Miyakogusa Predicted Gene
- Lj1g3v2835950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2835950.1 Non Chatacterized Hit- tr|I1JEZ2|I1JEZ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28810
PE,83.14,0,SUBFAMILY NOT NAMED,NULL; NUCLEASE-RELATED,NULL;
eIF2A,Translation initiation factor 2A, beta propel,CUFF.29566.1
(1050 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59246 weakly similar to UniRef100_A7QAR8 Cluster: Chr... 1134 0.0
gnl|LJGI|TC79717 similar to UniRef100_A7QAR8 Cluster: Chromosome... 940 0.0
gnl|LJGI|AU089136 similar to UniRef100_A7QAR8 Cluster: Chromosom... 226 2e-58
>gnl|LJGI|TC59246 weakly similar to UniRef100_A7QAR8 Cluster: Chromosome chr5
scaffold_72, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_72, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 776
Score = 1134 bits (572), Expect = 0.0
Identities = 572/572 (100%)
Strand = Plus / Plus
Query: 1 atggcatcagatggccaaacaccgcctctcgagatattagttcgagggccggaagaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 atggcatcagatggccaaacaccgcctctcgagatattagttcgagggccggaagaattc 264
Query: 61 tcaatctggactggacccccgtttgccaatggtcaacctggtatcaagcttgaaaaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaatctggactggacccccgtttgccaatggtcaacctggtatcaagcttgaaaaggtt 324
Query: 121 aattgtacgagtgcgaaatatagtgatgatggatctcggcttatggtgatgaaatccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aattgtacgagtgcgaaatatagtgatgatggatctcggcttatggtgatgaaatccaac 384
Query: 181 tctgtgattagtgtgtatgattgtagaactgctaaagaggtaaagtcttttgaagtacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctgtgattagtgtgtatgattgtagaactgctaaagaggtaaagtcttttgaagtacct 444
Query: 241 aatgttatggctgctatcctgtcaccacgcgggacttatttgcaaatcttcaaaaaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatgttatggctgctatcctgtcaccacgcgggacttatttgcaaatcttcaaaaaacct 504
Query: 301 tcggggccccaagataagaatgtggcactctggaagacggagactggtgaccctgtttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcggggccccaagataagaatgtggcactctggaagacggagactggtgaccctgtttat 564
Query: 361 caacactcccaaaagaacttgacaaaaaacaattggcctgtgattcaattcagctctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caacactcccaaaagaacttgacaaaaaacaattggcctgtgattcaattcagctctgat 624
Query: 421 gaagctactgcgtgccggttggcaactaatgaggtgcaattttttgatgccacggacttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaagctactgcgtgccggttggcaactaatgaggtgcaattttttgatgccacggacttc 684
Query: 481 tctaaaggagttatccaacggttaagagttccaggagttgctgccattgagctctctagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tctaaaggagttatccaacggttaagagttccaggagttgctgccattgagctctctagt 744
Query: 541 tcacccgggtctcatatagctgcatttgttcc 572
||||||||||||||||||||||||||||||||
Sbjct: 745 tcacccgggtctcatatagctgcatttgttcc 776
>gnl|LJGI|TC79717 similar to UniRef100_A7QAR8 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 1312
Score = 940 bits (474), Expect = 0.0
Identities = 474/474 (100%)
Strand = Plus / Plus
Query: 558 agctgcatttgttccagaatccaagggaattcctgctagtgtgcagatatttgcttgtgg 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agctgcatttgttccagaatccaagggaattcctgctagtgtgcagatatttgcttgtgg 61
Query: 618 agatgcttctcaaagccaacctattgctcggaggagttttttccgatgttccaacgccca 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agatgcttctcaaagccaacctattgctcggaggagttttttccgatgttccaacgccca 121
Query: 678 actcaaatggaatcatggttcaactgggcttctagtggtggcgcagtcggacgttgacaa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 actcaaatggaatcatggttcaactgggcttctagtggtggcgcagtcggacgttgacaa 181
Query: 738 aactaatcagagttattatggagaatcaaagttatactacctgacaacagatgggaagca 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aactaatcagagttattatggagaatcaaagttatactacctgacaacagatgggaagca 241
Query: 798 tgaaggacttgttcctcttcgaaaagaagggcctattcatgatgctcactggtcatattc 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgaaggacttgttcctcttcgaaaagaagggcctattcatgatgctcactggtcatattc 301
Query: 858 tggcttggaatttgccgttgtatatggctttatgcctgctaaagcaactctgtttgacaa 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tggcttggaatttgccgttgtatatggctttatgcctgctaaagcaactctgtttgacaa 361
Query: 918 gaactgcaatcctctactggagcttggaactggtccttacaatactattcgatggaatcc 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaactgcaatcctctactggagcttggaactggtccttacaatactattcgatggaatcc 421
Query: 978 aaagggaagatttttatgtttggctggctttggtaacttacctggtgacatggt 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaagggaagatttttatgtttggctggctttggtaacttacctggtgacatggt 475
>gnl|LJGI|AU089136 similar to UniRef100_A7QAR8 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 334
Score = 226 bits (114), Expect = 2e-58
Identities = 131/136 (96%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 887 ttatgcctgctaaagcaactctgtttgacaagaactgcaatcctctactggagcttggaa 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ttatgcctgctaaagcaactctgtttgacaagaactgcaatcctctactggagcttggaa 191
Query: 947 ctggtccttacaatactattcgatggaatccaaagggaagatttttatgtttggctggc- 1005
|||||||||||||||||||||||||||||||| |||||| || ||||||| ||||||||
Sbjct: 192 ctggtccttacaatactattcgatggaatccatagggaatatntttatgtntggctggct 251
Query: 1006 tttggtaacttacctg 1021
||||||||||||||||
Sbjct: 252 tttggtaacttacctg 267