Miyakogusa Predicted Gene
- Lj1g3v2280640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2280640.1 CUFF.28787.1
(1731 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76938 similar to UniRef100_Q9LM96 Cluster: F2D10.3; n... 751 0.0
gnl|LJGI|TC80122 weakly similar to UniRef100_Q9SGQ7 Cluster: T23... 731 0.0
gnl|LJGI|TC81975 similar to UniRef100_A7P8K2 Cluster: Chromosome... 115 1e-24
gnl|LJGI|TC65437 similar to UniRef100_O23508 Cluster: Growth reg... 68 2e-10
gnl|LJGI|TC60124 weakly similar to UniRef100_A7P8K2 Cluster: Chr... 68 2e-10
>gnl|LJGI|TC76938 similar to UniRef100_Q9LM96 Cluster: F2D10.3; n=1; Arabidopsis
thaliana|Rep: F2D10.3 - Arabidopsis thaliana (Mouse-ear
cress), partial (12%)
Length = 855
Score = 751 bits (379), Expect = 0.0
Identities = 393/400 (98%)
Strand = Plus / Plus
Query: 1332 cattcgtccaaatgctnnnnnnntctaccggttgttcttgagcagaagtaatatgacttg 1391
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattcgtccaaatgctaaaaaaatctaccggttgttcttgagcagaagtaatatgacttg 60
Query: 1392 ggaagtttttgcttctggtatccgtacttttcagaaaggctttgtgggggagccaaagga 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaagtttttgcttctggtatccgtacttttcagaaaggctttgtgggggagccaaagga 120
Query: 1452 ggttagaccaggtagaggcgggtttcatgagaatccacatacctgtatatgtgaagattc 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttagaccaggtagaggcgggtttcatgagaatccacatacctgtatatgtgaagattc 180
Query: 1512 tggggctaaagtggacaaaaattctggaccaagaaaatttgggaaggatagtatacccca 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggggctaaagtggacaaaaattctggaccaagaaaatttgggaaggatagtatacccca 240
Query: 1572 gaaaaatgtagcaaacgaagaggttgatgttgaagatgacgatgacgatgacaatgatat 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaaatgtagcaaacgaagaggttgatgttgaagatgacgatgacgatgacaatgatat 300
Query: 1632 gaatgaaataccagagaaggatatgttcaatgaaacaacgtcggactatgaaactctcaa 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaatgaaataccagagaaggatatgttcaatgaaacaacgtcggactatgaaactctcaa 360
Query: 1692 ctttgaggatcctgagttggaggaaattgtgtcagattag 1731
||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctttgaggatcctgagttggaggaaattgtgtcagattag 400
>gnl|LJGI|TC80122 weakly similar to UniRef100_Q9SGQ7 Cluster: T23E18.20; n=1;
Arabidopsis thaliana|Rep: T23E18.20 - Arabidopsis
thaliana (Mouse-ear cress), partial (8%)
Length = 778
Score = 731 bits (369), Expect = 0.0
Identities = 436/448 (97%), Gaps = 9/448 (2%)
Strand = Plus / Plus
Query: 1 atggcgtttcagcggcggcgccaccaccattaccaacgctgcggccgtatgattccactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atggcgtttcagcggcggcgccaccaccattaccaacgctgcggccgtatgattccactg 395
Query: 61 atctccgccgtccccgccgctctactctttctcttcgctctcctttcctttttagctcct 120
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 396 atctccgccgtcgccgccgctctactctttctcttcgctctcctttcttttttagctcct 455
Query: 121 actccgatcgatactgatcatatgcaccaccacagacaacaatacgcctcgttcaatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 actccgatcgatactgatcatatgcaccaccacagacaacaatacgcctcgttcaatgtt 515
Query: 181 caagcggatgatgatgcgattggaaatcctgtcgatgacgcgattggaaatcctgtgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 caagcggatgatgatgcgattggaaatcctgtcgatgacgcgattggaaatcctgtgttt 575
Query: 241 cgcattccgagtgacggagggaagctaggtcgagatgtgtggagttctagaaattcggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cgcattccgagtgacggagggaagctaggtcgagatgtgtggagttctagaaattcggag 635
Query: 301 cacttccacggctgcagcaatgccagcagcaagtttccaaaagctcgagagattacgcat 360
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 636 cacttccac-gctgcagcaatgccagcagcaagtttccaaaagctcgagaga-tacgcat 693
Query: 361 ccgaatcggtatttgttgattgcaaccagtggaggcttgaatcaacaaagaactgggata 420
||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||||
Sbjct: 694 ccgaatc-gtatttgttgattgcaaccagtgga-gcttg-atcaacaaag-actgggat- 748
Query: 421 acagatgctgttgttgctgcgcgaattt 448
||||||||||| ||||||||||||||
Sbjct: 749 acagatgctgt--gtgctgcgcgaattt 774
>gnl|LJGI|TC81975 similar to UniRef100_A7P8K2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (34%)
Length = 1121
Score = 115 bits (58), Expect = 1e-24
Identities = 124/145 (85%), Gaps = 2/145 (1%)
Strand = Plus / Plus
Query: 1201 tcattttcttctcgcatggctgcactcgacttcattgtttgtgatgaaagtgatgttttt 1260
|||||||||||||||||||| ||||| || |||||| |||||||| ||||| ||||||
Sbjct: 199 tcattttcttctcgcatggcggcacttgatttcatt--ttgtgatggcagtgacgttttt 256
Query: 1261 gtgaccaataacaatggtaatatggctaaaatattagctgggcgaaggagatactttggg 1320
|| || || ||||||||||| ||||||||||| |||||||| ||||||| ||||||||
Sbjct: 257 gtcacaaacaacaatggtaacatggctaaaattttagctggaagaaggaggtactttggt 316
Query: 1321 cacaaaccaaccattcgtccaaatg 1345
|| ||||| ||||| || |||||||
Sbjct: 317 cataaacctaccatccgcccaaatg 341
>gnl|LJGI|TC65437 similar to UniRef100_O23508 Cluster: Growth regulator like protein;
n=1; Arabidopsis thaliana|Rep: Growth regulator like
protein - Arabidopsis thaliana (Mouse-ear cress),
partial (13%)
Length = 931
Score = 67.9 bits (34), Expect = 2e-10
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 379 attgcaaccagtggaggcttgaatcaacaaagaactgggataacagatgctgttgttg 436
|||||||| |||||||| |||| ||||| |||||||||||||| |||||||||||||
Sbjct: 600 attgcaacgagtggaggactgaaccaacagagaactgggataactgatgctgttgttg 657
>gnl|LJGI|TC60124 weakly similar to UniRef100_A7P8K2 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 730
Score = 67.9 bits (34), Expect = 2e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 355 acgcatccgaatcggtatttgttgattgcaaccagtggaggcttgaatcaacaaagaact 414
|||||||| |||| |||||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct: 568 acgcatccagatcgatatttgttaattgccaccagcggaggtttaaatcagcagagaaca 627
Query: 415 gggataacagatgctgttgttgctgc 440
||||||| |||||||||||||||||
Sbjct: 628 gggataatcgatgctgttgttgctgc 653