Miyakogusa Predicted Gene

Lj1g3v1798870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1798870.1 Non Chatacterized Hit- tr|I3SNG4|I3SNG4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.52,0,UNCHARACTERIZED,NULL; NADH-UBIQUINONE OXIDOREDUCTASE 39
KDA SUBUNIT-RELATED,NULL; NAD_binding_10,NUL,CUFF.27966.1
         (282 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10730.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   407   e-114
AT5G15910.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   274   5e-74
AT1G32220.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   182   2e-46

>AT5G10730.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr5:3390822-3392947 REVERSE LENGTH=287
          Length = 287

 Score =  407 bits (1045), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/284 (73%), Positives = 241/284 (84%), Gaps = 4/284 (1%)

Query: 1   MRTLVSRLIHSTPSISRLNATAV----RNLCTEPNKVDEPFKVEEAETVNVPPPPTEKLL 56
           MRT+VSRLI    S+S++   +     R L T+ NK+DEPF VEEAETV+VPPPPTEKLL
Sbjct: 1   MRTIVSRLIRYQSSLSQIRFVSASGGGRYLSTDSNKIDEPFNVEEAETVHVPPPPTEKLL 60

Query: 57  VLGGNGFVGSHVCREALNHGLSVASLSRSGKSSLHDSWATDVIWYKGNLLSTDSLKEALN 116
           VLGGNGFVGSHVC+EAL+ GLSV+SLSRSG+SSL +SWA+ V W++GNLLS+D LK+AL 
Sbjct: 61  VLGGNGFVGSHVCKEALDRGLSVSSLSRSGRSSLQESWASRVTWHQGNLLSSDLLKDALE 120

Query: 117 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYLLQGYY 176
           GVT+VISCVGGFGSNSYMYKINGTANINAIRAAS++GVKRFVYISAADFG+ NYLL+GYY
Sbjct: 121 GVTSVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGLANYLLRGYY 180

Query: 177 EGKRAAETELLTRFPYGGVILRPGFIHGTRTAGSMKIPLGVIGSPLEMVLQHAKPLTQIP 236
           EGKRAAETELLTRF YGG+ILRPGFI+GTR+ GSMKIPLGV GSP+EMVLQ AKPL Q+P
Sbjct: 181 EGKRAAETELLTRFAYGGIILRPGFIYGTRSVGSMKIPLGVFGSPMEMVLQQAKPLNQLP 240

Query: 237 LIGPLLTPPXXXXXXXXXXXXXXTEPVFPPGILDVYGIQRYSQQ 280
           L+GPL TPP              T+PVFPPGI+DV+GIQRYSQQ
Sbjct: 241 LVGPLFTPPVNVESVAKVAVRAATDPVFPPGIVDVHGIQRYSQQ 284


>AT5G15910.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr5:5193207-5195202 FORWARD LENGTH=269
          Length = 269

 Score =  274 bits (701), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 142/225 (63%), Positives = 178/225 (79%), Gaps = 1/225 (0%)

Query: 54  KLLVLGGNGFVGSHVCREALNHGLSVASLSRSGKSSLHDSWATDVIWYKGNLLSTDSLKE 113
           K+LVLGGNG+VGSH+C+EAL  G SV+SLSRSG+SSLHDSW  DV W++G+LLS DSLK 
Sbjct: 43  KILVLGGNGYVGSHICKEALRQGFSVSSLSRSGRSSLHDSWVDDVTWHQGDLLSPDSLKP 102

Query: 114 ALNGVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYLLQ 173
           AL G+T+VISCVGGFGSNS M +INGTANINA++AA++QGVKRFVYISAADFGV+N L++
Sbjct: 103 ALEGITSVISCVGGFGSNSQMVRINGTANINAVKAAAEQGVKRFVYISAADFGVINNLIR 162

Query: 174 GYYEGKRAAETELLTRFPYGGVILRPGFIHGTRTAGSMKIPLGVIGSPLEMVLQHA-KPL 232
           GY+EGKRA E E+L +F   G +LRPGFIHGTR  GS+K+PL +IG+PLEMVL+   K +
Sbjct: 163 GYFEGKRATEAEILDKFGNRGSVLRPGFIHGTRQVGSIKLPLSLIGAPLEMVLKLLPKEV 222

Query: 233 TQIPLIGPLLTPPXXXXXXXXXXXXXXTEPVFPPGILDVYGIQRY 277
           T+IP+IGPLL PP               +P F  G++DVY I ++
Sbjct: 223 TKIPVIGPLLIPPVNVKSVAATAVKAAVDPEFASGVIDVYRILQH 267


>AT1G32220.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:11608038-11609591 FORWARD LENGTH=296
          Length = 296

 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 131/199 (65%), Gaps = 6/199 (3%)

Query: 52  TEKLLVLGGNGFVGSHVCREALNHGLSVASLSRSGKSSLHDSWATDVIWYKGNLLSTDSL 111
           +E+++VLGGNGFVGS +C+ A+++G+ V S+SRSG+ +  DSW   V W  G++   +  
Sbjct: 62  SERVVVLGGNGFVGSAICKAAISNGIEVVSVSRSGRPNFEDSWLDQVTWVTGDVFYLN-W 120

Query: 112 KEALNGVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYL 171
            E L G TAV+S +GGFG+   M +ING AN+ A+ AA D GV +FV I+  D+ +  ++
Sbjct: 121 DEVLLGATAVVSTIGGFGNEEQMKRINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFI 180

Query: 172 L-QGYYEGKRAAETELLTRFPYGGVILRPGFIHGTRTAGSMKIPLGVIGSPLEMVLQHA- 229
           L  GY+ GKR AE ELL+++P  GV+LRPGFI+G R    +++PL ++G PL+ +   A 
Sbjct: 181 LSNGYFTGKRNAEAELLSKYPTSGVVLRPGFIYGKRKVNGIEVPLDLVGEPLDKIYDSAE 240

Query: 230 ---KPLTQIPLIGPLLTPP 245
              +PL  +P    +L PP
Sbjct: 241 RFIRPLRSLPASDLILAPP 259