Miyakogusa Predicted Gene

Lj1g3v2835950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2835950.1 Non Chatacterized Hit- tr|I1JEZ2|I1JEZ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28810
PE,83.14,0,SUBFAMILY NOT NAMED,NULL; NUCLEASE-RELATED,NULL;
eIF2A,Translation initiation factor 2A, beta propel,CUFF.29566.1
         (349 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G73180.1 | Symbols:  | Eukaryotic translation initiation fact...   522   e-148
AT1G73180.2 | Symbols:  | Eukaryotic translation initiation fact...   521   e-148
AT5G27640.2 | Symbols: TIF3B1, EIF3B, ATEIF3B-1, EIF3B-1, ATTIF3...    54   1e-07
AT5G27640.1 | Symbols: TIF3B1, EIF3B, ATEIF3B-1, EIF3B-1, ATTIF3...    54   1e-07
AT5G25780.1 | Symbols: EIF3B-2, EIF3B, ATEIF3B-2 | eukaryotic tr...    54   1e-07

>AT1G73180.1 | Symbols:  | Eukaryotic translation initiation factor
           eIF2A family protein | chr1:27518335-27521432 FORWARD
           LENGTH=513
          Length = 513

 Score =  522 bits (1344), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 236/338 (69%), Positives = 278/338 (82%)

Query: 7   TPPLEILVRGPEEFSIWTGPPFANGQPGIKLEKVNCTSAKYSDDGSRLMVMKSNSVISVY 66
           +P LEILVR  E F++W GPPF NGQP +KLE+V+C++ K+S DGS+LM MKS+ VIS+Y
Sbjct: 4   SPSLEILVREAEGFTVWNGPPFTNGQPTLKLERVSCSNTKFSVDGSKLMAMKSDGVISIY 63

Query: 67  DCRTAKEVKSFEVPNVMAAILSPRGTYLQIFKKPSGPQDKNVALWKTETGDPVYQHSQKN 126
           D  +  EV+SF + NV AA LSP GTYLQ F+KP+ PQ+KNV++W TETGD  + H QK+
Sbjct: 64  DATSLTEVRSFTIANVTAAELSPCGTYLQTFQKPTTPQEKNVSIWNTETGDLAHSHYQKS 123

Query: 127 LTKNNWPVIQFSSDEATACRLATNEVQFFDATDFSKGVIQRLRVPGVAAIELSSSPGSHI 186
           +TK +WP I+F  DE++ACRLATNEVQFFD  DFSKG+  R+RVPG+AA ELS +P SH+
Sbjct: 124 ITKASWPSIRFCPDESSACRLATNEVQFFDPKDFSKGITSRIRVPGIAAFELSKTPASHV 183

Query: 187 AAFVPESKGIPASVQIFACGDASQSQPIARRSFFRCSNAQLKWNHGSTGLLVVAQSDVDK 246
           A FVPESKG P SVQIF CG+  QSQP ARRSFFRCS+ Q  WNHGSTGLLVV QSDVDK
Sbjct: 184 AVFVPESKGSPGSVQIFGCGEELQSQPSARRSFFRCSSVQFSWNHGSTGLLVVVQSDVDK 243

Query: 247 TNQSYYGESKLYYLTTDGKHEGLVPLRKEGPIHDAHWSYSGLEFAVVYGFMPAKATLFDK 306
           TNQSYYGE+KL+YLT DG HEGLVPLRKEGP+HD  WS+SG EFAVVYGFMPA  T+FDK
Sbjct: 244 TNQSYYGETKLHYLTIDGTHEGLVPLRKEGPVHDVQWSFSGSEFAVVYGFMPACVTIFDK 303

Query: 307 NCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDMV 344
           NC PL+ELG GPYNT+RWNPKGR LC+AGFGNLPGDM 
Sbjct: 304 NCKPLMELGEGPYNTLRWNPKGRVLCVAGFGNLPGDMA 341


>AT1G73180.2 | Symbols:  | Eukaryotic translation initiation factor
           eIF2A family protein | chr1:27518335-27521014 FORWARD
           LENGTH=484
          Length = 484

 Score =  521 bits (1342), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 236/337 (70%), Positives = 278/337 (82%)

Query: 7   TPPLEILVRGPEEFSIWTGPPFANGQPGIKLEKVNCTSAKYSDDGSRLMVMKSNSVISVY 66
           +P LEILVR  E F++W GPPF NGQP +KLE+V+C++ K+S DGS+LM MKS+ VIS+Y
Sbjct: 4   SPSLEILVREAEGFTVWNGPPFTNGQPTLKLERVSCSNTKFSVDGSKLMAMKSDGVISIY 63

Query: 67  DCRTAKEVKSFEVPNVMAAILSPRGTYLQIFKKPSGPQDKNVALWKTETGDPVYQHSQKN 126
           D  +  EV+SF + NV AA LSP GTYLQ F+KP+ PQ+KNV++W TETGD  + H QK+
Sbjct: 64  DATSLTEVRSFTIANVTAAELSPCGTYLQTFQKPTTPQEKNVSIWNTETGDLAHSHYQKS 123

Query: 127 LTKNNWPVIQFSSDEATACRLATNEVQFFDATDFSKGVIQRLRVPGVAAIELSSSPGSHI 186
           +TK +WP I+F  DE++ACRLATNEVQFFD  DFSKG+  R+RVPG+AA ELS +P SH+
Sbjct: 124 ITKASWPSIRFCPDESSACRLATNEVQFFDPKDFSKGITSRIRVPGIAAFELSKTPASHV 183

