Miyakogusa Predicted Gene

Lj1g3v1798870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1798870.1 Non Characterized Hit- tr|I3SNG4|I3SNG4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.52,0,UNCHARACTERIZED,NULL; NADH-UBIQUINONE OXIDOREDUCTASE 39
KDA SUBUNIT-RELATED,NULL; NAD_binding_10,NUL,CUFF.27966.1
         (282 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g105660.1 | NAD(P)-binding rossmann-fold protein | HC | ch...   450   e-127
Medtr5g029260.1 | rossmann-fold NAD(P)-binding domain protein | ...   174   8e-44

>Medtr3g105660.1 | NAD(P)-binding rossmann-fold protein | HC |
           chr3:48737521-48731447 | 20130731
          Length = 286

 Score =  450 bits (1158), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/266 (82%), Positives = 237/266 (89%), Gaps = 6/266 (2%)

Query: 19  NATAV----RNLCTEPNKVDEPFKVEEAETVNVPPPPTEKLLVLGGNGFVGSHVCREALN 74
           NA AV    R+ CT+ NK+DEPFKVEEAETV  PPPPTEKLLVLGGNGFVGSHVCREALN
Sbjct: 20  NAMAVSINGRSFCTDSNKIDEPFKVEEAETV--PPPPTEKLLVLGGNGFVGSHVCREALN 77

Query: 75  HGLSVASLSRSGKSSLHDSWATDVIWYKGNLLSTDSLKEALNGVTAVISCVGGFGSNSYM 134
           HGLSVASLSRSGKSSLHDSWAT+VIWYKGNLLST+SLKEALNGVTAVISCVGGFGSNS M
Sbjct: 78  HGLSVASLSRSGKSSLHDSWATNVIWYKGNLLSTESLKEALNGVTAVISCVGGFGSNSSM 137

Query: 135 YKINGTANINAIRAASDQGVKRFVYISAADFGVVNYLLQGYYEGKRAAETELLTRFPYGG 194
           YKINGTANINAIRAAS+QGVKRF+YISAADFGVVNYLLQGYYEGKRAAETELLT+FPYGG
Sbjct: 138 YKINGTANINAIRAASEQGVKRFIYISAADFGVVNYLLQGYYEGKRAAETELLTKFPYGG 197

Query: 195 VILRPGFIHGTRTAGSMKIPLGVIGSPLEMVLQHAKPLTQIPLIGPLLTPPXXXXXXXXX 254
           +ILRPGFI+GTR+ GSMKIPLG++GSPLEMVLQH   LTQIPL+GPLLTPP         
Sbjct: 198 IILRPGFIYGTRSVGSMKIPLGIVGSPLEMVLQHTTALTQIPLVGPLLTPPVNVTAVAKV 257

Query: 255 XXXXXTEPVFPPGILDVYGIQRYSQQ 280
                T+PVFPPGI+DV+GIQRYSQ 
Sbjct: 258 AVRAATDPVFPPGIIDVHGIQRYSQN 283


>Medtr5g029260.1 | rossmann-fold NAD(P)-binding domain protein | HC
           | chr5:12238999-12243580 | 20130731
          Length = 302

 Score =  174 bits (441), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 133/199 (66%), Gaps = 6/199 (3%)

Query: 52  TEKLLVLGGNGFVGSHVCREALNHGLSVASLSRSGKSSLHDSWATDVIWYKGNLLSTDSL 111
           +EK++VLGGNGFVGS +C+ A++ G+ V SL+RSG+ +  DSW   V W  G++   +  
Sbjct: 68  SEKIVVLGGNGFVGSAICKAAVSKGIEVISLNRSGRPTYSDSWIDQVTWISGDVFYVN-W 126

Query: 112 KEALNGVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYL 171
            E L G TAV+S +GGFGS   M KING AN+ A+ AA++ G+ +F+ IS  D+ + ++L
Sbjct: 127 DEVLPGATAVVSTLGGFGSEEQMSKINGEANVVAVNAANEYGIPKFILISVHDYNLPSFL 186

Query: 172 LQ-GYYEGKRAAETELLTRFPYGGVILRPGFIHGTRTAGSMKIPLGVIGSPLEMVLQ--- 227
           L  GY+ GKR AE+E+L++FP  G++LRPGFI+G R     +IPL ++G P E +L+   
Sbjct: 187 LSSGYFTGKRKAESEVLSKFPSSGIVLRPGFIYGKRRVDGFEIPLDLVGEPAERILKSVE 246

Query: 228 -HAKPLTQIPLIGPLLTPP 245
              KPL+ +P    LL PP
Sbjct: 247 NFTKPLSALPASDLLLAPP 265