Miyakogusa Predicted Gene
- Lj1g3v1420300.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1420300.2 Non Chatacterized Hit- tr|G7LIU5|G7LIU5_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,35.35,3e-18,SUBFAMILY NOT NAMED,NULL; WD40 REPEAT
FAMILY,NULL; coiled-coil,NULL;
WD_REPEATS_REGION,WD40-repeat-c,CUFF.27323.2
(1578 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS348355 similar to UniRef100_A7PHR5 Cluster: Chromosom... 1308 0.0
gnl|LJGI|FS348399 similar to UniRef100_A7PHR5 Cluster: Chromosom... 398 e-110
gnl|LJGI|AV414798 76 7e-13
>gnl|LJGI|FS348355 similar to UniRef100_A7PHR5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 670
Score = 1308 bits (660), Expect = 0.0
Identities = 666/668 (99%)
Strand = Plus / Minus
Query: 911 aggataagcctcatgttaagggaattatcaatggtattgtcttcatgccctgggaaaaca 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aggataagcctcatgttaagggaattatcaatggtattgtcttcatgccctgggaaaaca 611
Query: 971 catgttttgttactggcggaagtgaccatgctgttgtactttggagtgagcaggatggtg 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 catgttttgttactggcggaagtgaccatgctgttgtactttggagtgagcaggatggtg 551
Query: 1031 agaacacatggaagccaaaagtattgcacagaaatcttcattcttctgctgtcatgggag 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 agaacacatggaagccaaaagtattgcacagaaatcttcattcttctgctgtcatgggag 491
Query: 1091 ttgctggtatgcagcagaagcagattgtgttatctgctggtgcagacaggagaatatttg 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttgctggtatgcagcagaagcagattgtgttatctgctggtgcagacaggagaatatttg 431
Query: 1151 ggtttgatgttcgcgtaggaagagcagatttcaaacatcaggttgatagtaaatgcatga 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggtttgatgttcgcgtaggaagagcagatttcaaacatcaggttgatagtaaatgcatga 371
Query: 1211 gtgtcctgcctaatccatgtgatttcaacttattcatggttcaaacagggactcatgaga 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtgtcctgcctaatccatgtgatttcaacttattcatggttcaaacagggactcatgaga 311
Query: 1271 agcagcttcgattatacgatattagactgaggcagacagaacttcatgcttttggatgga 1330
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 310 agcagcttcgattatacgatattagactgaggcagacagaacttcatgcctttggatgga 251
Query: 1331 agcaagaaagcagtgattctcagtcagctctgataaaccagacttggtctccagatgggc 1390
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agcaagaaagcagcgattctcagtcagctctgataaaccagacttggtctccagatgggc 191
Query: 1391 tttacatagcatctggttcagtggatcctgtgattcacatctttgatataagatataatt 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tttacatagcatctggttcagtggatcctgtgattcacatctttgatataagatataatt 131
Query: 1451 ctcacaaaccttcgcaatctataagagctcatcagaaacgagtctttaaagccatgtggc 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ctcacaaaccttcgcaatctataagagctcatcagaaacgagtctttaaagccatgtggc 71
Query: 1511 ttcagtctattcctcttctcatttccatatcatctgatctcaacattggactacacaaga 1570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ttcagtctattcctcttctcatttccatatcatctgatctcaacattggactacacaaga 11
Query: 1571 tttactag 1578
||||||||
Sbjct: 10 tttactag 3
>gnl|LJGI|FS348399 similar to UniRef100_A7PHR5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 743
Score = 398 bits (201), Expect = e-110
Identities = 417/489 (85%)
Strand = Plus / Minus
Query: 1081 gtcatgggagttgctggtatgcagcagaagcagattgtgttatctgctggtgcagacagg 1140
||||||||||||||||| |||||||||||||||||||| || |||||||| |||||||
Sbjct: 740 gtcatgggagttgctggcatgcagcagaagcagattgtattgtctgctggcaaagacagg 681
Query: 1141 agaatatttgggtttgatgttcgcgtaggaagagcagatttcaaacatcaggttgatagt 1200
| ||| | |||| |||| | ||||||| | |||||||| ||||||||||||| |
Sbjct: 680 aaaattatagggtacgatgcccatgtaggaatacaagatttcatgcatcaggttgatact 621
Query: 1201 aaatgcatgagtgtcctgcctaatccatgtgatttcaacttattcatggttcaaacaggg 1260
|||||| ||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 620 aaatgcttgagtgtcctgccaaatccatgcgatttcaatttattcatggttcaaacaggg 561
Query: 1261 actcatgagaagcagcttcgattatacgatattagactgaggcagacagaacttcatgct 1320
|||| ||| | || |||||||||| ||||| ||| || | |||||||||||||||||
Sbjct: 560 actccagagcaacaacttcgattatttgatataagatcgaagaagacagaacttcatgct 501
Query: 1321 tttggatggaagcaagaaagcagtgattctcagtcagctctgataaaccagacttggtct 1380
||||||||||||||| |||||||| |||||||||||||| || ||||| ||||||||
Sbjct: 500 tttggatggaagcaaagtagcagtgaagctcagtcagctctggtagaccaggcttggtct 441
Query: 1381 ccagatgggctttacatagcatctggttcagtggatcctgtgattcacatctttgatata 1440
|| |||| | |||||| |||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 440 cccaatggaatgtacataacatctggttcagctgatcccgtgatccacatctttgatatt 381
Query: 1441 agatataattctcacaaaccttcgcaatctataagagctcatcagaaacgagtctttaaa 1500
||||||||| |||||| ||||| ||||| ||| ||||||| ||||||||||||| | |
Sbjct: 380 agatataatggtcacaagccttcccaatccatacaagctcataagaaacgagtcttcaga 321
Query: 1501 gccatgtggcttcagtctattcctcttctcatttccatatcatctgatctcaacattgga 1560
|||||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 320 gccatgtggcttcactctgttcctcttctcgtttccatatcatctgatctcagcattggg 261
Query: 1561 ctacacaag 1569
|||||||||
Sbjct: 260 ctacacaag 252
>gnl|LJGI|AV414798
Length = 214
Score = 75.8 bits (38), Expect = 7e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 1223 atccatgtgatttcaacttattcatggttcaaacaggg 1260
||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atccatgtgatttcaacttattcatggttcaaacaggg 177