Miyakogusa Predicted Gene

Lj1g3v1379770.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1379770.2 Non Chatacterized Hit- tr|D7SZY7|D7SZY7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,74.23,6e-18,seg,NULL; coiled-coil,NULL,CUFF.27220.2
         (531 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65265 similar to UniRef100_A7PYP6 Cluster: Chromosome...   938   0.0  

>gnl|LJGI|TC65265 similar to UniRef100_A7PYP6 Cluster: Chromosome chr12 scaffold_38,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_38, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (54%)
          Length = 686

 Score =  938 bits (473), Expect = 0.0
 Identities = 512/531 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtcgtagcgtgtcacgatcgcgctcaccgtcttacagaagtagtnnnnnnnnnnnn 60
           ||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct: 27  atgggtcgtagcgtgtcacgatcgcgctcaccgtcttacagaagtagtagaagaagaaga 86

                                                                       
Query: 61  nnnnnntactctcctcctccttcttcccgaagcagcaggcggcgtcgaaggcatagaagc 120
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  agaagatactctcctcctccttcttcccgaagcagcaggcggcgtcgaaggcatagaagc 146

                                                                       
Query: 121 agaagctcttcctcacactctccttcacgcagccctactcctaaacccaaaaaagaccca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 agaagctcttcctcacactctccttcacgcagccctactcctaaacccaaaaaagaccca 206

                                                                       
Query: 181 ccaccatcaccattaaacaaaaggcgtcaacatgaggaagagttgaaacttttggaagaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccaccatcaccattaaacaaaaggcgtcaacatgaggaagagttgaaacttttggaagaa 266

                                                                       
Query: 241 gagacagcaagaagaatcgaagaagcaattcgaaaaaatgttgaggagaagcttaattca 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gagacagcaagaaaaatcgaagaagcaattcgaaaaaatgttgaggagaagcttaattca 326

                                                                       
Query: 301 gacgaagtcaggttagaaattgaaagacgtgtggcagagggtgtgaagacattatttgat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gacgaagtcaggttagaaattgaaagacgtgtggcagagggtgtgaagacattatttgat 386

                                                                       
Query: 361 gatgttgaagctcaacttggaaaagaaaaggaagatgctcttgccgaagccaggaggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gatgttgaagctcaacttggaaaagaaaaggaagatgctcttgccgaagccaggaggaaa 446

                                                                       
Query: 421 gaagagcaagctcgaaaagagcgagaagagctggataagatgcttgaagagaataggagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaagagcaagctcgaaaagagcgagaagagctggataagatgcttgaagagaataggagg 506

                                                              
Query: 481 agagtggaggagtctcaaagaagagaagctctagagcagcaaagaaaggag 531
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agagtggaggagtctcaaagaagagaagctctagagcagcaaagaaaggag 557