Miyakogusa Predicted Gene

Lj1g3v2582270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2582270.1 Non Characterized Hit- tr|B4F8U9|B4F8U9_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,33.64,0.000000000000003,seg,NULL; SUBFAMILY NOT NAMED,NULL;
TSC22,TSC-22 / Dip / Bun; coiled-coil,NULL,CUFF.29220.1
         (605 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g075140.1 | smad/FHA domain protein | HC | chr7:28200108-2...   779   0.0  

>Medtr7g075140.1 | smad/FHA domain protein | HC |
           chr7:28200108-28191574 | 20130731
          Length = 897

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/607 (69%), Positives = 470/607 (77%), Gaps = 22/607 (3%)

Query: 1   MVDLKQKELEDINRASAELKHSLEDLNGRLSASMQSCAEANVLISSQMANIAELKEQLDX 60
           MVDLKQKE+ D+NRA AE KH+LEDLN RLSASMQSCAE+N LISSQ  NI ELKEQLD 
Sbjct: 280 MVDLKQKEVGDVNRAFAEQKHNLEDLNERLSASMQSCAESNELISSQKVNIVELKEQLDE 339

Query: 61  XXXXXXXXXXXXXXXXXXXVNKAQSEAQEELKKLSDTSLRRERELQEAINKLQESEREKC 120
                              V++ QSEAQEE+K+LSD +L+RE ELQEAINKL+ESERE C
Sbjct: 340 ERTQRKEEREKAAADLKAAVHRVQSEAQEEIKRLSDAALKREGELQEAINKLKESEREMC 399

Query: 121 SLVETLRPKLEDTRQKLVVSDNKVRQLEAQVHQEKLNTENGMKKVEELEQETRRLRKELE 180
            LVETLR KLEDTRQKLVVSDNK RQLE QVH EK NTENGMKKVEELEQETRRLRKELE
Sbjct: 400 VLVETLRSKLEDTRQKLVVSDNKGRQLETQVHLEKQNTENGMKKVEELEQETRRLRKELE 459

Query: 181 SEKQAARDEAWAKVSVLELEINAAMRDLDFERQRLKGAREKLMLRETQLRAFYSTTEEIQ 240
           SEK AAR+EAWAKVS+LELEINAAMRDLDFER+RLKGARE+LMLRETQLR+FYSTTEEIQ
Sbjct: 460 SEK-AAREEAWAKVSILELEINAAMRDLDFERRRLKGARERLMLRETQLRSFYSTTEEIQ 518

Query: 241 GLFAKQQEQLKAMQRTLEDDENYENTSIDMDGVIGGTSGREKEVAGYHSKNVAKAGSAT- 299
            LFAKQQEQLKAMQRTLEDDENY+N S+DMDGV+GGTSGREKE   YHS N AKAGS T 
Sbjct: 519 SLFAKQQEQLKAMQRTLEDDENYDNNSVDMDGVVGGTSGREKEGVVYHSNNAAKAGSTTS 578

Query: 300 AQKLSRDQVETSSHEASITEKHDCDIRSQEC-------QNTQEAEFTSADHDHGTRGGCG 352
           AQKL+RDQVETSS+EAS+TEKHDCDIRS+ C       QNTQEAEFTSADHDHG R   G
Sbjct: 579 AQKLNRDQVETSSNEASVTEKHDCDIRSEGCQNTQEAIQNTQEAEFTSADHDHGVRDCVG 638

Query: 353 SDTDCVDTTALVEGDAVGTERVLETESPTNYGERNFDLNG-GPLDGDTMQLEDEINVQ-- 409
           SD D V TTA++EGD VGTERVLETESP+N GERNFDLN  GPL+GDTM+++D++  +  
Sbjct: 639 SDVDGVGTTAMMEGDTVGTERVLETESPSNNGERNFDLNKDGPLEGDTMKIDDDMETEKL 698

Query: 410 -----ETEKHVQMPCPEVSQHSQSNIHVDTEKTIEDTEAGG-TIRTADLITSEVVGSWAC 463
                ETEK+ ++PC E+SQHSQSN H+DT+KTIE  EAG   IRT DLITSEV  SWAC
Sbjct: 699 DQIPMETEKNDRIPCRELSQHSQSNNHIDTQKTIEGAEAGCLLIRTEDLITSEVAASWAC 758

Query: 464 STAPSVHGENE-SPNKDNNEGSGALHDSNILVAESQNTPXXXXXXXXXERQALSEMIGIV 522
           STAPS+H ENE S ++DNNEGSG L+DSNI+VAES NTP         ER+ALSEMIGIV
Sbjct: 759 STAPSLHEENEPSKSRDNNEGSGTLNDSNIVVAESPNTPSDAAAARKNERRALSEMIGIV 818

Query: 523 APDLREQFGGSAYXXXXXXXXXXXXXXXXXXXXXXXXGDDRANVKVGS-ISDEETQVSDN 581
           APDL+EQF  +A                         G  R   K GS ISDEETQ  D+
Sbjct: 819 APDLKEQFEDAACRGGEDHSGSSDSDTESCSDTGDEDG--RVITKRGSIISDEETQGVDH 876

Query: 582 VEEDQKQ 588
           VEEDQKQ
Sbjct: 877 VEEDQKQ 883