Miyakogusa Predicted Gene

Lj1g3v2835950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2835950.1 Non Characterized Hit- tr|I1JEZ2|I1JEZ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28810
PE,83.14,0,SUBFAMILY NOT NAMED,NULL; NUCLEASE-RELATED,NULL;
eIF2A,Translation initiation factor 2A, beta propel,CUFF.29566.1
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g087280.1 | eukaryotic translation initiation factor eIF2A...   613   e-176
Medtr4g087280.2 | eukaryotic translation initiation factor eIF2A...   613   e-175
Medtr3g105430.1 | eukaryotic translation initiation factor 3 sub...    55   7e-08

>Medtr4g087280.1 | eukaryotic translation initiation factor
           eIF2A-like protein | HC | chr4:34234169-34228705 |
           20130731
          Length = 516

 Score =  613 bits (1582), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 283/344 (82%), Positives = 312/344 (90%)

Query: 1   MASDGQTPPLEILVRGPEEFSIWTGPPFANGQPGIKLEKVNCTSAKYSDDGSRLMVMKSN 60
           MASD  +P LEILVR PEE S+WTGPPF NGQP IKL+KV C +AK+SDDGS LMV+KSN
Sbjct: 1   MASDNNSPSLEILVRRPEECSLWTGPPFENGQPNIKLDKVICLNAKFSDDGSLLMVVKSN 60

Query: 61  SVISVYDCRTAKEVKSFEVPNVMAAILSPRGTYLQIFKKPSGPQDKNVALWKTETGDPVY 120
           SVI++YDC+TAKE++SF+VPN++A++LSPRGTYLQ F+KPSGPQDKNV LWK ETGD +Y
Sbjct: 61  SVITIYDCKTAKEIRSFQVPNLVASVLSPRGTYLQTFQKPSGPQDKNVTLWKIETGDSIY 120

Query: 121 QHSQKNLTKNNWPVIQFSSDEATACRLATNEVQFFDATDFSKGVIQRLRVPGVAAIELSS 180
           QHSQKN+T+ NWP IQFSSDEATACR+ TNEVQFFD  DFSKGV+ RLRVPGVA+ ELS 
Sbjct: 121 QHSQKNMTRANWPAIQFSSDEATACRVPTNEVQFFDTGDFSKGVVCRLRVPGVASAELSI 180

Query: 181 SPGSHIAAFVPESKGIPASVQIFACGDASQSQPIARRSFFRCSNAQLKWNHGSTGLLVVA 240
           SP SH+AAFVPESKG+PASVQIFACGDASQ+QP+ARRSFFRCS  QLKWNHGSTGLL+V 
Sbjct: 181 SPASHVAAFVPESKGVPASVQIFACGDASQTQPMARRSFFRCSTTQLKWNHGSTGLLIVV 240

Query: 241 QSDVDKTNQSYYGESKLYYLTTDGKHEGLVPLRKEGPIHDAHWSYSGLEFAVVYGFMPAK 300
           QSDVDKTNQSYYGESKLYYLTTDG HEGLVPLRKEGPIHDA WS SG EFAVVYGFMPAK
Sbjct: 241 QSDVDKTNQSYYGESKLYYLTTDGVHEGLVPLRKEGPIHDAQWSNSGSEFAVVYGFMPAK 300

Query: 301 ATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDMV 344
           ATLFDK C PLLELGTGPYNTIRWNPKG+FLCLAGFGNLPGDMV
Sbjct: 301 ATLFDKKCRPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMV 344


>Medtr4g087280.2 | eukaryotic translation initiation factor
           eIF2A-like protein | HC | chr4:34234038-34228705 |
           20130731
          Length = 504

 Score =  613 bits (1580), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 283/344 (82%), Positives = 312/344 (90%)

Query: 1   MASDGQTPPLEILVRGPEEFSIWTGPPFANGQPGIKLEKVNCTSAKYSDDGSRLMVMKSN 60
           MASD  +P LEILVR PEE S+WTGPPF NGQP IKL+KV C +AK+SDDGS LMV+KSN
Sbjct: 1   MASDNNSPSLEILVRRPEECSLWTGPPFENGQPNIKLDKVICLNAKFSDDGSLLMVVKSN 60

