Miyakogusa Predicted Gene

Lj1g3v1420300.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1420300.2 Non Characterized Hit- tr|G7LIU5|G7LIU5_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,35.35,3e-18,SUBFAMILY NOT NAMED,NULL; WD40 REPEAT
FAMILY,NULL; coiled-coil,NULL;
WD_REPEATS_REGION,WD40-repeat-c,CUFF.27323.2
         (525 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g098600.1 | transducin/WD40 repeat protein | HC | chr3:450...   712   0.0  
Medtr8g100180.1 | transducin/WD40 repeat protein | LC | chr8:401...   511   e-145
Medtr2g436510.1 | PP1/PP2A phosphatase pleiotropic regulator PRL...    51   3e-06

>Medtr3g098600.1 | transducin/WD40 repeat protein | HC |
           chr3:45029752-45023424 | 20130731
          Length = 517

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/526 (67%), Positives = 398/526 (75%), Gaps = 13/526 (2%)

Query: 1   MDEQYESTTSREEQEEALVALIEHRTHEVKNIRKRIAYYQSQLEESEKRLHDSESKLARL 60
           M+E+    TSREEQEEALVALIEHRT EV N+R R+AY ++QL+++EKRL DSESKLARL
Sbjct: 1   MEEEDIEITSREEQEEALVALIEHRTREVNNLRHRLAYTKNQLDDAEKRLKDSESKLARL 60

Query: 61  RGPANAVSSRKNDRLDNNGIKSVKMERRSSSPVDRNEGSSKNHHQSQSKTELVIPAVAPK 120
           RG     + +  +  D+NG  +VK ERRS+SP+DRNE S K++   QSKTELVIPAV PK
Sbjct: 61  RG---QTTKKITNSDDDNGTVAVKKERRSNSPIDRNERSYKSN--KQSKTELVIPAVTPK 115

Query: 121 VSLLTMLQKSAAKSVXXXXXXXXXXXXXXXXXXRVSS--EQQNTEVXXXXXXXXXXXXXX 178
           +S      +S+ K                     V S  +QQN E               
Sbjct: 116 IS------RSSGKGSVSEVAVSSVHTSSVSGGKSVKSKIDQQNVEGKDKGTKRKFEQKEH 169

Query: 179 XXLIPMICKXXXXXXVHCQSSNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVNMWQVQ 238
             LIP+I K      VHCQSSNHISSQHKRKLRSIALCP NDQLF TSALDG+VN W+VQ
Sbjct: 170 QELIPLIRKSSSKNLVHCQSSNHISSQHKRKLRSIALCPANDQLFATSALDGLVNFWKVQ 229

Query: 239 AKGSGASRLSSTDCVSPKQRRWPEDITWHPEGHSLFSVYTADSGDSQVSVTNLNKSKGAE 298
           AKGS AS L+STDC S KQRRWPEDI WHPEG+ LFSVYTAD GDSQ+SVTN NK KG E
Sbjct: 230 AKGSSASLLNSTDCASQKQRRWPEDIAWHPEGNRLFSVYTADGGDSQISVTNWNKIKGVE 289

Query: 299 RVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHAVVLWSEQDGENTWKPKVLHRNLHS 358
           RV FLEDKPHVKGIINGIVFMPWE+TCFVTGGSDHAVVLW EQD E+ WKP+ LHRNLHS
Sbjct: 290 RVTFLEDKPHVKGIINGIVFMPWEDTCFVTGGSDHAVVLWREQDDEDKWKPRPLHRNLHS 349

Query: 359 SAVMGVAGMQQKQIVLSAGADRRIFGFDVRVGRADFKHQVDSKCMSVLPNPCDFNLFMVQ 418
           SAVMGVAGMQQKQIVLSAGADRRIFGFDV  GRA+F HQ+DSKCMSV+PNP DFNLFMVQ
Sbjct: 350 SAVMGVAGMQQKQIVLSAGADRRIFGFDVGAGRAEFTHQIDSKCMSVVPNPVDFNLFMVQ 409

Query: 419 TGTHEKQLRLYDIRLRQTELHAFGWKQESSDSQSALINQTWSPDGLYIASGSVDPVIHIF 478
           TGTHEKQLRL+DIRLR+TELHAFGWKQESS+SQSALINQ WSPDGLYI SGS DPVIHIF
Sbjct: 410 TGTHEKQLRLFDIRLRRTELHAFGWKQESSESQSALINQAWSPDGLYITSGSADPVIHIF 469

Query: 479 DIRYNSHKPSQSIRAHQKRVFKAMWXXXXXXXXXXXXXXXXGLHKI 524
           DIRYN ++PSQSI+AHQKRVF A+W                GLH +
Sbjct: 470 DIRYNLNRPSQSIKAHQKRVFGALWLQSIPLLISISSDLNIGLHTL 515


>Medtr8g100180.1 | transducin/WD40 repeat protein | LC |
           chr8:40154117-40148908 | 20130731
          Length = 511

 Score =  511 bits (1317), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 263/512 (51%), Positives = 336/512 (65%), Gaps = 38/512 (7%)

