Miyakogusa Predicted Gene

Lj1g3v1538690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1538690.1 tr|G7J4K4|G7J4K4_MEDTR Neurobeachin OS=Medicago
truncatula GN=MTR_3g100060 PE=4 SV=1,85.19,0,seg,NULL,CUFF.27570.1
         (495 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58230.1 | Symbols:  | binding | chr1:21566331-21578865 FORWA...   539   e-153

>AT1G58230.1 | Symbols:  | binding | chr1:21566331-21578865 FORWARD
            LENGTH=2604
          Length = 2604

 Score =  539 bits (1389), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/484 (57%), Positives = 343/484 (70%), Gaps = 7/484 (1%)

Query: 1    MGRSRSILESQRKI--RMQPIFLAISDRLFSFPQTDNLCATLFDVLLGGASPKQVLQRHN 58
            +GR++S+ +  +KI  R QPIFLA+SDRLF +PQTDNL ATLFDVLLGGASPKQVLQ+HN
Sbjct: 1022 VGRTKSLSQGHKKIGARTQPIFLAMSDRLFQYPQTDNLRATLFDVLLGGASPKQVLQKHN 1081

Query: 59   HLERVRSKGSSSHFLLPQMLPTIFRYLSGCEDASARIKXXXXXXXXXXSNASNVEAFMEY 118
             +++ RSK S+SHF LPQ+   IF +LSGC+D  AR+K          SN  NVEA ME+
Sbjct: 1082 QVDKHRSKPSNSHFFLPQIFVFIFEFLSGCKDGLARMKIISDILDLLDSNPMNVEALMEF 1141

Query: 119  GWNAWLTSSIKLGVLKDNEAKLPNQGDSGMDEXXXXXXXXXXXXCHYLHSVKGGWQQLEE 178
            GW+AWLT+S+KL V+KD  ++L N  D  ++E            CHY+ SVKGGWQQLEE
Sbjct: 1142 GWSAWLTASMKLDVIKDYRSELLNHDDLALNEQHFVRGLFCVVLCHYILSVKGGWQQLEE 1201

Query: 179  TVNFLLMDFKEGQKSYRFFLRDIYEDLIRNMVDLSSVDNIFMSQPCRDNTLYLLKLIDEM 238
            TVNF+L+  +     YR FLRD+YEDLI+ +V+LSS DNIF+S PCRDN LYLL+L+DEM
Sbjct: 1202 TVNFILLQSEHNDVPYRSFLRDLYEDLIQRLVELSSEDNIFLSHPCRDNVLYLLRLVDEM 1261

Query: 239  LISEIDKEL--PFFGCDFDSHLDLEIECHKEYSSALKEVLIGDADEQTSRKPRNFRQSIP 296
            L+ E    L  P    DF   L L++   ++ +  L E       E+ SR     +    
Sbjct: 1262 LVREFGSRLLFPAISTDFSEDL-LQLGNREDPTLGLDESFQRFLTEEISRNTECQQSCTT 1320

Query: 297  NDESI-DEKWWNLYDKLWVVIGKMNGKGPSNTLPKSSSFAGPSLGQRARGLVESLNIPXX 355
              E + +E+WWNLYD LW +I  +NG+GP    PKS +  GPS+GQRARGLVESLN+P  
Sbjct: 1321 VTELMTNERWWNLYDNLWKIICDINGRGPVKMSPKSLA-TGPSIGQRARGLVESLNVPAA 1379

Query: 356  XXXXXXXSGGIGTALTAKPNKNVDKAMVLRGERCPRIIYRLVILYLCKSSLERASRCVQQ 415
                   SGGIG+AL+ K NKNVDKAM+LRGE+CPRI++RLV LYLC SSLE+A+RCVQQ
Sbjct: 1380 EMAAVVVSGGIGSALSGKMNKNVDKAMLLRGEKCPRIVFRLVTLYLCMSSLEKATRCVQQ 1439

Query: 416  FTSLLPCLLTADDEQSKSRLQLTIWVLLFVRSQYGMLDDGARFHLLSHLIRETVNIGKSM 475
             TSLLP  L ADDEQSKSRL L I  LL+VRSQYG LDDGARFH++SHLIRETV+ GKS+
Sbjct: 1440 VTSLLPSFLAADDEQSKSRLHLFIGCLLYVRSQYGKLDDGARFHVISHLIRETVSCGKSI 1499

Query: 476  LATS 479
            LATS
Sbjct: 1500 LATS 1503