Miyakogusa Predicted Gene

Lj1g3v2446010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2446010.1 Non Chatacterized Hit- tr|B6TFZ3|B6TFZ3_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2 SV=1,41.98,3e-19,no
description,Helix-loop-helix domain; coiled-coil,NULL,CUFF.29025.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g41470.1                                                       236   6e-63
Glyma18g44280.1                                                       220   4e-58
Glyma03g04970.1                                                       207   4e-54
Glyma01g32130.1                                                       204   4e-53
Glyma01g32130.2                                                       175   1e-44
Glyma02g42780.1                                                       170   5e-43
Glyma14g05870.1                                                       169   1e-42
Glyma11g35850.1                                                       156   7e-39
Glyma18g02560.1                                                       155   1e-38
Glyma01g32130.3                                                       150   5e-37
Glyma14g38130.1                                                       120   5e-28
Glyma11g29830.1                                                       119   2e-27
Glyma02g39960.1                                                       112   2e-25
Glyma11g29830.2                                                       108   3e-24
Glyma18g06270.1                                                       103   8e-23
Glyma05g29300.1                                                        58   4e-09
Glyma08g12450.1                                                        52   2e-07

>Glyma09g41470.1 
          Length = 152

 Score =  236 bits (603), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 118/150 (78%), Positives = 131/150 (87%), Gaps = 1/150 (0%)

Query: 2   GSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTESST 61
            SRE+RR +L+ TLQQLRD TNS+A+NKASII DASKYIEELKQKVE LNSEL + ESST
Sbjct: 3   ASREKRRASLEETLQQLRDVTNSTALNKASIIVDASKYIEELKQKVEGLNSELEIAESST 62

Query: 62  T-QIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQL 120
           T QIDELPMV VKTL+KGFLI VLLEK+CPGMLVSILEAFEEL LDV+DAR SCED+FQL
Sbjct: 63  TTQIDELPMVIVKTLKKGFLINVLLEKNCPGMLVSILEAFEELGLDVLDARVSCEDSFQL 122

Query: 121 ETVARESHKKHSVNAHVVKEAVLQAIRNTD 150
           E V RESHK  SV+A VVK+AVLQAI+N D
Sbjct: 123 EAVGRESHKNDSVDAQVVKQAVLQAIKNAD 152


>Glyma18g44280.1 
          Length = 165

 Score =  220 bits (561), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 108/140 (77%), Positives = 123/140 (87%)

Query: 3   SRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTESSTT 62
           SRE++R +L+ TLQQLRD TNSSA+NKASII DASKYIE+LKQKVE LNSELG+ +SST+
Sbjct: 5   SREKKRESLEDTLQQLRDVTNSSALNKASIIVDASKYIEKLKQKVEGLNSELGIADSSTS 64

Query: 63  QIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQLET 122
           QIDELPMV VKTL+KGFLI VLLEK+ PGMLVSILE FEEL LDV+DAR SCED+FQLE 
Sbjct: 65  QIDELPMVVVKTLKKGFLINVLLEKNFPGMLVSILETFEELGLDVLDARVSCEDSFQLEA 124

Query: 123 VARESHKKHSVNAHVVKEAV 142
           V RESHK  SV+A VVK+AV
Sbjct: 125 VGRESHKNDSVDAQVVKQAV 144


>Glyma03g04970.1 
          Length = 150

 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/151 (68%), Positives = 123/151 (81%), Gaps = 2/151 (1%)

Query: 1   MGSRER-RRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTES 59
           M SR R ++ A+Q  LQQLR  TNSSAVNKASII DA++YIEELKQKV+ LNSELG  ES
Sbjct: 1   MDSRRRSKKAAMQRKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVDGLNSELGTAES 60

Query: 60  STTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQ 119
           S +Q DELPMV+V+TLE+GFLI V  E++CPGML +IL+AFEEL LDV+DAR SCEDTFQ
Sbjct: 61  SISQ-DELPMVTVETLERGFLINVFSERNCPGMLAAILDAFEELGLDVLDARVSCEDTFQ 119

Query: 120 LETVARESHKKHSVNAHVVKEAVLQAIRNTD 150
           LE V  ES +  S++A VVK+AVLQAI+N D
Sbjct: 120 LEAVGGESQENESIDAQVVKQAVLQAIQNMD 150


>Glyma01g32130.1 
          Length = 150

 Score =  204 bits (518), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 102/151 (67%), Positives = 122/151 (80%), Gaps = 2/151 (1%)

Query: 1   MGSRER-RRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTES 59
           M SR R +  ++Q  LQQLR  TNSSAVNKASII DA++YIEELKQKV+ LNSELG  ES
Sbjct: 1   MDSRRRGKNASMQRKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVDGLNSELGTAES 60

