Miyakogusa Predicted Gene

Lj1g3v1788130.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1788130.1 Non Chatacterized Hit- tr|I1K8F7|I1K8F7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35953
PE,82.69,0,MS_channel,Mechanosensitive ion channel MscS; Sm-like
ribonucleoproteins,Like-Sm (LSM) domain; seg,N,CUFF.27916.1
         (1107 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66057 weakly similar to UniRef100_A7QN75 Cluster: Chr...    62   8e-09

>gnl|LJGI|TC66057 weakly similar to UniRef100_A7QN75 Cluster: Chromosome undetermined
           scaffold_131, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_131,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (23%)
          Length = 628

 Score = 61.9 bits (31), Expect = 8e-09
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 628 gatggtgttcagatggttgttgaagaaatgaatatattgacaacagt 674
           ||||||||||||||| |||| ||||| |||||||| |||||||||||
Sbjct: 2   gatggtgttcagatgattgtggaagagatgaatatcttgacaacagt 48