Miyakogusa Predicted Gene

Lj1g3v2512700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2512700.1 tr|D7KQE3|D7KQE3_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_679051
PE,64.06,9e-17,seg,NULL,CUFF.29085.1
         (227 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g44750.1                                                       378   e-105
Glyma09g41260.1                                                       289   2e-78
Glyma19g22390.1                                                        66   2e-11

>Glyma18g44750.1 
          Length = 224

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 176/200 (88%), Positives = 191/200 (95%)

Query: 28  IALAYKPGDVVPMSRMGQYHSSRTVWQDLIGRHCPIFAVNREVLMPLPKPTGYTGADPYK 87
           IA+AY+PGD+VPMSRMGQYHS+RTVWQDLIGRHCPIFAVNREVLMP+PKPTGYTGAD YK
Sbjct: 25  IAVAYRPGDIVPMSRMGQYHSARTVWQDLIGRHCPIFAVNREVLMPIPKPTGYTGADAYK 84

Query: 88  ISFQVGREKFFVPWLLVVNRKSTEVPLIEVDLRYSGSDFHGVTAKVVDMPHHYVEIHPEI 147
           +SFQVGREKF +PWLLVVNRKSTEVP+IEVDL YSGSD HGVTAKVVDMPHH VE+HPEI
Sbjct: 85  MSFQVGREKFLIPWLLVVNRKSTEVPMIEVDLGYSGSDLHGVTAKVVDMPHHCVEVHPEI 144

Query: 148 RKQFWDAEHWPKHILVRYTWKEHSEIDVTSGFYVLFGSGLMLSFILSIYILQSSRDKLER 207
           RKQFWD++HWPKHILVRYTWKEHSEIDVTSGF+VLFGSGLMLSFILSIY+LQSSRDKLER
Sbjct: 145 RKQFWDSQHWPKHILVRYTWKEHSEIDVTSGFFVLFGSGLMLSFILSIYVLQSSRDKLER 204

Query: 208 FVRETVAESNVPIGEIAKVE 227
           FVRETV ES+VP   +AKVE
Sbjct: 205 FVRETVVESSVPGEVVAKVE 224


>Glyma09g41260.1 
          Length = 171

 Score =  289 bits (739), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 131/147 (89%), Positives = 141/147 (95%)

Query: 28  IALAYKPGDVVPMSRMGQYHSSRTVWQDLIGRHCPIFAVNREVLMPLPKPTGYTGADPYK 87
           IA+AY+PGD+VPMS MGQYHSSRTVWQDLIGRHCPIFAVNREVLMP+PKPTGYTGAD YK
Sbjct: 25  IAVAYRPGDIVPMSCMGQYHSSRTVWQDLIGRHCPIFAVNREVLMPIPKPTGYTGADAYK 84

Query: 88  ISFQVGREKFFVPWLLVVNRKSTEVPLIEVDLRYSGSDFHGVTAKVVDMPHHYVEIHPEI 147
           I FQVGREKF +PWLLVVNRKSTEVP+IEVDLRYSG+D HGVTAKVVDMPHHYVE+HPEI
Sbjct: 85  ILFQVGREKFLIPWLLVVNRKSTEVPMIEVDLRYSGNDLHGVTAKVVDMPHHYVEVHPEI 144

Query: 148 RKQFWDAEHWPKHILVRYTWKEHSEID 174
            KQFWD++HWPKHILVRYTWKEHSEID
Sbjct: 145 SKQFWDSQHWPKHILVRYTWKEHSEID 171


>Glyma19g22390.1 
          Length = 159

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 1/54 (1%)

Query: 28  IALAYKPGDVVPMSRMGQYHSSRTVWQDLIGRHCPIFAVNREVLMPLPKPTGYT 81
           I +AY+P ++V MS MGQYHS RTVWQDLIG H PIF VNRE ++   K   Y+
Sbjct: 53  IVVAYRPDNIVSMSCMGQYHS-RTVWQDLIGHHYPIFVVNREFIIRQFKMKNYS 105