Query: 60  STTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQ 119
           S +Q DELPMV+V+TLE+GFLI V  E++CPGML +IL+AFEEL LDV+DAR SCEDTFQ
Sbjct: 61  SISQ-DELPMVTVETLERGFLINVFSERNCPGMLGAILDAFEELGLDVLDARVSCEDTFQ 119

Query: 120 LETVARESHKKHSVNAHVVKEAVLQAIRNTD 150
           LE V  ES +  S++A VVK+AVLQAI+N D
Sbjct: 120 LEAVGGESQENESIDAQVVKQAVLQAIQNMD 150


>Glyma01g32130.2 
          Length = 136

 Score =  175 bits (444), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/127 (69%), Positives = 103/127 (81%), Gaps = 2/127 (1%)

Query: 1   MGSRER-RRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTES 59
           M SR R +  ++Q  LQQLR  TNSSAVNKASII DA++YIEELKQKV+ LNSELG  ES
Sbjct: 1   MDSRRRGKNASMQRKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVDGLNSELGTAES 60

Query: 60  STTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQ 119
           S +Q DELPMV+V+TLE+GFLI V  E++CPGML +IL+AFEEL LDV+DAR SCEDTFQ
Sbjct: 61  SISQ-DELPMVTVETLERGFLINVFSERNCPGMLGAILDAFEELGLDVLDARVSCEDTFQ 119

Query: 120 LETVARE 126
           LE V  E
Sbjct: 120 LEAVGGE 126


>Glyma02g42780.1 
          Length = 156

 Score =  170 bits (430), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 110/148 (74%), Gaps = 1/148 (0%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTESS 60
           M S+E++R AL   LQ LR  TNS A+NK SII DASKYIE+LKQKVE LN E+   E+S
Sbjct: 1   MVSKEQKRAALHEKLQNLRSITNSHALNKTSIIVDASKYIEKLKQKVERLNQEIASAETS 60

Query: 61  TTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQL 120
           +   + LPMV+V+TLEKGFLI V   K C G+LVSILEAFEE++L V++AR SC DTF+ 
Sbjct: 61  SVH-NPLPMVTVETLEKGFLINVFSAKGCSGLLVSILEAFEEMRLTVLEARVSCTDTFRF 119

Query: 121 ETVARESHKKHSVNAHVVKEAVLQAIRN 148
           + V     +  +++AHVVK+AV+QAI+N
Sbjct: 120 QAVGENEEQVETIDAHVVKQAVVQAIKN 147


>Glyma14g05870.1 
          Length = 156

 Score =  169 bits (427), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 110/148 (74%), Gaps = 1/148 (0%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTESS 60
           M S+E++R AL   LQ LR  TNS A+NK SII DASKYIE+LKQKVE LN E+   E+S
Sbjct: 1   MVSKEQKRAALHEKLQHLRSITNSHALNKTSIIVDASKYIEKLKQKVEILNQEIASAETS 60

Query: 61  TTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQL 120
           +   + LPMV+V+TLEKGFLI V   K C G+LVSILEAFEE++L V++AR SC DTF+ 
Sbjct: 61  SVH-NPLPMVTVETLEKGFLINVFSAKGCSGLLVSILEAFEEMRLTVLEARVSCTDTFRF 119

Query: 121 ETVARESHKKHSVNAHVVKEAVLQAIRN 148
           + V     +  +++AHVV++AV+QAI+N
Sbjct: 120 QAVGENEEQAETIDAHVVQQAVVQAIKN 147


>Glyma11g35850.1 
          Length = 157

 Score =  156 bits (395), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 82/150 (54%), Positives = 106/150 (70%), Gaps = 3/150 (2%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTESS 60
           M SRE++R AL   LQ LR  TNS A+NK SII DASKYIEELKQKVE LN  +   ++S
Sbjct: 1   MVSREQKRAALHEKLQLLRSITNSHALNKTSIIIDASKYIEELKQKVERLNQHVANAQTS 60

Query: 61  TTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQL 120
           + Q + LPMV+V+TLEKGFLI V   K+CPG+LVSILE+FEE+ L+V++AR +C DTF+ 
Sbjct: 61  SDQ-NTLPMVTVETLEKGFLINVYSAKTCPGLLVSILESFEEIGLNVLEARVTCTDTFRF 119

Query: 121 ETVA--RESHKKHSVNAHVVKEAVLQAIRN 148
             V    E      ++A  VK+ + QAI+N
Sbjct: 120 HAVGGKNEEQGDEGIDAQTVKQELGQAIKN 149


