Miyakogusa Predicted Gene
- Lj1g3v1911750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1911750.1 Non Chatacterized Hit- tr|I1JUD5|I1JUD5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2609
PE=,96.49,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase, C-termina,CUFF.28144.1
(1287 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78076 homologue to UniRef100_A9SV98 Cluster: Predicte... 1029 0.0
gnl|LJGI|TC58050 homologue to UniRef100_Q9LFN6 Cluster: DEAD-box... 595 e-169
gnl|LJGI|TC70039 similar to UniRef100_Q0JM17 Cluster: DEAD-box A... 375 e-103
gnl|LJGI|TC63543 similar to UniRef100_Q0JM17 Cluster: DEAD-box A... 373 e-102
gnl|LJGI|FS325491 homologue to UniRef100_A7QIQ3 Cluster: Chromos... 176 2e-43
gnl|LJGI|FS329420 homologue to UniRef100_A7QIQ3 Cluster: Chromos... 168 5e-41
gnl|LJGI|BP062814 similar to UniRef100_A1T4C7 Cluster: Glycogen/... 52 9e-06
>gnl|LJGI|TC78076 homologue to UniRef100_A9SV98 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(40%)
Length = 822
Score = 1029 bits (519), Expect = 0.0
Identities = 519/519 (100%)
Strand = Plus / Plus
Query: 769 aagttaacccttcatggacttgtgcagcactacatcaaactgaaagaggaggagaaaaac 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aagttaacccttcatggacttgtgcagcactacatcaaactgaaagaggaggagaaaaac 64
Query: 829 cggaagttgaatgatcttcttgatgcactagactttaaccaagtagttatctttgtgaaa 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cggaagttgaatgatcttcttgatgcactagactttaaccaagtagttatctttgtgaaa 124
Query: 889 agtgtgagtagagcagctgagctggacaaactacttgtggagtgcaactttccatctata 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 agtgtgagtagagcagctgagctggacaaactacttgtggagtgcaactttccatctata 184
Query: 949 tgcattcattctggcatgtcccaggaagaaaggttaaagcgttataaaggtttcaaggag 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tgcattcattctggcatgtcccaggaagaaaggttaaagcgttataaaggtttcaaggag 244
Query: 1009 gggcatacaaggattctggtggcaacagatttggttggtagggggattgacattgagcga 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gggcatacaaggattctggtggcaacagatttggttggtagggggattgacattgagcga 304
Query: 1069 gtcaatatcgttataaattatgacatgcctgattctgctgacacatatttacacagggtt 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtcaatatcgttataaattatgacatgcctgattctgctgacacatatttacacagggtt 364
Query: 1129 ggccgagctggaagatttggcaccaaaggccttgcaatcacatttgtttcatgttctgct 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggccgagctggaagatttggcaccaaaggccttgcaatcacatttgtttcatgttctgct 424
Query: 1189 gacgtcgatgttctaaacaatgtccagtcaaggtttgaggtggatataaagcagcttcct 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gacgtcgatgttctaaacaatgtccagtcaaggtttgaggtggatataaagcagcttcct 484
Query: 1249 gagcagattgatacctctacctacatgccatcgtagatg 1287
|||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gagcagattgatacctctacctacatgccatcgtagatg 523
>gnl|LJGI|TC58050 homologue to UniRef100_Q9LFN6 Cluster: DEAD-box ATP-dependent RNA
helicase 56; n=1; Arabidopsis thaliana|Rep: DEAD-box
ATP-dependent RNA helicase 56 - Arabidopsis thaliana
(Mouse-ear cress), partial (98%)
Length = 1731
Score = 595 bits (300), Expect = e-169
Identities = 837/1016 (82%)
Strand = Plus / Plus
Query: 160 aaaccagagcttcttagggctattgtggactcgggatttgagcatccttctgaagtgcaa 219
||||||||||||||| | |||||||| || || ||||||||||||||||| |||||||||
Sbjct: 245 aaaccagagcttcttcgagctattgtagattctggatttgagcatccttcagaagtgcaa 304
