Miyakogusa Predicted Gene

Lj1g3v2512700.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2512700.1 tr|D7KQE3|D7KQE3_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_679051
PE,64.06,9e-17,seg,NULL,CUFF.29085.1
         (684 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73489 similar to UniRef100_A7QFM5 Cluster: Chromosome...  1356   0.0  
gnl|LJGI|BP069569 similar to UniRef100_A7QFM5 Cluster: Chromosom...   414   e-115

>gnl|LJGI|TC73489 similar to UniRef100_A7QFM5 Cluster: Chromosome chr8 scaffold_88,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_88, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (98%)
          Length = 1178

 Score = 1356 bits (684), Expect = 0.0
 Identities = 684/684 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcagccaccgtgaaaccgcttctctcgccgccgccgctgttgctgctactcctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atggcttcagccaccgtgaaaccgcttctctcgccgccgccgctgttgctgctactcctc 119

                                                                       
Query: 61  cttcttccgtcgcttctccccatcgctctcgcttacaaacccggcgacgtcgttcccatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cttcttccgtcgcttctccccatcgctctcgcttacaaacccggcgacgtcgttcccatg 179

                                                                       
Query: 121 agccgcatgggtcaataccactcctcgagaaccgtgtggcaggacctcattggccgccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agccgcatgggtcaataccactcctcgagaaccgtgtggcaggacctcattggccgccat 239

                                                                       
Query: 181 tgccccatcttcgcagtgaatcgtgaggtgttgatgcccttacccaagcccacaggttac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgccccatcttcgcagtgaatcgtgaggtgttgatgcccttacccaagcccacaggttac 299

                                                                       
Query: 241 actggtgctgatccgtataaaatatcatttcaagttggacgggagaaatttttcgtccca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 actggtgctgatccgtataaaatatcatttcaagttggacgggagaaatttttcgtccca 359

                                                                       
Query: 301 tggcttctagtggtaaatcggaaaagtacagaggttcccttgattgaagttgatctgagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggcttctagtggtaaatcggaaaagtacagaggttcccttgattgaagttgatctgagg 419

                                                                       
Query: 361 tattcaggaagtgattttcatggtgtcacagcaaaagttgtggatatgcctcatcactat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tattcaggaagtgattttcatggtgtcacagcaaaagttgtggatatgcctcatcactat 479

                                                                       
Query: 421 gttgaaattcatcctgagattcgtaaacaattctgggatgccgagcattggccaaagcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gttgaaattcatcctgagattcgtaaacaattctgggatgccgagcattggccaaagcat 539

                                                                       
Query: 481 atacttgtgcgatatacatggaaggagcattcagaaatagatgtaacttcaggattttat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atacttgtgcgatatacatggaaggagcattcagaaatagatgtaacttcaggattttat 599

                                                                       
Query: 541 gttctgttcggttcagggctgatgttgtctttcatcctctcaatctacattctgcaatca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gttctgttcggttcagggctgatgttgtctttcatcctctcaatctacattctgcaatca 659

                                                                       
Query: 601 tcccgggacaaattggaaagatttgtaagggaaacggttgcagaaagcaacgtgcctatt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tcccgggacaaattggaaagatttgtaagggaaacggttgcagaaagcaacgtgcctatt 719

                                   
Query: 661 ggagagatagcaaaggttgaatga 684
           ||||||||||||||||||||||||
Sbjct: 720 ggagagatagcaaaggttgaatga 743


>gnl|LJGI|BP069569 similar to UniRef100_A7QFM5 Cluster: Chromosome chr8 scaffold_88,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_88, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (33%)
          Length = 492

 Score =  414 bits (209), Expect = e-115
 Identities = 214/216 (99%)
 Strand = Plus / Minus

                                                                       
Query: 469 tggccaaagcatatacttgtgcgatatacatggaaggagcattcagaaatagatgtaact 528
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tggccaaagcatatacttgtgcgatatacatggaaggagcattcagaaatagatgtaact 433

                                                                       
Query: 529 tcaggattttatgttctgttcggttcagggctgatgttgtctttcatcctctcaatctac 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tcaggattttatgttctgttcggttcagggctgatgttgtctttcatcctctcaatctac 373

                                                                       
Query: 589 attctgcaatcatcccgggacaaattggaaagatttgtaagggaaacggttgcagaaagc 648
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 attctgcaatcatcccgggacaaattggaaagatttgtaagggaaacggttgcagaaagc 313

                                               
Query: 649 aacgtgcctattggagagatagcaaaggttgaatga 684
            |||||||||||||||||||||| ||||||||||||
Sbjct: 312 nacgtgcctattggagagatagccaaggttgaatga 277