Miyakogusa Predicted Gene

Lj1g3v1756720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1756720.1 tr|B9GNM5|B9GNM5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_754889 PE=4
SV=1,54.02,2e-18,seg,NULL; GB DEF: CW7 PROTEIN (AT1G59520),NULL;
FAMILY NOT NAMED,NULL; DUF2045,Protein of unknown fu,CUFF.27773.1
         (392 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G59520.1 | Symbols: CW7 | CW7 | chr1:21861589-21866016 FORWAR...   491   e-139
AT1G59520.3 | Symbols: CW7 | CW7 | chr1:21861589-21866016 FORWAR...   488   e-138
AT1G59520.2 | Symbols: CW7 | CW7 | chr1:21861589-21865418 FORWAR...   439   e-123

>AT1G59520.1 | Symbols: CW7 | CW7 | chr1:21861589-21866016 FORWARD
           LENGTH=388
          Length = 388

 Score =  491 bits (1263), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/394 (62%), Positives = 289/394 (73%), Gaps = 10/394 (2%)

Query: 2   LLGDGGETPSRYELLSMVKKHSNLIGKTVVEEQDAADVEMDMRFWHDVFDLYFVRGKESR 61
           +L DG  TPSR+E+LSMVKKHS  +GKT ++EQDA+DVEMD  FWH VFD+YFVR  ESR
Sbjct: 1   MLNDGEVTPSRHEILSMVKKHSKSLGKTSLDEQDASDVEMDSNFWHGVFDVYFVRCMESR 60

Query: 62  GRQDDDLVFFVRKLGSGSYNDSETVD---PYFVRRWAPELSNLVDETSVDVDWRRSFYLN 118
            RQDDDL+FFVRKL   SY  +E  D   PYFVRRWAP+L  L+ E+  +VDWR+SFYLN
Sbjct: 61  RRQDDDLLFFVRKLSCKSYGLTENEDAPAPYFVRRWAPKLDELLGESLAEVDWRKSFYLN 120

Query: 119 LIAHTSFSVTVAICSHQVLQKHQVAQDAPLSPIYKVVKTVYASPSRVNFQLDSKKEVETS 178
           +IAHTSF+VTVAICS++ L+ +Q ++D  LSPIYKVVKTVYASPSRVNF LDSKKEVET+
Sbjct: 121 MIAHTSFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTVYASPSRVNFHLDSKKEVETT 180

Query: 179 PAYPDICFAIDDFDSTFDAVVLSEKDHCYCVVLNAHDGAAFPSQKVSNDCSTSDNSSPEV 238
           PAYP+ICFA+DDFDSTFDAVVL++KDHCYCV+LN+HDGAAFPS  V +   ++ N+ P  
Sbjct: 181 PAYPEICFAVDDFDSTFDAVVLTDKDHCYCVLLNSHDGAAFPSATVKDSSDSNTNADPRT 240

Query: 239 CTSSTKRKDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLSGGNYPGKTDRIYMRGPGGRG 298
                  KD K+TLFSGFVSYQMVR+AY+ G++RFGSLLS G+  GK DR+YMRGPGGRG
Sbjct: 241 V------KDPKVTLFSGFVSYQMVREAYEGGRNRFGSLLSLGHITGKADRLYMRGPGGRG 294

Query: 299 EVEVAVSGVTXXXXXXXXXXXXVISKKGFGLGVIXXXXXXXXXXXXXXXXXXXXXXXXNF 358
           EVEVAVSGV             + SKK   LG I                          
Sbjct: 295 EVEVAVSGVVDQSQVVLGPVSPMSSKKSIDLGSIFRKAASVASVAAKHAIAAATASYDE- 353

Query: 359 DEMIPLKCSLMSISLPWEHIAHDLLFKGAPPVNM 392
           DEM PLKC LMSISLPW+ IAHDLLFK  PPVNM
Sbjct: 354 DEMFPLKCCLMSISLPWDTIAHDLLFKATPPVNM 387


>AT1G59520.3 | Symbols: CW7 | CW7 | chr1:21861589-21866016 FORWARD
           LENGTH=388
          Length = 388

 Score =  488 bits (1256), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/394 (61%), Positives = 288/394 (73%), Gaps = 10/394 (2%)

Query: 2   LLGDGGETPSRYELLSMVKKHSNLIGKTVVEEQDAADVEMDMRFWHDVFDLYFVRGKESR 61
           +L DG  TPSR+E+LSMVKKHS  +GKT ++EQDA+DVEMD  FWH VFD+YFVR  ESR
Sbjct: 1   MLNDGEVTPSRHEILSMVKKHSKSLGKTSLDEQDASDVEMDSNFWHGVFDVYFVRCMESR 60

