Miyakogusa Predicted Gene

Lj1g3v1538690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1538690.1 tr|G7J4K4|G7J4K4_MEDTR Neurobeachin OS=Medicago
truncatula GN=MTR_3g100060 PE=4 SV=1,85.19,0,seg,NULL,CUFF.27570.1
         (495 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g100060.1 | BEACH domain LvsC-like protein, putative | HC ...   794   0.0  

>Medtr3g100060.1 | BEACH domain LvsC-like protein, putative | HC |
            chr3:45964613-45936555 | 20130731
          Length = 3254

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/488 (79%), Positives = 418/488 (85%), Gaps = 1/488 (0%)

Query: 1    MGRSRSILESQRKIRMQPIFLAISDRLFSFPQTDNLCATLFDVLLGGASPKQVLQRHNHL 60
            MGRS+SI E+ RKIRMQPIFLAISDRLFSFPQT+NLCATLFDVLLGGASPKQVLQRH+HL
Sbjct: 1666 MGRSKSISENYRKIRMQPIFLAISDRLFSFPQTENLCATLFDVLLGGASPKQVLQRHSHL 1725

Query: 61   ERVRSKGSSSHFLLPQMLPTIFRYLSGCEDASARIKXXXXXXXXXXSNASNVEAFMEYGW 120
            ERV+SKGSSSHFLLPQML  IFRYLSGCED  ARIK          SNASN+EAFMEYGW
Sbjct: 1726 ERVKSKGSSSHFLLPQMLLLIFRYLSGCEDTDARIKIIRDILDLLDSNASNIEAFMEYGW 1785

Query: 121  NAWLTSSIKLGVLKDNEAKLPNQGDSGMDEXXXXXXXXXXXXCHYLHSVKGGWQQLEETV 180
            NAWLTSS+KLGVL D   KLPN G+S MDE            CHYLHSVKGGWQQLEETV
Sbjct: 1786 NAWLTSSLKLGVLTDKNVKLPNHGNSTMDELLVVRNLFSLVLCHYLHSVKGGWQQLEETV 1845

Query: 181  NFLLMDFKEGQKSYRFFLRDIYEDLIRNMVDLSSVDNIFMSQPCRDNTLYLLKLIDEMLI 240
            NFL+M  +EG  SYRFFLRDIYED+I+N+VDLS+ DNIF+SQPCRDNTLYLLKLIDEMLI
Sbjct: 1846 NFLVMHSEEGGNSYRFFLRDIYEDVIQNLVDLSASDNIFISQPCRDNTLYLLKLIDEMLI 1905

Query: 241  SEIDKELPFFGCDFDSHLDLEIECHKEYSSALKEVLIGDADEQTSRKPRNFRQSIPNDES 300
            SEIDKELP  G + D HLDLE+ECHKEYSSALK+VLIG+ DEQTSRK +N +Q +P D++
Sbjct: 1906 SEIDKELPLLGSESDFHLDLEMECHKEYSSALKDVLIGEVDEQTSRKSQNLKQPVPCDDT 1965

Query: 301  IDEKWWNLYDKLWVVIGKMNGKGPSNTLPKSSSFAGPSLGQRARGLVESLNIPXXXXXXX 360
            I+EKWWNLYD LWVVI KMNGKGPS+ LPKSSSFAGPSLGQRARGLVESLNIP       
Sbjct: 1966 IEEKWWNLYDNLWVVISKMNGKGPSSVLPKSSSFAGPSLGQRARGLVESLNIPAAEVAAV 2025

Query: 361  XXSGG-IGTALTAKPNKNVDKAMVLRGERCPRIIYRLVILYLCKSSLERASRCVQQFTSL 419
              SGG IG ALT KPNKNVDKAMVLRGERCPRIIY LVILYLCKSSLE++SRCVQQFTSL
Sbjct: 2026 VVSGGMIGNALTPKPNKNVDKAMVLRGERCPRIIYHLVILYLCKSSLEKSSRCVQQFTSL 2085

Query: 420  LPCLLTADDEQSKSRLQLTIWVLLFVRSQYGMLDDGARFHLLSHLIRETVNIGKSMLATS 479
            LPCLLTADDEQSK RLQL IWVLLFVRSQYGMLDDGARFHLLSHLIRETVNIGKSMLATS
Sbjct: 2086 LPCLLTADDEQSKIRLQLIIWVLLFVRSQYGMLDDGARFHLLSHLIRETVNIGKSMLATS 2145

Query: 480  IVSLAITL 487
            +VS   TL
Sbjct: 2146 LVSRDDTL 2153