Miyakogusa Predicted Gene

Lj1g3v2512700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2512700.1 tr|D7KQE3|D7KQE3_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_679051
PE,64.06,9e-17,seg,NULL,CUFF.29085.1
         (227 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51610.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   319   1e-87

>AT3G51610.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: response to
           oxidative stress; LOCATED IN: endomembrane system;
           EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
           growth stages; Has 53 Blast hits to 53 proteins in 21
           species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
           0; Plants - 48; Viruses - 0; Other Eukaryotes - 5
           (source: NCBI BLink). | chr3:19139715-19141986 REVERSE
           LENGTH=230
          Length = 230

 Score =  319 bits (817), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 144/199 (72%), Positives = 171/199 (85%), Gaps = 1/199 (0%)

Query: 28  IALAYKPGDVVPMSRMGQYHSSRTVWQDLIGRHCPIFAVNREVLMPLPKPTGYTGADPYK 87
           ++ AY+PGD+V MS+MGQYHSSRT W D+IG+HCPIFAVNREVL+P+ KP GYTG DPYK
Sbjct: 30  LSSAYRPGDIVRMSKMGQYHSSRTTWHDVIGKHCPIFAVNREVLIPIAKPIGYTGTDPYK 89

Query: 88  ISFQVGREKFFVPWLLVVNRKSTEVPLIEVDLRYSGSDFHGVTAKVVDMPHHYVEIHPEI 147
           I FQVG EKF + WLLV+NRKS+EVP+I+V+LRYSG D  GVTA+V+DMPH Y+  HPEI
Sbjct: 90  IKFQVGSEKFLIHWLLVINRKSSEVPMIDVNLRYSGGDLLGVTAQVIDMPHSYLNTHPEI 149

Query: 148 RKQFWDAEHWPKHILVRYTWKEHSEIDVTSGFYVLFGSGLMLSFILSIYILQSSRDKLER 207
           RKQFWD +HWPKH+LVRYTWKE SEIDV+SGFYVLFGS L  SF+LSIY+LQSSR+KL R
Sbjct: 150 RKQFWDPQHWPKHVLVRYTWKEQSEIDVSSGFYVLFGSALTFSFVLSIYVLQSSREKLAR 209

Query: 208 FVRETVAE-SNVPIGEIAK 225
           FVRETV E S++ +GE  K
Sbjct: 210 FVRETVVESSSMNVGEFGK 228