Miyakogusa Predicted Gene
- Lj1g3v2582270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2582270.1 Non Chatacterized Hit- tr|B4F8U9|B4F8U9_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,33.64,0.000000000000003,seg,NULL; SUBFAMILY NOT NAMED,NULL;
TSC22,TSC-22 / Dip / Bun; coiled-coil,NULL,CUFF.29220.1
(1818 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP053491 similar to UniRef100_A7PYA8 Cluster: Chromosom... 379 e-104
gnl|LJGI|BW598903 weakly similar to UniRef100_A7PYA8 Cluster: Ch... 230 2e-59
gnl|LJGI|TC65799 56 8e-07
>gnl|LJGI|BP053491 similar to UniRef100_A7PYA8 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 315
Score = 379 bits (191), Expect = e-104
Identities = 283/307 (92%), Gaps = 5/307 (1%)
Strand = Plus / Minus
Query: 1517 ctgcccgaagggatgaacgacaagcactgagtgagatgattggcattgttgcgcctgatt 1576
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 315 ctgcccgaagggatgaacgacaagcactgagtgagatgattggcattcttgcgcctgatt 256
Query: 1577 tgagggagcaatttggaggttctgcatatgatcgtgat-caagaccgaaaagacca-gag 1634
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 255 tgagggagcaatttggaggttctgcatatgatcgtgatccaagaccgcaaagaccacgag 196
Query: 1635 tgattcatctaactcagatactgaaagctgtagcaacactgatggtgatgacagagctaa 1694
|||||||| | ||||||||||||||| || |||| |||||||||||||||||||||||||
Sbjct: 195 tgattcatatgactcagatactgaaacctctagcgacactgatggtgatgacagagctaa 136
Query: 1695 tgtaaaggttggatc-aatatctgatgaagaa-actcaggtcagcgacaatgt-cgagga 1751
|||||| ||||||| | |||||||||||||| |||||||||| |||| || | ||||||
Sbjct: 135 cgtaaagcttggatctactatctgatgaagaacactcaggtcaccgacgatttccgagga 76
Query: 1752 ggatcaaaagcaggatgatgccatggaagaagatgatgaagacactcaagaagattcata 1811
||||| || ||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 75 ggatcctaatcaggatgattccatggaagaagatgatgaagacacttcagaagattcata 16
Query: 1812 ttcttag 1818
|||||||
Sbjct: 15 ttcttag 9
>gnl|LJGI|BW598903 weakly similar to UniRef100_A7PYA8 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 460
Score = 230 bits (116), Expect = 2e-59
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 1 atggtggatctcaaacagaaagaactagaagatatcaacagggcatctgctgaattaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atggtggatctcaaacagaaagaactagaagatatcaacagggcatctgctgaattaaaa 404
Query: 61 cattccctggaagatctgaatggaaggcttagtgcttctatgcagtcatgtgctga 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cattccctggaagatctgaatggaaggcttagtgcttctatgcagtcatgtgctga 460
>gnl|LJGI|TC65799
Length = 1227
Score = 56.0 bits (28), Expect = 8e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 136 agtcaaatggcaaatatagctgaactcaaggaacaattagatgaagag 183
||||||||| ||||||||||| ||||||||||| | ||||||| ||||
Sbjct: 892 agtcaaatgtcaaatatagcttaactcaaggaaaatttagatggagag 939