Miyakogusa Predicted Gene
- Lj1g3v1300570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1300570.1 Non Chatacterized Hit- tr|I1K4X9|I1K4X9_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,71.03,0,Plant
invertase/pectin methylesterase inhibi,Pectinesterase inhibitor;
Pectin lyase-like,Pectin lyas,CUFF.27119.1
(1629 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW614888 weakly similar to UniRef100_A7QB78 Cluster: Ch... 660 0.0
gnl|LJGI|TC73565 similar to UniRef100_A0ZNK0 Cluster: Pectin met... 200 2e-50
gnl|LJGI|TC81875 similar to UniRef100_Q5BMA3 Cluster: Secondary ... 70 5e-11
gnl|LJGI|TC78529 weakly similar to UniRef100_A7QB78 Cluster: Chr... 68 2e-10
>gnl|LJGI|BW614888 weakly similar to UniRef100_A7QB78 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 485
Score = 660 bits (333), Expect = 0.0
Identities = 333/333 (100%)
Strand = Plus / Plus
Query: 154 gaaatccaacaagcctgcaaggccacccgcttccctcaccaatgccgctcctctctttcc 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gaaatccaacaagcctgcaaggccacccgcttccctcaccaatgccgctcctctctttcc 212
Query: 214 gaacccaacctcctccctcctaacccaacccctctccagatcatccaatccgccgtcgca 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaacccaacctcctccctcctaacccaacccctctccagatcatccaatccgccgtcgca 272
Query: 274 atctcctcgcaaaacctccacaccgcgagaacaatgctgaaaaccatcgcggactcctcc 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atctcctcgcaaaacctccacaccgcgagaacaatgctgaaaaccatcgcggactcctcc 332
Query: 334 gctggaaaccccgcccgcaccaccgccgctcacacctgcctccacgtcctacactactcc 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gctggaaaccccgcccgcaccaccgccgctcacacctgcctccacgtcctacactactcc 392
Query: 394 catcaccgcacctccctcgccgccgacgctctcccgcgcggccggacaaaggacgcgcgc 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 catcaccgcacctccctcgccgccgacgctctcccgcgcggccggacaaaggacgcgcgc 452
Query: 454 gcctggatgagcgctgctctggcttaccagtac 486
|||||||||||||||||||||||||||||||||
Sbjct: 453 gcctggatgagcgctgctctggcttaccagtac 485
>gnl|LJGI|TC73565 similar to UniRef100_A0ZNK0 Cluster: Pectin methylesterase 2; n=1;
Pyrus communis|Rep: Pectin methylesterase 2 - Pyrus
communis (Pear), partial (18%)
Length = 531
Score = 200 bits (101), Expect = 2e-50
Identities = 266/321 (82%)
Strand = Plus / Plus
Query: 1289 actgcttgattaatggtacagaggaatatatggcattgtattatagcaaacctaaaaaac 1348
|||||||||| ||||| || ||||| || ||||||||||| | ||||| || ||| |
Sbjct: 1 actgcttgatcaatggcactgaggattacatggcattgtaccacagcaaccccaaagtgc 60
Query: 1349 acaagaactatctgggtaggccatggaaggagtattctagaacagttttcattcattcat 1408
|||||||||| |||| ||||||||||||||||| ||||| |||||||| ||||||||||
Sbjct: 61 acaagaactacttgggcaggccatggaaggagtactctaggacagtttttattcattcat 120
Query: 1409 tcttggaagaccttatcacaccacaaggttggatgccatggacaggggattttgcgctga 1468
| ||||||| || |||| || || |||||||||||||||| || || ||||| || |
Sbjct: 121 tgttggaagctctagtcactcctcagggttggatgccatggaatggtgagtttgccctca 180
Query: 1469 acacactttactatggggaattcgagaactcgggacctggttctaatttgactcagaggg 1528
| |||||||| |||||||| || ||||| || ||||| |||||| ||||| ||| |||||
Sbjct: 181 agacactttattatggggagtttgagaattctggaccaggttctgatttgtctctgaggg 240
Query: 1529 tgccctggagtagtcaggtcccggctgagcatgtgtctacatattcagtgcagagtttca 1588
| |||||||||| ||||||| ||||||||||||| |||||||||| | ||| |||||
Sbjct: 241 tttcctggagtagcaaggtccctgctgagcatgtgttgacatattcagcggagaatttca 300
Query: 1589 ttcaaggaaatgattggattc 1609
||||||| ||||||||||||
Sbjct: 301 ttcaaggtgatgattggattc 321
>gnl|LJGI|TC81875 similar to UniRef100_Q5BMA3 Cluster: Secondary cell wall-related
glycosyltransferase family 8; n=1; Populus tremula x
Populus tremuloides|Rep: Secondary cell wall-related
glycosyltransferase family 8 - Populus tremula x Populus
tremuloides, partial (21%)
Length = 1201
Score = 69.9 bits (35), Expect = 5e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1595 gaaatgattggattcaccatctcagtaattagaag 1629
|||||||||||||||||||||||||||||||||||
Sbjct: 1201 gaaatgattggattcaccatctcagtaattagaag 1167
>gnl|LJGI|TC78529 weakly similar to UniRef100_A7QB78 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 678
Score = 67.9 bits (34), Expect = 2e-10
Identities = 93/114 (81%), Gaps = 9/114 (7%)
Strand = Plus / Plus
Query: 154 gaaatccaacaagcctgcaaggccacccgcttccctcaccaatgccgctcctctctttcc 213
|||||||| |||||||||||||||||||||||||| || |||||| ||||| || ||
Sbjct: 279 gaaatccagcaagcctgcaaggccacccgcttcccccagcaatgcgaatcctccctctc- 337
Query: 214 gaacccaacctcctccctcctaacccaacccctctccagatcatccaatccgcc 267
|| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 338 --------ccacctccctcctaacccaacctctctccagctcctccaatccgcc 383