Query: 220 catgagtgcatccctcaagcaatccttggaatggatgtaatctgccaagctaaatctgga 279
||||| ||||||||||||||||| | ||||||||||| ||||||||||| ||||||||
Sbjct: 305 catgaatgcatccctcaagcaattttaggaatggatgttatctgccaagcaaaatctggg 364
Query: 280 atggggaagactgctgtcttcgttctctcgagtttgcaacagattgatcccgttccaggc 339
||||| ||||||||||| || ||||| || | || || |||||||| ||||| ||
Sbjct: 365 atgggaaagactgctgtgtttgttctgtcatcacttcagcaaattgatcctgttcctggt 424
Query: 340 caagtttctgcactggttctttgtcatacaagagagttagcttaccagatatgccacgag 399
|||||| | || || |||||||| || || || || ||||||| ||||| ||||| ||
Sbjct: 425 caagttgcggcccttgttctttgccacacgagggaactagcttatcagatttgccatgaa 484
Query: 400 tttgagaggtttagcacctacttacctgacctcaaggttgctgtcttttatggtggggtc 459
||||||||||| ||||| || | ||||| | || |||||||| || ||||| || |||
Sbjct: 485 tttgagaggttcagcacatatcttcctgatataaaagttgctgttttctatggaggtgtc 544
Query: 460 aacatcaaagttcacaaggatctgttgagaaatgagtgccctcatattgttgttggaacg 519
|| ||||| |||||||| || || | | ||||| || || |||||||||||||||||
Sbjct: 545 aatatcaaggttcacaaagaattgctcaagaatgaatgtccccatattgttgttggaaca 604
Query: 520 cctggaagaatacttgcattgactagggataaggacctttctttgaagaatgttaggcat 579
||||| || || ||||| ||||||| || ||||||||| |||||||||||| ||||||
Sbjct: 605 cctgggaggattcttgctctgactagagacaaggaccttggtttgaagaatgtgaggcat 664
Query: 580 ttcattttagatgaatgcgataagatgctggaatcactagacatgaggaaagatgttcaa 639
|| || | ||||| ||||| |||||||| |||||||| || ||||| | |||||| |||
Sbjct: 665 tttatacttgatgagtgcgacaagatgcttgaatcacttgatatgagaagagatgtgcaa 724
Query: 640 gacattttcaagttgactccccatgacaagcaagttatgatgttttctgcaacactcagc 699
|| |||||||| |||||||||||||| || ||||| ||||||||||| || |||||||||
Sbjct: 725 gagattttcaaattgactccccatgataaacaagtgatgatgttttcagctacactcagc 784
Query: 700 aaggaaatccgtccaatctgcaagaaatttatgcaagatcctatggaaatttatgtcgat 759
|| || || || || | |||||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 785 aaagagatacgacctgtttgcaagaagtttatgcaagatcccatggaaatatatgttgat 844
Query: 760 gatgaggccaagttaacccttcatggacttgtgcagcactacatcaaactgaaagaggag 819
|||||||||||||| ||||| ||||| ||||| |||||||| |||||| || ||||
Sbjct: 845 gatgaggccaagttgaccctccatggtcttgttcagcactatatcaaattgcaagattca 904
Query: 820 gagaaaaaccggaagttgaatgatcttcttgatgcactagactttaaccaagtagttatc 879
||||| || || ||||||||||||||||||||||| || ||||| |||||||| |||||
Sbjct: 905 gagaagaatcgtaagttgaatgatcttcttgatgctcttgacttcaaccaagttgttatt 964
Query: 880 tttgtgaaaagtgtgagtagagcagctgagctggacaaactacttgtggagtgcaacttt 939
||||| || ||||| || |||||||| || || |||| | ||||||||||| || ||
Sbjct: 965 tttgtcaagagtgtaagcagagcagcagaattgaacaagttgcttgtggagtgtaatttc 1024
Query: 940 ccatctatatgcattcattctggcatgtcccaggaagaaaggttaaagcgttataaaggt 999
|| || || ||||| |||||||| ||||| |||||||||||||| || || || ||||||
Sbjct: 1025 ccgtcaatctgcatacattctggaatgtcacaggaagaaaggttgaaacgatacaaaggt 1084
Query: 1000 ttcaaggaggggcatacaaggattctggtggcaacagatttggttggtagggggattgac 1059
||||| |||||| | ||||||||| |||||||||||||| || || |||||||||||
Sbjct: 1085 ttcaaagaggggaagcaaaggattcttgtggcaacagatttagtaggaagggggattgat 1144
Query: 1060 attgagcgagtcaatatcgttataaattatgacatgcctgattctgctgacacatattta 1119
|| || || || ||||| || ||||| ||||||||||||||||||||||| || ||| ||
Sbjct: 1145 atagaacgtgttaatatagtcataaactatgacatgcctgattctgctgatacttatcta 1204
Query: 1120 cacagggttggccgagctggaagatttggcaccaaaggccttgcaatcacatttgt 1175
