWNIVARIRGPNDQYINHIMNETGATVILRGRGSGNDEGSNGEDGQQPMHLFL 281

Query: 272 SSNNLKSLEDARCLAENLLDTISVECGASRVPSCKVYSAVPPPQQAYTAVPPPQQVYTAF 331
           SSNN KSLEDA+ LAENLLDTIS+ECGASR+ SCKVYSAVPPPQ  YTAVPPPQQVYTA 
Sbjct: 282 SSNNAKSLEDAKFLAENLLDTISMECGASRISSCKVYSAVPPPQPVYTAVPPPQQVYTAV 341

Query: 332 PPPQQVYNGPSLSKQISTAISPPQQVYRAVPPPQQLLAGVQSSGVELEGIAGLTTNSLSS 391
           P PQQVY+GPSLSKQISTAISP QQ Y AVPPPQQLLAGVQ S    E    +TT S+S 
Sbjct: 342 PSPQQVYSGPSLSKQISTAISPVQQGYSAVPPPQQLLAGVQCS----EASTDVTTTSMSL 397

Query: 392 NVAPTPVPPASLIGVPGVATTLMSATMSQSTGYLSSGPQANMIGYTLPSVXXXXXXXXXX 451
               TPV                              P ANMIGY  P V          
Sbjct: 398 TAVSTPV------------------------------PTANMIGYAPPLVSGGTSYIGYG 427

Query: 452 XXXPQATPMQQVALALRHXXXXXXXXXXXXXXXNGESKSTTSSNPEKE-RRQPQRRKFQE 510
              PQATP+QQVALALRH               N ESKSTT+SN EKE +R  QRRKFQE
Sbjct: 428 GIYPQATPLQQVALALRHSPPVASTVAPATSAPNRESKSTTNSNHEKEDKRTAQRRKFQE 487

Query: 511 LPVGSKSTTKLNQGLEPLRPNEQSDDLVLRNTSNMPAPRKLMQ--SNGMAXXXXXXXXXX 568
            PV SK   K NQG E L+PNE+ ++LV+RN S MPAP+KL+Q  SNG+           
Sbjct: 488 QPVVSKG-AKHNQGSELLKPNERYENLVVRNISTMPAPKKLVQPSSNGIP-APPPRTTPP 545

Query: 569 XXXXXXXXXXXXXXKFSDAPEVKVQDKSKNLLKTKSDAVPDTLIKLMEYG 618
                         KF D+ EVKVQDKS +L KTKSDA+PDTL+KLMEYG
Sbjct: 546 PPPKRAMPPPPPPPKFYDSIEVKVQDKSNSLRKTKSDAIPDTLVKLMEYG 595


>Medtr7g013700.3 | RS2-interacting KH protein, putative | HC |
           chr7:3966966-3978165 | 20130731
          Length = 521

 Score =  572 bits (1474), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 305/433 (70%), Positives = 322/433 (74%), Gaps = 36/433 (8%)

Query: 92  IQDELVIAREIIINDAESSIRYKLTKCQTQEEIQRCTGTIVITRGKYRPPTAPPDGEKPL 151
           IQDELVIAREI+INDAESS+RYKLT+ QTQEEIQRCTGTIVITRGKYRPP +P DGEKPL
Sbjct: 102 IQDELVIAREIVINDAESSLRYKLTRRQTQEEIQRCTGTIVITRGKYRPPNSPLDGEKPL 161

Query: 152 YLHISAGAHIKETAERILVVDRAAAMIEEMLRQGQNSPSISTASPSALANGVTMPSACVF 211
           YLHISAGAHIK+TAERILVVDRAAAMIEEMLRQGQNS SIS+A PSALANGV + S CVF
Sbjct: 162 YLHISAGAHIKDTAERILVVDRAAAMIEEMLRQGQNSQSISSALPSALANGVKVLSTCVF 221

Query: 212 LGFDADPSLNIVARIRGPNDQYINHIMNETGVTVTLRGRGSGNDECMSGEDGQQPMHLFL 271
           LGFDADPS NIVARIRGPNDQYINHIMNETG TV LRGRGSGNDE  +GEDGQQPMHLFL
Sbjct: 222 LGFDADPSWNIVARIRGPNDQYINHIMNETGATVILRGRGSGNDEGSNGEDGQQPMHLFL 281

Query: 272 SSNNLKSLEDARCLAENLLDTISVECGASRVPSCKVYSAVPPPQQAYTAVPPPQQVYTAF 331
           SSNN KSLEDA+ LAENLLDTIS+ECGASR+ SCKVYSAVPPPQ  YTAVPPPQQVYTA 
Sbjct: 282 SSNNAKSLEDAKFLAENLLDTISMECGASRISSCKVYSAVPPPQPVYTAVPPPQQVYTAV 341