Query: 62  GRQDDDLVFFVRKLGSGSYNDSETVD---PYFVRRWAPELSNLVDETSVDVDWRRSFYLN 118
            RQDDDL+FFVRKL   SY  +E  D   PYFVRRWAP+L  L+ E+  +VDWR+SFYLN
Sbjct: 61  RRQDDDLLFFVRKLSCKSYGLTENEDAPAPYFVRRWAPKLDELLGESLAEVDWRKSFYLN 120

Query: 119 LIAHTSFSVTVAICSHQVLQKHQVAQDAPLSPIYKVVKTVYASPSRVNFQLDSKKEVETS 178
           +IAHTSF+VTVAICS++ L+ +Q ++D  LSPIYKVVKTVYASPSRVNF LDSKK +ET+
Sbjct: 121 MIAHTSFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTVYASPSRVNFHLDSKKAMETT 180

Query: 179 PAYPDICFAIDDFDSTFDAVVLSEKDHCYCVVLNAHDGAAFPSQKVSNDCSTSDNSSPEV 238
           PAYP+ICFA+DDFDSTFDAVVL++KDHCYCV+LN+HDGAAFPS  V +   ++ N+ P  
Sbjct: 181 PAYPEICFAVDDFDSTFDAVVLTDKDHCYCVLLNSHDGAAFPSATVKDSSDSNTNADPRT 240

Query: 239 CTSSTKRKDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLSGGNYPGKTDRIYMRGPGGRG 298
                  KD K+TLFSGFVSYQMVR+AY+ G++RFGSLLS G+  GK DR+YMRGPGGRG
Sbjct: 241 V------KDPKVTLFSGFVSYQMVREAYEGGRNRFGSLLSLGHITGKADRLYMRGPGGRG 294

Query: 299 EVEVAVSGVTXXXXXXXXXXXXVISKKGFGLGVIXXXXXXXXXXXXXXXXXXXXXXXXNF 358
           EVEVAVSGV             + SKK   LG I                          
Sbjct: 295 EVEVAVSGVVDQSQVVLGPVSPMSSKKSIDLGSIFRKAASVASVAAKHAIAAATASYDE- 353

Query: 359 DEMIPLKCSLMSISLPWEHIAHDLLFKGAPPVNM 392
           DEM PLKC LMSISLPW+ IAHDLLFK  PPVNM
Sbjct: 354 DEMFPLKCCLMSISLPWDTIAHDLLFKATPPVNM 387


>AT1G59520.2 | Symbols: CW7 | CW7 | chr1:21861589-21865418 FORWARD
           LENGTH=319
          Length = 319

 Score =  439 bits (1129), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/309 (68%), Positives = 253/309 (81%), Gaps = 9/309 (2%)

Query: 2   LLGDGGETPSRYELLSMVKKHSNLIGKTVVEEQDAADVEMDMRFWHDVFDLYFVRGKESR 61
           +L DG  TPSR+E+LSMVKKHS  +GKT ++EQDA+DVEMD  FWH VFD+YFVR  ESR
Sbjct: 1   MLNDGEVTPSRHEILSMVKKHSKSLGKTSLDEQDASDVEMDSNFWHGVFDVYFVRCMESR 60

Query: 62  GRQDDDLVFFVRKLGSGSYNDSETVD---PYFVRRWAPELSNLVDETSVDVDWRRSFYLN 118
            RQDDDL+FFVRKL   SY  +E  D   PYFVRRWAP+L  L+ E+  +VDWR+SFYLN
Sbjct: 61  RRQDDDLLFFVRKLSCKSYGLTENEDAPAPYFVRRWAPKLDELLGESLAEVDWRKSFYLN 120

Query: 119 LIAHTSFSVTVAICSHQVLQKHQVAQDAPLSPIYKVVKTVYASPSRVNFQLDSKKEVETS 178
           +IAHTSF+VTVAICS++ L+ +Q ++D  LSPIYKVVKTVYASPSRVNF LDSKKEVET+
Sbjct: 121 MIAHTSFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTVYASPSRVNFHLDSKKEVETT 180

Query: 179 PAYPDICFAIDDFDSTFDAVVLSEKDHCYCVVLNAHDGAAFPSQKVSNDCSTSDNSSPEV 238
           PAYP+ICFA+DDFDSTFDAVVL++KDHCYCV+LN+HDGAAFPS  V +   ++ N+ P  
Sbjct: 181 PAYPEICFAVDDFDSTFDAVVLTDKDHCYCVLLNSHDGAAFPSATVKDSSDSNTNADPRT 240

Query: 239 CTSSTKRKDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLSGGNYPGKTDRIYMRGPGGRG 298
                  KD K+TLFSGFVSYQMVR+AY+ G++RFGSLLS G+  GK DR+YMRGPGGRG
Sbjct: 241 V------KDPKVTLFSGFVSYQMVREAYEGGRNRFGSLLSLGHITGKADRLYMRGPGGRG 294

Query: 299 EVEVAVSGV 307
           EVEVAVSGV
Sbjct: 295 EVEVAVSGV 303