||||||||||| ||||||| |||||||| ||||| || |||||||| || |||||
Sbjct: 1205 cacagggttggaagagctggcagatttgggaccaaggggcttgcaattacttttgt 1260
>gnl|LJGI|TC70039 similar to UniRef100_Q0JM17 Cluster: DEAD-box ATP-dependent RNA
helicase 56; n=1; Oryza sativa Japonica Group|Rep:
DEAD-box ATP-dependent RNA helicase 56 - Oryza sativa
subsp. japonica (Rice), partial (23%)
Length = 903
Score = 375 bits (189), Expect = e-103
Identities = 273/301 (90%)
Strand = Plus / Plus
Query: 980 ggttaaagcgttataaaggtttcaaggaggggcatacaaggattctggtggcaacagatt 1039
|||| ||||||||||| ||||| ||||||||||| ||||||||||| || ||||||||||
Sbjct: 304 ggttgaagcgttataagggttttaaggaggggcagacaaggattcttgtagcaacagatt 363
Query: 1040 tggttggtagggggattgacattgagcgagtcaatatcgttataaattatgacatgcctg 1099
||||||||||||| ||||||||||| || || ||||| || |||||||||||||||||||
Sbjct: 364 tggttggtaggggaattgacattgaacgtgtgaatatagtcataaattatgacatgcctg 423
Query: 1100 attctgctgacacatatttacacagggttggccgagctggaagatttggcaccaaaggcc 1159
||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| |
Sbjct: 424 attctgcagacacatatttgcacagggttggccgagctggaaggtttggcaccaaaggtc 483
Query: 1160 ttgcaatcacatttgtttcatgttctgctgacgtcgatgttctaaacaatgtccagtcaa 1219
||||||| ||||||||||||||| || | || || |||||||| |||||||| || || |
Sbjct: 484 ttgcaattacatttgtttcatgtgctacagatgttgatgttctcaacaatgttcaatcca 543
Query: 1220 ggtttgaggtggatataaagcagcttcctgagcagattgatacctctacctacatgccat 1279
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 544 ggtttgaggtggatataaaacagcttcctgagcagattgatacatctacctacatgccat 603
Query: 1280 c 1280
|
Sbjct: 604 c 604
>gnl|LJGI|TC63543 similar to UniRef100_Q0JM17 Cluster: DEAD-box ATP-dependent RNA
helicase 56; n=1; Oryza sativa Japonica Group|Rep:
DEAD-box ATP-dependent RNA helicase 56 - Oryza sativa
subsp. japonica (Rice), partial (23%)
Length = 884
Score = 373 bits (188), Expect = e-102
Identities = 269/296 (90%)
Strand = Plus / Plus
Query: 985 aagcgttataaaggtttcaaggaggggcatacaaggattctggtggcaacagatttggtt 1044
||||||||||| ||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 256 aagcgttataagggttttaaggaggggcagacaaggattcttgtagcaacagatttggtt 315
Query: 1045 ggtagggggattgacattgagcgagtcaatatcgttataaattatgacatgcctgattct 1104
|||||||| ||||||||||| || || ||||| || ||||||||||||||||||||||||
Sbjct: 316 ggtaggggaattgacattgaacgtgtgaatatagtcataaattatgacatgcctgattct 375
Query: 1105 gctgacacatatttacacagggttggccgagctggaagatttggcaccaaaggccttgca 1164
|| ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 376 gcagacacatatttgcacagggttggccgagctggaaggtttggcaccaaaggtcttgca 435
Query: 1165 atcacatttgtttcatgttctgctgacgtcgatgttctaaacaatgtccagtcaaggttt 1224
|| ||||||||||||||| || | || || |||||||| |||||||| || || ||||||
Sbjct: 436 attacatttgtttcatgtgctacagatgttgatgttctcaacaatgttcaatccaggttt 495
Query: 1225 gaggtggatataaagcagcttcctgagcagattgatacctctacctacatgccatc 1280
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 496 gaggtggatataaaacagcttcctgagcagattgatacatctacctacatgccatc 551
>gnl|LJGI|FS325491 homologue to UniRef100_A7QIQ3 Cluster: Chromosome chr9
scaffold_104, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_104, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (47%)
Length = 841
Score = 176 bits (89), Expect = 2e-43
Identities = 326/405 (80%)
Strand = Plus / Plus
Query: 213 agtgcaacatgagtgcatccctcaagcaatccttggaatggatgtaatctgccaagctaa 272