Query: 187 AAFVPESKGIPASVQIFACGDASQSQPIARRSFFRCSNAQLKWNHGSTGLLVVAQSDVDK 246
           A FVPESKG P SVQIF CG+  QSQP ARRSFFRCS+ Q  WNHGSTGLLVV QSDVDK
Sbjct: 184 AVFVPESKGSPGSVQIFGCGEELQSQPSARRSFFRCSSVQFSWNHGSTGLLVVVQSDVDK 243

Query: 247 TNQSYYGESKLYYLTTDGKHEGLVPLRKEGPIHDAHWSYSGLEFAVVYGFMPAKATLFDK 306
           TNQSYYGE+KL+YLT DG HEGLVPLRKEGP+HD  WS+SG EFAVVYGFMPA  T+FDK
Sbjct: 244 TNQSYYGETKLHYLTIDGTHEGLVPLRKEGPVHDVQWSFSGSEFAVVYGFMPACVTIFDK 303

Query: 307 NCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDM 343
           NC PL+ELG GPYNT+RWNPKGR LC+AGFGNLPGDM
Sbjct: 304 NCKPLMELGEGPYNTLRWNPKGRVLCVAGFGNLPGDM 340


>AT5G27640.2 | Symbols: TIF3B1, EIF3B, ATEIF3B-1, EIF3B-1, ATTIF3B1
           | translation initiation factor 3B1 |
           chr5:9781207-9784759 REVERSE LENGTH=738
          Length = 738

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 18/226 (7%)

Query: 131 NWPVIQFS--SDEATACRLATNEVQFFDATDFSKGVIQRLRVPGVAAIELSSSPGSHIAA 188
           +WPV +++   D+    +L+ N +  ++   FS    + ++V  V  I  S +  S ++ 
Sbjct: 342 SWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDNVVDICWSPT-DSILSL 400

Query: 189 FVPESKG--IPASVQIFACGDASQSQPIARRSFFRCSNAQLKWNHGSTGLLVVAQSDVDK 246
           FVPE  G   PA V +       +   + +++ F  S+ ++ W   S   L V      K
Sbjct: 401 FVPEQGGGNQPAKVALVQIPSKVE---LRQKNLFSVSDCKMYW-QSSGEYLAVKVDRYTK 456

Query: 247 TNQSYYGESKLYYLTT-DGKHEGLVPLRKEGPIHDAHWSYSGLEFAVVYG--------FM 297
           T +S Y   +L+ +   D   E L    K   I    W   G  FAV++G        F 
Sbjct: 457 TKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDQPRPDVSFY 516

Query: 298 PAKATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDM 343
             K        + L  L     N + W+P G+++ LAG     G +
Sbjct: 517 SMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQL 562


>AT5G27640.1 | Symbols: TIF3B1, EIF3B, ATEIF3B-1, EIF3B-1, ATTIF3B1
           | translation initiation factor 3B1 |
           chr5:9781207-9784759 REVERSE LENGTH=712
          Length = 712

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 18/226 (7%)

Query: 131 NWPVIQFS--SDEATACRLATNEVQFFDATDFSKGVIQRLRVPGVAAIELSSSPGSHIAA 188
           +WPV +++   D+    +L+ N +  ++   FS    + ++V  V  I  S +  S ++ 
Sbjct: 316 SWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDNVVDICWSPT-DSILSL 374

Query: 189 FVPESKG--IPASVQIFACGDASQSQPIARRSFFRCSNAQLKWNHGSTGLLVVAQSDVDK 246
           FVPE  G   PA V +       +   + +++ F  S+ ++ W   S   L V      K
Sbjct: 375 FVPEQGGGNQPAKVALVQIPSKVE---LRQKNLFSVSDCKMYW-QSSGEYLAVKVDRYTK 430

Query: 247 TNQSYYGESKLYYLTT-DGKHEGLVPLRKEGPIHDAHWSYSGLEFAVVYG--------FM 297
           T +S Y   +L+ +   D   E L    K   I    W   G  FAV++G        F 
Sbjct: 431 TKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDQPRPDVSFY 490

Query: 298 PAKATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDM 343
             K        + L  L     N + W+P G+++ LAG     G +
Sbjct: 491 SMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQL 536


>AT5G25780.1 | Symbols: EIF3B-2, EIF3B, ATEIF3B-2 | eukaryotic
           translation initiation factor 3B-2 |
           chr5:8973420-8976758 REVERSE LENGTH=714
          Length = 714

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 18/226 (7%)

Query: 131 NWPVIQFS--SDEATACRLATNEVQFFDATDFSKGVIQRLRVPGVAAIELSSSPGSHIAA 188
           +WPV +++   D+    +L+ N +  ++   FS    + ++V  V  I  S +  S ++ 
Sbjct: 317 SWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDNVVDICWSPT-DSILSL 375

Query: 189 FVPESKG--IPASVQIFACGDASQSQPIARRSFFRCSNAQLKWNHGSTGLLVVAQSDVDK 246
           FVPE  G   PA V +       +   + +++ F  S+ ++ W   S   L V      K
Sbjct: 376 FVPEQGGGNQPAKVALVQIPSKVE---LRQKNLFSVSDCKMYW-QSSGEYLAVKVDRYTK 431

Query: 247 TNQSYYGESKLYYLTT-DGKHEGLVPLRKEGPIHDAHWSYSGLEFAVVYG--------FM 297
           T +S Y   +L+ +   D   E L    K   I    W   G  FAV++G        F 
Sbjct: 432 TKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDQPRPDVSFY 491

Query: 298 PAKATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDM 343
             K        + L  L     N + W+P G+++ LAG     G +
Sbjct: 492 SMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQL 537