>Glyma18g02560.1 
          Length = 157

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/150 (54%), Positives = 108/150 (72%), Gaps = 3/150 (2%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTESS 60
           M SRE++R  L   LQ LR  TNS+A++K SII DASKYIEELK+KVE LN ++   ++S
Sbjct: 1   MVSREQKRATLNEKLQLLRSITNSNALDKTSIIIDASKYIEELKEKVERLNQDVANAQTS 60

Query: 61  TTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQL 120
           + Q + LPMV+V+TLEKGFLI V   KSCPG+LVSILE+FEE+ L V++AR +C+DTF+ 
Sbjct: 61  SDQ-NTLPMVTVETLEKGFLINVFSAKSCPGLLVSILESFEEMGLHVLEARVTCKDTFRF 119

Query: 121 ETVA--RESHKKHSVNAHVVKEAVLQAIRN 148
             V    E      ++A  VK+A+ QAI+N
Sbjct: 120 HAVGGKNEEQGDEDIDAQAVKQAMGQAIKN 149


>Glyma01g32130.3 
          Length = 140

 Score =  150 bits (378), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 85/100 (85%), Gaps = 1/100 (1%)

Query: 27  VNKASIIADASKYIEELKQKVEDLNSELGVTESSTTQIDELPMVSVKTLEKGFLIQVLLE 86
           VNKASII DA++YIEELKQKV+ LNSELG  ESS +Q DELPMV+V+TLE+GFLI V  E
Sbjct: 32  VNKASIIVDATRYIEELKQKVDGLNSELGTAESSISQ-DELPMVTVETLERGFLINVFSE 90

Query: 87  KSCPGMLVSILEAFEELQLDVIDARASCEDTFQLETVARE 126
           ++CPGML +IL+AFEEL LDV+DAR SCEDTFQLE V  E
Sbjct: 91  RNCPGMLGAILDAFEELGLDVLDARVSCEDTFQLEAVGGE 130


>Glyma14g38130.1 
          Length = 164

 Score =  120 bits (301), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 96/149 (64%), Gaps = 3/149 (2%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNS-ELGVTES 59
           M SR  +R AL  ++QQLR  TNS A  K S+I DASKYI  LKQK+++LN   +   + 
Sbjct: 6   MVSRVHKRTALYRSIQQLRSITNSHARRKTSVILDASKYIRGLKQKLQELNQLAVAAAQK 65

Query: 60  STTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQ 119
                  +PM+ V+  E+GF+I+VL ++SC G+L  ILEAFE L L+V+ ARASC ++F 
Sbjct: 66  DIEYGPVMPMLKVEPQEEGFMIKVLSQRSCLGLLAFILEAFERLGLEVLQARASCVESFS 125

Query: 120 LET--VARESHKKHSVNAHVVKEAVLQAI 146
           LE   +  ++   H V+A VV++ V QAI
Sbjct: 126 LEAFGIKEKNDDTHRVDAQVVEQVVSQAI 154


>Glyma11g29830.1 
          Length = 184

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 96/152 (63%), Gaps = 4/152 (2%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGV-TES 59
           M SR  +R+A+   LQ LR    S++  KAS++ + S YI+ LKQK+E+LN  L V T  
Sbjct: 26  MVSRVHKRIAMYRNLQLLRSIRYSNSRLKASVLLELSDYIQGLKQKLEELNQLLTVATAR 85

Query: 60  STTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQ 119
                D +P + V+T E+ F+I+VL E SC G+LV ILEAFEE+ LDV+ AR SC D+F 
Sbjct: 86  KIADYDPMPKLEVETQEEAFVIKVLSESSCQGLLVFILEAFEEMGLDVLQARVSCADSFS 145

Query: 120 LETVARESHKK---HSVNAHVVKEAVLQAIRN 148
           LE +          H+++A +V++ V QAI+N
Sbjct: 146 LEAIGNNKENNEDTHTLDAQLVEQVVSQAIQN 177


>Glyma02g39960.1 
          Length = 158

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 94/150 (62%), Gaps = 2/150 (1%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTESS 60
           M SR  +R A+   +QQLR  TNS A  K S+I DASKYI  LKQK+++LN         
Sbjct: 1   MVSRVHKRTAVYRRIQQLRSITNSHARRKTSVILDASKYIRGLKQKLQELNQLAVAATQK 60

Query: 61  TTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQL 120
             +   +PM+ V+  E+G+LI+VL ++SC G+L  ILEAFE L L V+ ARASC ++F L
Sbjct: 61  DIEYGPMPMLKVEQQEEGYLIKVLSQRSCQGLLAFILEAFERLGLVVLQARASCVESFCL 120