|||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||| ||
Sbjct: 429 agtgcaacatgaatgcatccctcaagcaattttaggaatggatgttatctgccaagcaaa 488
Query: 273 atctggaatggggaagactgctgtcttcgttctctcgagtttgcaacagattgatcccgt 332
|||||| ||||| ||||||||||| || ||||| || | || || |||||||| ||
Sbjct: 489 atctgggatgggaaagactgctgtgtttgttctgtcatcacttcagcaaattgatcctgt 548
Query: 333 tccaggccaagtttctgcactggttctttgtcatacaagagagttagcttaccagatatg 392
||| || |||||| | || || |||||||| || || || || ||||||| ||||| ||
Sbjct: 549 tcctggtcaagttgcggcccttgttctttgccacacgagggaactagcttatcagatttg 608
Query: 393 ccacgagtttgagaggtttagcacctacttacctgacctcaaggttgctgtcttttatgg 452
||| || ||||||||||| ||||| || | ||||| | || |||||||| || |||||
Sbjct: 609 ccatgaatttgagaggttcagcacatatcttcctgatataaaagttgctgttttctatgg 668
Query: 453 tggggtcaacatcaaagttcacaaggatctgttgagaaatgagtgccctcatattgttgt 512
|| ||||| ||||| |||||||| || || | | ||||| || || |||||||||||
Sbjct: 669 aggtgtcaatatcaaggttcacaaagaattgctcaagaatgaatgtccccatattgttgt 728
Query: 513 tggaacgcctggaagaatacttgcattgactagggataaggacctttctttgaagaatgt 572
|||||| ||||| || || ||||| ||||||| || ||||||||| ||||||||||||
Sbjct: 729 tggaacacctgggaggattcttgctctgactagagacaaggaccttggtttgaagaatgt 788
Query: 573 taggcatttcattttagatgaatgcgataagatgctggaatcact 617
|||||||| || | ||||| ||||| |||||||| ||||||||
Sbjct: 789 gaggcattttatacttgatgagtgcgacaagatgcttgaatcact 833
Score = 61.9 bits (31), Expect = 9e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 160 aaaccagagcttcttagggctattgtggactcgggatttgagcatccttctgaag 214
||||||||||||||| | |||||||| || || ||||||||||||||||| ||||
Sbjct: 245 aaaccagagcttcttcgagctattgtagattctggatttgagcatccttcagaag 299
>gnl|LJGI|FS329420 homologue to UniRef100_A7QIQ3 Cluster: Chromosome chr9
scaffold_104, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_104, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (34%)
Length = 627
Score = 168 bits (85), Expect = 5e-41
Identities = 214/257 (83%)
Strand = Plus / Plus
Query: 160 aaaccagagcttcttagggctattgtggactcgggatttgagcatccttctgaagtgcaa 219
||||||||||||||| | |||||||| || || ||||||||||||||||| |||||||||
Sbjct: 326 aaaccagagcttcttcgagctattgtagattctggatttgagcatccttcagaagtgcaa 385
Query: 220 catgagtgcatccctcaagcaatccttggaatggatgtaatctgccaagctaaatctgga 279
||||| ||||||||||||||||| | ||||||||||| ||||||||||| ||||||||
Sbjct: 386 catgaatgcatccctcaagcaattttaggaatggatgttatctgccaagcaaaatctggg 445
Query: 280 atggggaagactgctgtcttcgttctctcgagtttgcaacagattgatcccgttccaggc 339
||||| ||||||||||| || ||||| || | || || |||||||| ||||| ||
Sbjct: 446 atgggaaagactgctgtgtttgttctgtcatcacttcagcaaattgatcctgttcctggt 505
Query: 340 caagtttctgcactggttctttgtcatacaagagagttagcttaccagatatgccacgag 399
|||||| | || || |||||||| || || || || ||||||| ||||| ||||| ||
Sbjct: 506 caagttgcggcccttgttctttgccacacgagggaactagcttatcagatttgccatgaa 565
Query: 400 tttgagaggtttagcac 416
||||||||||| |||||
Sbjct: 566 tttgagaggttcagcac 582
>gnl|LJGI|BP062814 similar to UniRef100_A1T4C7 Cluster: Glycogen/starch/alpha-glucan
phosphorylases; n=1; Mycobacterium vanbaalenii
PYR-1|Rep:, partial (1%)
Length = 509
Score = 52.0 bits (26), Expect = 9e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1222 tttgaggtggatataaagcagcttcctgagcagattgatacctctaccta 1271
||||||||||||||||| || |||| ||||||||||| ||| |||||||
Sbjct: 488 tttgaggtggatataaaacatcttcttgagcagattgttacagctaccta 439