Query: 61  SVISVYDCRTAKEVKSFEVPNVMAAILSPRGTYLQIFKKPSGPQDKNVALWKTETGDPVY 120
           SVI++YDC+TAKE++SF+VPN++A++LSPRGTYLQ F+KPSGPQDKNV LWK ETGD +Y
Sbjct: 61  SVITIYDCKTAKEIRSFQVPNLVASVLSPRGTYLQTFQKPSGPQDKNVTLWKIETGDSIY 120

Query: 121 QHSQKNLTKNNWPVIQFSSDEATACRLATNEVQFFDATDFSKGVIQRLRVPGVAAIELSS 180
           QHSQKN+T+ NWP IQFSSDEATACR+ TNEVQFFD  DFSKGV+ RLRVPGVA+ ELS 
Sbjct: 121 QHSQKNMTRANWPAIQFSSDEATACRVPTNEVQFFDTGDFSKGVVCRLRVPGVASAELSI 180

Query: 181 SPGSHIAAFVPESKGIPASVQIFACGDASQSQPIARRSFFRCSNAQLKWNHGSTGLLVVA 240
           SP SH+AAFVPESKG+PASVQIFACGDASQ+QP+ARRSFFRCS  QLKWNHGSTGLL+V 
Sbjct: 181 SPASHVAAFVPESKGVPASVQIFACGDASQTQPMARRSFFRCSTTQLKWNHGSTGLLIVV 240

Query: 241 QSDVDKTNQSYYGESKLYYLTTDGKHEGLVPLRKEGPIHDAHWSYSGLEFAVVYGFMPAK 300
           QSDVDKTNQSYYGESKLYYLTTDG HEGLVPLRKEGPIHDA WS SG EFAVVYGFMPAK
Sbjct: 241 QSDVDKTNQSYYGESKLYYLTTDGVHEGLVPLRKEGPIHDAQWSNSGSEFAVVYGFMPAK 300

Query: 301 ATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDMV 344
           ATLFDK C PLLELGTGPYNTIRWNPKG+FLCLAGFGNLPGDMV
Sbjct: 301 ATLFDKKCRPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMV 344


>Medtr3g105430.1 | eukaryotic translation initiation factor 3
           subunit B | HC | chr3:48618144-48613776 | 20130731
          Length = 716

 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 114/291 (39%), Gaps = 35/291 (12%)

Query: 80  PNVMAAILSPRGTYLQIF--KKPSGPQDKN---VALWKTETG----------DPVYQHSQ 124
           P V     SP   YL  +   +PS P+D N   + ++   TG          D       
Sbjct: 253 PQVKLIDFSPGEKYLVTYSSHEPSNPRDANRVVINIFDVRTGKVMRDFKGSADDFAIGGT 312

Query: 125 KNLTKNNWPVIQFS--SDEATACRLATNEVQFFDATDFSKGVIQRLRVPGVAAIELSSSP 182
             +T  +WPV ++S   D+    R+  N +  ++   FS    + L+V  +  ++ S SP
Sbjct: 313 GGVTGVSWPVFKWSGGRDDKYFARMGKNVLSVYETETFSLVDKKSLKVENI--MDFSWSP 370

Query: 183 GS-HIAAFVPESKG--IPASVQIFACGDASQSQPIARRSFFRCSNAQLKWNHGSTGLLVV 239
               I+ FVPE+ G   PA V +         + + ++  F  S+ ++ W   +   L V
Sbjct: 371 TDPIISLFVPETGGGNQPARVSLVQI---PSKEELRQKLLFNVSDCKMYW-QSNGEYLAV 426

Query: 240 AQSDVDKTNQSYYGESKLYYLTT-DGKHEGLVPLRKEGPIHDAHWSYSGLEFAVVYGFMP 298
                 KT +S +   +L+ +   D   E L    K   I    W   G  FAV++G  P
Sbjct: 427 NVDRYTKTKKSTFTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNP 486

Query: 299 A--------KATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPG 341
                    +        + L  L     N + W+P GRF+ LAG     G
Sbjct: 487 KPDISIYSMRTAQNTGRVSKLTTLKGKQANALFWSPAGRFIVLAGLKGFNG 537