Query: 332 PPPQQVYNGPSLSKQISTAISPPQQVYRAVPPPQQLLAGVQSSGVELEGIAGLTTNSLSS 391
           P PQQVY+GPSLSKQISTAISP QQ Y AVPPPQQLLAGVQ S    E    +TT S+S 
Sbjct: 342 PSPQQVYSGPSLSKQISTAISPVQQGYSAVPPPQQLLAGVQCS----EASTDVTTTSMSL 397

Query: 392 NVAPTPVPPASLIGVPGVATTLMSATMSQSTGYLSSGPQANMIGYTLPSVXXXXXXXXXX 451
               TPV                              P ANMIGY  P V          
Sbjct: 398 TAVSTPV------------------------------PTANMIGYAPPLVSGGTSYIGYG 427

Query: 452 XXXPQATPMQQVALALRHXXXXXXXXXXXXXXXNGESKSTTSSNPEKE-RRQPQRRKFQE 510
              PQATP+QQVALALRH               N ESKSTT+SN EKE +R  QRRKFQE
Sbjct: 428 GIYPQATPLQQVALALRHSPPVASTVAPATSAPNRESKSTTNSNHEKEDKRTAQRRKFQE 487

Query: 511 LPVGSKSTTKLNQ 523
            PV SK   K NQ
Sbjct: 488 QPVVSKG-AKHNQ 499


>Medtr7g013700.2 | RS2-interacting KH protein, putative | HC |
           chr7:3966966-3978219 | 20130731
          Length = 576

 Score =  571 bits (1471), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 305/433 (70%), Positives = 322/433 (74%), Gaps = 36/433 (8%)

Query: 92  IQDELVIAREIIINDAESSIRYKLTKCQTQEEIQRCTGTIVITRGKYRPPTAPPDGEKPL 151
           IQDELVIAREI+INDAESS+RYKLT+ QTQEEIQRCTGTIVITRGKYRPP +P DGEKPL
Sbjct: 102 IQDELVIAREIVINDAESSLRYKLTRRQTQEEIQRCTGTIVITRGKYRPPNSPLDGEKPL 161

Query: 152 YLHISAGAHIKETAERILVVDRAAAMIEEMLRQGQNSPSISTASPSALANGVTMPSACVF 211
           YLHISAGAHIK+TAERILVVDRAAAMIEEMLRQGQNS SIS+A PSALANGV + S CVF
Sbjct: 162 YLHISAGAHIKDTAERILVVDRAAAMIEEMLRQGQNSQSISSALPSALANGVKVLSTCVF 221

Query: 212 LGFDADPSLNIVARIRGPNDQYINHIMNETGVTVTLRGRGSGNDECMSGEDGQQPMHLFL 271
           LGFDADPS NIVARIRGPNDQYINHIMNETG TV LRGRGSGNDE  +GEDGQQPMHLFL
Sbjct: 222 LGFDADPSWNIVARIRGPNDQYINHIMNETGATVILRGRGSGNDEGSNGEDGQQPMHLFL 281

Query: 272 SSNNLKSLEDARCLAENLLDTISVECGASRVPSCKVYSAVPPPQQAYTAVPPPQQVYTAF 331
           SSNN KSLEDA+ LAENLLDTIS+ECGASR+ SCKVYSAVPPPQ  YTAVPPPQQVYTA 
Sbjct: 282 SSNNAKSLEDAKFLAENLLDTISMECGASRISSCKVYSAVPPPQPVYTAVPPPQQVYTAV 341

Query: 332 PPPQQVYNGPSLSKQISTAISPPQQVYRAVPPPQQLLAGVQSSGVELEGIAGLTTNSLSS 391
           P PQQVY+GPSLSKQISTAISP QQ Y AVPPPQQLLAGVQ S    E    +TT S+S 
Sbjct: 342 PSPQQVYSGPSLSKQISTAISPVQQGYSAVPPPQQLLAGVQCS----EASTDVTTTSMSL 397

Query: 392 NVAPTPVPPASLIGVPGVATTLMSATMSQSTGYLSSGPQANMIGYTLPSVXXXXXXXXXX 451
               TPV                              P ANMIGY  P V          
Sbjct: 398 TAVSTPV------------------------------PTANMIGYAPPLVSGGTSYIGYG 427

Query: 452 XXXPQATPMQQVALALRHXXXXXXXXXXXXXXXNGESKSTTSSNPEKE-RRQPQRRKFQE 510
              PQATP+QQVALALRH               N ESKSTT+SN EKE +R  QRRKFQE
Sbjct: 428 GIYPQATPLQQVALALRHSPPVASTVAPATSAPNRESKSTTNSNHEKEDKRTAQRRKFQE 487

Query: 511 LPVGSKSTTKLNQ 523
            PV SK   K NQ
Sbjct: 488 QPVVSKG-AKHNQ 499