Query: 12  EEQEEALVALIEHRTHEVKNIRKRIAYYQSQLEESEKRLHDSESKLARLRGPANAVSSRK 71
           +EQEEAL+AL+ HR  +VKN+         QL+++E++  +S+SKLA  +G       +K
Sbjct: 35  QEQEEALIALVNHRCRQVKNLL-------DQLKKAEEKYRNSKSKLALFQG-------KK 80

Query: 72  NDRLDNNGIKSVKMERRSSSPVDRNEGSSKNHHQSQSKTELVIPAVAPKVSLLTMLQKSA 131
           N  L + G    K +  S+S + +NE  SK  HQS+++         PK S    L  SA
Sbjct: 81  NGSLLDAG----KTKHGSNSLIRKNETPSKILHQSKAQ------HFNPKTSQCIQLPDSA 130

Query: 132 AKSVXXXXXXXXXXXXXXXXXXRVSSEQQNTEVXXXXXXXXXXXXXXXXLIPMICKXXXX 191
              +                     +++   E+                L+ +I      
Sbjct: 131 KALINYNAGANL-------------TQRFPIELDNKGTKRKYEIKEQKYLVSLIGTSSSA 177

Query: 192 XXVHCQSSNHISSQHKRKLRSIALCPVNDQLFVTSALDGVVNMWQVQAKGSGASRLSSTD 251
             V+CQ ++ I S HK++LRS+ALCP+NDQ FVTSALDGV+ +W+VQ++G GA  LS+TD
Sbjct: 178 RSVNCQMTSSIPSLHKKRLRSLALCPLNDQHFVTSALDGVIRLWEVQSRGLGARLLSTTD 237

Query: 252 CVSPKQRRWPEDITWHPEGHSLFSVYTADSGDSQVSVTNLNKSKGAERVKFLEDKPHVKG 311
           C S +Q+RWPEDI WHPEG SLFSVY+ADS DSQVSVTN    + + +V FL+DKPHVKG
Sbjct: 238 CASAEQKRWPEDIAWHPEGKSLFSVYSADSPDSQVSVTNFKDGERSGQVNFLQDKPHVKG 297

Query: 312 IINGIVFMPWENTCFVTGGSDHAVVLWSEQDGENTWKPKVLHRNLHSSAVMGVAGMQQKQ 371
            IN IVF+PWE + FVT G+DH V+LWSE D E  WK + LHRN+H+SAVMGVAG+Q K+
Sbjct: 298 AINSIVFLPWEYSSFVTAGTDHTVMLWSEND-EKKWKSEPLHRNIHTSAVMGVAGVQHKK 356

Query: 372 IVLSAGADRRIFGFDVRVGRADFKHQVDSKCMSVLPNPCDFNLFMVQTGTHEKQLRLYDI 431
           IVLS G D+RI G++  VGR DF HQVDSKC+S+LPNP DFNLFMVQTGT EKQLRL+DI
Sbjct: 357 IVLSVGQDKRILGYNAHVGRQDFIHQVDSKCLSILPNPVDFNLFMVQTGTREKQLRLFDI 416

Query: 432 RLRQTELHAFGWKQESSDSQSALINQTWSPDGLYIASGSVDPVIHIFDIRYNSHKPSQSI 491
           RL+  E+HAFGWKQE  D+QSAL+NQ WSP+GLYI SGS DP+IHIFDIRYN H+PSQSI
Sbjct: 417 RLKLKEVHAFGWKQERRDTQSALVNQDWSPNGLYITSGSDDPLIHIFDIRYNGHEPSQSI 476

Query: 492 RAHQKRVFKAMWXXXXXXXXXXXXXXXXGLHK 523
           +AHQKRVF+AMW                G HK
Sbjct: 477 KAHQKRVFRAMWHHSRPLLISISSDSNIGFHK 508


>Medtr2g436510.1 | PP1/PP2A phosphatase pleiotropic regulator PRL1 |
           HC | chr2:14198159-14190457 | 20130731
          Length = 480

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 27/185 (14%)

Query: 323 NTCFVTGGSDHAVVLWSEQDGENTWKPKVLHRNL--HSSAVMGVAGMQQKQIVLSAGADR 380
           NT F TG +D  + +W    G       VL   L  H   V G+A   +   + SAG D+
Sbjct: 182 NTWFATGSADRTIKIWDLASG-------VLKLTLTGHIEQVRGLAISHKHTYMFSAGDDK 234

Query: 381 RIFGFDV---RVGRADFKHQVDSKCMSVLPNPCDFNLFMVQTGTHEKQLRLYDIRLRQTE 437
           ++  +D+   +V R+   H     C+++ P      + ++ TG  +   R++DIR +  +
Sbjct: 235 QVKCWDLEQNKVIRSYHGHLSGVYCLAIHP-----TIDILLTGGRDSVCRVWDIRSKM-Q 288

Query: 438 LHAFGWKQESSDSQSALINQTWSPDGLYIASGSVDPVIHIFDIRYNSHKPSQSIRAHQKR 497
           +HA       S  ++ + +    P    + +GS D  I ++D+RY   K   ++  H+K 
Sbjct: 289 IHAL------SGHENTVCSVFTRPTDPQVVTGSHDSTIKMWDLRYG--KTMSTLTNHKKS 340

Query: 498 VFKAM 502
           V +AM
Sbjct: 341 V-RAM 344