Miyakogusa Predicted Gene
- Lj1g3v1756720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1756720.1 tr|B9GNM5|B9GNM5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_754889 PE=4
SV=1,54.02,2e-18,seg,NULL; GB DEF: CW7 PROTEIN (AT1G59520),NULL;
FAMILY NOT NAMED,NULL; DUF2045,Protein of unknown fu,CUFF.27773.1
(1182 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80519 similar to UniRef100_A7NUB8 Cluster: Chromosome... 1088 0.0
gnl|LJGI|TC73968 similar to UniRef100_A7NUB8 Cluster: Chromosome... 969 0.0
gnl|LJGI|FS335064 similar to UniRef100_A7Q023 Cluster: Chromosom... 84 2e-15
>gnl|LJGI|TC80519 similar to UniRef100_A7NUB8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 662
Score = 1088 bits (549), Expect = 0.0
Identities = 555/557 (99%)
Strand = Plus / Plus
Query: 626 tagtccttaacgcacatgacggagcagcatttcctagtcaaaaggtgtcaaatgattgca 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagtccttaacgcacatgacggagcagcatttcctagtcaaaaggtgtcaaatgattgca 60
Query: 686 gtactagtgataactcctccccggaagtttgtactagttctactaagagaaaagatacca 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtactagtgataactcctccccggaagtttgtactagttctactaagagaaaagatacca 120
Query: 746 agctgacccttttctcaggatttgtcagctatcagatggttcgagatgcatatgatgctg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctgacccttttctcaggatttgtcagctatcagatggttcgagatgcatatgatgctg 180
Query: 806 gtaaatctcgatttgggagccttttatcaggaggcaattatcctggaaaaacagacagga 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtaaatctcgatttgggagccttttatcaggaggcaattatcctggaaaaacagacagga 240
Query: 866 tttacatgagaggacctggaggccgaggggaagttgaagtagccgtttctggtgttacag 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttacatgagaggacctggaggccgaggggaagttgaagtagccgtttctggtgttacag 300
Query: 926 atcaaagccagcaggactcagatccatcttctccagttatatcaaagaaagggtttgggc 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcaaagccagcaggactcagatccatcttctccagttatatcaaagaaagggtttgggc 360
Query: 986 tcggtgtaattgtccgcagagcagcatccgttgcatcagtagcagcaagacatgcttatg 1045
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 361 tcggtgtaattgcccgcagagcagcatccgttgcatcagtaacagcaagacatgcttatg 420
Query: 1046 cagctgcttctgcctctagctcaaattttgatgaaatgatacccttgaaatgtagcttaa 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagctgcttctgcctctagctcaaattttgatgaaatgatacccttgaaatgtagcttaa 480
Query: 1106 tgtccatatcgttgccctgggaacatatagcacatgatcttctgtttaagggagctcctc 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtccatatcgttgccctgggaacatatagcacatgatcttctgtttaagggagctcctc 540
Query: 1166 cggtaaacatgtgacca 1182
|||||||||||||||||
Sbjct: 541 cggtaaacatgtgacca 557
>gnl|LJGI|TC73968 similar to UniRef100_A7NUB8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 539
Score = 969 bits (489), Expect = 0.0
Identities = 489/489 (100%)
Strand = Plus / Plus
Query: 1 atgcttctcggcgacggaggcgaaactccctcaaggtatgaattattgagcatggtgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atgcttctcggcgacggaggcgaaactccctcaaggtatgaattattgagcatggtgaag 110
Query: 61 aagcactccaatttgatagggaaaacggttgttgaggagcaggatgctgctgatgtcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aagcactccaatttgatagggaaaacggttgttgaggagcaggatgctgctgatgtcgaa 170
Query: 121 atggatatgaggttttggcatgatgtatttgatttgtatttcgtccgtggcaaggaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggatatgaggttttggcatgatgtatttgatttgtatttcgtccgtggcaaggaatct 230
Query: 181 aggggacgccaagacgatgatctcgttttctttgtcagaaaattgggttcaggttcctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aggggacgccaagacgatgatctcgttttctttgtcagaaaattgggttcaggttcctat 290
Query: 241 aatgattcagagactgttgatccttattttgtacgcaggtgggctcctgagttgagcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aatgattcagagactgttgatccttattttgtacgcaggtgggctcctgagttgagcaac 350
Query: 301 ttagttgacgaaacttctgtagatgtggattggaggcgttcattttacttgaatttaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttagttgacgaaacttctgtagatgtggattggaggcgttcattttacttgaatttaatt 410
Query: 361 gctcatacatcatttagtgtaactgttgcaatttgcagtcaccaggttcttcagaaacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gctcatacatcatttagtgtaactgttgcaatttgcagtcaccaggttcttcagaaacac 470
Query: 421 caagttgcgcaggatgcacctttatctcctatatataaggttgtgaaaactgtttatgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 caagttgcgcaggatgcacctttatctcctatatataaggttgtgaaaactgtttatgca 530
Query: 481 tctccaagt 489
|||||||||
Sbjct: 531 tctccaagt 539
>gnl|LJGI|FS335064 similar to UniRef100_A7Q023 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 649
Score = 83.8 bits (42), Expect = 2e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 17 gaggcgaaactccctcaaggtatgaattattgagcatggtgaagaagcactccaatttga 76
|||| ||||| |||||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 254 gaggtgaaaccccctcaaggtatgagtttttgagcatggtgaagaagcactcgaatttga 313
Query: 77 ta 78
||
Sbjct: 314 ta 315