Query: 121 ETVA-RESHK-KHSVNAHVVKEAVLQAIRN 148
           E    +ES++    V+  VV++ V +AI +
Sbjct: 121 EAFGIKESNEDTRLVDTQVVEQVVSKAIND 150


>Glyma11g29830.2 
          Length = 156

 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/125 (47%), Positives = 81/125 (64%), Gaps = 1/125 (0%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGV-TES 59
           M SR  +R+A+   LQ LR    S++  KAS++ + S YI+ LKQK+E+LN  L V T  
Sbjct: 26  MVSRVHKRIAMYRNLQLLRSIRYSNSRLKASVLLELSDYIQGLKQKLEELNQLLTVATAR 85

Query: 60  STTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQ 119
                D +P + V+T E+ F+I+VL E SC G+LV ILEAFEE+ LDV+ AR SC D+F 
Sbjct: 86  KIADYDPMPKLEVETQEEAFVIKVLSESSCQGLLVFILEAFEEMGLDVLQARVSCADSFS 145

Query: 120 LETVA 124
           LE + 
Sbjct: 146 LEAIG 150


>Glyma18g06270.1 
          Length = 148

 Score =  103 bits (256), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 11/150 (7%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADASKYIEELKQKVEDLNSELGVTESS 60
           M SR  +R A+   L  LR    S +V         S YI+ LKQK+E+LN     T   
Sbjct: 1   MVSRVHKRTAMYRNLHLLRSIRYSHSV---------SDYIQGLKQKLEELNQLTVATARK 51

Query: 61  TTQIDELPMVSVKTLEKGFLIQVLLEKSCPGMLVSILEAFEELQLDVIDARASCEDTFQL 120
               D +P V V+T E+GF+I+VL E SC G+LV ILEAFEEL LDV+ AR SC  +F L
Sbjct: 52  IVDYDPMPKVEVETQEEGFVIKVLSESSCQGLLVFILEAFEELGLDVLQARVSCAHSFSL 111

Query: 121 ETVARESHKKHS--VNAHVVKEAVLQAIRN 148
           E +  + + + +  ++A +V++ V QAI+N
Sbjct: 112 EALGNKENNEDTRPLDAQLVEQVVSQAIQN 141


>Glyma05g29300.1 
          Length = 169

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 84/154 (54%), Gaps = 11/154 (7%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASIIADA-------SKYIEELKQKVEDLNSE 53
           M  R ++R++L+  L+ +R  T S++  + S++             +E +K++ E+L + 
Sbjct: 1   MACRVQKRISLRRKLRIVRVLTCSNSAKRTSLVKSTVLRLYKLKLALETVKRQYENLLAT 60

Query: 54  LGVTESSTTQIDELPMVSVKTLEKG-FLIQVLLEKSCPGMLVSILEAFEELQLDVIDARA 112
                S +  + E   V ++ +  G F+++V  EK     LVSILEAF+E+ L+V  AR 
Sbjct: 61  RREFISLSNHVKENKDVKIEKVGAGTFMVRVTCEKG-GDNLVSILEAFDEMCLNVQQARV 119

Query: 113 SCEDTFQLETVARESHKKHSVNAHVVKEAVLQAI 146
           SCE+ F LE +A    +  +++   + EA+L+AI
Sbjct: 120 SCENGFSLEAIA--VAENQTLDVRDITEALLKAI 151


>Glyma08g12450.1 
          Length = 169

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 11/154 (7%)

Query: 1   MGSRERRRVALQHTLQQLRDATNSSAVNKASI-------IADASKYIEELKQKVEDLNSE 53
           M  R ++R++L+  L  LR  T S++  + S+       +      +E +K++ E+L + 
Sbjct: 1   MACRVQKRISLRRKLHILRVLTYSNSAKRTSLAKSTVLRLYKLKLALETVKRQYENLLAT 60

Query: 54  LGVTESSTTQIDELPMVSVKTLEKG-FLIQVLLEKSCPGMLVSILEAFEELQLDVIDARA 112
                     + E   V ++ +  G F+++V  EK     LV+IL+AF+E+ LDV  AR 
Sbjct: 61  RRECVRLLNHVKESKDVKIEKVGAGTFMVRVTCEKG-GDNLVAILKAFDEMCLDVQQARV 119

Query: 113 SCEDTFQLETVARESHKKHSVNAHVVKEAVLQAI 146
           SCE+ F LE +A    +  +++   + E +L+AI
Sbjct: 120 SCENGFFLEAIA--VAEDQTLDVRDITEVLLKAI 151